Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832570 | XP_003611115.1 | 92.909 | 1100 | 40 | 2 | 1 | 1100 | 1 | 1062 | 0.0 | 2003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832570 | G7KDD8 | 92.909 | 1100 | 40 | 2 | 1 | 1100 | 1 | 1062 | 0.0 | 2003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102750 | Msa0832570 | 0.800521 | 1.385933e-48 | -8.615850e-47 |
| Msa0105420 | Msa0832570 | 0.801509 | 8.706457e-49 | -8.615850e-47 |
| Msa0753340 | Msa0832570 | 0.915288 | 7.030360e-85 | -8.615850e-47 |
| Msa0795390 | Msa0832570 | 0.838746 | 2.394861e-57 | -8.615850e-47 |
| Msa0832570 | Msa0881020 | 0.806120 | 9.598737e-50 | -8.615850e-47 |
| Msa0832570 | Msa0881030 | 0.800613 | 1.327293e-48 | -8.615850e-47 |
| Msa0832570 | Msa0993530 | 0.811604 | 6.442586e-51 | -8.615850e-47 |
| Msa0832570 | Msa1185540 | 0.807774 | 4.289308e-50 | -8.615850e-47 |
| Msa0832570 | Msa1278840 | 0.803875 | 2.828569e-49 | -8.615850e-47 |
| Msa0832570 | Msa1318240 | 0.800511 | 1.392513e-48 | -8.615850e-47 |
| Msa0832570 | Msa1358040 | 0.993838 | 1.359205e-202 | -8.615850e-47 |
| Msa0832570 | Msa1459180 | 0.809178 | 2.151770e-50 | -8.615850e-47 |
| Msa0832570 | Msa1466460 | 0.819861 | 9.297628e-53 | -8.615850e-47 |
| Msa0276920 | Msa0832570 | 0.800651 | 1.304383e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832570 | MtrunA17_Chr5g0397721 | 92.909 | 1100 | 40 | 2 | 1 | 1100 | 1 | 1062 | 0.0 | 2003 |
| Msa0832570 | MtrunA17_Chr8g0386571 | 61.435 | 1115 | 335 | 12 | 1 | 1100 | 1 | 1035 | 0.0 | 1254 |
| Msa0832570 | MtrunA17_Chr1g0203361 | 37.018 | 778 | 419 | 16 | 1 | 771 | 1 | 714 | 1.17e-134 | 429 |
| Msa0832570 | MtrunA17_Chr1g0203361 | 70.909 | 55 | 16 | 0 | 1045 | 1099 | 798 | 852 | 9.98e-15 | 79.3 |
| Msa0832570 | MtrunA17_Chr3g0115391 | 25.890 | 730 | 431 | 20 | 1 | 672 | 1 | 678 | 2.96e-46 | 182 |
| Msa0832570 | MtrunA17_Chr1g0179821 | 25.786 | 477 | 274 | 14 | 1 | 437 | 1 | 437 | 1.61e-25 | 114 |
| Msa0832570 | MtrunA17_Chr1g0197491 | 23.060 | 464 | 308 | 14 | 1 | 434 | 25 | 469 | 5.04e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832570 | AT1G63300.1 | 46.168 | 1109 | 508 | 15 | 1 | 1100 | 1 | 1029 | 0.0 | 831 |
| Msa0832570 | AT5G41140.1 | 44.036 | 1115 | 475 | 21 | 1 | 1099 | 1 | 982 | 0.0 | 770 |
| Msa0832570 | AT5G41140.2 | 43.677 | 1115 | 472 | 20 | 1 | 1099 | 1 | 975 | 0.0 | 764 |
| Msa0832570 | AT5G52280.1 | 36.201 | 895 | 445 | 18 | 1 | 888 | 1 | 776 | 1.52e-136 | 434 |
| Msa0832570 | AT5G52280.1 | 61.905 | 63 | 24 | 0 | 1037 | 1099 | 790 | 852 | 1.10e-13 | 76.3 |
| Msa0832570 | AT1G22060.2 | 25.652 | 729 | 422 | 23 | 1 | 673 | 1 | 665 | 1.47e-41 | 167 |
| Msa0832570 | AT1G22060.1 | 25.652 | 729 | 422 | 23 | 1 | 673 | 1 | 665 | 1.47e-41 | 167 |
Find 218 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTCCTTTGACTTTATC+AGG | 0.217694 | 5_4:+5599465 | None:intergenic |
| ATCTTATGTTTCAGATATTA+AGG | 0.227236 | 5_4:+5603741 | None:intergenic |
| CTGTATCGCCGTTGCTGAAT+TGG | 0.249416 | 5_4:+5602165 | None:intergenic |
| CCTCCTCTAATCTTCTGATA+TGG | 0.253588 | 5_4:+5600672 | None:intergenic |
| AATATGTTATTCTTCCTTCT+TGG | 0.272326 | 5_4:-5598572 | Msa0832570:three_prime_UTR |
| CTCAGAGCTCGGGTTAAGTA+TGG | 0.286991 | 5_4:-5601629 | Msa0832570:CDS |
| TCTGCTCCAACATCTCTTCC+AGG | 0.286998 | 5_4:+5601167 | None:intergenic |
| CCAGCATTGAGAAGAGATTC+AGG | 0.288948 | 5_4:-5599776 | Msa0832570:CDS |
| ATGGGTTTCTAGTACCTTAA+TGG | 0.298162 | 5_4:+5600691 | None:intergenic |
| CTCAAACAAGTGTGTCTCTT+TGG | 0.299665 | 5_4:+5600994 | None:intergenic |
| TCTTTATTTCACTCTTTAGC+TGG | 0.301119 | 5_4:+5599817 | None:intergenic |
| TAGTTGGTGGAGTAGTTGTT+TGG | 0.303733 | 5_4:-5603561 | Msa0832570:five_prime_UTR |
| GTTGATACTCCCTGCGAAAT+TGG | 0.316541 | 5_4:-5601796 | Msa0832570:CDS |
| TCCGCGGCACGGGCCATAAC+TGG | 0.317067 | 5_4:+5601730 | None:intergenic |
| TAGTTGACTGAAGCTCTTCT+TGG | 0.317857 | 5_4:+5600369 | None:intergenic |
| CCTTTACAATTTGTTTCCTA+AGG | 0.319699 | 5_4:+5601467 | None:intergenic |
| AGTTGGTGGAGTAGTTGTTT+GGG | 0.320329 | 5_4:-5603560 | Msa0832570:five_prime_UTR |
| CGTTCTGTTGTTTATTGCTT+TGG | 0.325606 | 5_4:+5601867 | None:intergenic |
| AGCTTGGGGAACAAGTTAAT+AGG | 0.327660 | 5_4:-5600226 | Msa0832570:CDS |
| AGATGTTTCGTTCTTCAAAA+TGG | 0.329139 | 5_4:-5603481 | Msa0832570:CDS |
| CTCCTCTAATCTTCTGATAT+GGG | 0.332595 | 5_4:+5600673 | None:intergenic |
| GCAAGAATCAAATGCTGAAT+TGG | 0.334048 | 5_4:-5601206 | Msa0832570:CDS |
| ACGCAAAAGTGATTGTTTAG+AGG | 0.337322 | 5_4:-5598509 | Msa0832570:three_prime_UTR |
| TGTTTAACTGTTCCTGCAAT+TGG | 0.337470 | 5_4:+5600828 | None:intergenic |
| CTCCAAATGGGATGCCTCTT+GGG | 0.337850 | 5_4:+5601561 | None:intergenic |
| TGCCTCTTGGGAACTTTCCT+TGG | 0.342709 | 5_4:+5601573 | None:intergenic |
| GCTTTCTCTAATCTCTTTGT+TGG | 0.351234 | 5_4:+5602876 | None:intergenic |
| TTCGCAATGCTTCCTCGGCT+TGG | 0.354438 | 5_4:+5600567 | None:intergenic |
| TGAAACTCACATTGAGAATC+TGG | 0.362265 | 5_4:-5600762 | Msa0832570:CDS |
| CGAAACAGTCAAGTATTATC+AGG | 0.373302 | 5_4:-5602811 | Msa0832570:CDS |
| TAATAAACTAATGTTTATAA+TGG | 0.380562 | 5_4:-5598598 | Msa0832570:three_prime_UTR |
| AATGGAGGAGTGAGAAGAAT+AGG | 0.381314 | 5_4:-5603463 | Msa0832570:CDS |
| CAAATCTGAACTCGCTGCTT+TGG | 0.381316 | 5_4:-5601527 | Msa0832570:CDS |
| TTCCCAAGAGGCATCCCATT+TGG | 0.381326 | 5_4:-5601563 | Msa0832570:CDS |
| AAACCAGTTTGTTCCAGTTA+TGG | 0.383737 | 5_4:-5601743 | Msa0832570:CDS |
| ATTGAAATAACGTTCGTTGT+TGG | 0.383936 | 5_4:-5603791 | Msa0832570:five_prime_UTR |
| TCGAAAATCAGAAGAAGCTT+GGG | 0.384283 | 5_4:-5600241 | Msa0832570:CDS |
| GCTTGGGGAACAAGTTAATA+GGG | 0.389725 | 5_4:-5600225 | Msa0832570:CDS |
| GAGAAAACTCTCAGCCCTTA+TGG | 0.392278 | 5_4:+5598695 | None:intergenic |
| ATTACAAACTTAGTCTTGCT+TGG | 0.395319 | 5_4:-5599260 | Msa0832570:intron |
| CAATGCTTCCTCGGCTTGGA+TGG | 0.396921 | 5_4:+5600571 | None:intergenic |
| GAGGCATTAACAGCAGCATT+TGG | 0.397470 | 5_4:+5601703 | None:intergenic |
| TCATTTGCATTGAGAGTCTC+TGG | 0.397576 | 5_4:+5600495 | None:intergenic |
| GTGTAAGAACAGAAGGAGTT+AGG | 0.401792 | 5_4:+5603697 | None:intergenic |
