Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881030 | XP_003618022.1 | 99.550 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881030 | sp|Q9FKI0|FIMB5_ARATH | 79.116 | 656 | 135 | 2 | 1 | 656 | 1 | 654 | 0.0 | 1082 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881030 | G7K508 | 99.550 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0881030 | -0.824340 | 8.512586e-54 | -8.615850e-47 |
| Msa0018620 | Msa0881030 | 0.826865 | 2.145805e-54 | -8.615850e-47 |
| Msa0027390 | Msa0881030 | 0.811668 | 6.238610e-51 | -8.615850e-47 |
| Msa0041970 | Msa0881030 | 0.804767 | 1.844762e-49 | -8.615850e-47 |
| Msa0044020 | Msa0881030 | 0.803684 | 3.100233e-49 | -8.615850e-47 |
| Msa0047980 | Msa0881030 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
| Msa0071240 | Msa0881030 | 0.827482 | 1.526926e-54 | -8.615850e-47 |
| Msa0076000 | Msa0881030 | 0.840839 | 6.827908e-58 | -8.615850e-47 |
| Msa0077200 | Msa0881030 | 0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0077450 | Msa0881030 | 0.812468 | 4.175748e-51 | -8.615850e-47 |
| Msa0079400 | Msa0881030 | 0.812482 | 4.146738e-51 | -8.615850e-47 |
| Msa0089360 | Msa0881030 | 0.810746 | 9.886544e-51 | -8.615850e-47 |
| Msa0094920 | Msa0881030 | 0.842943 | 1.898443e-58 | -8.615850e-47 |
| Msa0105420 | Msa0881030 | 0.801967 | 7.013498e-49 | -8.615850e-47 |
| Msa0108870 | Msa0881030 | 0.800129 | 1.665610e-48 | -8.615850e-47 |
| Msa0619070 | Msa0881030 | 0.816920 | 4.312855e-52 | -8.615850e-47 |
| Msa0621590 | Msa0881030 | 0.819085 | 1.397366e-52 | -8.615850e-47 |
| Msa0623700 | Msa0881030 | 0.810495 | 1.120693e-50 | -8.615850e-47 |
| Msa0626850 | Msa0881030 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0638070 | Msa0881030 | 0.816037 | 6.797376e-52 | -8.615850e-47 |
| Msa0638280 | Msa0881030 | 0.825433 | 4.699944e-54 | -8.615850e-47 |
| Msa0638320 | Msa0881030 | 0.826479 | 2.652070e-54 | -8.615850e-47 |
| Msa0642720 | Msa0881030 | 0.818936 | 1.511389e-52 | -8.615850e-47 |
| Msa0643250 | Msa0881030 | 0.840247 | 9.756131e-58 | -8.615850e-47 |
| Msa0646130 | Msa0881030 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
| Msa0657750 | Msa0881030 | 0.805797 | 1.122395e-49 | -8.615850e-47 |
| Msa0659600 | Msa0881030 | 0.812264 | 4.626351e-51 | -8.615850e-47 |
| Msa0660300 | Msa0881030 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
| Msa0677270 | Msa0881030 | 0.828752 | 7.549828e-55 | -8.615850e-47 |
| Msa0679550 | Msa0881030 | 0.809619 | 1.730049e-50 | -8.615850e-47 |
| Msa0681800 | Msa0881030 | 0.806662 | 7.377747e-50 | -8.615850e-47 |
| Msa0682950 | Msa0881030 | 0.847608 | 1.038318e-59 | -8.615850e-47 |
| Msa0684500 | Msa0881030 | 0.801971 | 6.999956e-49 | -8.615850e-47 |
| Msa0688070 | Msa0881030 | 0.801371 | 9.292829e-49 | -8.615850e-47 |
| Msa0692230 | Msa0881030 | 0.800412 | 1.458927e-48 | -8.615850e-47 |
| Msa0693380 | Msa0881030 | 0.817350 | 3.451661e-52 | -8.615850e-47 |
| Msa0694840 | Msa0881030 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0704600 | Msa0881030 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
| Msa0706370 | Msa0881030 | 0.806420 | 8.299093e-50 | -8.615850e-47 |
| Msa0711490 | Msa0881030 | 0.824818 | 6.566940e-54 | -8.615850e-47 |
| Msa0715110 | Msa0881030 | 0.848787 | 4.906621e-60 | -8.615850e-47 |
| Msa0724830 | Msa0881030 | 0.836800 | 7.566151e-57 | -8.615850e-47 |
| Msa0726860 | Msa0881030 | 0.816088 | 6.623415e-52 | -8.615850e-47 |
| Msa0737560 | Msa0881030 | 0.834881 | 2.319053e-56 | -8.615850e-47 |
| Msa0743200 | Msa0881030 | 0.807593 | 4.685880e-50 | -8.615850e-47 |
| Msa0743260 | Msa0881030 | 0.812679 | 3.754465e-51 | -8.615850e-47 |
| Msa0750350 | Msa0881030 | 0.811632 | 6.352436e-51 | -8.615850e-47 |
| Msa0750880 | Msa0881030 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0750920 | Msa0881030 | 0.811750 | 5.987960e-51 | -8.615850e-47 |
| Msa0753770 | Msa0881030 | 0.801693 | 7.982683e-49 | -8.615850e-47 |
| Msa0754720 | Msa0881030 | -0.810147 | 1.331937e-50 | -8.615850e-47 |
| Msa0760380 | Msa0881030 | 0.803790 | 2.946036e-49 | -8.615850e-47 |
| Msa0762210 | Msa0881030 | 0.804355 | 2.248412e-49 | -8.615850e-47 |
| Msa0770350 | Msa0881030 | 0.956430 | 3.003044e-114 | -8.615850e-47 |
| Msa0777050 | Msa0881030 | 0.802207 | 6.258492e-49 | -8.615850e-47 |
| Msa0777990 | Msa0881030 | 0.804375 | 2.226625e-49 | -8.615850e-47 |
| Msa0778320 | Msa0881030 | 0.832053 | 1.176829e-55 | -8.615850e-47 |
| Msa0786270 | Msa0881030 | 0.821265 | 4.425240e-53 | -8.615850e-47 |
| Msa0788710 | Msa0881030 | 0.824948 | 6.120075e-54 | -8.615850e-47 |
| Msa0792090 | Msa0881030 | 0.840645 | 7.676923e-58 | -8.615850e-47 |
| Msa0793390 | Msa0881030 | 0.805024 | 1.630169e-49 | -8.615850e-47 |
| Msa0814250 | Msa0881030 | 0.801848 | 7.417479e-49 | -8.615850e-47 |
| Msa0814320 | Msa0881030 | 0.825036 | 5.834782e-54 | -8.615850e-47 |
| Msa0816700 | Msa0881030 | 0.835708 | 1.434127e-56 | -8.615850e-47 |
| Msa0823090 | Msa0881030 | 0.803250 | 3.812703e-49 | -8.615850e-47 |
| Msa0824660 | Msa0881030 | 0.808385 | 3.179503e-50 | -8.615850e-47 |
| Msa0826190 | Msa0881030 | 0.914616 | 1.554505e-84 | -8.615850e-47 |
| Msa0828920 | Msa0881030 | 0.805564 | 1.256213e-49 | -8.615850e-47 |
| Msa0829620 | Msa0881030 | 0.807803 | 4.227753e-50 | -8.615850e-47 |
| Msa0832570 | Msa0881030 | 0.800613 | 1.327293e-48 | -8.615850e-47 |
| Msa0123100 | Msa0881030 | 0.803992 | 2.675074e-49 | -8.615850e-47 |
| Msa0124340 | Msa0881030 | 0.814296 | 1.655674e-51 | -8.615850e-47 |
| Msa0165300 | Msa0881030 | 0.825142 | 5.507427e-54 | -8.615850e-47 |
| Msa0165970 | Msa0881030 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0170140 | Msa0881030 | 0.814801 | 1.280604e-51 | -8.615850e-47 |
| Msa0172780 | Msa0881030 | 0.809660 | 1.695151e-50 | -8.615850e-47 |
| Msa0173990 | Msa0881030 | 0.800485 | 1.410072e-48 | -8.615850e-47 |
| Msa0183590 | Msa0881030 | 0.823463 | 1.366879e-53 | -8.615850e-47 |
| Msa0183600 | Msa0881030 | 0.806707 | 7.217560e-50 | -8.615850e-47 |
| Msa0184020 | Msa0881030 | 0.803546 | 3.310623e-49 | -8.615850e-47 |
| Msa0188630 | Msa0881030 | 0.826983 | 2.010173e-54 | -8.615850e-47 |
| Msa0191250 | Msa0881030 | 0.802922 | 4.458269e-49 | -8.615850e-47 |
| Msa0192060 | Msa0881030 | 0.811521 | 6.714943e-51 | -8.615850e-47 |
| Msa0205850 | Msa0881030 | 0.844649 | 6.634286e-59 | -8.615850e-47 |
| Msa0215840 | Msa0881030 | 0.802845 | 4.623049e-49 | -8.615850e-47 |
| Msa0223380 | Msa0881030 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0223740 | Msa0881030 | 0.807367 | 5.233650e-50 | -8.615850e-47 |
| Msa0224150 | Msa0881030 | 0.808530 | 2.960463e-50 | -8.615850e-47 |
| Msa0227400 | Msa0881030 | 0.823939 | 1.057170e-53 | -8.615850e-47 |
| Msa0232320 | Msa0881030 | 0.842126 | 3.128576e-58 | -8.615850e-47 |
| Msa0235890 | Msa0881030 | 0.821805 | 3.320982e-53 | -8.615850e-47 |
| Msa0369850 | Msa0881030 | 0.800969 | 1.122884e-48 | -8.615850e-47 |
| Msa0372660 | Msa0881030 | 0.833834 | 4.247939e-56 | -8.615850e-47 |
| Msa0372670 | Msa0881030 | 0.827580 | 1.446303e-54 | -8.615850e-47 |
| Msa0380040 | Msa0881030 | 0.812317 | 4.505542e-51 | -8.615850e-47 |
| Msa0395870 | Msa0881030 | 0.837448 | 5.166700e-57 | -8.615850e-47 |
| Msa0402330 | Msa0881030 | 0.825019 | 5.889872e-54 | -8.615850e-47 |
| Msa0413450 | Msa0881030 | 0.807609 | 4.648446e-50 | -8.615850e-47 |
| Msa0417880 | Msa0881030 | 0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0423900 | Msa0881030 | 0.800179 | 1.627541e-48 | -8.615850e-47 |
| Msa0426330 | Msa0881030 | 0.839516 | 1.512289e-57 | -8.615850e-47 |
| Msa0429290 | Msa0881030 | 0.809183 | 2.145603e-50 | -8.615850e-47 |
| Msa0431670 | Msa0881030 | 0.800088 | 1.698337e-48 | -8.615850e-47 |
| Msa0432770 | Msa0881030 | 0.809581 | 1.762832e-50 | -8.615850e-47 |
| Msa0464900 | Msa0881030 | 0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0467960 | Msa0881030 | -0.804575 | 2.022541e-49 | -8.615850e-47 |
| Msa0469910 | Msa0881030 | -0.803584 | 3.251425e-49 | -8.615850e-47 |
| Msa0475580 | Msa0881030 | 0.803487 | 3.405515e-49 | -8.615850e-47 |
| Msa0480320 | Msa0881030 | 0.803595 | 3.233835e-49 | -8.615850e-47 |
| Msa0239510 | Msa0881030 | 0.817924 | 2.562216e-52 | -8.615850e-47 |
| Msa0245940 | Msa0881030 | 0.809632 | 1.719239e-50 | -8.615850e-47 |
| Msa0248980 | Msa0881030 | 0.849669 | 2.788247e-60 | -8.615850e-47 |
| Msa0260210 | Msa0881030 | 0.838220 | 3.272466e-57 | -8.615850e-47 |
| Msa0260830 | Msa0881030 | 0.812098 | 5.029935e-51 | -8.615850e-47 |
| Msa0266210 | Msa0881030 | 0.805165 | 1.523019e-49 | -8.615850e-47 |
| Msa0270100 | Msa0881030 | 0.815667 | 8.219970e-52 | -8.615850e-47 |
| Msa0270270 | Msa0881030 | 0.807461 | 4.999310e-50 | -8.615850e-47 |
| Msa0274350 | Msa0881030 | 0.801575 | 8.438470e-49 | -8.615850e-47 |
| Msa0276920 | Msa0881030 | 0.847177 | 1.363846e-59 | -8.615850e-47 |
| Msa0284520 | Msa0881030 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
| Msa0287310 | Msa0881030 | 0.864589 | 1.090320e-64 | -8.615850e-47 |
| Msa0291520 | Msa0881030 | 0.805861 | 1.088049e-49 | -8.615850e-47 |
| Msa0294150 | Msa0881030 | 0.816363 | 5.748744e-52 | -8.615850e-47 |
| Msa0294390 | Msa0881030 | 0.806677 | 7.324329e-50 | -8.615850e-47 |
| Msa0299580 | Msa0881030 | 0.808881 | 2.490692e-50 | -8.615850e-47 |
| Msa0299730 | Msa0881030 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0302980 | Msa0881030 | 0.816185 | 6.299482e-52 | -8.615850e-47 |
| Msa0304290 | Msa0881030 | 0.838487 | 2.792794e-57 | -8.615850e-47 |
| Msa0304330 | Msa0881030 | 0.838211 | 3.289621e-57 | -8.615850e-47 |
| Msa0305890 | Msa0881030 | 0.844869 | 5.787141e-59 | -8.615850e-47 |
