Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102750 | sp|B6ETT4|SYT2_ARATH | 71.881 | 537 | 146 | 2 | 1 | 534 | 1 | 535 | 0.0 | 828 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102750 | G7I7R4 | 98.879 | 535 | 6 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1081 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000550 | Msa0102750 | -0.836874 | 7.245708e-57 | -8.615850e-47 |
Msa0003440 | Msa0102750 | 0.813906 | 2.018643e-51 | -8.615850e-47 |
Msa0007080 | Msa0102750 | 0.807679 | 4.492179e-50 | -8.615850e-47 |
Msa0008340 | Msa0102750 | 0.809596 | 1.750005e-50 | -8.615850e-47 |
Msa0011720 | Msa0102750 | 0.804665 | 1.936932e-49 | -8.615850e-47 |
Msa0011850 | Msa0102750 | 0.858066 | 1.062833e-62 | -8.615850e-47 |
Msa0015940 | Msa0102750 | 0.818955 | 1.495803e-52 | -8.615850e-47 |
Msa0029540 | Msa0102750 | -0.841972 | 3.435017e-58 | -8.615850e-47 |
Msa0046310 | Msa0102750 | 0.881862 | 1.686160e-70 | -8.615850e-47 |
Msa0048000 | Msa0102750 | 0.865671 | 4.985090e-65 | -8.615850e-47 |
Msa0050730 | Msa0102750 | 0.872633 | 2.736466e-67 | -8.615850e-47 |
Msa0050760 | Msa0102750 | 0.877444 | 6.253910e-69 | -8.615850e-47 |
Msa0058340 | Msa0102750 | 0.845862 | 3.117219e-59 | -8.615850e-47 |
Msa0069260 | Msa0102750 | 0.842053 | 3.270527e-58 | -8.615850e-47 |
Msa0069280 | Msa0102750 | 0.817585 | 3.054978e-52 | -8.615850e-47 |
Msa0069310 | Msa0102750 | 0.842535 | 2.437171e-58 | -8.615850e-47 |
Msa0077450 | Msa0102750 | 0.802319 | 5.934663e-49 | -8.615850e-47 |
Msa0085240 | Msa0102750 | 0.840122 | 1.051378e-57 | -8.615850e-47 |
Msa0085250 | Msa0102750 | 0.846938 | 1.585228e-59 | -8.615850e-47 |
Msa0090280 | Msa0102750 | -0.812794 | 3.543071e-51 | -8.615850e-47 |
Msa0098430 | Msa0102750 | 0.807707 | 4.431029e-50 | -8.615850e-47 |
Msa0101810 | Msa0102750 | -0.810524 | 1.104664e-50 | -8.615850e-47 |
Msa0102680 | Msa0102750 | 0.954105 | 6.237802e-112 | -8.615850e-47 |
Msa0102750 | Msa0105340 | 0.812884 | 3.387186e-51 | -8.615850e-47 |
Msa0102750 | Msa0105420 | 0.889826 | 1.710611e-73 | -8.615850e-47 |
Msa0102750 | Msa0108850 | 0.802998 | 4.298735e-49 | -8.615850e-47 |
Msa0102750 | Msa0115810 | 0.814914 | 1.208893e-51 | -8.615850e-47 |
Msa0102750 | Msa0137660 | -0.826876 | 2.132178e-54 | -8.615850e-47 |
Msa0102750 | Msa0138970 | -0.842104 | 3.169268e-58 | -8.615850e-47 |
Msa0102750 | Msa0140910 | 0.831268 | 1.837686e-55 | -8.615850e-47 |
Msa0102750 | Msa0151690 | 0.812095 | 5.037594e-51 | -8.615850e-47 |
Msa0102750 | Msa0151950 | 0.803091 | 4.112156e-49 | -8.615850e-47 |
Msa0102750 | Msa0165430 | 0.838437 | 2.878203e-57 | -8.615850e-47 |
Msa0102750 | Msa0170140 | 0.814205 | 1.734618e-51 | -8.615850e-47 |
Msa0102750 | Msa0172350 | 0.810624 | 1.050653e-50 | -8.615850e-47 |
Msa0102750 | Msa0177650 | 0.826371 | 2.813749e-54 | -8.615850e-47 |
Msa0102750 | Msa0182750 | -0.830235 | 3.291562e-55 | -8.615850e-47 |
Msa0102750 | Msa0185480 | 0.800402 | 1.466055e-48 | -8.615850e-47 |
Msa0102750 | Msa0188630 | 0.819097 | 1.389093e-52 | -8.615850e-47 |