| AGAGTTTCATCTCTAACTCT+TGG | 0.402659 | 5_4:+5601086 | None:intergenic |
| TCCTCATCATTCAAAAGAAA+TGG | 0.405576 | 5_4:-5599682 | Msa0832570:CDS |
| AAATTCTCTAGCTACCATTA+AGG | 0.413944 | 5_4:-5600705 | Msa0832570:CDS |
| TTGTCTGATTTCTTCGACAA+AGG | 0.415014 | 5_4:+5601285 | None:intergenic |
| AGAAGAAGTAAGAAATAGAT+TGG | 0.415538 | 5_4:-5598902 | Msa0832570:CDS |
| TTCCTTCAATGACGACAATT+CGG | 0.418972 | 5_4:+5598846 | None:intergenic |
| TCTCCAAATGGGATGCCTCT+TGG | 0.421036 | 5_4:+5601560 | None:intergenic |
| GACCGAATTGTCGTCATTGA+AGG | 0.423001 | 5_4:-5598848 | Msa0832570:CDS |
| CAGAAGATTAGAGGAGGAGA+TGG | 0.426220 | 5_4:-5600666 | Msa0832570:CDS |
| TATCAAAAGCTAGCGCGGTC+GGG | 0.426391 | 5_4:-5602641 | Msa0832570:CDS |
| AAATTGTCGGTGGGAGAATT+CGG | 0.427835 | 5_4:-5602838 | Msa0832570:CDS |
| CTGTGACCTGTTTCTCACTT+TGG | 0.434319 | 5_4:+5601330 | None:intergenic |
| ATATTTCAGGTGTTACAATC+AGG | 0.434804 | 5_4:-5602945 | Msa0832570:intron |
| GCTAGAGCAAAGCCAATTGC+AGG | 0.435772 | 5_4:-5600840 | Msa0832570:CDS |
| TGAGTCTCTCCATCTCCAAA+TGG | 0.437670 | 5_4:+5601548 | None:intergenic |
| AACCCATATCAGAAGATTAG+AGG | 0.442026 | 5_4:-5600675 | Msa0832570:CDS |
| TTGGGAACTTTCCTTGGAAA+GGG | 0.444214 | 5_4:+5601579 | None:intergenic |
| AGACTATGAGATATTAAAAC+AGG | 0.445367 | 5_4:-5600885 | Msa0832570:CDS |
| CTCATGTCTCTCTTCCCATC+AGG | 0.446018 | 5_4:-5602572 | Msa0832570:CDS |
| CTCGAAAATCAGAAGAAGCT+TGG | 0.447142 | 5_4:-5600242 | Msa0832570:CDS |
| TAGACGCAGTTCACTTGCTT+CGG | 0.447539 | 5_4:+5600427 | None:intergenic |
| CTTGGGAACTTTCCTTGGAA+AGG | 0.451320 | 5_4:+5601578 | None:intergenic |
| GCGGAGATGAACACTCATAT+TGG | 0.455757 | 5_4:+5600804 | None:intergenic |
| ACGATGCCAAAGTGAGAAAC+AGG | 0.457175 | 5_4:-5601336 | Msa0832570:CDS |
| GACACTCTTGAGGTTTCTTA+CGG | 0.459347 | 5_4:+5598717 | None:intergenic |
| AAACCTCAAGAGTGTCCATA+AGG | 0.465783 | 5_4:-5598710 | Msa0832570:CDS |
| GGTCTTTCGCAATGCTTCCT+CGG | 0.468804 | 5_4:+5600562 | None:intergenic |
| CTTTATTTCACTCTTTAGCT+GGG | 0.470948 | 5_4:+5599818 | None:intergenic |
| CTCTTAAATGAACAAGTAGA+AGG | 0.471330 | 5_4:-5600140 | Msa0832570:CDS |
| CTTTACAATTTGTTTCCTAA+GGG | 0.471588 | 5_4:+5601468 | None:intergenic |
| ATGGGGAAATCGAAATGTAT+AGG | 0.471968 | 5_4:-5600952 | Msa0832570:CDS |
| AGAGACATGAGAGGGCTTTG+TGG | 0.474075 | 5_4:+5602584 | None:intergenic |
| TGGCATCGTCCATGCGTTTG+TGG | 0.475881 | 5_4:+5601350 | None:intergenic |
| CTAGCTTATGTACAAGCTTG+TGG | 0.476951 | 5_4:+5600858 | None:intergenic |
| ATTTGGAGATTCCGCGGCAC+GGG | 0.477344 | 5_4:+5601720 | None:intergenic |
| GCTTCAATTCAATGCTACTA+AGG | 0.477435 | 5_4:-5603423 | Msa0832570:intron |
| GAGTTTCATCTCTAACTCTT+GGG | 0.477504 | 5_4:+5601087 | None:intergenic |
| CGCTGCTTTGGCGAGGCACG+TGG | 0.482197 | 5_4:-5601515 | Msa0832570:CDS |
| GGTTCTTGCCGTGCAGGACC+TGG | 0.487908 | 5_4:-5601185 | Msa0832570:CDS |
| GGGCCATAACTGGAACAAAC+TGG | 0.489446 | 5_4:+5601740 | None:intergenic |
| AGACAGAATGTGACAATGTC+AGG | 0.491642 | 5_4:-5601378 | Msa0832570:CDS |
| TTATCAAAAGCTAGCGCGGT+CGG | 0.492008 | 5_4:-5602642 | Msa0832570:CDS |
| TCAAGTTCTGATGACAGCTC+TGG | 0.494881 | 5_4:-5601820 | Msa0832570:CDS |
| TGAATTGGTTCTTGCCGTGC+AGG | 0.496687 | 5_4:-5601191 | Msa0832570:CDS |
| CCTGAATCTCTTCTCAATGC+TGG | 0.497104 | 5_4:+5599776 | None:intergenic |
| GTCTAAACATTCCAATGGAC+AGG | 0.497144 | 5_4:-5601125 | Msa0832570:CDS |
| TTGTCTTTCACCTTCGACCT+CGG | 0.497897 | 5_4:+5598753 | None:intergenic |
| GGAAATATCATCTATGAAGA+AGG | 0.498047 | 5_4:-5599239 | Msa0832570:CDS |
| GAGTCTCTCCATCTCCAAAT+GGG | 0.499624 | 5_4:+5601549 | None:intergenic |
| TCCAGTTATGGCCCGTGCCG+CGG | 0.500299 | 5_4:-5601731 | Msa0832570:CDS |
| CACAATTGCGTCATTGAAGA+AGG | 0.500768 | 5_4:-5600015 | Msa0832570:CDS |
| TCAATGTCATTCATAGCAGC+AGG | 0.501038 | 5_4:+5600782 | None:intergenic |
| AGCCCTTATGGACACTCTTG+AGG | 0.501555 | 5_4:+5598707 | None:intergenic |
| AAGAGTGAAATAAAGAAGAA+AGG | 0.501656 | 5_4:-5599810 | Msa0832570:CDS |
| AAAGTCAAAGGAAACTGCCT+TGG | 0.503241 | 5_4:-5599459 | Msa0832570:CDS |
| AACAACTTCATCTATGAAGA+AGG | 0.504107 | 5_4:-5599429 | Msa0832570:CDS |
| TTCATCTATGAAGAAGGAAA+AGG | 0.506959 | 5_4:-5599423 | Msa0832570:CDS |
| TTGGTGTTGTCAATAGTTCC+TGG | 0.507047 | 5_4:-5602912 | Msa0832570:CDS |
| CTCAAATTTGCCGAGGTCGA+AGG | 0.512604 | 5_4:-5598763 | Msa0832570:CDS |
| ACATGGAACTACAGACCCTT+AGG | 0.513199 | 5_4:-5601483 | Msa0832570:CDS |
| TCAATAGTTCCTGGTGACAT+TGG | 0.514235 | 5_4:-5602903 | Msa0832570:CDS |
| ATCAAAAGCTAGCGCGGTCG+GGG | 0.515068 | 5_4:-5602640 | Msa0832570:CDS |
| CATTATCTTGAAAGATGAAA+GGG | 0.517094 | 5_4:-5601410 | Msa0832570:CDS |
| TCAGAGCAGAATTGTGGAGC+TGG | 0.519772 | 5_4:-5599206 | Msa0832570:CDS |
| TCAGAGCAGAATTGTGGAGC+TGG | 0.519772 | 5_4:-5599396 | Msa0832570:CDS |
| GAAGGAAAGAAACAAATCAA+TGG | 0.521587 | 5_4:-5598830 | Msa0832570:CDS |
| TTTATCGTGTTCCTGTCCAT+TGG | 0.522075 | 5_4:+5601114 | None:intergenic |
| ATCATCTATGAAGAAGGAAA+AGG | 0.522742 | 5_4:-5599233 | Msa0832570:CDS |
| CTGCAGTGTATAGCTGTAGC+AGG | 0.523315 | 5_4:-5598654 | Msa0832570:three_prime_UTR |
| AGTATGGGCGATTCAACAAA+CGG | 0.523348 | 5_4:-5601613 | Msa0832570:CDS |
| ATTGTAAAGGAAAGCAAAAG+AGG | 0.523810 | 5_4:-5601454 | Msa0832570:CDS |
| GCAGGACCTGGAAGAGATGT+TGG | 0.525811 | 5_4:-5601173 | Msa0832570:CDS |
| TTTACATCAGAGATCACAAT+GGG | 0.529077 | 5_4:-5601665 | Msa0832570:CDS |
| TTCTCAAAATGCCCTTTCCA+AGG | 0.530388 | 5_4:-5601590 | Msa0832570:CDS |
| CGTCATCTAGCTCAGAGCTC+GGG | 0.531611 | 5_4:-5601639 | Msa0832570:CDS |
| TAACATTTCAAATACCAAGA+AGG | 0.531925 | 5_4:+5598558 | None:intergenic |
| TACCTTTGATGAAAATGAGA+AGG | 0.534206 | 5_4:-5600468 | Msa0832570:CDS |
| ATAAACAACAGAACGTCTAG+TGG | 0.536249 | 5_4:-5601859 | Msa0832570:CDS |
| TGCTTCGGTCAATGCTCTCA+TGG | 0.536262 | 5_4:+5600442 | None:intergenic |
| GCAGGTGTACTTTGCAGCAG+TGG | 0.537617 | 5_4:-5598636 | Msa0832570:three_prime_UTR |
| AACAGGTCACAGTTGGAAAG+TGG | 0.538483 | 5_4:-5601319 | Msa0832570:CDS |
| ACAATCAGGGGTAGATGCAT+TGG | 0.538961 | 5_4:-5602931 | Msa0832570:CDS |
| TATTTCAGGTGTTACAATCA+GGG | 0.542788 | 5_4:-5602944 | Msa0832570:intron |