| Msa0311860 | Msa0881030 | 0.816466 | 5.449927e-52 | -8.615850e-47 |
| Msa0316800 | Msa0881030 | 0.817363 | 3.427807e-52 | -8.615850e-47 |
| Msa0317390 | Msa0881030 | 0.801465 | 8.889739e-49 | -8.615850e-47 |
| Msa0317730 | Msa0881030 | 0.800419 | 1.454179e-48 | -8.615850e-47 |
| Msa0321170 | Msa0881030 | 0.817111 | 3.905583e-52 | -8.615850e-47 |
| Msa0321190 | Msa0881030 | 0.817436 | 3.300485e-52 | -8.615850e-47 |
| Msa0325850 | Msa0881030 | 0.862268 | 5.714280e-64 | -8.615850e-47 |
| Msa0329320 | Msa0881030 | 0.811627 | 6.369803e-51 | -8.615850e-47 |
| Msa0334350 | Msa0881030 | 0.806379 | 8.464972e-50 | -8.615850e-47 |
| Msa0335040 | Msa0881030 | 0.830309 | 3.158158e-55 | -8.615850e-47 |
| Msa0340810 | Msa0881030 | 0.842480 | 2.520783e-58 | -8.615850e-47 |
| Msa0342100 | Msa0881030 | 0.819400 | 1.184883e-52 | -8.615850e-47 |
| Msa0344870 | Msa0881030 | 0.806637 | 7.468375e-50 | -8.615850e-47 |
| Msa0351080 | Msa0881030 | 0.802254 | 6.122937e-49 | -8.615850e-47 |
| Msa0355270 | Msa0881030 | 0.826095 | 3.273033e-54 | -8.615850e-47 |
| Msa0484780 | Msa0881030 | 0.838969 | 2.097108e-57 | -8.615850e-47 |
| Msa0489030 | Msa0881030 | 0.812022 | 5.225374e-51 | -8.615850e-47 |
| Msa0505060 | Msa0881030 | 0.819596 | 1.069095e-52 | -8.615850e-47 |
| Msa0505770 | Msa0881030 | 0.812851 | 3.443656e-51 | -8.615850e-47 |
| Msa0506890 | Msa0881030 | 0.808613 | 2.841709e-50 | -8.615850e-47 |
| Msa0513440 | Msa0881030 | 0.805439 | 1.334177e-49 | -8.615850e-47 |
| Msa0514180 | Msa0881030 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0519220 | Msa0881030 | 0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0521880 | Msa0881030 | 0.807038 | 6.144031e-50 | -8.615850e-47 |
| Msa0526890 | Msa0881030 | 0.837854 | 4.065921e-57 | -8.615850e-47 |
| Msa0546300 | Msa0881030 | 0.829243 | 5.739837e-55 | -8.615850e-47 |
| Msa0547400 | Msa0881030 | 0.840847 | 6.792953e-58 | -8.615850e-47 |
| Msa0557070 | Msa0881030 | 0.805793 | 1.124448e-49 | -8.615850e-47 |
| Msa0562440 | Msa0881030 | 0.813093 | 3.047493e-51 | -8.615850e-47 |
| Msa0568820 | Msa0881030 | 0.819534 | 1.104138e-52 | -8.615850e-47 |
| Msa0577220 | Msa0881030 | 0.819681 | 1.022445e-52 | -8.615850e-47 |
| Msa0585900 | Msa0881030 | 0.802901 | 4.501757e-49 | -8.615850e-47 |
| Msa0598460 | Msa0881030 | 0.807322 | 5.348775e-50 | -8.615850e-47 |
| Msa0602120 | Msa0881030 | 0.843182 | 1.639349e-58 | -8.615850e-47 |
| Msa0846140 | Msa0881030 | 0.827225 | 1.759402e-54 | -8.615850e-47 |
| Msa0850960 | Msa0881030 | 0.809550 | 1.790282e-50 | -8.615850e-47 |
| Msa0856910 | Msa0881030 | 0.832894 | 7.284704e-56 | -8.615850e-47 |
| Msa0856920 | Msa0881030 | 0.802967 | 4.363639e-49 | -8.615850e-47 |
| Msa0861830 | Msa0881030 | 0.810886 | 9.221335e-51 | -8.615850e-47 |
| Msa0863370 | Msa0881030 | 0.834931 | 2.253443e-56 | -8.615850e-47 |
| Msa0863870 | Msa0881030 | 0.842404 | 2.640333e-58 | -8.615850e-47 |
| Msa0863930 | Msa0881030 | 0.800267 | 1.561166e-48 | -8.615850e-47 |
| Msa0867890 | Msa0881030 | 0.806097 | 9.706505e-50 | -8.615850e-47 |
| Msa0876200 | Msa0881030 | 0.805541 | 1.270281e-49 | -8.615850e-47 |
| Msa0881020 | Msa0881030 | 0.971696 | 1.427322e-133 | -8.615850e-47 |
| Msa0881030 | Msa0893810 | 0.838197 | 3.317479e-57 | -8.615850e-47 |
| Msa0881030 | Msa0896750 | 0.828077 | 1.098301e-54 | -8.615850e-47 |
| Msa0881030 | Msa0899230 | 0.822774 | 1.979226e-53 | -8.615850e-47 |
| Msa0881030 | Msa0908050 | 0.806457 | 8.149900e-50 | -8.615850e-47 |
| Msa0881030 | Msa0908170 | 0.819833 | 9.436339e-53 | -8.615850e-47 |
| Msa0881030 | Msa0923330 | 0.822716 | 2.041169e-53 | -8.615850e-47 |
| Msa0881030 | Msa0927670 | 0.805857 | 1.090011e-49 | -8.615850e-47 |
| Msa0881030 | Msa0932350 | 0.824660 | 7.157633e-54 | -8.615850e-47 |
| Msa0881030 | Msa0933440 | 0.818735 | 1.678696e-52 | -8.615850e-47 |
| Msa0881030 | Msa0937670 | 0.809884 | 1.517643e-50 | -8.615850e-47 |
| Msa0881030 | Msa0939790 | 0.811143 | 8.112281e-51 | -8.615850e-47 |
| Msa0881030 | Msa0945840 | 0.837130 | 6.231360e-57 | -8.615850e-47 |
| Msa0881030 | Msa0959010 | 0.845769 | 3.302046e-59 | -8.615850e-47 |
| Msa0881030 | Msa0960160 | 0.833278 | 5.846489e-56 | -8.615850e-47 |
| Msa0881030 | Msa0970320 | 0.801982 | 6.963560e-49 | -8.615850e-47 |
| Msa0881030 | Msa0986920 | 0.813749 | 2.186385e-51 | -8.615850e-47 |
| Msa0881030 | Msa0993530 | 0.861261 | 1.161877e-63 | -8.615850e-47 |
| Msa0881030 | Msa0999040 | 0.807298 | 5.410883e-50 | -8.615850e-47 |
| Msa0881030 | Msa1021540 | 0.801497 | 8.756758e-49 | -8.615850e-47 |
| Msa0881030 | Msa1026760 | 0.803342 | 3.649176e-49 | -8.615850e-47 |
| Msa0881030 | Msa1026790 | 0.800847 | 1.189292e-48 | -8.615850e-47 |
| Msa0881030 | Msa1036410 | 0.801617 | 8.275905e-49 | -8.615850e-47 |
| Msa0881030 | Msa1037700 | -0.819631 | 1.049610e-52 | -8.615850e-47 |
| Msa0881030 | Msa1040890 | 0.832590 | 8.665021e-56 | -8.615850e-47 |
| Msa0881030 | Msa1046300 | 0.811027 | 8.596589e-51 | -8.615850e-47 |
| Msa0881030 | Msa1082500 | 0.837043 | 6.558280e-57 | -8.615850e-47 |
| Msa0881030 | Msa1083210 | 0.810239 | 1.272514e-50 | -8.615850e-47 |
| Msa0881030 | Msa1111110 | 0.804782 | 1.831403e-49 | -8.615850e-47 |
| Msa0881030 | Msa1119200 | 0.809484 | 1.849205e-50 | -8.615850e-47 |
| Msa0881030 | Msa1124310 | 0.828290 | 9.759795e-55 | -8.615850e-47 |
| Msa0881030 | Msa1127830 | 0.833175 | 6.202224e-56 | -8.615850e-47 |
| Msa0881030 | Msa1130210 | -0.837512 | 4.974526e-57 | -8.615850e-47 |
| Msa0881030 | Msa1155230 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0881030 | Msa1165520 | 0.804096 | 2.545215e-49 | -8.615850e-47 |
| Msa0881030 | Msa1171870 | 0.800738 | 1.252152e-48 | -8.615850e-47 |
| Msa0881030 | Msa1172230 | 0.819167 | 1.338510e-52 | -8.615850e-47 |
| Msa0881030 | Msa1179940 | 0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0881030 | Msa1179970 | 0.803054 | 4.186812e-49 | -8.615850e-47 |
| Msa0881030 | Msa1185540 | 0.829175 | 5.963314e-55 | -8.615850e-47 |
| Msa0881030 | Msa1199220 | 0.801155 | 1.028728e-48 | -8.615850e-47 |
| Msa0881030 | Msa1199560 | 0.827595 | 1.434099e-54 | -8.615850e-47 |
| Msa0881030 | Msa1203250 | 0.806317 | 8.723621e-50 | -8.615850e-47 |
| Msa0881030 | Msa1214890 | 0.801850 | 7.413083e-49 | -8.615850e-47 |
| Msa0881030 | Msa1217660 | 0.837895 | 3.968870e-57 | -8.615850e-47 |
| Msa0881030 | Msa1217830 | 0.846782 | 1.749442e-59 | -8.615850e-47 |
| Msa0881030 | Msa1217860 | 0.811273 | 7.603196e-51 | -8.615850e-47 |
| Msa0881030 | Msa1224480 | 0.803603 | 3.222219e-49 | -8.615850e-47 |
| Msa0881030 | Msa1224830 | 0.809395 | 1.932757e-50 | -8.615850e-47 |
| Msa0881030 | Msa1233500 | 0.821088 | 4.862812e-53 | -8.615850e-47 |
| Msa0881030 | Msa1233890 | 0.802420 | 5.658044e-49 | -8.615850e-47 |
| Msa0881030 | Msa1249920 | 0.830750 | 2.462578e-55 | -8.615850e-47 |
| Msa0881030 | Msa1252190 | 0.801202 | 1.006138e-48 | -8.615850e-47 |
| Msa0881030 | Msa1254710 | 0.810806 | 9.598551e-51 | -8.615850e-47 |
| Msa0881030 | Msa1267260 | 0.823403 | 1.411647e-53 | -8.615850e-47 |
| Msa0881030 | Msa1267840 | 0.834021 | 3.812630e-56 | -8.615850e-47 |
| Msa0881030 | Msa1276440 | 0.810360 | 1.198196e-50 | -8.615850e-47 |
| Msa0881030 | Msa1279210 | 0.818442 | 1.956332e-52 | -8.615850e-47 |
| Msa0881030 | Msa1280560 | 0.824059 | 9.908037e-54 | -8.615850e-47 |
| Msa0881030 | Msa1291350 | 0.804971 | 1.672116e-49 | -8.615850e-47 |
| Msa0881030 | Msa1300860 | 0.801590 | 8.379909e-49 | -8.615850e-47 |
| Msa0881030 | Msa1306750 | 0.821949 | 3.075279e-53 | -8.615850e-47 |
| Msa0881030 | Msa1314340 | 0.805142 | 1.539762e-49 | -8.615850e-47 |
| Msa0881030 | Msa1328700 | 0.823394 | 1.418361e-53 | -8.615850e-47 |
| Msa0881030 | Msa1331910 | 0.802744 | 4.851688e-49 | -8.615850e-47 |
| Msa0881030 | Msa1338250 | 0.811499 | 6.791158e-51 | -8.615850e-47 |
| Msa0881030 | Msa1340020 | 0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0881030 | Msa1343070 | 0.808066 | 3.716957e-50 | -8.615850e-47 |
| Msa0881030 | Msa1348360 | 0.811519 | 6.724400e-51 | -8.615850e-47 |
| Msa0881030 | Msa1353060 | 0.804063 | 2.586244e-49 | -8.615850e-47 |
| Msa0881030 | Msa1355700 | 0.804860 | 1.763865e-49 | -8.615850e-47 |
| Msa0881030 | Msa1358040 | 0.803222 | 3.863301e-49 | -8.615850e-47 |
| Msa0881030 | Msa1362510 | 0.815645 | 8.315023e-52 | -8.615850e-47 |
| Msa0881030 | Msa1366300 | 0.801812 | 7.546703e-49 | -8.615850e-47 |
| Msa0881030 | Msa1366600 | 0.806230 | 9.100980e-50 | -8.615850e-47 |
| Msa0881030 | Msa1371430 | 0.825108 | 5.611352e-54 | -8.615850e-47 |
| Msa0881030 | Msa1371640 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0881030 | Msa1373330 | 0.804583 | 2.015213e-49 | -8.615850e-47 |
| Msa0881030 | Msa1377660 | 0.820905 | 5.356885e-53 | -8.615850e-47 |
| Msa0881030 | Msa1385670 | 0.800520 | 1.387039e-48 | -8.615850e-47 |
| Msa0881030 | Msa1390230 | 0.801565 | 8.481585e-49 | -8.615850e-47 |
| Msa0881030 | Msa1394870 | 0.800635 | 1.314173e-48 | -8.615850e-47 |
| Msa0881030 | Msa1397810 | 0.811294 | 7.522294e-51 | -8.615850e-47 |
| Msa0881030 | Msa1402270 | 0.821149 | 4.706891e-53 | -8.615850e-47 |
| Msa0881030 | Msa1404730 | 0.813371 | 2.647608e-51 | -8.615850e-47 |
| Msa0881030 | Msa1415640 | 0.804910 | 1.721849e-49 | -8.615850e-47 |
| Msa0881030 | Msa1415940 | 0.811683 | 6.191569e-51 | -8.615850e-47 |
| Msa0881030 | Msa1416390 | 0.809549 | 1.791401e-50 | -8.615850e-47 |
| Msa0881030 | Msa1427060 | 0.813530 | 2.443285e-51 | -8.615850e-47 |
| Msa0881030 | Msa1431040 | 0.808146 | 3.574957e-50 | -8.615850e-47 |
| Msa0881030 | Msa1435370 | 0.801346 | 9.402744e-49 | -8.615850e-47 |
| Msa0881030 | Msa1439960 | 0.816917 | 4.319704e-52 | -8.615850e-47 |