Msa0102750 | Msa0189950 | 0.811778 | 5.905233e-51 | -8.615850e-47 |
Msa0102750 | Msa0190830 | 0.803199 | 3.907700e-49 | -8.615850e-47 |
Msa0102750 | Msa0191250 | 0.805089 | 1.579397e-49 | -8.615850e-47 |
Msa0102750 | Msa0193650 | 0.888915 | 3.864489e-73 | -8.615850e-47 |
Msa0102750 | Msa0195770 | 0.806733 | 7.128733e-50 | -8.615850e-47 |
Msa0102750 | Msa0196130 | -0.805574 | 1.250113e-49 | -8.615850e-47 |
Msa0102750 | Msa0197850 | 0.804492 | 2.104597e-49 | -8.615850e-47 |
Msa0102750 | Msa0217400 | 0.876425 | 1.410893e-68 | -8.615850e-47 |
Msa0102750 | Msa0219070 | 0.835391 | 1.724488e-56 | -8.615850e-47 |
Msa0102750 | Msa0222920 | 0.824328 | 8.564984e-54 | -8.615850e-47 |
Msa0102750 | Msa0223290 | 0.806301 | 8.793282e-50 | -8.615850e-47 |
Msa0102750 | Msa0223380 | 0.819117 | 1.374504e-52 | -8.615850e-47 |
Msa0102750 | Msa0227510 | 0.831535 | 1.579721e-55 | -8.615850e-47 |
Msa0102750 | Msa0233190 | 0.817287 | 3.566420e-52 | -8.615850e-47 |
Msa0102750 | Msa0239510 | 0.822616 | 2.154034e-53 | -8.615850e-47 |
Msa0102750 | Msa0243710 | 0.826540 | 2.565030e-54 | -8.615850e-47 |
Msa0102750 | Msa0253370 | 0.811042 | 8.530248e-51 | -8.615850e-47 |
Msa0102750 | Msa0257250 | 0.852970 | 3.253377e-61 | -8.615850e-47 |
Msa0102750 | Msa0258760 | 0.805935 | 1.049635e-49 | -8.615850e-47 |
Msa0102750 | Msa0260810 | 0.866888 | 2.050698e-65 | -8.615850e-47 |
Msa0102750 | Msa0260820 | -0.842592 | 2.353918e-58 | -8.615850e-47 |
Msa0102750 | Msa0264350 | 0.829157 | 6.022320e-55 | -8.615850e-47 |
Msa0102750 | Msa0266000 | -0.869676 | 2.589325e-66 | -8.615850e-47 |
Msa0102750 | Msa0267760 | 0.802756 | 4.822732e-49 | -8.615850e-47 |
Msa0102750 | Msa0269280 | 0.810664 | 1.030301e-50 | -8.615850e-47 |
Msa0102750 | Msa0275400 | -0.803858 | 2.851548e-49 | -8.615850e-47 |
Msa0102750 | Msa0275670 | 0.816030 | 6.822893e-52 | -8.615850e-47 |
Msa0102750 | Msa0276920 | 0.815625 | 8.397489e-52 | -8.615850e-47 |
Msa0102750 | Msa0279640 | 0.804467 | 2.130112e-49 | -8.615850e-47 |
Msa0102750 | Msa0282250 | 0.809085 | 2.252142e-50 | -8.615850e-47 |
Msa0102750 | Msa0288320 | 0.815429 | 9.286777e-52 | -8.615850e-47 |
Msa0102750 | Msa0290650 | 0.820611 | 6.261275e-53 | -8.615850e-47 |
Msa0102750 | Msa0296560 | 0.861501 | 9.814937e-64 | -8.615850e-47 |
Msa0102750 | Msa0302450 | 0.802287 | 6.027514e-49 | -8.615850e-47 |
Msa0102750 | Msa0304700 | 0.820600 | 6.296172e-53 | -8.615850e-47 |
Msa0102750 | Msa0304740 | 0.807699 | 4.448141e-50 | -8.615850e-47 |
Msa0102750 | Msa0306130 | 0.804587 | 2.011071e-49 | -8.615850e-47 |
Msa0102750 | Msa0307110 | 0.836842 | 7.382607e-57 | -8.615850e-47 |
Msa0102750 | Msa0311580 | 0.817356 | 3.440669e-52 | -8.615850e-47 |
Msa0102750 | Msa0312310 | 0.805534 | 1.274689e-49 | -8.615850e-47 |
Msa0102750 | Msa0313270 | 0.803944 | 2.737062e-49 | -8.615850e-47 |
Msa0102750 | Msa0313990 | 0.897347 | 1.535005e-76 | -8.615850e-47 |
Msa0102750 | Msa0315150 | 0.803442 | 3.478982e-49 | -8.615850e-47 |