| CATTTGGAGATTCCGCGGCA+CGG | 0.543245 | 5_4:+5601719 | None:intergenic |
| AGAAATCTTAAGAACTGACT+TGG | 0.543909 | 5_4:-5600114 | Msa0832570:CDS |
| CGGTTCAAGATGGAAATTGT+CGG | 0.544548 | 5_4:-5602851 | Msa0832570:CDS |
| TCAGATACAGCAGATGTTGG+TGG | 0.544798 | 5_4:-5600288 | Msa0832570:CDS |
| TCTGAAACATTGTTACATCA+AGG | 0.545037 | 5_4:-5600065 | Msa0832570:CDS |
| TCGTCATCTAGCTCAGAGCT+CGG | 0.545721 | 5_4:-5601640 | Msa0832570:CDS |
| TTGTATCTATTTGATTGCAA+AGG | 0.545922 | 5_4:+5600318 | None:intergenic |
| TGAAGTTGTTGAACTTTCCA+AGG | 0.546447 | 5_4:+5599442 | None:intergenic |
| GGACGCAACCAACTTTCTGA+TGG | 0.547926 | 5_4:-5599744 | Msa0832570:CDS |
| TAGACTATTGAAGTCAGAGT+TGG | 0.550029 | 5_4:-5599925 | Msa0832570:CDS |
| GAGAAAGCTACGGTTCAAGA+TGG | 0.550233 | 5_4:-5602861 | Msa0832570:CDS |
| CAGCATTGAGAAGAGATTCA+GGG | 0.550761 | 5_4:-5599775 | Msa0832570:CDS |
| AACTGGAACAAACTGGTTTG+TGG | 0.550964 | 5_4:+5601747 | None:intergenic |
| TATTATCAGGATCCAAAGAC+CGG | 0.553668 | 5_4:-5602798 | Msa0832570:CDS |
| GTTGGTCTTCCAATGTCACC+AGG | 0.557975 | 5_4:+5602894 | None:intergenic |
| GGAACTTCAGAGCAGAATTG+TGG | 0.558888 | 5_4:-5599212 | Msa0832570:CDS |
| GGAACTTCAGAGCAGAATTG+TGG | 0.558888 | 5_4:-5599402 | Msa0832570:CDS |
| GGAACAAACTGGTTTGTGGT+GGG | 0.559149 | 5_4:+5601751 | None:intergenic |
| AACCTCAAGAGTGTCCATAA+GGG | 0.560828 | 5_4:-5598709 | Msa0832570:CDS |
| CACGCGGACAATAGTCTTGG+TGG | 0.562303 | 5_4:-5598877 | Msa0832570:CDS |
| GGCGAGGCACGTGGATGTGT+CGG | 0.566205 | 5_4:-5601506 | Msa0832570:CDS |
| GCACGTGGATGTGTCGGACA+TGG | 0.566394 | 5_4:-5601500 | Msa0832570:CDS |
| TCATTATCTTGAAAGATGAA+AGG | 0.568558 | 5_4:-5601411 | Msa0832570:CDS |
| ACTTATGAAGAAATCAATTG+AGG | 0.571259 | 5_4:-5600090 | Msa0832570:CDS |
| CCTTAGGAAACAAATTGTAA+AGG | 0.572841 | 5_4:-5601467 | Msa0832570:CDS |
| GAACACGCGGACAATAGTCT+TGG | 0.573106 | 5_4:-5598880 | Msa0832570:CDS |
| GGGAAATCGAAATGTATAGG+AGG | 0.573376 | 5_4:-5600949 | Msa0832570:CDS |
| CTGCTACAGCTATACACTGC+AGG | 0.574967 | 5_4:+5598655 | None:intergenic |
| ACGTAGCGTGTAAGAACAGA+AGG | 0.578756 | 5_4:+5603690 | None:intergenic |
| TGAAGCTGATATAGAAGCAA+TGG | 0.579079 | 5_4:-5600624 | Msa0832570:CDS |
| AGTGAGAAACAGGTCACAGT+TGG | 0.580096 | 5_4:-5601326 | Msa0832570:CDS |
| TGCGTCATTGAAGAAGGAAG+CGG | 0.583079 | 5_4:-5600009 | Msa0832570:CDS |
| AGAGGCATCCCATTTGGAGA+TGG | 0.583581 | 5_4:-5601557 | Msa0832570:CDS |
| CTTCCCATCAGGAATTCTCA+TGG | 0.584077 | 5_4:-5602561 | Msa0832570:CDS |
| AATTCAGATACAGCAGATGT+TGG | 0.585982 | 5_4:-5600291 | Msa0832570:CDS |
| AAAGGAAAGCAAAAGAGGGC+AGG | 0.588422 | 5_4:-5601449 | Msa0832570:CDS |
| TAAATCATGCATCGGTGTCG+AGG | 0.589755 | 5_4:+5601684 | None:intergenic |
| ATTTCAGGTGTTACAATCAG+GGG | 0.591987 | 5_4:-5602943 | Msa0832570:intron |
| AATATGTCTAAACATTCCAA+TGG | 0.592097 | 5_4:-5601130 | Msa0832570:CDS |
| AATTCGATGATAAGAGCTCA+AGG | 0.592445 | 5_4:-5602190 | Msa0832570:CDS |
| TCAGAGCTCGGGTTAAGTAT+GGG | 0.598271 | 5_4:-5601628 | Msa0832570:CDS |
| AGAACTCAAGGAGCAGTCAG+AGG | 0.599935 | 5_4:-5600735 | Msa0832570:CDS |
| TACAGCTGAAAGGCTTCAAG+AGG | 0.600122 | 5_4:-5600522 | Msa0832570:CDS |
| TTCAAGATGGAAATTGTCGG+TGG | 0.600830 | 5_4:-5602848 | Msa0832570:CDS |
| TCAGGGCCTGATAAAGTCAA+AGG | 0.602212 | 5_4:-5599471 | Msa0832570:intron |
| AGCATTGGATGATCTTGTCA+AGG | 0.603938 | 5_4:-5601029 | Msa0832570:CDS |
| TGTTTCGTTCTTCAAAATGG+AGG | 0.604012 | 5_4:-5603478 | Msa0832570:CDS |
| GAACAAACTGGTTTGTGGTG+GGG | 0.604811 | 5_4:+5601752 | None:intergenic |
| CTGAACTCGCTGCTTTGGCG+AGG | 0.604966 | 5_4:-5601522 | Msa0832570:CDS |
| TTTCTCAGTCCAATTTCGCA+GGG | 0.605119 | 5_4:+5601787 | None:intergenic |
| AAGTAAAATGAGAAATCTCA+AGG | 0.605138 | 5_4:-5599967 | Msa0832570:CDS |
| CTCTGATGTAAATCATGCAT+CGG | 0.607162 | 5_4:+5601676 | None:intergenic |
| AGCAGCATTTGGAGATTCCG+CGG | 0.610316 | 5_4:+5601714 | None:intergenic |
| TCGGTGGTTGATCAACTCGT+TGG | 0.613976 | 5_4:+5603647 | None:intergenic |
| TGGAACAAACTGGTTTGTGG+TGG | 0.614538 | 5_4:+5601750 | None:intergenic |
| AAGAGGGCAGGATCTCATGA+AGG | 0.615741 | 5_4:-5601437 | Msa0832570:CDS |
| CAGGTCTTTCCACAAACGCA+TGG | 0.619261 | 5_4:-5601359 | Msa0832570:CDS |
| TTGTAAAGGAAAGCAAAAGA+GGG | 0.620965 | 5_4:-5601453 | Msa0832570:CDS |
| GCAGGCTCCAATATATCAAG+AGG | 0.621129 | 5_4:+5598673 | None:intergenic |
| AAAATGCTAATACAGCTGAA+AGG | 0.622552 | 5_4:-5600532 | Msa0832570:CDS |
| GCAAAGAGCCATCCAAGCCG+AGG | 0.624482 | 5_4:-5600579 | Msa0832570:CDS |
| AAGAGATTCAGGGATAGTAA+CGG | 0.632337 | 5_4:-5599765 | Msa0832570:CDS |
| ATGGGAAGAGAGACATGAGA+GGG | 0.634288 | 5_4:+5602576 | None:intergenic |
| TCAAGATGGAAATTGTCGGT+GGG | 0.636130 | 5_4:-5602847 | Msa0832570:CDS |
| ATCACCATGAGAATTCCTGA+TGG | 0.636391 | 5_4:+5602557 | None:intergenic |
| TCACCATGAGAATTCCTGAT+GGG | 0.636505 | 5_4:+5602558 | None:intergenic |
| AAAGAGATTAGAGAAAGCTA+CGG | 0.643270 | 5_4:-5602871 | Msa0832570:CDS |
| AATGTATAGGAGGGACAAAG+AGG | 0.644821 | 5_4:-5600939 | Msa0832570:CDS |
| TGTGGAGCTGGAGAACAAAG+TGG | 0.648905 | 5_4:-5599194 | Msa0832570:CDS |
| TGTGGAGCTGGAGAACAAAG+TGG | 0.648905 | 5_4:-5599384 | Msa0832570:CDS |
| GGAAATCGAAATGTATAGGA+GGG | 0.649296 | 5_4:-5600948 | Msa0832570:CDS |
| TCAAGGAACCAATTCAGCAA+CGG | 0.650410 | 5_4:-5602173 | Msa0832570:CDS |
| ATTGTTACATCAAGGAACTG+TGG | 0.651765 | 5_4:-5600057 | Msa0832570:CDS |
| CCATATCAGAAGATTAGAGG+AGG | 0.654206 | 5_4:-5600672 | Msa0832570:CDS |
| CATCTCTTCCAGGTCCTGCA+CGG | 0.656396 | 5_4:+5601177 | None:intergenic |
| CGAAAATCAGAAGAAGCTTG+GGG | 0.658269 | 5_4:-5600240 | Msa0832570:CDS |
| TAAACAACAGAACGTCTAGT+GGG | 0.662018 | 5_4:-5601858 | Msa0832570:CDS |
| TTCCAAGGAAAGTTCCCAAG+AGG | 0.662303 | 5_4:-5601575 | Msa0832570:CDS |
| GATGGGAAGAGAGACATGAG+AGG | 0.665257 | 5_4:+5602575 | None:intergenic |
| AATGAGTCTCAAATTTGCCG+AGG | 0.681950 | 5_4:-5598770 | Msa0832570:CDS |
| AGTTAATAGGGATTTCTCTG+AGG | 0.682694 | 5_4:-5600213 | Msa0832570:CDS |
| TCAGAACGTTACTTTACACG+AGG | 0.685129 | 5_4:-5599161 | Msa0832570:intron |
| TCAGAACGTTACTTTACACG+AGG | 0.685129 | 5_4:-5599351 | Msa0832570:intron |
| GGGGTTATCAAAAGCTAGCG+CGG | 0.685962 | 5_4:-5602646 | Msa0832570:CDS |