| Msa0881030 | Msa1440910 | 0.801988 | 6.942010e-49 | -8.615850e-47 |
| Msa0881030 | Msa1441190 | 0.814968 | 1.175634e-51 | -8.615850e-47 |
| Msa0881030 | Msa1452470 | 0.809615 | 1.733222e-50 | -8.615850e-47 |
| Msa0881030 | Msa1466300 | 0.815134 | 1.080279e-51 | -8.615850e-47 |
| Msa0881030 | Msa1466460 | 0.824483 | 7.878982e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881030 | MtrunA17_Chr5g0448051 | 99.550 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1367 |
| Msa0881030 | MtrunA17_Chr5g0445111 | 69.412 | 680 | 193 | 2 | 1 | 665 | 1 | 680 | 0.0 | 996 |
| Msa0881030 | MtrunA17_Chr8g0338551 | 68.837 | 645 | 200 | 1 | 1 | 644 | 1 | 645 | 0.0 | 925 |
| Msa0881030 | MtrunA17_Chr7g0234481 | 67.470 | 664 | 205 | 4 | 1 | 661 | 1 | 656 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881030 | AT5G35700.1 | 79.116 | 656 | 135 | 2 | 1 | 656 | 1 | 654 | 0.0 | 1082 |
| Msa0881030 | AT2G04750.1 | 73.605 | 663 | 161 | 4 | 1 | 661 | 1 | 651 | 0.0 | 1003 |
| Msa0881030 | AT4G26700.4 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| Msa0881030 | AT4G26700.2 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| Msa0881030 | AT4G26700.1 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| Msa0881030 | AT5G55400.1 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| Msa0881030 | AT5G55400.2 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| Msa0881030 | AT5G55400.3 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| Msa0881030 | AT5G48460.1 | 66.261 | 658 | 216 | 3 | 1 | 656 | 1 | 654 | 0.0 | 903 |
| Msa0881030 | AT4G26700.5 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| Msa0881030 | AT4G26700.6 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| Msa0881030 | AT4G26700.3 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| Msa0881030 | AT4G26700.7 | 71.961 | 510 | 127 | 3 | 167 | 661 | 19 | 527 | 0.0 | 755 |
| Msa0881030 | AT4G26700.7 | 24.336 | 226 | 153 | 5 | 146 | 366 | 256 | 468 | 2.28e-11 | 67.4 |
Find 162 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTTCAATTTCTTGAAAA+TGG | 0.097004 | 6_1:+27982782 | None:intergenic |
| GCAGATGGGCCTGCAGTTTC+TGG | 0.145741 | 6_1:+27980267 | None:intergenic |
| TGTTTATTTGTAGCCTTATT+TGG | 0.199374 | 6_1:-27981407 | Msa0881030:intron |
| CTTATTAATGTTGCTGTTCC+TGG | 0.208314 | 6_1:-27981658 | Msa0881030:CDS |
| GAAGAAAACTCCTCAACTTT+TGG | 0.232213 | 6_1:-27981183 | Msa0881030:CDS |
| TGAATCTCTGTCGGCATTAA+AGG | 0.238674 | 6_1:-27976949 | Msa0881030:three_prime_UTR |
| GTGCAACAAATGCAAGATTA+AGG | 0.241539 | 6_1:+27980133 | None:intergenic |
| TCTTTCTGTCGGATCACTTA+TGG | 0.263323 | 6_1:+27980239 | None:intergenic |
| TTCCGAAATGGCATCTTTAT+AGG | 0.267092 | 6_1:+27979310 | None:intergenic |
| GAAGCTACAGGTGATGTTTC+TGG | 0.283137 | 6_1:+27977073 | None:intergenic |
| CTGATGCTGATATACTAAAC+TGG | 0.292071 | 6_1:-27978163 | Msa0881030:CDS |
| TAATATTGGTACACAGGATA+TGG | 0.301639 | 6_1:-27981524 | Msa0881030:CDS |
| CTCCATTTCAGATGTTCTTC+CGG | 0.303748 | 6_1:+27978118 | None:intergenic |
| CTCAATTCAGCAAAGGCTAT+TGG | 0.304700 | 6_1:-27981559 | Msa0881030:CDS |
| GTGTTCTTGTTTCTGATCAA+TGG | 0.308745 | 6_1:-27983027 | Msa0881030:CDS |
| GTCCTCAGGTAACAGGAAAA+TGG | 0.310800 | 6_1:+27977405 | None:intergenic |
| ATCAGACCAAGTACCAAATA+AGG | 0.331284 | 6_1:+27981394 | None:intergenic |
| ATTGTTGAAAGTGAGAAAAT+TGG | 0.333157 | 6_1:+27983300 | None:intergenic |
| CTCAATTTCCTTCTCCTTCG+CGG | 0.336250 | 6_1:-27983356 | Msa0881030:five_prime_UTR |
| CAAGTATAAGTTCGATAGTT+GGG | 0.349516 | 6_1:-27976583 | Msa0881030:three_prime_UTR |
| CAGTTCTCCACTTTCCGAAA+TGG | 0.351333 | 6_1:+27979298 | None:intergenic |
| CTCCTATAAAGATGCCATTT+CGG | 0.357411 | 6_1:-27979312 | Msa0881030:CDS |
| TTGTAGCCTTATTTGGTACT+TGG | 0.358094 | 6_1:-27981400 | Msa0881030:intron |
| CGATTATGTCCTCAGGTAAC+AGG | 0.359547 | 6_1:+27977398 | None:intergenic |
| TCAATTCAGCAAAGGCTATT+GGG | 0.370233 | 6_1:-27981558 | Msa0881030:CDS |
| GGAATTAGTGGAAGATGATA+AGG | 0.375109 | 6_1:-27981162 | Msa0881030:intron |
| AAGCAATTAACGTACCTTAT+GGG | 0.377264 | 6_1:+27983210 | None:intergenic |
| ATAAAGTGAGTATCATCTTC+TGG | 0.378823 | 6_1:+27977146 | None:intergenic |
| ATTATCATCAATAGCTAAAT+CGG | 0.379443 | 6_1:+27977009 | None:intergenic |
| CGCACACATTAACAGTTACT+TGG | 0.389361 | 6_1:-27981871 | Msa0881030:CDS |
| GGAAGAGTCGTATCAGAATA+TGG | 0.390337 | 6_1:-27982718 | Msa0881030:CDS |
| ATCAGTGTTGCCAGAAAACT+TGG | 0.390508 | 6_1:-27977433 | Msa0881030:CDS |
| GCCTTCAATTTCTTGAAAAT+GGG | 0.394045 | 6_1:+27982783 | None:intergenic |
| GACCCTTCAACTATGTCCTT+TGG | 0.396033 | 6_1:+27980162 | None:intergenic |
| GGGTGCACAGTGGTTAATAT+TGG | 0.401432 | 6_1:-27981538 | Msa0881030:CDS |
| CTAAAGATGGAGTCCTGCTT+TGG | 0.403603 | 6_1:-27981782 | Msa0881030:intron |
| TTCATCAATCTTAACCCATA+AGG | 0.404315 | 6_1:-27983224 | Msa0881030:intron |
| TGGAGCCAAGGGTGGTCAAC+TGG | 0.404329 | 6_1:-27977657 | Msa0881030:CDS |
| AATGGAGTGCAAGCACGAAT+TGG | 0.405359 | 6_1:+27976641 | None:intergenic |
| GCATTTGTAGACGGATCAAT+TGG | 0.408423 | 6_1:+27981819 | None:intergenic |
| CGCTGATCATTTACCAAAGC+AGG | 0.410747 | 6_1:+27981769 | None:intergenic |
| TTGTTGAAAGTGAGAAAATT+GGG | 0.412898 | 6_1:+27983301 | None:intergenic |
| TCCGACAGAAAGAGCAAATA+TGG | 0.413008 | 6_1:-27980229 | Msa0881030:CDS |
| TTTCACCTGGATCTGTCAAT+TGG | 0.414508 | 6_1:-27979351 | Msa0881030:CDS |
| ACTGGAGTTTAGTTACTAAA+GGG | 0.417956 | 6_1:-27977639 | Msa0881030:CDS |
| ATCAGTAATCTCTTTACCTT+GGG | 0.422621 | 6_1:+27978181 | None:intergenic |
| AAGAAAGATGCTTCAGACTC+TGG | 0.423959 | 6_1:-27979565 | Msa0881030:CDS |
| GGGAATAAGAAGCTCTTACT+AGG | 0.424845 | 6_1:-27979202 | Msa0881030:intron |
| GAAGAACCACAGATAATAGA+AGG | 0.426400 | 6_1:-27976799 | Msa0881030:three_prime_UTR |
| CATTTCAATAAAACCTTGTC+CGG | 0.427856 | 6_1:+27980991 | None:intergenic |
| TCTATTAGAAGTTCTTGATA+AGG | 0.431418 | 6_1:-27979374 | Msa0881030:CDS |
| TGTATCTGAAAGAACTCAAT+CGG | 0.434854 | 6_1:-27982832 | Msa0881030:CDS |
| TTAATTCGACTTGAGTGAAC+TGG | 0.435059 | 6_1:+27982996 | None:intergenic |
| GGATGAGATTAAGGCTGTAT+TGG | 0.438071 | 6_1:-27982739 | Msa0881030:CDS |
| AGCCGGAAGAACATCTGAAA+TGG | 0.438304 | 6_1:-27978120 | Msa0881030:CDS |
| AGATTCACACTGCCAGCTTA+AGG | 0.440565 | 6_1:+27976965 | None:intergenic |
| TCAATTTCCTTCTCCTTCGC+GGG | 0.440596 | 6_1:-27983355 | Msa0881030:five_prime_UTR |
| AACTGGAGTTTAGTTACTAA+AGG | 0.442884 | 6_1:-27977640 | Msa0881030:CDS |
| AGCACGAATTGGAGTAATCT+TGG | 0.443446 | 6_1:+27976652 | None:intergenic |
| TCAAGTATAAGTTCGATAGT+TGG | 0.444798 | 6_1:-27976584 | Msa0881030:three_prime_UTR |
| CATTTACTAAGGAAAAGTTT+AGG | 0.445102 | 6_1:+27979248 | None:intergenic |
| AAAAGTAACCATACCTATGC+TGG | 0.448298 | 6_1:+27980103 | None:intergenic |
| CAAACTCGAGCTGCAGCAAA+AGG | 0.449356 | 6_1:-27981984 | Msa0881030:CDS |
| TGCGCCGAGCACCAAGAGGC+CGG | 0.456344 | 6_1:+27976848 | None:intergenic |
| CATAACCAGCTTTCTTCAAG+TGG | 0.460935 | 6_1:+27980959 | None:intergenic |
| TTGTTTGATCTTGCTAAAGA+TGG | 0.461184 | 6_1:-27981795 | Msa0881030:CDS |
| CATCAGTAATCTCTTTACCT+TGG | 0.462922 | 6_1:+27978180 | None:intergenic |
| AGCGAGCCATTAACACAAAA+CGG | 0.464056 | 6_1:-27981624 | Msa0881030:CDS |
| AGCAAATATGGTTCTTGAGC+AGG | 0.464906 | 6_1:-27980217 | Msa0881030:CDS |
| TTATTCCCAATAATAAGAAA+AGG | 0.464932 | 6_1:-27976707 | Msa0881030:three_prime_UTR |
| TTATTAATGTTGCTGTTCCT+GGG | 0.467543 | 6_1:-27981657 | Msa0881030:CDS |
| TGCTTCCAATTGACAGATCC+AGG | 0.469124 | 6_1:+27979346 | None:intergenic |
| GTTACCAGCAACATTTACTA+AGG | 0.474649 | 6_1:+27979237 | None:intergenic |
| CTGAATTGAGGCCAAGGGTG+TGG | 0.475848 | 6_1:+27981572 | None:intergenic |
| TATTCCCAATAATAAGAAAA+GGG | 0.477067 | 6_1:-27976706 | Msa0881030:three_prime_UTR |
| AATTTCCACTTGAAGAAAGC+TGG | 0.477622 | 6_1:-27980964 | Msa0881030:CDS |
| CATGTTGAAAGTTGAAACTT+TGG | 0.478498 | 6_1:+27983063 | None:intergenic |
| ACCATATTTGCTCTTTCTGT+CGG | 0.484244 | 6_1:+27980228 | None:intergenic |
| AAATTTCTCATCTGATGTAA+AGG | 0.484697 | 6_1:-27980923 | Msa0881030:intron |
| TCACTTATGGTCAAGGCAGA+TGG | 0.486966 | 6_1:+27980252 | None:intergenic |
| ACAAATGCAAGATTAAGGTT+AGG | 0.489655 | 6_1:+27980138 | None:intergenic |
| GAAAGACGAAGCCGGCCTCT+TGG | 0.490893 | 6_1:-27976859 | Msa0881030:three_prime_UTR |
| AAACTCCAGTTGACCACCCT+TGG | 0.493668 | 6_1:+27977652 | None:intergenic |
| AAAGATGCCATTTCGGAAAG+TGG | 0.495109 | 6_1:-27979305 | Msa0881030:CDS |
| CAATCGGGTCGTGTTGTTGT+GGG | 0.495264 | 6_1:-27982816 | Msa0881030:CDS |
| TCGCCATCTGCTGAAGCTAC+AGG | 0.496898 | 6_1:+27977061 | None:intergenic |
| CAATAGCCTTTGCTGAATTG+AGG | 0.498086 | 6_1:+27981560 | None:intergenic |
| TCTGATTTCACAAATAATCA+AGG | 0.499124 | 6_1:-27981377 | Msa0881030:intron |
| TTCAATTTCTTGAAAATGGG+AGG | 0.499738 | 6_1:+27982786 | None:intergenic |
| GCTGGTAACGATATTGTTCA+AGG | 0.500025 | 6_1:-27979223 | Msa0881030:CDS |
| AGACTCTGGATCAACAGTCT+TGG | 0.504040 | 6_1:-27979551 | Msa0881030:CDS |
| TCAATCGGGTCGTGTTGTTG+TGG | 0.506562 | 6_1:-27982817 | Msa0881030:CDS |
| ACTCCAAAGGACATAGTTGA+AGG | 0.507026 | 6_1:-27980165 | Msa0881030:CDS |
| CACTTATGGTCAAGGCAGAT+GGG | 0.511464 | 6_1:+27980253 | None:intergenic |
| ATTAAAGGATGTCTGTCAAA+AGG | 0.512704 | 6_1:-27976934 | Msa0881030:three_prime_UTR |
| ATCTGAAATGGAGAGTTTCA+AGG | 0.513085 | 6_1:-27978108 | Msa0881030:intron |
| TTGAAGCAAACAACAAAATG+AGG | 0.514413 | 6_1:-27976911 | Msa0881030:three_prime_UTR |
| CGAAATGGCATCTTTATAGG+AGG | 0.519018 | 6_1:+27979313 | None:intergenic |
| TTAGTTACTAAAGGGGAGAC+TGG | 0.520211 | 6_1:-27977631 | Msa0881030:intron |
| GCGAGCCATTAACACAAAAC+GGG | 0.525388 | 6_1:-27981623 | Msa0881030:CDS |