Msa0102750 | Msa0316850 | 0.809181 | 2.148607e-50 | -8.615850e-47 |
Msa0102750 | Msa0317390 | 0.831263 | 1.843464e-55 | -8.615850e-47 |
Msa0102750 | Msa0323180 | 0.809393 | 1.935163e-50 | -8.615850e-47 |
Msa0102750 | Msa0333720 | -0.818828 | 1.598521e-52 | -8.615850e-47 |
Msa0102750 | Msa0335040 | 0.867408 | 1.398997e-65 | -8.615850e-47 |
Msa0102750 | Msa0344870 | 0.803852 | 2.860151e-49 | -8.615850e-47 |
Msa0102750 | Msa0347650 | 0.812930 | 3.308146e-51 | -8.615850e-47 |
Msa0102750 | Msa0354800 | -0.801439 | 8.999467e-49 | -8.615850e-47 |
Msa0102750 | Msa0356890 | -0.836325 | 9.999406e-57 | -8.615850e-47 |
Msa0102750 | Msa0365490 | 0.813284 | 2.767130e-51 | -8.615850e-47 |
Msa0102750 | Msa0371420 | -0.842069 | 3.238079e-58 | -8.615850e-47 |
Msa0102750 | Msa0371610 | 0.801594 | 8.364641e-49 | -8.615850e-47 |
Msa0102750 | Msa0376590 | 0.818381 | 2.019609e-52 | -8.615850e-47 |
Msa0102750 | Msa0389340 | 0.805585 | 1.243115e-49 | -8.615850e-47 |
Msa0102750 | Msa0414070 | 0.804388 | 2.213005e-49 | -8.615850e-47 |
Msa0102750 | Msa0414950 | -0.822482 | 2.313614e-53 | -8.615850e-47 |
Msa0102750 | Msa0423360 | -0.822247 | 2.624099e-53 | -8.615850e-47 |
Msa0102750 | Msa0424990 | 0.800937 | 1.140220e-48 | -8.615850e-47 |
Msa0102750 | Msa0436370 | 0.832014 | 1.203829e-55 | -8.615850e-47 |
Msa0102750 | Msa0437710 | 0.811803 | 5.832235e-51 | -8.615850e-47 |
Msa0102750 | Msa0448550 | -0.839443 | 1.579646e-57 | -8.615850e-47 |
Msa0102750 | Msa0449760 | 0.823181 | 1.590376e-53 | -8.615850e-47 |
Msa0102750 | Msa0458440 | 0.820420 | 6.926187e-53 | -8.615850e-47 |
Msa0102750 | Msa0459120 | 0.806453 | 8.165946e-50 | -8.615850e-47 |
Msa0102750 | Msa0464900 | 0.833050 | 6.661615e-56 | -8.615850e-47 |
Msa0102750 | Msa0465680 | -0.850578 | 1.551014e-60 | -8.615850e-47 |
Msa0102750 | Msa0467900 | -0.821665 | 3.578896e-53 | -8.615850e-47 |
Msa0102750 | Msa0469160 | 0.816270 | 6.029755e-52 | -8.615850e-47 |
Msa0102750 | Msa0473240 | 0.834881 | 2.318739e-56 | -8.615850e-47 |
Msa0102750 | Msa0480600 | 0.838571 | 2.657755e-57 | -8.615850e-47 |
Msa0102750 | Msa0484780 | 0.803249 | 3.814453e-49 | -8.615850e-47 |
Msa0102750 | Msa0490350 | 0.814260 | 1.686338e-51 | -8.615850e-47 |
Msa0102750 | Msa0492880 | 0.802042 | 6.767749e-49 | -8.615850e-47 |
Msa0102750 | Msa0505060 | 0.809501 | 1.834298e-50 | -8.615850e-47 |
Msa0102750 | Msa0505660 | 0.815955 | 7.091593e-52 | -8.615850e-47 |
Msa0102750 | Msa0508200 | 0.817807 | 2.722584e-52 | -8.615850e-47 |
Msa0102750 | Msa0509970 | 0.810420 | 1.162971e-50 | -8.615850e-47 |
Msa0102750 | Msa0511890 | 0.805422 | 1.345338e-49 | -8.615850e-47 |
Msa0102750 | Msa0516370 | 0.819257 | 1.276784e-52 | -8.615850e-47 |
Msa0102750 | Msa0517490 | 0.801837 | 7.458691e-49 | -8.615850e-47 |
Msa0102750 | Msa0524200 | -0.818073 | 2.371219e-52 | -8.615850e-47 |
Msa0102750 | Msa0526710 | 0.803295 | 3.731174e-49 | -8.615850e-47 |
Msa0102750 | Msa0526940 | 0.801251 | 9.831623e-49 | -8.615850e-47 |
Msa0102750 | Msa0535450 | 0.840254 | 9.711836e-58 | -8.615850e-47 |