| ATGTCATTCATAGCAGCAGG+CGG | 0.688666 | 5_4:+5600785 | None:intergenic |
| GTCAACTAAAGCCAATTACG+AGG | 0.689810 | 5_4:-5600354 | Msa0832570:CDS |
| ATTTACATCAGAGATCACAA+TGG | 0.703701 | 5_4:-5601666 | Msa0832570:CDS |
| AGAACTTGACAATGTAACGT+CGG | 0.708038 | 5_4:+5601834 | None:intergenic |
| GGAGCTGGAGAACAAAGTGG+AGG | 0.710392 | 5_4:-5599191 | Msa0832570:CDS |
| GGAGCTGGAGAACAAAGTGG+AGG | 0.710392 | 5_4:-5599381 | Msa0832570:CDS |
| AAGAAATAGATTGGAACACG+CGG | 0.713897 | 5_4:-5598893 | Msa0832570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAATTACTAAACT+CGG | + | chr5_4:5598593-5598612 | None:intergenic | 10.0% |
| !! | TTATATTATTATTGAAATCT+AGG | + | chr5_4:5599078-5599097 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTTTATTCTTAA+TGG | - | chr5_4:5599186-5599205 | Msa0832570:CDS | 10.0% |
| !!! | TCTTTTATATTAACATAAAA+AGG | + | chr5_4:5602718-5602737 | None:intergenic | 10.0% |
| !! | TAATAAACTAATGTTTATAA+TGG | - | chr5_4:5603620-5603639 | Msa0832570:five_prime_UTR | 10.0% |
| !!! | TTTTTATTCTTAATGGTATT+AGG | - | chr5_4:5599193-5599212 | Msa0832570:CDS | 15.0% |
| !!! | TGTCATTGTTATAAAATTTT+TGG | - | chr5_4:5599538-5599557 | Msa0832570:intron | 15.0% |
| !!! | GTCATTGTTATAAAATTTTT+GGG | - | chr5_4:5599539-5599558 | Msa0832570:intron | 15.0% |
| !!! | TGATTTTTTGATTAATAAAC+AGG | - | chr5_4:5599814-5599833 | Msa0832570:CDS | 15.0% |
| !! | AAAAAAATGATCAAATTCAA+AGG | - | chr5_4:5599858-5599877 | Msa0832570:CDS | 15.0% |
| !! | AAAAAAATTATAGACTTGTA+TGG | - | chr5_4:5601247-5601266 | Msa0832570:CDS | 15.0% |
| !! | AAAAAATTATAGACTTGTAT+GGG | - | chr5_4:5601248-5601267 | Msa0832570:CDS | 15.0% |
| !! | ATCTTATGTTTCAGATATTA+AGG | + | chr5_4:5598480-5598499 | None:intergenic | 20.0% |
| !!! | TACATTGAATTTTTGATAAC+TGG | - | chr5_4:5598614-5598633 | Msa0832570:three_prime_UTR | 20.0% |
| !! | GAATGAATAATCTAATGTAT+TGG | - | chr5_4:5598936-5598955 | Msa0832570:CDS | 20.0% |
| !! | CAAGAAAATTGAAATATGAT+AGG | + | chr5_4:5599125-5599144 | None:intergenic | 20.0% |
| !!! | CTATCATATTTCAATTTTCT+TGG | - | chr5_4:5599123-5599142 | Msa0832570:intron | 20.0% |
| !!! | AATTTTCTTGGAAATGAAAA+TGG | - | chr5_4:5599135-5599154 | Msa0832570:intron | 20.0% |
| !!! | CATTATTATTTTTCCATTTC+TGG | - | chr5_4:5599899-5599918 | Msa0832570:CDS | 20.0% |
| !! | TTTGTTTGTATATATTCAAC+TGG | - | chr5_4:5600192-5600211 | Msa0832570:CDS | 20.0% |
| !! | AAAAATTATAGACTTGTATG+GGG | - | chr5_4:5601249-5601268 | Msa0832570:CDS | 20.0% |
| !!! | TTTTAATATCTCATAGTCTA+GGG | + | chr5_4:5601332-5601351 | None:intergenic | 20.0% |
| !!! | AAGCAATTTTTTTGTTGATT+GGG | + | chr5_4:5602512-5602531 | None:intergenic | 20.0% |
| !! | TATAAAAGATTGTTTATGTC+AGG | - | chr5_4:5602729-5602748 | Msa0832570:intron | 20.0% |
| !! | ATAAAAGATTGTTTATGTCA+GGG | - | chr5_4:5602730-5602749 | Msa0832570:intron | 20.0% |
| ! | AAAAAAATTACTAAACTCGG+TGG | + | chr5_4:5598590-5598609 | None:intergenic | 25.0% |
| !!! | TGAATTTTTGATAACTGGAA+CGG | - | chr5_4:5598619-5598638 | Msa0832570:three_prime_UTR | 25.0% |
| ! | TATTCTTAATGGTATTAGGT+TGG | - | chr5_4:5599197-5599216 | Msa0832570:CDS | 25.0% |
| !!! | TATTTTGTCGTTGATTTTTC+CGG | + | chr5_4:5599442-5599461 | None:intergenic | 25.0% |
| !!! | ATATCATTTTTTGCTCTCAA+CGG | - | chr5_4:5599461-5599480 | Msa0832570:CDS | 25.0% |
| !!! | AAATTTTTGGGTTTATATGC+AGG | - | chr5_4:5599551-5599570 | Msa0832570:intron | 25.0% |
| !!! | AATTTTTGGGTTTATATGCA+GGG | - | chr5_4:5599552-5599571 | Msa0832570:intron | 25.0% |
| !!! | CTTCACTCAAAATTTTGATT+AGG | + | chr5_4:5599761-5599780 | None:intergenic | 25.0% |
| !!! | AAATTCAAAGGTACTACAAA+GGG | - | chr5_4:5599870-5599889 | Msa0832570:CDS | 25.0% |
| ! | AAAATTCTTGTGACTTCTTA+CGG | - | chr5_4:5600130-5600149 | Msa0832570:CDS | 25.0% |
| !!! | CTTCACATGTTTTTTACTTT+CGG | + | chr5_4:5600283-5600302 | None:intergenic | 25.0% |
| !! | CTTTACAATTTGTTTCCTAA+GGG | + | chr5_4:5600753-5600772 | None:intergenic | 25.0% |
| ! | TCATTATCTTGAAAGATGAA+AGG | - | chr5_4:5600807-5600826 | Msa0832570:CDS | 25.0% |
| ! | CATTATCTTGAAAGATGAAA+GGG | - | chr5_4:5600808-5600827 | Msa0832570:CDS | 25.0% |
| !!! | GCATCTTTTTTAACTGTAAT+CGG | + | chr5_4:5600994-5601013 | None:intergenic | 25.0% |
| ! | AATATGTCTAAACATTCCAA+TGG | - | chr5_4:5601088-5601107 | Msa0832570:CDS | 25.0% |
| !!! | GTTTTAATATCTCATAGTCT+AGG | + | chr5_4:5601333-5601352 | None:intergenic | 25.0% |
| ! | AGACTATGAGATATTAAAAC+AGG | - | chr5_4:5601333-5601352 | Msa0832570:CDS | 25.0% |
| ! | TTGTATCTATTTGATTGCAA+AGG | + | chr5_4:5601903-5601922 | None:intergenic | 25.0% |
| ! | ACTTATGAAGAAATCAATTG+AGG | - | chr5_4:5602128-5602147 | Msa0832570:intron | 25.0% |
| ! | AAGTAAAATGAGAAATCTCA+AGG | - | chr5_4:5602251-5602270 | Msa0832570:intron | 25.0% |
| !!! | TTTGAAAAAGTCACTTTTTG+AGG | - | chr5_4:5602341-5602360 | Msa0832570:intron | 25.0% |
| ! | AAGAGTGAAATAAAGAAGAA+AGG | - | chr5_4:5602408-5602427 | Msa0832570:intron | 25.0% |
| !!! | AATTTTTTTGTTGATTGGGA+TGG | + | chr5_4:5602508-5602527 | None:intergenic | 25.0% |
| !!! | GAAGCAATTTTTTTGTTGAT+TGG | + | chr5_4:5602513-5602532 | None:intergenic | 25.0% |
| ! | AGAGAAAATAAAAATGCTTG+AGG | - | chr5_4:5602569-5602588 | Msa0832570:CDS | 25.0% |
| ! | ACATAAAAAGGAGAAAATGA+AGG | + | chr5_4:5602706-5602725 | None:intergenic | 25.0% |
| ! | AGAAGAAGTAAGAAATAGAT+TGG | - | chr5_4:5603316-5603335 | Msa0832570:intron | 25.0% |
| ! | AATATGTTATTCTTCCTTCT+TGG | - | chr5_4:5603646-5603665 | Msa0832570:five_prime_UTR | 25.0% |
| ! | TAACATTTCAAATACCAAGA+AGG | + | chr5_4:5603663-5603682 | None:intergenic | 25.0% |
| ATTGAAATAACGTTCGTTGT+TGG | - | chr5_4:5598427-5598446 | Msa0832570:three_prime_UTR | 30.0% | |
| !!! | GTTGTTTTTGGTGTTTTAGT+TGG | - | chr5_4:5598641-5598660 | Msa0832570:three_prime_UTR | 30.0% |
| AGATGTTTCGTTCTTCAAAA+TGG | - | chr5_4:5598737-5598756 | Msa0832570:CDS | 30.0% | |
| !! | TCTAATGTATTGGTTCTGTT+AGG | - | chr5_4:5598946-5598965 | Msa0832570:intron | 30.0% |
| ATGAGATGAGAAATTGTGTT+TGG | - | chr5_4:5599243-5599262 | Msa0832570:CDS | 30.0% | |
| !! | GTTTGGTGATGTAATATTTC+AGG | - | chr5_4:5599260-5599279 | Msa0832570:intron | 30.0% |