| GTTCTTGATAAGGTTTCACC+TGG | 0.533370 | 6_1:-27979364 | Msa0881030:CDS |
| GACAAAATGGCAGGATGTGG+AGG | 0.537970 | 6_1:-27981031 | Msa0881030:intron |
| TCCACTAATTCCAAAAGTTG+AGG | 0.538135 | 6_1:+27981173 | None:intergenic |
| TTTGAGCGCTGTGGAGCCAA+GGG | 0.539077 | 6_1:-27977668 | Msa0881030:CDS |
| CTGATGATGCACAGACATCT+CGG | 0.539124 | 6_1:-27979589 | Msa0881030:CDS |
| CAAGATCCTTCTATTATCTG+TGG | 0.539228 | 6_1:+27976793 | None:intergenic |
| TATCTGCTAGCATCATGTAC+TGG | 0.540376 | 6_1:-27977126 | Msa0881030:CDS |
| GGTACACAGGATATGGTTGA+AGG | 0.543260 | 6_1:-27981517 | Msa0881030:CDS |
| GATAGGACCCGCGAAGGAGA+AGG | 0.543720 | 6_1:+27983348 | None:intergenic |
| CTCAAGGAAGAAAATTCCGT+TGG | 0.548350 | 6_1:+27977693 | None:intergenic |
| TGGATCTGTCAATTGGAAGC+AGG | 0.548732 | 6_1:-27979344 | Msa0881030:CDS |
| CAAAACGGGATCTTAATCCA+TGG | 0.551814 | 6_1:-27981609 | Msa0881030:CDS |
| GAAAGTTGAAACTTTGGTTG+AGG | 0.551877 | 6_1:+27983069 | None:intergenic |
| TGATGATGCACAGACATCTC+GGG | 0.552373 | 6_1:-27979588 | Msa0881030:CDS |
| CTTACCTCGATTATGTCCTC+AGG | 0.553465 | 6_1:+27977391 | None:intergenic |
| TGCAATTAATGAATCTGAGA+AGG | 0.554719 | 6_1:-27981904 | Msa0881030:CDS |
| GCTCTTGCTCCAGAAACTGC+AGG | 0.556106 | 6_1:-27980276 | Msa0881030:CDS |
| AATGCCAACTCTCCTTAAGC+TGG | 0.557503 | 6_1:-27976977 | Msa0881030:exon |
| CAACTATGTCCTTTGGAGTG+AGG | 0.559053 | 6_1:+27980169 | None:intergenic |
| AAGTATAAGTTCGATAGTTG+GGG | 0.561130 | 6_1:-27976582 | None:intergenic |
| GCTCGCTCATCTATTGTCCC+AGG | 0.564121 | 6_1:+27981640 | None:intergenic |
| CCACAGCGCTCAAAAGCTCA+AGG | 0.565969 | 6_1:+27977677 | None:intergenic |
| TGTCGGATCACTTATGGTCA+AGG | 0.567674 | 6_1:+27980245 | None:intergenic |
| GAAGCCGGCCTCTTGGTGCT+CGG | 0.569076 | 6_1:-27976852 | Msa0881030:three_prime_UTR |
| TTCAATAAAACCTTGTCCGG+TGG | 0.569867 | 6_1:+27980994 | None:intergenic |
| TCACCTGTAGCTTCAGCAGA+TGG | 0.571305 | 6_1:-27977064 | Msa0881030:CDS |
| TATCAGTTTACCACCGGACA+AGG | 0.571953 | 6_1:-27981004 | Msa0881030:CDS |
| AATAACAAAGTGAAGAAAGC+CGG | 0.571985 | 6_1:-27978137 | Msa0881030:CDS |
| GAGCGCTGTGGAGCCAAGGG+TGG | 0.578582 | 6_1:-27977665 | Msa0881030:CDS |
| CAATAATAAGAAAAGGGAGG+AGG | 0.578689 | 6_1:-27976700 | Msa0881030:three_prime_UTR |
| CCTTTGCTGAATTGAGGCCA+AGG | 0.582536 | 6_1:+27981566 | None:intergenic |
| ACTGCCAGCTTAAGGAGAGT+TGG | 0.583296 | 6_1:+27976973 | None:intergenic |
| ATCAGTCATCATCTCAGCGA+AGG | 0.585154 | 6_1:+27979607 | None:intergenic |
| CAGGATAAGAATCTTTCCAA+CGG | 0.585427 | 6_1:-27977709 | Msa0881030:CDS |
| AGGAATGAAAACCACACCCT+TGG | 0.586456 | 6_1:-27981583 | Msa0881030:CDS |
| CGAGCTGCAGCAAAAGGTGG+CGG | 0.589232 | 6_1:-27981978 | Msa0881030:CDS |
| TCAAACAATGCATTTGTAGA+CGG | 0.593212 | 6_1:+27981810 | None:intergenic |
| CTGGCAGTGTGAATCTCTGT+CGG | 0.593696 | 6_1:-27976958 | Msa0881030:three_prime_UTR |
| GGAGCTTATCAGTTTACCAC+CGG | 0.595643 | 6_1:-27981010 | Msa0881030:CDS |
| ATAGAATAGAAAGACGAAGC+CGG | 0.597501 | 6_1:-27976867 | Msa0881030:three_prime_UTR |
| GTATCTGAAAGAACTCAATC+GGG | 0.598331 | 6_1:-27982831 | Msa0881030:CDS |
| TGATGCTGATATACTAAACT+GGG | 0.599993 | 6_1:-27978162 | Msa0881030:CDS |
| CTGGTAACGATATTGTTCAA+GGG | 0.602831 | 6_1:-27979222 | Msa0881030:CDS |
| AAAAGAGCTCACCCTAAGGA+AGG | 0.609760 | 6_1:+27982674 | None:intergenic |
| CTTTGCTGAATTGAGGCCAA+GGG | 0.610450 | 6_1:+27981567 | None:intergenic |
| ACTCGAGCTGCAGCAAAAGG+TGG | 0.613169 | 6_1:-27981981 | Msa0881030:CDS |
| CTGGAGTTTAGTTACTAAAG+GGG | 0.614933 | 6_1:-27977638 | Msa0881030:CDS |
| GGGATCTTAATCCATGGGAG+AGG | 0.619723 | 6_1:-27981603 | Msa0881030:CDS |
| AGTGGTTAATATTGGTACAC+AGG | 0.622990 | 6_1:-27981530 | Msa0881030:CDS |
| AAAACGGGATCTTAATCCAT+GGG | 0.623930 | 6_1:-27981608 | Msa0881030:CDS |
| TGAAACAGATTTAGTCAATG+AGG | 0.625097 | 6_1:-27977035 | Msa0881030:CDS |
| TGAAGCAAACAACAAAATGA+GGG | 0.628518 | 6_1:-27976910 | Msa0881030:three_prime_UTR |
| CTCCAAAGGACATAGTTGAA+GGG | 0.634932 | 6_1:-27980164 | Msa0881030:CDS |
| CCTTGGCCTCAATTCAGCAA+AGG | 0.637065 | 6_1:-27981566 | Msa0881030:CDS |
| TGTTGAAAGTGAGAAAATTG+GGG | 0.637993 | 6_1:+27983302 | None:intergenic |
| CAAGAGATACCTCACTCCAA+AGG | 0.644053 | 6_1:-27980178 | Msa0881030:CDS |
| AACTTGAGATCACACTCCCA+AGG | 0.664816 | 6_1:-27978197 | Msa0881030:CDS |
| TCCCAATAATAAGAAAAGGG+AGG | 0.676179 | 6_1:-27976703 | Msa0881030:three_prime_UTR |
| TTTGGTGATAGGACCCGCGA+AGG | 0.678311 | 6_1:+27983342 | None:intergenic |
| TGAAAGTGAGAAAATTGGGG+TGG | 0.678859 | 6_1:+27983305 | None:intergenic |
| GTTACCTGAGGACATAATCG+AGG | 0.704443 | 6_1:-27977395 | Msa0881030:intron |
| AAAGGCTATTGGGTGCACAG+TGG | 0.746180 | 6_1:-27981548 | Msa0881030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATACATTAAGAATATTT+TGG | - | chr6_1:27979911-27979930 | Msa0881030:intron | 10.0% |
| !!! | TTATACATTAAGAATATTTT+GGG | - | chr6_1:27979912-27979931 | Msa0881030:intron | 10.0% |
| !!! | TTAATTTATTTTCTTTTTTC+AGG | - | chr6_1:27982227-27982246 | Msa0881030:intron | 10.0% |
| !! | TTATTTGTAAGTAACTTTAT+AGG | - | chr6_1:27977884-27977903 | Msa0881030:intron | 15.0% |
| !!! | TATACATTAAGAATATTTTG+GGG | - | chr6_1:27979913-27979932 | Msa0881030:intron | 15.0% |
| !! | TAAATAAAATGAACCAATAA+GGG | + | chr6_1:27980192-27980211 | None:intergenic | 15.0% |
| !!! | TTCATTTTATTTACATTTAC+TGG | - | chr6_1:27980199-27980218 | Msa0881030:CDS | 15.0% |
| !!! | TCATTTTATTTACATTTACT+GGG | - | chr6_1:27980200-27980219 | Msa0881030:CDS | 15.0% |
| !!! | TTTTCAGATTTATGATAAAT+CGG | - | chr6_1:27980789-27980808 | Msa0881030:intron | 15.0% |
| !!! | ATTCATAATATAAACTGTTT+TGG | + | chr6_1:27981944-27981963 | None:intergenic | 15.0% |
| !! | AATAAATCTAAAAAATGTGT+TGG | + | chr6_1:27982209-27982228 | None:intergenic | 15.0% |
| !!! | TTAGAATTTTTTTGTACTTT+AGG | - | chr6_1:27983196-27983215 | Msa0881030:intron | 15.0% |
| !!! | TTGTTGATTTTTGTGTAAAA+AGG | + | chr6_1:27976695-27976714 | None:intergenic | 20.0% |
| !! | TTGAATAACAACAAATTGAA+TGG | + | chr6_1:27976796-27976815 | None:intergenic | 20.0% |
| !! | TGTTCATTTGAAAAATAGAA+GGG | - | chr6_1:27977596-27977615 | Msa0881030:intron | 20.0% |
| !!! | CAAAAGTATACTTTCAAATT+AGG | + | chr6_1:27977824-27977843 | None:intergenic | 20.0% |
| !! | AATAGAATTGATCTTATGTT+TGG | + | chr6_1:27978212-27978231 | None:intergenic | 20.0% |
| !! | ATGAATAATAGAAATCAGAA+TGG | + | chr6_1:27978661-27978680 | None:intergenic | 20.0% |
| !! | TTCTGATTTCTATTATTCAT+TGG | - | chr6_1:27978661-27978680 | Msa0881030:intron | 20.0% |
| !! | ATCATGTAAATATATAATGC+TGG | - | chr6_1:27979136-27979155 | Msa0881030:intron | 20.0% |
| !! | TCATGTAAATATATAATGCT+GGG | - | chr6_1:27979137-27979156 | Msa0881030:intron | 20.0% |
| !! | TATATAATATAACATAGCTC+CGG | - | chr6_1:27979198-27979217 | Msa0881030:intron | 20.0% |
| !! | TATACTAAGATATAATGAAC+CGG | + | chr6_1:27980060-27980079 | None:intergenic | 20.0% |
| !! | GTAAATAAAATGAACCAATA+AGG | + | chr6_1:27980193-27980212 | None:intergenic | 20.0% |
| !! | GGTTCAATGAAAAAATTAAA+AGG | + | chr6_1:27980516-27980535 | None:intergenic | 20.0% |
| !!! | TTATTTCTTTTTTCACAGAT+GGG | - | chr6_1:27980557-27980576 | Msa0881030:intron | 20.0% |
| !! | ATGAAATAACAAGAACATAT+CGG | + | chr6_1:27980911-27980930 | None:intergenic | 20.0% |
| !!! | CATTAAATTTTGAAACTGAT+GGG | - | chr6_1:27981380-27981399 | Msa0881030:CDS | 20.0% |
| !!! | AAAGCTTTAGAATAAAGAAA+AGG | - | chr6_1:27982125-27982144 | Msa0881030:intron | 20.0% |
| !! | TGTTATAAAATCAACTTCAA+TGG | - | chr6_1:27982673-27982692 | Msa0881030:intron | 20.0% |
| !! | AATAAAGTATGGTATAATCT+AGG | + | chr6_1:27982728-27982747 | None:intergenic | 20.0% |
| !! | ATTATCATCAATAGCTAAAT+CGG | + | chr6_1:27982949-27982968 | None:intergenic | 20.0% |
| !! | TTATTCCCAATAATAAGAAA+AGG | - | chr6_1:27983248-27983267 | Msa0881030:five_prime_UTR | 20.0% |
| !! | TATTCCCAATAATAAGAAAA+GGG | - | chr6_1:27983249-27983268 | Msa0881030:five_prime_UTR | 20.0% |
| ! | TTGTTGAAAGTGAGAAAATT+GGG | + | chr6_1:27976657-27976676 | None:intergenic | 25.0% |
| ! | ATTGTTGAAAGTGAGAAAAT+TGG | + | chr6_1:27976658-27976677 | None:intergenic | 25.0% |
| ! | AACAAAGAAAAACAACACAT+TGG | + | chr6_1:27976831-27976850 | None:intergenic | 25.0% |
| !!! | AATGTGTTGTTTTTCTTTGT+TGG | - | chr6_1:27976830-27976849 | Msa0881030:three_prime_UTR | 25.0% |
| !!! | ATGTGTTGTTTTTCTTTGTT+GGG | - | chr6_1:27976831-27976850 | Msa0881030:three_prime_UTR | 25.0% |
| ! | CAATGATCAAGAAATCAAAA+TGG | + | chr6_1:27977045-27977064 | None:intergenic | 25.0% |
| ! | TAGAAGAAATAGTACGATAA+TGG | - | chr6_1:27977363-27977382 | Msa0881030:intron | 25.0% |
| !!! | GTCATATGCTATTTTGATTT+AGG | - | chr6_1:27977432-27977451 | Msa0881030:CDS | 25.0% |
| !!! | TCTGTTTCTATATAATAGAG+GGG | + | chr6_1:27977501-27977520 | None:intergenic | 25.0% |
| !!! | CTCTGTTTCTATATAATAGA+GGG | + | chr6_1:27977502-27977521 | None:intergenic | 25.0% |
| ! | CTCTATTATATAGAAACAGA+GGG | - | chr6_1:27977501-27977520 | Msa0881030:intron | 25.0% |
| ! | GTTTCATTTAAGCAAAACTA+AGG | - | chr6_1:27977533-27977552 | Msa0881030:intron | 25.0% |
| !! | ATTTTTCCAACAAATAAGAG+TGG | - | chr6_1:27977569-27977588 | Msa0881030:intron | 25.0% |
| ! | GTGTTCATTTGAAAAATAGA+AGG | - | chr6_1:27977595-27977614 | Msa0881030:intron | 25.0% |
| ! | GTTCATTTGAAAAATAGAAG+GGG | - | chr6_1:27977597-27977616 | Msa0881030:intron | 25.0% |
| !!! | AAGTTCTTCTTCATTTTTGA+AGG | - | chr6_1:27978006-27978025 | Msa0881030:intron | 25.0% |
| ! | TTTAAGTCTGTCAAAATTCA+GGG | + | chr6_1:27978501-27978520 | None:intergenic | 25.0% |
| !!! | TGTTTATTTGTAGCCTTATT+TGG | - | chr6_1:27978548-27978567 | Msa0881030:intron | 25.0% |