| ! | ATATTTCAGGTGTTACAATC+AGG | - | chr5_4:5599273-5599292 | Msa0832570:intron | 30.0% |
| ! | TATTTCAGGTGTTACAATCA+GGG | - | chr5_4:5599274-5599293 | Msa0832570:intron | 30.0% |
| AAAGAGATTAGAGAAAGCTA+CGG | - | chr5_4:5599347-5599366 | Msa0832570:intron | 30.0% | |
| !!! | ATTTTTGGGTTTATATGCAG+GGG | - | chr5_4:5599553-5599572 | Msa0832570:intron | 30.0% |
| ATTTCAAGCAACTTTACATC+TGG | + | chr5_4:5599728-5599747 | None:intergenic | 30.0% | |
| !!! | CATTTTTTTCTTGCATTCTC+TGG | + | chr5_4:5599847-5599866 | None:intergenic | 30.0% |
| !! | CAAATTCAAAGGTACTACAA+AGG | - | chr5_4:5599869-5599888 | Msa0832570:CDS | 30.0% |
| CAATCTTGTATAACCAGAAA+TGG | + | chr5_4:5599915-5599934 | None:intergenic | 30.0% | |
| !! | CATTTCTGGTTATACAAGAT+TGG | - | chr5_4:5599913-5599932 | Msa0832570:CDS | 30.0% |
| !!! | CTTGAGAGTTTTTTATGATG+TGG | - | chr5_4:5599946-5599965 | Msa0832570:CDS | 30.0% |
| TTTCAATAACATTTGCAGAG+AGG | - | chr5_4:5599978-5599997 | Msa0832570:CDS | 30.0% | |
| ATTTACATCAGAGATCACAA+TGG | - | chr5_4:5600552-5600571 | Msa0832570:CDS | 30.0% | |
| TTTACATCAGAGATCACAAT+GGG | - | chr5_4:5600553-5600572 | Msa0832570:CDS | 30.0% | |
| ! | CCTTTACAATTTGTTTCCTA+AGG | + | chr5_4:5600754-5600773 | None:intergenic | 30.0% |
| CCTTAGGAAACAAATTGTAA+AGG | - | chr5_4:5600751-5600770 | Msa0832570:CDS | 30.0% | |
| ATTGTAAAGGAAAGCAAAAG+AGG | - | chr5_4:5600764-5600783 | Msa0832570:CDS | 30.0% | |
| TTGTAAAGGAAAGCAAAAGA+GGG | - | chr5_4:5600765-5600784 | Msa0832570:CDS | 30.0% | |
| ! | TGATGAAGATCAAAAAGCAT+TGG | - | chr5_4:5601174-5601193 | Msa0832570:CDS | 30.0% |
| AAATTCTCTAGCTACCATTA+AGG | - | chr5_4:5601513-5601532 | Msa0832570:CDS | 30.0% | |
| !! | TGTATTAGCATTTTTCAGTC+TGG | + | chr5_4:5601680-5601699 | None:intergenic | 30.0% |
| AAAATGCTAATACAGCTGAA+AGG | - | chr5_4:5601686-5601705 | Msa0832570:CDS | 30.0% | |
| TACCTTTGATGAAAATGAGA+AGG | - | chr5_4:5601750-5601769 | Msa0832570:CDS | 30.0% | |
| CTCTTAAATGAACAAGTAGA+AGG | - | chr5_4:5602078-5602097 | Msa0832570:intron | 30.0% | |
| AGAAATCTTAAGAACTGACT+TGG | - | chr5_4:5602104-5602123 | Msa0832570:intron | 30.0% | |
| ! | TCTGAAACATTGTTACATCA+AGG | - | chr5_4:5602153-5602172 | Msa0832570:CDS | 30.0% |
| ! | CTTTATTTCACTCTTTAGCT+GGG | + | chr5_4:5602403-5602422 | None:intergenic | 30.0% |
| ! | TCTTTATTTCACTCTTTAGC+TGG | + | chr5_4:5602404-5602423 | None:intergenic | 30.0% |
| ! | TTTTAGATCCATCAGAAAGT+TGG | + | chr5_4:5602485-5602504 | None:intergenic | 30.0% |
| TCCTCATCATTCAAAAGAAA+TGG | - | chr5_4:5602536-5602555 | Msa0832570:intron | 30.0% | |
| CATCAATGATATGAAGACAT+AGG | - | chr5_4:5602604-5602623 | Msa0832570:CDS | 30.0% | |
| AACAACTTCATCTATGAAGA+AGG | - | chr5_4:5602789-5602808 | Msa0832570:CDS | 30.0% | |
| TTCATCTATGAAGAAGGAAA+AGG | - | chr5_4:5602795-5602814 | Msa0832570:CDS | 30.0% | |
| CAAGACTAAGTTTGTAATTC+AGG | + | chr5_4:5602956-5602975 | None:intergenic | 30.0% | |
| !! | ATTACAAACTTAGTCTTGCT+TGG | - | chr5_4:5602958-5602977 | Msa0832570:intron | 30.0% |
| GGAAATATCATCTATGAAGA+AGG | - | chr5_4:5602979-5602998 | Msa0832570:intron | 30.0% | |
| ATCATCTATGAAGAAGGAAA+AGG | - | chr5_4:5602985-5603004 | Msa0832570:intron | 30.0% | |
| CAAGACTAAGTTTGTAATTC+AGG | + | chr5_4:5602956-5602975 | None:intergenic | 30.0% | |
| !! | ATTACAAACTTAGTCTTGCT+TGG | - | chr5_4:5602958-5602977 | Msa0832570:intron | 30.0% |
| AAACATTCGTTGTTGAAATG+TGG | - | chr5_4:5603187-5603206 | Msa0832570:intron | 30.0% | |
| GAAGGAAAGAAACAAATCAA+TGG | - | chr5_4:5603388-5603407 | Msa0832570:intron | 30.0% | |
| ! | GTTTTCTCCTCTTGATATAT+TGG | - | chr5_4:5603538-5603557 | Msa0832570:five_prime_UTR | 30.0% |
| !! | ATAACTGGAACGGTTGTTTT+TGG | - | chr5_4:5598629-5598648 | Msa0832570:three_prime_UTR | 35.0% |
| !!! | GTTTTTGGTGTTTTAGTTGG+TGG | - | chr5_4:5598644-5598663 | Msa0832570:three_prime_UTR | 35.0% |
| TGTTTCGTTCTTCAAAATGG+AGG | - | chr5_4:5598740-5598759 | Msa0832570:CDS | 35.0% | |
| GCTTCAATTCAATGCTACTA+AGG | - | chr5_4:5598795-5598814 | Msa0832570:CDS | 35.0% | |
| CAATTCAATGCTACTAAGGT+AGG | - | chr5_4:5598799-5598818 | Msa0832570:CDS | 35.0% | |
| ! | ATTTCAGGTGTTACAATCAG+GGG | - | chr5_4:5599275-5599294 | Msa0832570:intron | 35.0% |
| GCTTTCTCTAATCTCTTTGT+TGG | + | chr5_4:5599345-5599364 | None:intergenic | 35.0% | |
| CGAAACAGTCAAGTATTATC+AGG | - | chr5_4:5599407-5599426 | Msa0832570:CDS | 35.0% | |
| TATTATCAGGATCCAAAGAC+CGG | - | chr5_4:5599420-5599439 | Msa0832570:CDS | 35.0% | |
| !! | AAAGGTACTACAAAGGGAAT+TGG | - | chr5_4:5599876-5599895 | Msa0832570:CDS | 35.0% |
| AATTCGATGATAAGAGCTCA+AGG | - | chr5_4:5600028-5600047 | Msa0832570:CDS | 35.0% | |
| AGTAAGCATTTCACTCATTC+AGG | - | chr5_4:5600104-5600123 | Msa0832570:CDS | 35.0% | |
| ! | CGTTCTGTTGTTTATTGCTT+TGG | + | chr5_4:5600354-5600373 | None:intergenic | 35.0% |
| ATAAACAACAGAACGTCTAG+TGG | - | chr5_4:5600359-5600378 | Msa0832570:CDS | 35.0% | |
| TAAACAACAGAACGTCTAGT+GGG | - | chr5_4:5600360-5600379 | Msa0832570:CDS | 35.0% | |
| AGAACTTGACAATGTAACGT+CGG | + | chr5_4:5600387-5600406 | None:intergenic | 35.0% | |
| ! | AAACCAGTTTGTTCCAGTTA+TGG | - | chr5_4:5600475-5600494 | Msa0832570:CDS | 35.0% |
| CTCTGATGTAAATCATGCAT+CGG | + | chr5_4:5600545-5600564 | None:intergenic | 35.0% | |
| TTGTCTGATTTCTTCGACAA+AGG | + | chr5_4:5600936-5600955 | None:intergenic | 35.0% | |
| GCAAGAATCAAATGCTGAAT+TGG | - | chr5_4:5601012-5601031 | Msa0832570:CDS | 35.0% | |
| GAGTTTCATCTCTAACTCTT+GGG | + | chr5_4:5601134-5601153 | None:intergenic | 35.0% | |
| AGAGTTTCATCTCTAACTCT+TGG | + | chr5_4:5601135-5601154 | None:intergenic | 35.0% | |
| ATGGGGAAATCGAAATGTAT+AGG | - | chr5_4:5601266-5601285 | Msa0832570:CDS | 35.0% | |
| GGAAATCGAAATGTATAGGA+GGG | - | chr5_4:5601270-5601289 | Msa0832570:CDS | 35.0% | |
| TGTTTAACTGTTCCTGCAAT+TGG | + | chr5_4:5601393-5601412 | None:intergenic | 35.0% | |
| TGAAACTCACATTGAGAATC+TGG | - | chr5_4:5601456-5601475 | Msa0832570:CDS | 35.0% | |
| GAATCTGGAAAAAGAACTCA+AGG | - | chr5_4:5601471-5601490 | Msa0832570:CDS | 35.0% | |
| !! | ATGGGTTTCTAGTACCTTAA+TGG | + | chr5_4:5601530-5601549 | None:intergenic | 35.0% |
| AACCCATATCAGAAGATTAG+AGG | - | chr5_4:5601543-5601562 | Msa0832570:CDS | 35.0% | |
| CTCCTCTAATCTTCTGATAT+GGG | + | chr5_4:5601548-5601567 | None:intergenic | 35.0% | |
| GAGATGGAAAAACAAGTACA+GGG | - | chr5_4:5601568-5601587 | Msa0832570:CDS | 35.0% | |
| TGAAGCTGATATAGAAGCAA+TGG | - | chr5_4:5601594-5601613 | Msa0832570:CDS | 35.0% | |
| ! | AGCCTTCTCATTTTCATCAA+AGG | + | chr5_4:5601755-5601774 | None:intergenic | 35.0% |
| CTACAGAAAAATCTAGTGGA+AGG | - | chr5_4:5601811-5601830 | Msa0832570:CDS | 35.0% | |
| ! | GTTCAGTTTTACCTCGTAAT+TGG | + | chr5_4:5601878-5601897 | None:intergenic | 35.0% |
| AATTCAGATACAGCAGATGT+TGG | - | chr5_4:5601927-5601946 | Msa0832570:intron | 35.0% | |
| TCGAAAATCAGAAGAAGCTT+GGG | - | chr5_4:5601977-5601996 | Msa0832570:intron | 35.0% | |
| AGTTAATAGGGATTTCTCTG+AGG | - | chr5_4:5602005-5602024 | Msa0832570:intron | 35.0% | |
| ATTGTTACATCAAGGAACTG+TGG | - | chr5_4:5602161-5602180 | Msa0832570:CDS | 35.0% | |
| CAAGGAAGAAAAAGAAGAAG+AGG | - | chr5_4:5602269-5602288 | Msa0832570:intron | 35.0% | |
| TAGACTATTGAAGTCAGAGT+TGG | - | chr5_4:5602293-5602312 | Msa0832570:intron | 35.0% | |
| !!! | AAAGTCACTTTTTGAGGATG+AGG | - | chr5_4:5602347-5602366 | Msa0832570:intron | 35.0% |
| AAGAGATTCAGGGATAGTAA+CGG | - | chr5_4:5602453-5602472 | Msa0832570:intron | 35.0% | |
| ! | TTCTTTTGAATGATGAGGAC+TGG | + | chr5_4:5602535-5602554 | None:intergenic | 35.0% |
| ! | GCCATTTCTTTTGAATGATG+AGG | + | chr5_4:5602540-5602559 | None:intergenic | 35.0% |
| TACAAGAGAAAACAGCATTC+AGG | + | chr5_4:5602658-5602677 | None:intergenic | 35.0% | |
| ! | CAGTTTCCTTTGACTTTATC+AGG | + | chr5_4:5602756-5602775 | None:intergenic | 35.0% |
| TGAAGTTGTTGAACTTTCCA+AGG | + | chr5_4:5602779-5602798 | None:intergenic | 35.0% | |
| ! | AGTTTGTAATTCAGGTTTCG+TGG | + | chr5_4:5602948-5602967 | None:intergenic | 35.0% |
| ! | AGTTTGTAATTCAGGTTTCG+TGG | + | chr5_4:5602948-5602967 | None:intergenic | 35.0% |
| CATTAACATGCCCTTCAAAT+TGG | - | chr5_4:5603253-5603272 | Msa0832570:intron | 35.0% | |
| TCCTGAACAACCAATTTGAA+GGG | + | chr5_4:5603266-5603285 | None:intergenic | 35.0% | |
| ATCCTGAACAACCAATTTGA+AGG | + | chr5_4:5603267-5603286 | None:intergenic | 35.0% | |
| AAGAAATAGATTGGAACACG+CGG | - | chr5_4:5603325-5603344 | Msa0832570:intron | 35.0% | |
| TTCCTTCAATGACGACAATT+CGG | + | chr5_4:5603375-5603394 | None:intergenic | 35.0% | |
| ACGCAAAAGTGATTGTTTAG+AGG | - | chr5_4:5603709-5603728 | Msa0832570:five_prime_UTR | 35.0% | |
| GTGTAAGAACAGAAGGAGTT+AGG | + | chr5_4:5598524-5598543 | None:intergenic | 40.0% | |
| !! | TAGTTGGTGGAGTAGTTGTT+TGG | - | chr5_4:5598657-5598676 | Msa0832570:three_prime_UTR | 40.0% |
| !! | AGTTGGTGGAGTAGTTGTTT+GGG | - | chr5_4:5598658-5598677 | Msa0832570:three_prime_UTR | 40.0% |
| AATGGAGGAGTGAGAAGAAT+AGG | - | chr5_4:5598755-5598774 | Msa0832570:CDS | 40.0% | |
| !! | ATTGGTTCTGTTAGGTTCTG+AGG | - | chr5_4:5598954-5598973 | Msa0832570:intron | 40.0% |
| !! | TTGGTTCTGTTAGGTTCTGA+GGG | - | chr5_4:5598955-5598974 | Msa0832570:intron | 40.0% |
| !! | TTGGTGTTGTCAATAGTTCC+TGG | - | chr5_4:5599306-5599325 | Msa0832570:intron | 40.0% |
| TCAATAGTTCCTGGTGACAT+TGG | - | chr5_4:5599315-5599334 | Msa0832570:intron | 40.0% | |
| CGGTTCAAGATGGAAATTGT+CGG | - | chr5_4:5599367-5599386 | Msa0832570:CDS | 40.0% | |
| TTCAAGATGGAAATTGTCGG+TGG | - | chr5_4:5599370-5599389 | Msa0832570:CDS | 40.0% | |
| TCAAGATGGAAATTGTCGGT+GGG | - | chr5_4:5599371-5599390 | Msa0832570:CDS | 40.0% | |
| AAATTGTCGGTGGGAGAATT+CGG | - | chr5_4:5599380-5599399 | Msa0832570:CDS | 40.0% | |
| !!! | TCGTTGATTTTTCCGGTCTT+TGG | + | chr5_4:5599435-5599454 | None:intergenic | 40.0% |
| TCACCATGAGAATTCCTGAT+GGG | + | chr5_4:5599663-5599682 | None:intergenic | 40.0% | |
| ATCACCATGAGAATTCCTGA+TGG | + | chr5_4:5599664-5599683 | None:intergenic | 40.0% | |
| TCAAGGAACCAATTCAGCAA+CGG | - | chr5_4:5600045-5600064 | Msa0832570:CDS | 40.0% | |
| AACAGATTGCGTACTGAGTA+AGG | + | chr5_4:5600223-5600242 | None:intergenic | 40.0% | |
| ! | TTCCTGTTTCTCTGCATAAC+AGG | - | chr5_4:5600319-5600338 | Msa0832570:CDS | 40.0% |
| ATCCTGTTATGCAGAGAAAC+AGG | + | chr5_4:5600324-5600343 | None:intergenic | 40.0% | |
| TTTCTCAGTCCAATTTCGCA+GGG | + | chr5_4:5600434-5600453 | None:intergenic | 40.0% | |
| ! | TTTTCTCAGTCCAATTTCGC+AGG | + | chr5_4:5600435-5600454 | None:intergenic | 40.0% |
| !! | AACTGGAACAAACTGGTTTG+TGG | + | chr5_4:5600474-5600493 | None:intergenic | 40.0% |
| AGTATGGGCGATTCAACAAA+CGG | - | chr5_4:5600605-5600624 | Msa0832570:CDS | 40.0% | |
| TTCTCAAAATGCCCTTTCCA+AGG | - | chr5_4:5600628-5600647 | Msa0832570:CDS | 40.0% | |
| TTGGGAACTTTCCTTGGAAA+GGG | + | chr5_4:5600642-5600661 | None:intergenic | 40.0% | |
| AGACAGAATGTGACAATGTC+AGG | - | chr5_4:5600840-5600859 | Msa0832570:CDS | 40.0% | |
| GTCTAAACATTCCAATGGAC+AGG | - | chr5_4:5601093-5601112 | Msa0832570:CDS | 40.0% | |
| TTTATCGTGTTCCTGTCCAT+TGG | + | chr5_4:5601107-5601126 | None:intergenic | 40.0% | |
| ! | AGCATTGGATGATCTTGTCA+AGG | - | chr5_4:5601189-5601208 | Msa0832570:CDS | 40.0% |
| CTCAAACAAGTGTGTCTCTT+TGG | + | chr5_4:5601227-5601246 | None:intergenic | 40.0% | |
| GGGAAATCGAAATGTATAGG+AGG | - | chr5_4:5601269-5601288 | Msa0832570:CDS | 40.0% | |
| AATGTATAGGAGGGACAAAG+AGG | - | chr5_4:5601279-5601298 | Msa0832570:CDS | 40.0% | |
| CTAGCTTATGTACAAGCTTG+TGG | + | chr5_4:5601363-5601382 | None:intergenic | 40.0% | |
| TCAATGTCATTCATAGCAGC+AGG | + | chr5_4:5601439-5601458 | None:intergenic | 40.0% | |
| CCTCCTCTAATCTTCTGATA+TGG | + | chr5_4:5601549-5601568 | None:intergenic | 40.0% | |
| CCATATCAGAAGATTAGAGG+AGG | - | chr5_4:5601546-5601565 | Msa0832570:CDS | 40.0% | |
| GGAGATGGAAAAACAAGTAC+AGG | - | chr5_4:5601567-5601586 | Msa0832570:CDS | 40.0% | |
| TCATTTGCATTGAGAGTCTC+TGG | + | chr5_4:5601726-5601745 | None:intergenic | 40.0% | |
| GCGTCTACAGAAAAATCTAG+TGG | - | chr5_4:5601807-5601826 | Msa0832570:CDS | 40.0% | |
| TAGTTGACTGAAGCTCTTCT+TGG | + | chr5_4:5601852-5601871 | None:intergenic | 40.0% | |
| GTCAACTAAAGCCAATTACG+AGG | - | chr5_4:5601864-5601883 | Msa0832570:CDS | 40.0% | |
| !!! | CTTCTGATTTTCGAGTTGCA+TGG | + | chr5_4:5601971-5601990 | None:intergenic | 40.0% |