| ! | TCTGATTTCACAAATAATCA+AGG | - | chr6_1:27978578-27978597 | Msa0881030:intron | 25.0% |
| ! | ATGAAAAGGAAAGAATATCA+CGG | + | chr6_1:27978863-27978882 | None:intergenic | 25.0% |
| !! | TTTTGTCATAACATATGAAG+AGG | + | chr6_1:27978911-27978930 | None:intergenic | 25.0% |
| ! | CTTCATATGTTATGACAAAA+TGG | - | chr6_1:27978911-27978930 | Msa0881030:intron | 25.0% |
| ! | AAATTTCTCATCTGATGTAA+AGG | - | chr6_1:27979032-27979051 | Msa0881030:intron | 25.0% |
| ! | TTTAGTAAATCAGAACAACA+GGG | + | chr6_1:27979406-27979425 | None:intergenic | 25.0% |
| ! | ATTTAGTAAATCAGAACAAC+AGG | + | chr6_1:27979407-27979426 | None:intergenic | 25.0% |
| !! | ATTGAATACTTTCTTTTTGC+AGG | - | chr6_1:27979627-27979646 | Msa0881030:CDS | 25.0% |
| !!! | TTCCTTTGCCTTTTTTTTAT+TGG | - | chr6_1:27979960-27979979 | Msa0881030:intron | 25.0% |
| !!! | TCCTTTGCCTTTTTTTTATT+GGG | - | chr6_1:27979961-27979980 | Msa0881030:intron | 25.0% |
| !! | ACCTTTTCCCAATAAAAAAA+AGG | + | chr6_1:27979971-27979990 | None:intergenic | 25.0% |
| !!! | GCTCCTCTAATTTTTTTTAT+TGG | - | chr6_1:27979993-27980012 | Msa0881030:intron | 25.0% |
| ! | AGGCCAATAAAAAAAATTAG+AGG | + | chr6_1:27979999-27980018 | None:intergenic | 25.0% |
| ! | TCCAAAAAAAGATACTCAAA+AGG | + | chr6_1:27980019-27980038 | None:intergenic | 25.0% |
| !!! | AGTATCTTTTTTTGGATGAA+GGG | - | chr6_1:27980023-27980042 | Msa0881030:intron | 25.0% |
| !! | TTTCTCTTTAGGAAAAAAAG+AGG | - | chr6_1:27980127-27980146 | Msa0881030:CDS | 25.0% |
| !! | TTATGTCAATAATGTTTTCG+AGG | - | chr6_1:27980436-27980455 | Msa0881030:intron | 25.0% |
| ! | CATCTGTGAAAAAAGAAATA+AGG | + | chr6_1:27980558-27980577 | None:intergenic | 25.0% |
| !!! | CTTATTTCTTTTTTCACAGA+TGG | - | chr6_1:27980556-27980575 | Msa0881030:intron | 25.0% |
| ! | TGCAACCAAGTTATAAAAAT+TGG | - | chr6_1:27980678-27980697 | Msa0881030:intron | 25.0% |
| ! | GCAACCAAGTTATAAAAATT+GGG | - | chr6_1:27980679-27980698 | Msa0881030:intron | 25.0% |
| ! | CATTTACTAAGGAAAAGTTT+AGG | + | chr6_1:27980710-27980729 | None:intergenic | 25.0% |
| ! | TTATGATAAATCGGTATTGT+TGG | - | chr6_1:27980798-27980817 | Msa0881030:intron | 25.0% |
| ! | TATAACTGAAGATAACCAAT+AGG | - | chr6_1:27980884-27980903 | Msa0881030:intron | 25.0% |
| ! | TGAAATAACAAGAACATATC+GGG | + | chr6_1:27980910-27980929 | None:intergenic | 25.0% |
| !!! | TGTTCTTGTTATTTCATACA+AGG | - | chr6_1:27980914-27980933 | Msa0881030:intron | 25.0% |
| !! | TATATTAGACCTTATTTCCA+TGG | - | chr6_1:27980973-27980992 | Msa0881030:CDS | 25.0% |
| ! | CTATAACTAAGAACAAAAAG+AGG | + | chr6_1:27981236-27981255 | None:intergenic | 25.0% |
| ! | GTTAAAAAAACTGTCTTTCT+AGG | - | chr6_1:27981261-27981280 | Msa0881030:intron | 25.0% |
| ! | ATCTATAATGTTACAGAAGA+AGG | + | chr6_1:27981306-27981325 | None:intergenic | 25.0% |
| ! | TTCTTCTGTAACATTATAGA+TGG | - | chr6_1:27981305-27981324 | Msa0881030:intron | 25.0% |
| ! | TCTTCTGTAACATTATAGAT+GGG | - | chr6_1:27981306-27981325 | Msa0881030:intron | 25.0% |
| !!! | GCATTAAATTTTGAAACTGA+TGG | - | chr6_1:27981379-27981398 | Msa0881030:CDS | 25.0% |
| ! | GAAATATTATAACCGAAGAA+TGG | - | chr6_1:27981408-27981427 | Msa0881030:intron | 25.0% |
| ! | TGGTTAAAAACGATGATAAA+GGG | + | chr6_1:27981557-27981576 | None:intergenic | 25.0% |
| ! | ATGGTTAAAAACGATGATAA+AGG | + | chr6_1:27981558-27981577 | None:intergenic | 25.0% |
| ! | AATATAAGTATACTCAGAAC+TGG | + | chr6_1:27981891-27981910 | None:intergenic | 25.0% |
| ! | GTATGCATATTATCTTAAGA+CGG | - | chr6_1:27981916-27981935 | Msa0881030:CDS | 25.0% |
| ! | GCATTTGCATATATCATATT+TGG | - | chr6_1:27981995-27982014 | Msa0881030:CDS | 25.0% |
| ! | ACTGTTCAATGTTTAACAAA+GGG | - | chr6_1:27982148-27982167 | Msa0881030:intron | 25.0% |
| !!! | GCTGAGAAATTTTATTTTTG+TGG | - | chr6_1:27982750-27982769 | Msa0881030:CDS | 25.0% |
| !! | GAAAAAAACGATTTGGTGAT+AGG | + | chr6_1:27976627-27976646 | None:intergenic | 30.0% |
| TGTTGAAAGTGAGAAAATTG+GGG | + | chr6_1:27976656-27976675 | None:intergenic | 30.0% | |
| TTCATCAATCTTAACCCATA+AGG | - | chr6_1:27976731-27976750 | Msa0881030:three_prime_UTR | 30.0% | |
| AAGCAATTAACGTACCTTAT+GGG | + | chr6_1:27976748-27976767 | None:intergenic | 30.0% | |
| CATGTTGAAAGTTGAAACTT+TGG | + | chr6_1:27976895-27976914 | None:intergenic | 30.0% | |
| !!! | TTTCAACATGTCTAGTTTTG+TGG | - | chr6_1:27976905-27976924 | Msa0881030:three_prime_UTR | 30.0% |
| !!! | TTCAACATGTCTAGTTTTGT+GGG | - | chr6_1:27976906-27976925 | Msa0881030:three_prime_UTR | 30.0% |
| TGATTTCTTGATCATTGATG+AGG | - | chr6_1:27977048-27977067 | Msa0881030:CDS | 30.0% | |
| TGTATCTGAAAGAACTCAAT+CGG | - | chr6_1:27977123-27977142 | Msa0881030:CDS | 30.0% | |
| TTCAATTTCTTGAAAATGGG+AGG | + | chr6_1:27977172-27977191 | None:intergenic | 30.0% | |
| !! | TCCCATTTTCAAGAAATTGA+AGG | - | chr6_1:27977171-27977190 | Msa0881030:intron | 30.0% |
| GCCTTCAATTTCTTGAAAAT+GGG | + | chr6_1:27977175-27977194 | None:intergenic | 30.0% | |
| AGCCTTCAATTTCTTGAAAA+TGG | + | chr6_1:27977176-27977195 | None:intergenic | 30.0% | |
| ! | TTTTACTGAGGATGAGATTA+AGG | - | chr6_1:27977207-27977226 | Msa0881030:intron | 30.0% |
| !! | CCTCTGTTTCTATATAATAG+AGG | + | chr6_1:27977503-27977522 | None:intergenic | 30.0% |
| CCTCTATTATATAGAAACAG+AGG | - | chr6_1:27977500-27977519 | Msa0881030:intron | 30.0% | |
| ATTTAAGCAAAACTAAGGTG+AGG | - | chr6_1:27977538-27977557 | Msa0881030:intron | 30.0% | |
| TTTAAGCAAAACTAAGGTGA+GGG | - | chr6_1:27977539-27977558 | Msa0881030:intron | 30.0% | |
| !! | TTTTGATTCAAATGTCTGTG+TGG | - | chr6_1:27977846-27977865 | Msa0881030:intron | 30.0% |
| TTTGATTCAAATGTCTGTGT+GGG | - | chr6_1:27977847-27977866 | Msa0881030:intron | 30.0% | |
| ATGTCAATAAATAAGCTACC+AGG | + | chr6_1:27977926-27977945 | None:intergenic | 30.0% | |
| GCTTATTTATTGACATTGAG+TGG | - | chr6_1:27977930-27977949 | Msa0881030:intron | 30.0% | |
| ATTTATTGACATTGAGTGGT+AGG | - | chr6_1:27977934-27977953 | Msa0881030:intron | 30.0% | |
| TGCAATTAATGAATCTGAGA+AGG | - | chr6_1:27978051-27978070 | Msa0881030:intron | 30.0% | |
| TCAAACAATGCATTTGTAGA+CGG | + | chr6_1:27978148-27978167 | None:intergenic | 30.0% | |
| TTGTTTGATCTTGCTAAAGA+TGG | - | chr6_1:27978160-27978179 | Msa0881030:CDS | 30.0% | |
| ! | TTATTAATGTTGCTGTTCCT+GGG | - | chr6_1:27978298-27978317 | Msa0881030:intron | 30.0% |
| TAATATTGGTACACAGGATA+TGG | - | chr6_1:27978431-27978450 | Msa0881030:intron | 30.0% | |
| TTAAGTCTGTCAAAATTCAG+GGG | + | chr6_1:27978500-27978519 | None:intergenic | 30.0% | |
| GTTTAAGTCTGTCAAAATTC+AGG | + | chr6_1:27978502-27978521 | None:intergenic | 30.0% | |
| TCATCTTATGCAAGTGAAAA+TGG | + | chr6_1:27978621-27978640 | None:intergenic | 30.0% | |
| ! | ATTTTCACTTGCATAAGATG+AGG | - | chr6_1:27978620-27978639 | Msa0881030:intron | 30.0% |
| ! | TTTTCACTTGCATAAGATGA+GGG | - | chr6_1:27978621-27978640 | Msa0881030:intron | 30.0% |
| TGGAAAGACTTCTTAACTTA+TGG | - | chr6_1:27978681-27978700 | Msa0881030:intron | 30.0% | |
| ! | TTGTCTGTCTTTTCATTCTT+TGG | - | chr6_1:27978714-27978733 | Msa0881030:intron | 30.0% |
| ATATGTTATGACAAAATGGC+AGG | - | chr6_1:27978915-27978934 | Msa0881030:intron | 30.0% | |
| CATTTCAATAAAACCTTGTC+CGG | + | chr6_1:27978967-27978986 | None:intergenic | 30.0% | |
| TGAACTGTAGAATGAAATTG+AGG | - | chr6_1:27979335-27979354 | Msa0881030:CDS | 30.0% | |
| TTAGTAAATCAGAACAACAG+GGG | + | chr6_1:27979405-27979424 | None:intergenic | 30.0% | |
| AGATGTAAACAGATACAACA+TGG | - | chr6_1:27979577-27979596 | Msa0881030:CDS | 30.0% | |
| ! | AATACTTTCTTTTTGCAGGA+TGG | - | chr6_1:27979631-27979650 | Msa0881030:CDS | 30.0% |
| ACAAATGCAAGATTAAGGTT+AGG | + | chr6_1:27979820-27979839 | None:intergenic | 30.0% | |
| TCCCAATAAAAAAAAGGCAA+AGG | + | chr6_1:27979965-27979984 | None:intergenic | 30.0% | |
| !!! | GCCTTTTTTTTATTGGGAAA+AGG | - | chr6_1:27979967-27979986 | Msa0881030:intron | 30.0% |
| !! | GCCTTTTGAGTATCTTTTTT+TGG | - | chr6_1:27980015-27980034 | Msa0881030:intron | 30.0% |
| !!! | GAGTATCTTTTTTTGGATGA+AGG | - | chr6_1:27980022-27980041 | Msa0881030:intron | 30.0% |
| TAGACTAGAACTTTCTCTTT+AGG | - | chr6_1:27980116-27980135 | Msa0881030:intron | 30.0% | |
| ! | TCTTTAGGAAAAAAAGAGGA+CGG | - | chr6_1:27980131-27980150 | Msa0881030:CDS | 30.0% |
| ATGGCATACATATCACATAA+TGG | - | chr6_1:27980162-27980181 | Msa0881030:CDS | 30.0% | |
| TGGCATACATATCACATAAT+GGG | - | chr6_1:27980163-27980182 | Msa0881030:CDS | 30.0% | |
| TAGAGTTAGGAAATGTATAG+AGG | - | chr6_1:27980250-27980269 | Msa0881030:CDS | 30.0% | |
| ! | AAATTAAAAGGCAGAAGTAC+AGG | + | chr6_1:27980504-27980523 | None:intergenic | 30.0% |
| ! | TTTTTCATTGAACCAACTAC+TGG | - | chr6_1:27980522-27980541 | Msa0881030:intron | 30.0% |
| ! | CCTTCCCAATTTTTATAACT+TGG | + | chr6_1:27980686-27980705 | None:intergenic | 30.0% |
| CCAAGTTATAAAAATTGGGA+AGG | - | chr6_1:27980683-27980702 | Msa0881030:intron | 30.0% | |
| ! | TTTTCCTTAGTAAATGTTGC+TGG | - | chr6_1:27980714-27980733 | Msa0881030:intron | 30.0% |
| ! | ATAAAATTGCAGTTTCGAGT+TGG | + | chr6_1:27981122-27981141 | None:intergenic | 30.0% |
| ATGAGAAGTTACTGAAAAGT+AGG | - | chr6_1:27981155-27981174 | Msa0881030:intron | 30.0% | |
| ACTAAGAACAAAAAGAGGAA+AGG | + | chr6_1:27981231-27981250 | None:intergenic | 30.0% | |
| ATCAGTAATCTCTTTACCTT+GGG | + | chr6_1:27981777-27981796 | None:intergenic | 30.0% | |
| TGATGCTGATATACTAAACT+GGG | - | chr6_1:27981793-27981812 | Msa0881030:CDS | 30.0% | |
| AATAACAAAGTGAAGAAAGC+CGG | - | chr6_1:27981818-27981837 | Msa0881030:CDS | 30.0% | |
| GACTGTTCAATGTTTAACAA+AGG | - | chr6_1:27982147-27982166 | Msa0881030:intron | 30.0% | |
| CTGTTCAATGTTTAACAAAG+GGG | - | chr6_1:27982149-27982168 | Msa0881030:intron | 30.0% | |