| CTCGAAAATCAGAAGAAGCT+TGG | - | chr5_4:5601976-5601995 | Msa0832570:intron | 40.0% | |
| CGAAAATCAGAAGAAGCTTG+GGG | - | chr5_4:5601978-5601997 | Msa0832570:intron | 40.0% | |
| AGCTTGGGGAACAAGTTAAT+AGG | - | chr5_4:5601992-5602011 | Msa0832570:intron | 40.0% | |
| GCTTGGGGAACAAGTTAATA+GGG | - | chr5_4:5601993-5602012 | Msa0832570:intron | 40.0% | |
| CACAATTGCGTCATTGAAGA+AGG | - | chr5_4:5602203-5602222 | Msa0832570:CDS | 40.0% | |
| ! | CAGCATTGAGAAGAGATTCA+GGG | - | chr5_4:5602443-5602462 | Msa0832570:intron | 40.0% |
| AAAGTCAAAGGAAACTGCCT+TGG | - | chr5_4:5602759-5602778 | Msa0832570:CDS | 40.0% | |
| ! | TCAGAACGTTACTTTACACG+AGG | - | chr5_4:5602867-5602886 | Msa0832570:CDS | 40.0% |
| ! | TCAGAACGTTACTTTACACG+AGG | - | chr5_4:5602867-5602886 | Msa0832570:CDS | 40.0% |
| AATGAGTCTCAAATTTGCCG+AGG | - | chr5_4:5603448-5603467 | Msa0832570:CDS | 40.0% | |
| GACACTCTTGAGGTTTCTTA+CGG | + | chr5_4:5603504-5603523 | None:intergenic | 40.0% | |
| !! | AAACCTCAAGAGTGTCCATA+AGG | - | chr5_4:5603508-5603527 | Msa0832570:five_prime_UTR | 40.0% |
| !! | AACCTCAAGAGTGTCCATAA+GGG | - | chr5_4:5603509-5603528 | Msa0832570:five_prime_UTR | 40.0% |
| ACGTAGCGTGTAAGAACAGA+AGG | + | chr5_4:5598531-5598550 | None:intergenic | 45.0% | |
| ACAATCAGGGGTAGATGCAT+TGG | - | chr5_4:5599287-5599306 | Msa0832570:intron | 45.0% | |
| GAGAAAGCTACGGTTCAAGA+TGG | - | chr5_4:5599357-5599376 | Msa0832570:CDS | 45.0% | |
| TTATCAAAAGCTAGCGCGGT+CGG | - | chr5_4:5599576-5599595 | Msa0832570:intron | 45.0% | |
| ATGGGAAGAGAGACATGAGA+GGG | + | chr5_4:5599645-5599664 | None:intergenic | 45.0% | |
| CTTCCCATCAGGAATTCTCA+TGG | - | chr5_4:5599657-5599676 | Msa0832570:CDS | 45.0% | |
| ! | TCAAGTTCTGATGACAGCTC+TGG | - | chr5_4:5600398-5600417 | Msa0832570:CDS | 45.0% |
| GTTGATACTCCCTGCGAAAT+TGG | - | chr5_4:5600422-5600441 | Msa0832570:CDS | 45.0% | |
| !! | GAACAAACTGGTTTGTGGTG+GGG | + | chr5_4:5600469-5600488 | None:intergenic | 45.0% |
| !! | GGAACAAACTGGTTTGTGGT+GGG | + | chr5_4:5600470-5600489 | None:intergenic | 45.0% |
| !! | TGGAACAAACTGGTTTGTGG+TGG | + | chr5_4:5600471-5600490 | None:intergenic | 45.0% |
| ! | GAGGCATTAACAGCAGCATT+TGG | + | chr5_4:5600518-5600537 | None:intergenic | 45.0% |
| !! | TAAATCATGCATCGGTGTCG+AGG | + | chr5_4:5600537-5600556 | None:intergenic | 45.0% |
| TCAGAGCTCGGGTTAAGTAT+GGG | - | chr5_4:5600590-5600609 | Msa0832570:CDS | 45.0% | |
| CTTGGGAACTTTCCTTGGAA+AGG | + | chr5_4:5600643-5600662 | None:intergenic | 45.0% | |
| TTCCAAGGAAAGTTCCCAAG+AGG | - | chr5_4:5600643-5600662 | Msa0832570:CDS | 45.0% | |
| GAGTCTCTCCATCTCCAAAT+GGG | + | chr5_4:5600672-5600691 | None:intergenic | 45.0% | |
| TGAGTCTCTCCATCTCCAAA+TGG | + | chr5_4:5600673-5600692 | None:intergenic | 45.0% | |
| CAAATCTGAACTCGCTGCTT+TGG | - | chr5_4:5600691-5600710 | Msa0832570:CDS | 45.0% | |
| ACATGGAACTACAGACCCTT+AGG | - | chr5_4:5600735-5600754 | Msa0832570:CDS | 45.0% | |
| AAAGGAAAGCAAAAGAGGGC+AGG | - | chr5_4:5600769-5600788 | Msa0832570:CDS | 45.0% | |
| ACGATGCCAAAGTGAGAAAC+AGG | - | chr5_4:5600882-5600901 | Msa0832570:CDS | 45.0% | |
| ! | CTGTGACCTGTTTCTCACTT+TGG | + | chr5_4:5600891-5600910 | None:intergenic | 45.0% |
| AGTGAGAAACAGGTCACAGT+TGG | - | chr5_4:5600892-5600911 | Msa0832570:CDS | 45.0% | |
| AACAGGTCACAGTTGGAAAG+TGG | - | chr5_4:5600899-5600918 | Msa0832570:CDS | 45.0% | |
| GCGGAGATGAACACTCATAT+TGG | + | chr5_4:5601417-5601436 | None:intergenic | 45.0% | |
| ATGTCATTCATAGCAGCAGG+CGG | + | chr5_4:5601436-5601455 | None:intergenic | 45.0% | |
| CAGAAGATTAGAGGAGGAGA+TGG | - | chr5_4:5601552-5601571 | Msa0832570:CDS | 45.0% | |
| TACAGCTGAAAGGCTTCAAG+AGG | - | chr5_4:5601696-5601715 | Msa0832570:CDS | 45.0% | |
| TAGACGCAGTTCACTTGCTT+CGG | + | chr5_4:5601794-5601813 | None:intergenic | 45.0% | |
| TCAGATACAGCAGATGTTGG+TGG | - | chr5_4:5601930-5601949 | Msa0832570:intron | 45.0% | |
| TGCGTCATTGAAGAAGGAAG+CGG | - | chr5_4:5602209-5602228 | Msa0832570:CDS | 45.0% | |
| CCTGAATCTCTTCTCAATGC+TGG | + | chr5_4:5602445-5602464 | None:intergenic | 45.0% | |
| ! | CCAGCATTGAGAAGAGATTC+AGG | - | chr5_4:5602442-5602461 | Msa0832570:intron | 45.0% |
| TCAGGGCCTGATAAAGTCAA+AGG | - | chr5_4:5602747-5602766 | Msa0832570:intron | 45.0% | |
| GGAACTTCAGAGCAGAATTG+TGG | - | chr5_4:5602816-5602835 | Msa0832570:CDS | 45.0% | |
| GGAACTTCAGAGCAGAATTG+TGG | - | chr5_4:5602816-5602835 | Msa0832570:CDS | 45.0% | |
| GCCCTTCAAATTGGTTGTTC+AGG | - | chr5_4:5603262-5603281 | Msa0832570:intron | 45.0% | |
| GACCGAATTGTCGTCATTGA+AGG | - | chr5_4:5603370-5603389 | Msa0832570:intron | 45.0% | |
| TTGTCTTTCACCTTCGACCT+CGG | + | chr5_4:5603468-5603487 | None:intergenic | 45.0% | |
| GAGAAAACTCTCAGCCCTTA+TGG | + | chr5_4:5603526-5603545 | None:intergenic | 45.0% | |
| GCAGGCTCCAATATATCAAG+AGG | + | chr5_4:5603548-5603567 | None:intergenic | 45.0% | |
| !! | AAAAAAACTATTATTAATAA+AGG | + | chr5_4:5599054-5599073 | None:intergenic | 5.0% |
| TCGGTGGTTGATCAACTCGT+TGG | + | chr5_4:5598574-5598593 | None:intergenic | 50.0% | |
| !! | GTTGGTCTTCCAATGTCACC+AGG | + | chr5_4:5599327-5599346 | None:intergenic | 50.0% |
| GGGGTTATCAAAAGCTAGCG+CGG | - | chr5_4:5599572-5599591 | Msa0832570:intron | 50.0% | |
| TATCAAAAGCTAGCGCGGTC+GGG | - | chr5_4:5599577-5599596 | Msa0832570:intron | 50.0% | |
| AGAGACATGAGAGGGCTTTG+TGG | + | chr5_4:5599637-5599656 | None:intergenic | 50.0% | |
| GATGGGAAGAGAGACATGAG+AGG | + | chr5_4:5599646-5599665 | None:intergenic | 50.0% | |
| CTCATGTCTCTCTTCCCATC+AGG | - | chr5_4:5599646-5599665 | Msa0832570:intron | 50.0% | |
| CTGTATCGCCGTTGCTGAAT+TGG | + | chr5_4:5600056-5600075 | None:intergenic | 50.0% | |
| GGGCCATAACTGGAACAAAC+TGG | + | chr5_4:5600481-5600500 | None:intergenic | 50.0% | |
| AGCAGCATTTGGAGATTCCG+CGG | + | chr5_4:5600507-5600526 | None:intergenic | 50.0% | |
| ! | TCGTCATCTAGCTCAGAGCT+CGG | - | chr5_4:5600578-5600597 | Msa0832570:CDS | 50.0% |
| CTCAGAGCTCGGGTTAAGTA+TGG | - | chr5_4:5600589-5600608 | Msa0832570:CDS | 50.0% | |
| TGCCTCTTGGGAACTTTCCT+TGG | + | chr5_4:5600648-5600667 | None:intergenic | 50.0% | |