| AACTGGAGTTTAGTTACTAA+AGG | - | chr6_1:27982315-27982334 | Msa0881030:intron | 30.0% | |
| ACTGGAGTTTAGTTACTAAA+GGG | - | chr6_1:27982316-27982335 | Msa0881030:intron | 30.0% | |
| ! | AGTTAGCTTCAATTTCTTGA+AGG | + | chr6_1:27982368-27982387 | None:intergenic | 30.0% |
| TCCATGAAAAATCAACTTCA+TGG | - | chr6_1:27982631-27982650 | Msa0881030:intron | 30.0% | |
| !! | ACCATGAAGTTGATTTTTCA+TGG | + | chr6_1:27982635-27982654 | None:intergenic | 30.0% |
| !!! | CTTCATGGTTTTGTTAAGTT+TGG | - | chr6_1:27982646-27982665 | Msa0881030:intron | 30.0% |
| ! | ATTTTGCATTTAACCTTGAC+AGG | - | chr6_1:27982782-27982801 | Msa0881030:CDS | 30.0% |
| ATAAAGTGAGTATCATCTTC+TGG | + | chr6_1:27982812-27982831 | None:intergenic | 30.0% | |
| TGAAACAGATTTAGTCAATG+AGG | - | chr6_1:27982920-27982939 | Msa0881030:intron | 30.0% | |
| ATTAAAGGATGTCTGTCAAA+AGG | - | chr6_1:27983021-27983040 | Msa0881030:CDS | 30.0% | |
| TTGAAGCAAACAACAAAATG+AGG | - | chr6_1:27983044-27983063 | Msa0881030:CDS | 30.0% | |
| TGAAGCAAACAACAAAATGA+GGG | - | chr6_1:27983045-27983064 | Msa0881030:CDS | 30.0% | |
| ! | TCCTCCCTTTTCTTATTATT+GGG | + | chr6_1:27983256-27983275 | None:intergenic | 30.0% |
| ! | AGAAAAACCACACTCTAAAA+TGG | + | chr6_1:27983335-27983354 | None:intergenic | 30.0% |
| TCAAGTATAAGTTCGATAGT+TGG | - | chr6_1:27983371-27983390 | Msa0881030:five_prime_UTR | 30.0% | |
| GTGGAGAGAAAAAAACGATT+TGG | + | chr6_1:27976634-27976653 | None:intergenic | 35.0% | |
| GAAGCAATTAACGTACCTTA+TGG | + | chr6_1:27976749-27976768 | None:intergenic | 35.0% | |
| GAAAGTTGAAACTTTGGTTG+AGG | + | chr6_1:27976889-27976908 | None:intergenic | 35.0% | |
| !! | GTGTTCTTGTTTCTGATCAA+TGG | - | chr6_1:27976928-27976947 | Msa0881030:three_prime_UTR | 35.0% |
| ! | TTAATTCGACTTGAGTGAAC+TGG | + | chr6_1:27976962-27976981 | None:intergenic | 35.0% |
| GTATCTGAAAGAACTCAATC+GGG | - | chr6_1:27977124-27977143 | Msa0881030:CDS | 35.0% | |
| ! | CAAGAAATTGAAGGCTTTTG+CGG | - | chr6_1:27977180-27977199 | Msa0881030:intron | 35.0% |
| ! | TTTTGCGGAGTTTTTTACTG+AGG | - | chr6_1:27977195-27977214 | Msa0881030:intron | 35.0% |
| !! | TTGATTTTGAGTCCTTCCTT+AGG | - | chr6_1:27977269-27977288 | Msa0881030:intron | 35.0% |
| !! | TGATTTTGAGTCCTTCCTTA+GGG | - | chr6_1:27977270-27977289 | Msa0881030:intron | 35.0% |
| ! | AAAAGCGCGTAAACGAAAAA+GGG | + | chr6_1:27977321-27977340 | None:intergenic | 35.0% |
| ! | AAAAAGCGCGTAAACGAAAA+AGG | + | chr6_1:27977322-27977341 | None:intergenic | 35.0% |
| TGTCATCTAAGCATACATCA+GGG | + | chr6_1:27977406-27977425 | None:intergenic | 35.0% | |
| TATATAATAGAGGGGAGATG+CGG | + | chr6_1:27977493-27977512 | None:intergenic | 35.0% | |
| TTAAGCAAAACTAAGGTGAG+GGG | - | chr6_1:27977540-27977559 | Msa0881030:intron | 35.0% | |
| ! | CACTAACCACTCTTATTTGT+TGG | + | chr6_1:27977578-27977597 | None:intergenic | 35.0% |
| TTTGAAAAATAGAAGGGGTG+TGG | - | chr6_1:27977602-27977621 | Msa0881030:intron | 35.0% | |
| ! | TTGAAAAATAGAAGGGGTGT+GGG | - | chr6_1:27977603-27977622 | Msa0881030:intron | 35.0% |
| ATTTGCACTTATCTACTACG+AGG | + | chr6_1:27977644-27977663 | None:intergenic | 35.0% | |
| GGTATTATCTATACTGAACC+TGG | - | chr6_1:27977905-27977924 | Msa0881030:intron | 35.0% | |
| ! | CTTATTAATGTTGCTGTTCC+TGG | - | chr6_1:27978297-27978316 | Msa0881030:intron | 35.0% |
| ! | AAGATCCCGTTTTGTGTTAA+TGG | + | chr6_1:27978340-27978359 | None:intergenic | 35.0% |
| AAAACGGGATCTTAATCCAT+GGG | - | chr6_1:27978347-27978366 | Msa0881030:intron | 35.0% | |
| TCAATTCAGCAAAGGCTATT+GGG | - | chr6_1:27978397-27978416 | Msa0881030:intron | 35.0% | |
| AGTGGTTAATATTGGTACAC+AGG | - | chr6_1:27978425-27978444 | Msa0881030:intron | 35.0% | |
| !! | TTGTAGCCTTATTTGGTACT+TGG | - | chr6_1:27978555-27978574 | Msa0881030:intron | 35.0% |
| ATCAGACCAAGTACCAAATA+AGG | + | chr6_1:27978564-27978583 | None:intergenic | 35.0% | |
| TATGCAAGTGAAAATGGAGT+AGG | + | chr6_1:27978615-27978634 | None:intergenic | 35.0% | |
| ! | GAAGAAAACTCCTCAACTTT+TGG | - | chr6_1:27978772-27978791 | Msa0881030:intron | 35.0% |
| !!! | TCCTCAACTTTTGGAATTAG+TGG | - | chr6_1:27978781-27978800 | Msa0881030:intron | 35.0% |
| TCCACTAATTCCAAAAGTTG+AGG | + | chr6_1:27978785-27978804 | None:intergenic | 35.0% | |
| GGAATTAGTGGAAGATGATA+AGG | - | chr6_1:27978793-27978812 | Msa0881030:intron | 35.0% | |
| GGAAGATGATAAGGTGATAT+TGG | - | chr6_1:27978802-27978821 | Msa0881030:intron | 35.0% | |
| !!! | CGGACAAGGTTTTATTGAAA+TGG | - | chr6_1:27978965-27978984 | Msa0881030:intron | 35.0% |
| AATTTCCACTTGAAGAAAGC+TGG | - | chr6_1:27978991-27979010 | Msa0881030:intron | 35.0% | |
| TTTGTGTATTCTACACACAC+CGG | + | chr6_1:27979220-27979239 | None:intergenic | 35.0% | |
| CATGTTAAGAAAGCAAGTGA+TGG | + | chr6_1:27979245-27979264 | None:intergenic | 35.0% | |
| CATCACTTGCTTTCTTAACA+TGG | - | chr6_1:27979243-27979262 | Msa0881030:CDS | 35.0% | |
| ! | TCTAAGACTCATAGTACTTC+AGG | - | chr6_1:27979292-27979311 | Msa0881030:CDS | 35.0% |
| ACTCATAGTACTTCAGGATT+TGG | - | chr6_1:27979298-27979317 | Msa0881030:CDS | 35.0% | |
| ACTGTAGAATGAAATTGAGG+AGG | - | chr6_1:27979338-27979357 | Msa0881030:CDS | 35.0% | |
| CTAAATCAGTGAAGAAACTG+TGG | - | chr6_1:27979421-27979440 | Msa0881030:intron | 35.0% | |
| AGGACAGCAGAAGATAAAAA+GGG | + | chr6_1:27979447-27979466 | None:intergenic | 35.0% | |
| AAGGACAGCAGAAGATAAAA+AGG | + | chr6_1:27979448-27979467 | None:intergenic | 35.0% | |
| AAAACTACTGAACACTGTCA+AGG | + | chr6_1:27979467-27979486 | None:intergenic | 35.0% | |
| TTCAGTAATCAGCATGTTAC+AGG | + | chr6_1:27979516-27979535 | None:intergenic | 35.0% | |
| CTGATTACTGAATCATTGTG+TGG | - | chr6_1:27979524-27979543 | Msa0881030:CDS | 35.0% | |
| ACCATATTTGCTCTTTCTGT+CGG | + | chr6_1:27979730-27979749 | None:intergenic | 35.0% | |
| GTGCAACAAATGCAAGATTA+AGG | + | chr6_1:27979825-27979844 | None:intergenic | 35.0% | |
| ! | TTGCACAAATTTTCCAGCAT+AGG | - | chr6_1:27979839-27979858 | Msa0881030:intron | 35.0% |
| ! | CAAATTTTCCAGCATAGGTA+TGG | - | chr6_1:27979844-27979863 | Msa0881030:intron | 35.0% |
| AAAAGTAACCATACCTATGC+TGG | + | chr6_1:27979855-27979874 | None:intergenic | 35.0% | |
| !!! | GCATAGGTATGGTTACTTTT+AGG | - | chr6_1:27979855-27979874 | Msa0881030:intron | 35.0% |
| !!! | TAGGTATGGTTACTTTTAGG+AGG | - | chr6_1:27979858-27979877 | Msa0881030:intron | 35.0% |
| ! | AAGAGAAAGTTCTAGTCTAG+TGG | + | chr6_1:27980115-27980134 | None:intergenic | 35.0% |
| ! | CTTTAGGAAAAAAAGAGGAC+GGG | - | chr6_1:27980132-27980151 | Msa0881030:CDS | 35.0% |
| TTTAGGAAAAAAAGAGGACG+GGG | - | chr6_1:27980133-27980152 | Msa0881030:CDS | 35.0% | |
| TTTACTGGGAACAAGTATCT+AGG | - | chr6_1:27980214-27980233 | Msa0881030:CDS | 35.0% | |
| AGTAGTGCAGTTATAGAGTT+AGG | - | chr6_1:27980237-27980256 | Msa0881030:CDS | 35.0% | |
| GTTAGGAAATGTATAGAGGA+CGG | - | chr6_1:27980254-27980273 | Msa0881030:CDS | 35.0% | |
| ATTGTGGCTTTCATTTCTGT+AGG | - | chr6_1:27980294-27980313 | Msa0881030:CDS | 35.0% | |
| GCTTTCATTTCTGTAGGAAT+GGG | - | chr6_1:27980300-27980319 | Msa0881030:CDS | 35.0% | |
| !! | TTTTCGAGGATGTCAGAAAT+GGG | - | chr6_1:27980450-27980469 | Msa0881030:intron | 35.0% |
| ! | ATTGAACCAACTACTGGTTA+TGG | - | chr6_1:27980528-27980547 | Msa0881030:intron | 35.0% |
| ! | CTCCTATAAAGATGCCATTT+CGG | - | chr6_1:27980643-27980662 | Msa0881030:intron | 35.0% |
| TTCCGAAATGGCATCTTTAT+AGG | + | chr6_1:27980648-27980667 | None:intergenic | 35.0% | |
| GTTACCAGCAACATTTACTA+AGG | + | chr6_1:27980721-27980740 | None:intergenic | 35.0% | |
| ! | CTGGTAACGATATTGTTCAA+GGG | - | chr6_1:27980733-27980752 | Msa0881030:intron | 35.0% |
| TAGGCTCTTAATCCATTCTT+CGG | + | chr6_1:27981423-27981442 | None:intergenic | 35.0% | |
| TCAGATCTTACCTCTCAAAT+AGG | + | chr6_1:27981442-27981461 | None:intergenic | 35.0% | |
| ATCTGATTTACTCACAGACT+AGG | - | chr6_1:27981456-27981475 | Msa0881030:intron | 35.0% | |
| ! | TTTACTCACAGACTAGGTTT+TGG | - | chr6_1:27981462-27981481 | Msa0881030:intron | 35.0% |
| ! | TGAGTTTTTGTGAAGCCTTA+AGG | + | chr6_1:27981499-27981518 | None:intergenic | 35.0% |
| ! | ATAAAGGGAGAGAAAGGTAT+AGG | + | chr6_1:27981542-27981561 | None:intergenic | 35.0% |
| !!! | TTTGTCCAACAGCTTTTTTG+TGG | - | chr6_1:27981699-27981718 | Msa0881030:intron | 35.0% |
| !! | GTTTTTCAGAAGTTGAAGCA+TGG | + | chr6_1:27981741-27981760 | None:intergenic | 35.0% |
| CATCAGTAATCTCTTTACCT+TGG | + | chr6_1:27981778-27981797 | None:intergenic | 35.0% | |
| CTGATGCTGATATACTAAAC+TGG | - | chr6_1:27981792-27981811 | Msa0881030:CDS | 35.0% | |
| ! | ATCTGAAATGGAGAGTTTCA+AGG | - | chr6_1:27981847-27981866 | Msa0881030:CDS | 35.0% |
| CAGGATAAGAATCTTTCCAA+CGG | - | chr6_1:27982246-27982265 | Msa0881030:intron | 35.0% | |
| CTGGAGTTTAGTTACTAAAG+GGG | - | chr6_1:27982317-27982336 | Msa0881030:intron | 35.0% | |
| ! | AATGGAACATCCAAGTTTTC+TGG | + | chr6_1:27982535-27982554 | None:intergenic | 35.0% |
| TTTCTCAGCGCAATAAAGTA+TGG | + | chr6_1:27982739-27982758 | None:intergenic | 35.0% | |
| ! | TGTTTTCTTCAGAATTCAGC+AGG | + | chr6_1:27982857-27982876 | None:intergenic | 35.0% |
| ATAGAATAGAAAGACGAAGC+CGG | - | chr6_1:27983088-27983107 | Msa0881030:five_prime_UTR | 35.0% | |
| GAAGAACCACAGATAATAGA+AGG | - | chr6_1:27983156-27983175 | Msa0881030:intron | 35.0% | |
| CAAGATCCTTCTATTATCTG+TGG | + | chr6_1:27983165-27983184 | None:intergenic | 35.0% | |
| TCCCAATAATAAGAAAAGGG+AGG | - | chr6_1:27983252-27983271 | Msa0881030:five_prime_UTR | 35.0% | |
| ! | CTCCTCCCTTTTCTTATTAT+TGG | + | chr6_1:27983257-27983276 | None:intergenic | 35.0% |
| CAATAATAAGAAAAGGGAGG+AGG | - | chr6_1:27983255-27983274 | Msa0881030:five_prime_UTR | 35.0% | |
| ! | GAGTGTGGTTTTTCTATTTC+AGG | - | chr6_1:27983340-27983359 | Msa0881030:five_prime_UTR | 35.0% |
| !! | TGGTTTTTCTATTTCAGGTC+TGG | - | chr6_1:27983345-27983364 | Msa0881030:five_prime_UTR | 35.0% |
| TGAAAGTGAGAAAATTGGGG+TGG | + | chr6_1:27976653-27976672 | None:intergenic | 40.0% | |
| GGATGAGATTAAGGCTGTAT+TGG | - | chr6_1:27977216-27977235 | Msa0881030:intron | 40.0% | |
| GGAAGAGTCGTATCAGAATA+TGG | - | chr6_1:27977237-27977256 | Msa0881030:intron | 40.0% | |
| GTGTCATCTAAGCATACATC+AGG | + | chr6_1:27977407-27977426 | None:intergenic | 40.0% | |
| GACATTCTTGTATGTTCTCG+TGG | + | chr6_1:27977668-27977687 | None:intergenic | 40.0% | |
| CGCACACATTAACAGTTACT+TGG | - | chr6_1:27978084-27978103 | Msa0881030:intron | 40.0% | |
| GCATTTGTAGACGGATCAAT+TGG | + | chr6_1:27978139-27978158 | None:intergenic | 40.0% | |
| AGCGAGCCATTAACACAAAA+CGG | - | chr6_1:27978331-27978350 | Msa0881030:intron | 40.0% | |
| CAAAACGGGATCTTAATCCA+TGG | - | chr6_1:27978346-27978365 | Msa0881030:intron | 40.0% | |
| CAATAGCCTTTGCTGAATTG+AGG | + | chr6_1:27978398-27978417 | None:intergenic | 40.0% | |
| CTCAATTCAGCAAAGGCTAT+TGG | - | chr6_1:27978396-27978415 | Msa0881030:intron | 40.0% | |
| ! | CGCAGTTCTGACAAATGAAA+AGG | + | chr6_1:27978877-27978896 | None:intergenic | 40.0% |
| TATGACAAAATGGCAGGATG+TGG | - | chr6_1:27978921-27978940 | Msa0881030:intron | 40.0% | |
| TTCAATAAAACCTTGTCCGG+TGG | + | chr6_1:27978964-27978983 | None:intergenic | 40.0% | |
| CATAACCAGCTTTCTTCAAG+TGG | + | chr6_1:27978999-27979018 | None:intergenic | 40.0% | |
| TCTCATCTGATGTAAAGGTG+AGG | - | chr6_1:27979037-27979056 | Msa0881030:intron | 40.0% | |
| CTCATCTGATGTAAAGGTGA+GGG | - | chr6_1:27979038-27979057 | Msa0881030:intron | 40.0% | |
| TATCGAACGTATGCTATGTG+AGG | + | chr6_1:27979558-27979577 | None:intergenic | 40.0% | |
| !! | CAACATGGTTCTAAATTGCG+CGG | - | chr6_1:27979592-27979611 | Msa0881030:CDS | 40.0% |
| !! | AACATGGTTCTAAATTGCGC+GGG | - | chr6_1:27979593-27979612 | Msa0881030:CDS | 40.0% |
| ! | TTTCTTTTTGCAGGATGGAG+AGG | - | chr6_1:27979636-27979655 | Msa0881030:CDS | 40.0% |
| TCTTTCTGTCGGATCACTTA+TGG | + | chr6_1:27979719-27979738 | None:intergenic | 40.0% | |
| TCCGACAGAAAGAGCAAATA+TGG | - | chr6_1:27979726-27979745 | Msa0881030:intron | 40.0% | |
| AGCAAATATGGTTCTTGAGC+AGG | - | chr6_1:27979738-27979757 | Msa0881030:intron | 40.0% | |
| ACTCCAAAGGACATAGTTGA+AGG | - | chr6_1:27979790-27979809 | Msa0881030:intron | 40.0% | |
| CTCCAAAGGACATAGTTGAA+GGG | - | chr6_1:27979791-27979810 | Msa0881030:intron | 40.0% | |
| AAGGAAAAGTAGCAGGTTCT+TGG | + | chr6_1:27979946-27979965 | None:intergenic | 40.0% | |
| AAAGGCAAAGGAAAAGTAGC+AGG | + | chr6_1:27979953-27979972 | None:intergenic | 40.0% | |
| ATGAAGGGCTTCTTAGTATC+CGG | - | chr6_1:27980038-27980057 | Msa0881030:intron | 40.0% | |
| !! | ACATAATGGGTCACCCTTAT+TGG | - | chr6_1:27980176-27980195 | Msa0881030:CDS | 40.0% |
| TCTATAGCTGATGGAGATTG+TGG | - | chr6_1:27980278-27980297 | Msa0881030:CDS | 40.0% | |
| GGCTTTCATTTCTGTAGGAA+TGG | - | chr6_1:27980299-27980318 | Msa0881030:CDS | 40.0% | |
| AAGAAAGATGCTTCAGACTC+TGG | - | chr6_1:27980390-27980409 | Msa0881030:intron | 40.0% | |
| !! | GTTTTCGAGGATGTCAGAAA+TGG | - | chr6_1:27980449-27980468 | Msa0881030:intron | 40.0% |
| AGGACAAATGTGAACAGGAA+AGG | + | chr6_1:27980484-27980503 | None:intergenic | 40.0% | |
| AGTACAGGACAAATGTGAAC+AGG | + | chr6_1:27980489-27980508 | None:intergenic | 40.0% | |
| GGAAATCCATAACCAGTAGT+TGG | + | chr6_1:27980537-27980556 | None:intergenic | 40.0% | |
| GTTCTTGATAAGGTTTCACC+TGG | - | chr6_1:27980591-27980610 | Msa0881030:intron | 40.0% | |
| TTTCACCTGGATCTGTCAAT+TGG | - | chr6_1:27980604-27980623 | Msa0881030:intron | 40.0% | |
| CGAAATGGCATCTTTATAGG+AGG | + | chr6_1:27980645-27980664 | None:intergenic | 40.0% | |
| ! | AAAGATGCCATTTCGGAAAG+TGG | - | chr6_1:27980650-27980669 | Msa0881030:intron | 40.0% |
| ! | GCTGGTAACGATATTGTTCA+AGG | - | chr6_1:27980732-27980751 | Msa0881030:intron | 40.0% |
| GGGAATAAGAAGCTCTTACT+AGG | - | chr6_1:27980753-27980772 | Msa0881030:intron | 40.0% | |
| CAAAGCACACGCAAACATAT+CGG | + | chr6_1:27980829-27980848 | None:intergenic | 40.0% | |
| CTACACTCACCATGGAAATA+AGG | + | chr6_1:27980985-27981004 | None:intergenic | 40.0% | |
| TTCTACATCTACACTCACCA+TGG | + | chr6_1:27980993-27981012 | None:intergenic | 40.0% | |
| TTTCAAATCGAAACACCGCA+TGG | - | chr6_1:27981093-27981112 | Msa0881030:intron | 40.0% | |
| AGGAACTGTGTGTCTGTATT+AGG | - | chr6_1:27981175-27981194 | Msa0881030:CDS | 40.0% | |
| TGTGACGAAGTTCTGTTGAT+TGG | - | chr6_1:27981333-27981352 | Msa0881030:intron | 40.0% | |
| GGATTAAGAGCCTATTTGAG+AGG | - | chr6_1:27981429-27981448 | Msa0881030:intron | 40.0% | |
| ! | TTTTGTGAAGCCTTAAGGCA+GGG | + | chr6_1:27981494-27981513 | None:intergenic | 40.0% |
| ! | TTTTTGTGAAGCCTTAAGGC+AGG | + | chr6_1:27981495-27981514 | None:intergenic | 40.0% |
| ! | GGAGAGAAAGGTATAGGATA+GGG | + | chr6_1:27981536-27981555 | None:intergenic | 40.0% |
| ACGATGATAAAGGGAGAGAA+AGG | + | chr6_1:27981548-27981567 | None:intergenic | 40.0% | |
| TAGATAACGCATGGGAAACA+GGG | + | chr6_1:27981645-27981664 | None:intergenic | 40.0% | |
| TCCTATGCTAGATAACGCAT+GGG | + | chr6_1:27981653-27981672 | None:intergenic | 40.0% | |
| CTCCATTTCAGATGTTCTTC+CGG | + | chr6_1:27981840-27981859 | None:intergenic | 40.0% | |
| CTCAAGGAAGAAAATTCCGT+TGG | + | chr6_1:27982265-27982284 | None:intergenic | 40.0% | |
| TTAGTTACTAAAGGGGAGAC+TGG | - | chr6_1:27982324-27982343 | Msa0881030:intron | 40.0% | |
| GCTTCAATTTCTTGAAGGTG+TGG | + | chr6_1:27982363-27982382 | None:intergenic | 40.0% | |
| ATCAGTGTTGCCAGAAAACT+TGG | - | chr6_1:27982522-27982541 | Msa0881030:intron | 40.0% | |
| ! | TTCCATTTTCCTGTTACCTG+AGG | - | chr6_1:27982548-27982567 | Msa0881030:intron | 40.0% |
| TATCTGCTAGCATCATGTAC+TGG | - | chr6_1:27982829-27982848 | Msa0881030:CDS | 40.0% | |
| TGAATCTCTGTCGGCATTAA+AGG | - | chr6_1:27983006-27983025 | Msa0881030:CDS | 40.0% | |
| AGCACGAATTGGAGTAATCT+TGG | + | chr6_1:27983306-27983325 | None:intergenic | 40.0% | |
| !!! | TTGCACTCCATTTTAGAGTG+TGG | - | chr6_1:27983325-27983344 | Msa0881030:five_prime_UTR | 40.0% |
| CTCAATTTCCTTCTCCTTCG+CGG | - | chr6_1:27976599-27976618 | Msa0881030:three_prime_UTR | 45.0% | |
| TCAATTTCCTTCTCCTTCGC+GGG | - | chr6_1:27976600-27976619 | Msa0881030:three_prime_UTR | 45.0% | |
| AAAAGAGCTCACCCTAAGGA+AGG | + | chr6_1:27977284-27977303 | None:intergenic | 45.0% | |
| CGAAAAAAGAGCTCACCCTA+AGG | + | chr6_1:27977288-27977307 | None:intergenic | 45.0% | |
| !!! | AAGGGGTGTGGGTGTTATTT+TGG | - | chr6_1:27977614-27977633 | Msa0881030:intron | 45.0% |
| CTAAAGATGGAGTCCTGCTT+TGG | - | chr6_1:27978173-27978192 | Msa0881030:CDS | 45.0% | |
| CGCTGATCATTTACCAAAGC+AGG | + | chr6_1:27978189-27978208 | None:intergenic | 45.0% | |
| GCGAGCCATTAACACAAAAC+GGG | - | chr6_1:27978332-27978351 | Msa0881030:intron | 45.0% | |
| ! | TGGTTTTCATTCCTCTCCCA+TGG | + | chr6_1:27978366-27978385 | None:intergenic | 45.0% |
| AGGAATGAAAACCACACCCT+TGG | - | chr6_1:27978372-27978391 | Msa0881030:intron | 45.0% | |
| CTTTGCTGAATTGAGGCCAA+GGG | + | chr6_1:27978391-27978410 | None:intergenic | 45.0% | |
| GGGTGCACAGTGGTTAATAT+TGG | - | chr6_1:27978417-27978436 | Msa0881030:intron | 45.0% | |
| GGTACACAGGATATGGTTGA+AGG | - | chr6_1:27978438-27978457 | Msa0881030:intron | 45.0% | |
| GGAGCTTATCAGTTTACCAC+CGG | - | chr6_1:27978945-27978964 | Msa0881030:intron | 45.0% | |
| TATCAGTTTACCACCGGACA+AGG | - | chr6_1:27978951-27978970 | Msa0881030:intron | 45.0% | |
| TCTACAGTTCATCGCACTAG+AGG | + | chr6_1:27979326-27979345 | None:intergenic | 45.0% | |
| CACTTATGGTCAAGGCAGAT+GGG | + | chr6_1:27979705-27979724 | None:intergenic | 45.0% | |
| TCACTTATGGTCAAGGCAGA+TGG | + | chr6_1:27979706-27979725 | None:intergenic | 45.0% | |
| TGTCGGATCACTTATGGTCA+AGG | + | chr6_1:27979713-27979732 | None:intergenic | 45.0% | |
| CAAGAGATACCTCACTCCAA+AGG | - | chr6_1:27979777-27979796 | Msa0881030:intron | 45.0% | |
| !! | CAACTATGTCCTTTGGAGTG+AGG | + | chr6_1:27979789-27979808 | None:intergenic | 45.0% |
| GACCCTTCAACTATGTCCTT+TGG | + | chr6_1:27979796-27979815 | None:intergenic | 45.0% | |
| ATCAGTCATCATCTCAGCGA+AGG | + | chr6_1:27980351-27980370 | None:intergenic | 45.0% | |
| ! | CTGATGATGCACAGACATCT+CGG | - | chr6_1:27980366-27980385 | Msa0881030:intron | 45.0% |
| ! | TGATGATGCACAGACATCTC+GGG | - | chr6_1:27980367-27980386 | Msa0881030:intron | 45.0% |
| AGACTCTGGATCAACAGTCT+TGG | - | chr6_1:27980404-27980423 | Msa0881030:intron | 45.0% | |
| TGCTTCCAATTGACAGATCC+AGG | + | chr6_1:27980612-27980631 | None:intergenic | 45.0% | |
| TGGATCTGTCAATTGGAAGC+AGG | - | chr6_1:27980611-27980630 | Msa0881030:intron | 45.0% | |
| CAGTTCTCCACTTTCCGAAA+TGG | + | chr6_1:27980660-27980679 | None:intergenic | 45.0% | |
| CAAGAACATATCGGGCCTAT+TGG | + | chr6_1:27980902-27980921 | None:intergenic | 45.0% | |
| !! | GTTTCGAGTTGGTTTCCATG+CGG | + | chr6_1:27981111-27981130 | None:intergenic | 45.0% |
| CTGTATTAGGCGACTCTTGA+TGG | - | chr6_1:27981188-27981207 | Msa0881030:CDS | 45.0% | |
| ! | GGGAGAGAAAGGTATAGGAT+AGG | + | chr6_1:27981537-27981556 | None:intergenic | 45.0% |
| AGATAACGCATGGGAAACAG+GGG | + | chr6_1:27981644-27981663 | None:intergenic | 45.0% | |
| CTAGATAACGCATGGGAAAC+AGG | + | chr6_1:27981646-27981665 | None:intergenic | 45.0% | |
| TCCCATGCGTTATCTAGCAT+AGG | - | chr6_1:27981649-27981668 | Msa0881030:CDS | 45.0% | |
| CTCCTATGCTAGATAACGCA+TGG | + | chr6_1:27981654-27981673 | None:intergenic | 45.0% | |
| !! | CTAGCATAGGAGTGTCTAAC+AGG | - | chr6_1:27981662-27981681 | Msa0881030:CDS | 45.0% |
| AGCTGCCACAAAAAAGCTGT+TGG | + | chr6_1:27981707-27981726 | None:intergenic | 45.0% | |
| AACTTGAGATCACACTCCCA+AGG | - | chr6_1:27981758-27981777 | Msa0881030:intron | 45.0% | |