| !! | TTCCCAAGAGGCATCCCATT+TGG | - | chr5_4:5600655-5600674 | Msa0832570:CDS | 50.0% |
| CTCCAAATGGGATGCCTCTT+GGG | + | chr5_4:5600660-5600679 | None:intergenic | 50.0% | |
| TCTCCAAATGGGATGCCTCT+TGG | + | chr5_4:5600661-5600680 | None:intergenic | 50.0% | |
| !! | AGAGGCATCCCATTTGGAGA+TGG | - | chr5_4:5600661-5600680 | Msa0832570:CDS | 50.0% |
| AAGAGGGCAGGATCTCATGA+AGG | - | chr5_4:5600781-5600800 | Msa0832570:CDS | 50.0% | |
| CAGGTCTTTCCACAAACGCA+TGG | - | chr5_4:5600859-5600878 | Msa0832570:CDS | 50.0% | |
| ! | TGAATTGGTTCTTGCCGTGC+AGG | - | chr5_4:5601027-5601046 | Msa0832570:CDS | 50.0% |
| TCTGCTCCAACATCTCTTCC+AGG | + | chr5_4:5601054-5601073 | None:intergenic | 50.0% | |
| GCTAGAGCAAAGCCAATTGC+AGG | - | chr5_4:5601378-5601397 | Msa0832570:CDS | 50.0% | |
| AGAACTCAAGGAGCAGTCAG+AGG | - | chr5_4:5601483-5601502 | Msa0832570:CDS | 50.0% | |
| GGTCTTTCGCAATGCTTCCT+CGG | + | chr5_4:5601659-5601678 | None:intergenic | 50.0% | |
| TGCTTCGGTCAATGCTCTCA+TGG | + | chr5_4:5601779-5601798 | None:intergenic | 50.0% | |
| GGACGCAACCAACTTTCTGA+TGG | - | chr5_4:5602474-5602493 | Msa0832570:intron | 50.0% | |
| TCAGAGCAGAATTGTGGAGC+TGG | - | chr5_4:5602822-5602841 | Msa0832570:CDS | 50.0% | |
| TGTGGAGCTGGAGAACAAAG+TGG | - | chr5_4:5602834-5602853 | Msa0832570:CDS | 50.0% | |
| TCAGAGCAGAATTGTGGAGC+TGG | - | chr5_4:5602822-5602841 | Msa0832570:CDS | 50.0% | |
| TGTGGAGCTGGAGAACAAAG+TGG | - | chr5_4:5602834-5602853 | Msa0832570:CDS | 50.0% | |
| GAACACGCGGACAATAGTCT+TGG | - | chr5_4:5603338-5603357 | Msa0832570:intron | 50.0% | |
| CTCAAATTTGCCGAGGTCGA+AGG | - | chr5_4:5603455-5603474 | Msa0832570:CDS | 50.0% | |
| AGCCCTTATGGACACTCTTG+AGG | + | chr5_4:5603514-5603533 | None:intergenic | 50.0% | |
| CTGCTACAGCTATACACTGC+AGG | + | chr5_4:5603566-5603585 | None:intergenic | 50.0% | |
| CTGCAGTGTATAGCTGTAGC+AGG | - | chr5_4:5603564-5603583 | Msa0832570:five_prime_UTR | 50.0% | |
| ATCAAAAGCTAGCGCGGTCG+GGG | - | chr5_4:5599578-5599597 | Msa0832570:intron | 55.0% | |
| ATTTGGAGATTCCGCGGCAC+GGG | + | chr5_4:5600501-5600520 | None:intergenic | 55.0% | |
| CATTTGGAGATTCCGCGGCA+CGG | + | chr5_4:5600502-5600521 | None:intergenic | 55.0% | |
| ! | CGTCATCTAGCTCAGAGCTC+GGG | - | chr5_4:5600579-5600598 | Msa0832570:CDS | 55.0% |
| TGGCATCGTCCATGCGTTTG+TGG | + | chr5_4:5600871-5600890 | None:intergenic | 55.0% | |
| CATCTCTTCCAGGTCCTGCA+CGG | + | chr5_4:5601044-5601063 | None:intergenic | 55.0% | |
| GCAGGACCTGGAAGAGATGT+TGG | - | chr5_4:5601045-5601064 | Msa0832570:CDS | 55.0% | |
| !! | CAATGCTTCCTCGGCTTGGA+TGG | + | chr5_4:5601650-5601669 | None:intergenic | 55.0% |
| TTCGCAATGCTTCCTCGGCT+TGG | + | chr5_4:5601654-5601673 | None:intergenic | 55.0% | |
| GGAGCTGGAGAACAAAGTGG+AGG | - | chr5_4:5602837-5602856 | Msa0832570:CDS | 55.0% | |
| GGAGCTGGAGAACAAAGTGG+AGG | - | chr5_4:5602837-5602856 | Msa0832570:CDS | 55.0% | |
| ! | CACGCGGACAATAGTCTTGG+TGG | - | chr5_4:5603341-5603360 | Msa0832570:intron | 55.0% |
| GCAGGTGTACTTTGCAGCAG+TGG | - | chr5_4:5603582-5603601 | Msa0832570:five_prime_UTR | 55.0% | |
| ! | CTGAACTCGCTGCTTTGGCG+AGG | - | chr5_4:5600696-5600715 | Msa0832570:CDS | 60.0% |
| GCACGTGGATGTGTCGGACA+TGG | - | chr5_4:5600718-5600737 | Msa0832570:CDS | 60.0% | |
| GCAAAGAGCCATCCAAGCCG+AGG | - | chr5_4:5601639-5601658 | Msa0832570:CDS | 60.0% | |
| TCCAGTTATGGCCCGTGCCG+CGG | - | chr5_4:5600487-5600506 | Msa0832570:CDS | 65.0% | |
| GGCGAGGCACGTGGATGTGT+CGG | - | chr5_4:5600712-5600731 | Msa0832570:CDS | 65.0% | |
| GGTTCTTGCCGTGCAGGACC+TGG | - | chr5_4:5601033-5601052 | Msa0832570:CDS | 65.0% | |
| TCCGCGGCACGGGCCATAAC+TGG | + | chr5_4:5600491-5600510 | None:intergenic | 70.0% | |
| ! | CGCTGCTTTGGCGAGGCACG+TGG | - | chr5_4:5600703-5600722 | Msa0832570:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 5598415 | 5603825 | 5598415 | ID=Msa0832570;Name=Msa0832570 |
| chr5_4 | mRNA | 5598415 | 5603825 | 5598415 | ID=Msa0832570-mRNA-1;Parent=Msa0832570;Name=Msa0832570-mRNA-1;_AED=0.04;_eAED=0.04;_QI=324|0.87|0.88|1|1|1|9|290|1100 |
| chr5_4 | exon | 5598415 | 5598956 | 5598415 | ID=Msa0832570-mRNA-1:exon:2432;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5599162 | 5599269 | 5599162 | ID=Msa0832570-mRNA-1:exon:2431;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5599352 | 5599489 | 5599352 | ID=Msa0832570-mRNA-1:exon:2430;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5599650 | 5601899 | 5599650 | ID=Msa0832570-mRNA-1:exon:2429;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5602136 | 5602244 | 5602136 | ID=Msa0832570-mRNA-1:exon:2428;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5602361 | 5602404 | 5602361 | ID=Msa0832570-mRNA-1:exon:2427;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5602545 | 5602667 | 5602545 | ID=Msa0832570-mRNA-1:exon:2426;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5602758 | 5602958 | 5602758 | ID=Msa0832570-mRNA-1:exon:2425;Parent=Msa0832570-mRNA-1 |
| chr5_4 | exon | 5603424 | 5603825 | 5603424 | ID=Msa0832570-mRNA-1:exon:2424;Parent=Msa0832570-mRNA-1 |
| chr5_4 | five_prime_UTR | 5603502 | 5603825 | 5603502 | ID=Msa0832570-mRNA-1:five_prime_utr;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5603424 | 5603501 | 5603424 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5602758 | 5602958 | 5602758 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5602545 | 5602667 | 5602545 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5602361 | 5602404 | 5602361 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5602136 | 5602244 | 5602136 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5599650 | 5601899 | 5599650 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5599352 | 5599489 | 5599352 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5599162 | 5599269 | 5599162 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | CDS | 5598705 | 5598956 | 5598705 | ID=Msa0832570-mRNA-1:cds;Parent=Msa0832570-mRNA-1 |
| chr5_4 | three_prime_UTR | 5598415 | 5598704 | 5598415 | ID=Msa0832570-mRNA-1:three_prime_utr;Parent=Msa0832570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