| AGCCGGAAGAACATCTGAAA+TGG | - | chr6_1:27981835-27981854 | Msa0881030:CDS | 45.0% | |
| GTCCTCAGGTAACAGGAAAA+TGG | + | chr6_1:27982553-27982572 | None:intergenic | 45.0% | |
| CGATTATGTCCTCAGGTAAC+AGG | + | chr6_1:27982560-27982579 | None:intergenic | 45.0% | |
| GTTACCTGAGGACATAATCG+AGG | - | chr6_1:27982560-27982579 | Msa0881030:intron | 45.0% | |
| CTTACCTCGATTATGTCCTC+AGG | + | chr6_1:27982567-27982586 | None:intergenic | 45.0% | |
| CTGAGGACATAATCGAGGTA+AGG | - | chr6_1:27982565-27982584 | Msa0881030:intron | 45.0% | |
| ! | ATCTTCTGGTTGACCTGTCA+AGG | + | chr6_1:27982798-27982817 | None:intergenic | 45.0% |
| GAAGCTACAGGTGATGTTTC+TGG | + | chr6_1:27982885-27982904 | None:intergenic | 45.0% | |
| AATGCCAACTCTCCTTAAGC+TGG | - | chr6_1:27982978-27982997 | Msa0881030:intron | 45.0% | |
| AGATTCACACTGCCAGCTTA+AGG | + | chr6_1:27982993-27983012 | None:intergenic | 45.0% | |
| AATGGAGTGCAAGCACGAAT+TGG | + | chr6_1:27983317-27983336 | None:intergenic | 45.0% | |
| ! | TCAATCGGGTCGTGTTGTTG+TGG | - | chr6_1:27977138-27977157 | Msa0881030:CDS | 50.0% |
| ! | CAATCGGGTCGTGTTGTTGT+GGG | - | chr6_1:27977139-27977158 | Msa0881030:CDS | 50.0% |
| AGGGGAGATGCGGATAATTG+AGG | + | chr6_1:27977483-27977502 | None:intergenic | 50.0% | |
| CAAACTCGAGCTGCAGCAAA+AGG | - | chr6_1:27977971-27977990 | Msa0881030:intron | 50.0% | |
| GGGATCTTAATCCATGGGAG+AGG | - | chr6_1:27978352-27978371 | Msa0881030:intron | 50.0% | |
| CCTTTGCTGAATTGAGGCCA+AGG | + | chr6_1:27978392-27978411 | None:intergenic | 50.0% | |
| CCTTGGCCTCAATTCAGCAA+AGG | - | chr6_1:27978389-27978408 | Msa0881030:intron | 50.0% | |
| AAAGGCTATTGGGTGCACAG+TGG | - | chr6_1:27978407-27978426 | Msa0881030:intron | 50.0% | |
| GACAAAATGGCAGGATGTGG+AGG | - | chr6_1:27978924-27978943 | Msa0881030:intron | 50.0% | |
| CAGAACAACAGGGGCTCATA+AGG | + | chr6_1:27979396-27979415 | None:intergenic | 50.0% | |
| AAAGAGGACGGGGTAGTTGA+TGG | - | chr6_1:27980143-27980162 | Msa0881030:CDS | 50.0% | |
| GAGGACGGATCTATAGCTGA+TGG | - | chr6_1:27980269-27980288 | Msa0881030:CDS | 50.0% | |
| AAACTCCAGTTGACCACCCT+TGG | + | chr6_1:27982306-27982325 | None:intergenic | 50.0% | |
| TCACCTGTAGCTTCAGCAGA+TGG | - | chr6_1:27982891-27982910 | Msa0881030:intron | 50.0% | |
| ACTGCCAGCTTAAGGAGAGT+TGG | + | chr6_1:27982985-27983004 | None:intergenic | 50.0% | |
| CTGGCAGTGTGAATCTCTGT+CGG | - | chr6_1:27982997-27983016 | Msa0881030:CDS | 50.0% | |
| ! | TTTGGTGATAGGACCCGCGA+AGG | + | chr6_1:27976616-27976635 | None:intergenic | 55.0% |
| ACTCGAGCTGCAGCAAAAGG+TGG | - | chr6_1:27977974-27977993 | Msa0881030:intron | 55.0% | |
| GCTCGCTCATCTATTGTCCC+AGG | + | chr6_1:27978318-27978337 | None:intergenic | 55.0% | |
| CTGAATTGAGGCCAAGGGTG+TGG | + | chr6_1:27978386-27978405 | None:intergenic | 55.0% | |
| GCTCTTGCTCCAGAAACTGC+AGG | - | chr6_1:27979679-27979698 | Msa0881030:intron | 55.0% | |
| TTGGCAACCTCCCTGCCTTA+AGG | - | chr6_1:27981481-27981500 | Msa0881030:intron | 55.0% | |
| TGTGAAGCCTTAAGGCAGGG+AGG | + | chr6_1:27981491-27981510 | None:intergenic | 55.0% | |
| CGTAACAACCTTGCCTGTGC+GGG | + | chr6_1:27981594-27981613 | None:intergenic | 55.0% | |
| CCGTAACAACCTTGCCTGTG+CGG | + | chr6_1:27981595-27981614 | None:intergenic | 55.0% | |
| CCGCACAGGCAAGGTTGTTA+CGG | - | chr6_1:27981592-27981611 | Msa0881030:CDS | 55.0% | |
| ACGCATGGGAAACAGGGGAA+GGG | + | chr6_1:27981639-27981658 | None:intergenic | 55.0% | |
| AACGCATGGGAAACAGGGGA+AGG | + | chr6_1:27981640-27981659 | None:intergenic | 55.0% | |
| CCACAGCGCTCAAAAGCTCA+AGG | + | chr6_1:27982281-27982300 | None:intergenic | 55.0% | |
| !! | CCTTGAGCTTTTGAGCGCTG+TGG | - | chr6_1:27982278-27982297 | Msa0881030:intron | 55.0% |
| !! | TTTTGAGCGCTGTGGAGCCA+AGG | - | chr6_1:27982286-27982305 | Msa0881030:intron | 55.0% |
| ! | TTTGAGCGCTGTGGAGCCAA+GGG | - | chr6_1:27982287-27982306 | Msa0881030:intron | 55.0% |
| TCGCCATCTGCTGAAGCTAC+AGG | + | chr6_1:27982897-27982916 | None:intergenic | 55.0% | |
| GATAGGACCCGCGAAGGAGA+AGG | + | chr6_1:27976610-27976629 | None:intergenic | 60.0% | |
| CGAGCTGCAGCAAAAGGTGG+CGG | - | chr6_1:27977977-27977996 | Msa0881030:intron | 60.0% | |
| GCAGATGGGCCTGCAGTTTC+TGG | + | chr6_1:27979691-27979710 | None:intergenic | 60.0% | |
| AGGGGAAGGGGGGAAGAAAC+AGG | + | chr6_1:27981626-27981645 | None:intergenic | 60.0% | |
| CATGGGAAACAGGGGAAGGG+GGG | + | chr6_1:27981636-27981655 | None:intergenic | 60.0% | |
| GCATGGGAAACAGGGGAAGG+GGG | + | chr6_1:27981637-27981656 | None:intergenic | 60.0% | |
| CGCATGGGAAACAGGGGAAG+GGG | + | chr6_1:27981638-27981657 | None:intergenic | 60.0% | |
| CAAAGGGGCAGTGTGCACAG+TGG | - | chr6_1:27982164-27982183 | Msa0881030:intron | 60.0% | |
| TGGAGCCAAGGGTGGTCAAC+TGG | - | chr6_1:27982298-27982317 | Msa0881030:intron | 60.0% | |
| GAAAGACGAAGCCGGCCTCT+TGG | - | chr6_1:27983096-27983115 | Msa0881030:five_prime_UTR | 60.0% | |
| ! | CTTTTGCGCCGAGCACCAAG+AGG | + | chr6_1:27983114-27983133 | None:intergenic | 60.0% |
| TGCGGGCAAGGAGGGGGAAA+TGG | + | chr6_1:27981577-27981596 | None:intergenic | 65.0% | |
| TTGCCTGTGCGGGCAAGGAG+GGG | + | chr6_1:27981584-27981603 | None:intergenic | 65.0% | |
| CTTGCCTGTGCGGGCAAGGA+GGG | + | chr6_1:27981585-27981604 | None:intergenic | 65.0% | |
| CAACCTTGCCTGTGCGGGCA+AGG | + | chr6_1:27981589-27981608 | None:intergenic | 65.0% | |
| !! | GAAGCCGGCCTCTTGGTGCT+CGG | - | chr6_1:27983103-27983122 | Msa0881030:intron | 65.0% |
| TTCCCCCTCCTTGCCCGCAC+AGG | - | chr6_1:27981578-27981597 | Msa0881030:CDS | 70.0% | |
| TGCCTGTGCGGGCAAGGAGG+GGG | + | chr6_1:27981583-27981602 | None:intergenic | 70.0% | |
| CCTTGCCTGTGCGGGCAAGG+AGG | + | chr6_1:27981586-27981605 | None:intergenic | 70.0% | |
| CCTCCTTGCCCGCACAGGCA+AGG | - | chr6_1:27981583-27981602 | Msa0881030:CDS | 70.0% | |
| ! | GAGCGCTGTGGAGCCAAGGG+TGG | - | chr6_1:27982290-27982309 | Msa0881030:intron | 70.0% |
| TGCGCCGAGCACCAAGAGGC+CGG | + | chr6_1:27983110-27983129 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 27976583 | 27983394 | 27976583 | ID=Msa0881030;Name=Msa0881030 |
| chr6_1 | mRNA | 27976583 | 27983394 | 27976583 | ID=Msa0881030-mRNA-1;Parent=Msa0881030;Name=Msa0881030-mRNA-1;_AED=0.11;_eAED=0.11;_QI=224|1|1|1|0.92|0.86|15|399|666 |
| chr6_1 | exon | 27976583 | 27977173 | 27976583 | ID=Msa0881030-mRNA-1:exon:6977;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27977396 | 27977487 | 27977396 | ID=Msa0881030-mRNA-1:exon:6976;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27977632 | 27977728 | 27977632 | ID=Msa0881030-mRNA-1:exon:6975;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27978109 | 27978266 | 27978109 | ID=Msa0881030-mRNA-1:exon:6974;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27979203 | 27979402 | 27979203 | ID=Msa0881030-mRNA-1:exon:6973;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27979506 | 27979661 | 27979506 | ID=Msa0881030-mRNA-1:exon:6972;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27980117 | 27980328 | 27980117 | ID=Msa0881030-mRNA-1:exon:6971;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27980924 | 27981040 | 27980924 | ID=Msa0881030-mRNA-1:exon:6970;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27981163 | 27981231 | 27981163 | ID=Msa0881030-mRNA-1:exon:6969;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27981378 | 27981416 | 27981378 | ID=Msa0881030-mRNA-1:exon:6968;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27981513 | 27981684 | 27981513 | ID=Msa0881030-mRNA-1:exon:6967;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27981783 | 27982021 | 27981783 | ID=Msa0881030-mRNA-1:exon:6966;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27982686 | 27982856 | 27982686 | ID=Msa0881030-mRNA-1:exon:6965;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27982979 | 27983119 | 27982979 | ID=Msa0881030-mRNA-1:exon:6964;Parent=Msa0881030-mRNA-1 |
| chr6_1 | exon | 27983225 | 27983394 | 27983225 | ID=Msa0881030-mRNA-1:exon:6963;Parent=Msa0881030-mRNA-1 |
| chr6_1 | five_prime_UTR | 27983225 | 27983394 | 27983225 | ID=Msa0881030-mRNA-1:five_prime_utr;Parent=Msa0881030-mRNA-1 |
| chr6_1 | five_prime_UTR | 27983066 | 27983119 | 27983066 | ID=Msa0881030-mRNA-1:five_prime_utr;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27982979 | 27983065 | 27982979 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27982686 | 27982856 | 27982686 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27981783 | 27982021 | 27981783 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27981513 | 27981684 | 27981513 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27981378 | 27981416 | 27981378 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27981163 | 27981231 | 27981163 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27980924 | 27981040 | 27980924 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27980117 | 27980328 | 27980117 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27979506 | 27979661 | 27979506 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27979203 | 27979402 | 27979203 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27978109 | 27978266 | 27978109 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27977632 | 27977728 | 27977632 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27977396 | 27977487 | 27977396 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | CDS | 27976982 | 27977173 | 27976982 | ID=Msa0881030-mRNA-1:cds;Parent=Msa0881030-mRNA-1 |
| chr6_1 | three_prime_UTR | 27976583 | 27976981 | 27976583 | ID=Msa0881030-mRNA-1:three_prime_utr;Parent=Msa0881030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