Msa0102750 | Msa0536220 | 0.808809 | 2.580839e-50 | -8.615850e-47 |
Msa0102750 | Msa0567020 | 0.836975 | 6.828981e-57 | -8.615850e-47 |
Msa0102750 | Msa0572420 | 0.817767 | 2.780371e-52 | -8.615850e-47 |
Msa0102750 | Msa0572480 | 0.821723 | 3.470184e-53 | -8.615850e-47 |
Msa0102750 | Msa0574760 | -0.802823 | 4.672089e-49 | -8.615850e-47 |
Msa0102750 | Msa0578970 | 0.821915 | 3.131551e-53 | -8.615850e-47 |
Msa0102750 | Msa0585700 | 0.813949 | 1.975009e-51 | -8.615850e-47 |
Msa0102750 | Msa0587690 | 0.809921 | 1.489499e-50 | -8.615850e-47 |
Msa0102750 | Msa0599580 | 0.805638 | 1.211908e-49 | -8.615850e-47 |
Msa0102750 | Msa0608200 | 0.805756 | 1.144489e-49 | -8.615850e-47 |
Msa0102750 | Msa0610590 | 0.824312 | 8.641233e-54 | -8.615850e-47 |
Msa0102750 | Msa0621590 | 0.819231 | 1.294364e-52 | -8.615850e-47 |
Msa0102750 | Msa0621890 | 0.807323 | 5.347487e-50 | -8.615850e-47 |
Msa0102750 | Msa0622340 | 0.811870 | 5.639425e-51 | -8.615850e-47 |
Msa0102750 | Msa0625930 | 0.805017 | 1.635356e-49 | -8.615850e-47 |
Msa0102750 | Msa0631840 | 0.810652 | 1.036228e-50 | -8.615850e-47 |
Msa0102750 | Msa0647130 | 0.801055 | 1.078426e-48 | -8.615850e-47 |
Msa0102750 | Msa0648520 | 0.801167 | 1.023079e-48 | -8.615850e-47 |
Msa0102750 | Msa0651190 | 0.832563 | 8.803213e-56 | -8.615850e-47 |
Msa0102750 | Msa0658570 | 0.834069 | 3.708850e-56 | -8.615850e-47 |
Msa0102750 | Msa0670980 | 0.808023 | 3.795618e-50 | -8.615850e-47 |
Msa0102750 | Msa0677400 | 0.818412 | 1.987105e-52 | -8.615850e-47 |
Msa0102750 | Msa0691050 | 0.838390 | 2.958388e-57 | -8.615850e-47 |
Msa0102750 | Msa0692230 | 0.807922 | 3.989395e-50 | -8.615850e-47 |
Msa0102750 | Msa0693380 | 0.801887 | 7.282454e-49 | -8.615850e-47 |
Msa0102750 | Msa0694250 | 0.800626 | 1.319255e-48 | -8.615850e-47 |
Msa0102750 | Msa0703490 | 0.830317 | 3.143433e-55 | -8.615850e-47 |
Msa0102750 | Msa0721150 | 0.827990 | 1.152825e-54 | -8.615850e-47 |
Msa0102750 | Msa0735620 | -0.803089 | 4.117092e-49 | -8.615850e-47 |
Msa0102750 | Msa0738940 | 0.807762 | 4.313470e-50 | -8.615850e-47 |
Msa0102750 | Msa0753340 | 0.814368 | 1.596712e-51 | -8.615850e-47 |
Msa0102750 | Msa0754680 | 0.820966 | 5.187088e-53 | -8.615850e-47 |
Msa0102750 | Msa0754720 | -0.845840 | 3.159598e-59 | -8.615850e-47 |
Msa0102750 | Msa0756630 | -0.823828 | 1.122260e-53 | -8.615850e-47 |
Msa0102750 | Msa0757050 | 0.804678 | 1.924937e-49 | -8.615850e-47 |
Msa0102750 | Msa0757950 | 0.822167 | 2.737327e-53 | -8.615850e-47 |
Msa0102750 | Msa0758580 | 0.822323 | 2.519375e-53 | -8.615850e-47 |
Msa0102750 | Msa0761760 | 0.824659 | 7.161292e-54 | -8.615850e-47 |
Msa0102750 | Msa0791070 | 0.826242 | 3.021325e-54 | -8.615850e-47 |
Msa0102750 | Msa0795390 | 0.818382 | 2.018382e-52 | -8.615850e-47 |
Msa0102750 | Msa0797350 | 0.804392 | 2.208238e-49 | -8.615850e-47 |
Msa0102750 | Msa0798030 | 0.800074 | 1.708854e-48 | -8.615850e-47 |
Msa0102750 | Msa0798070 | 0.804496 | 2.101224e-49 | -8.615850e-47 |
Msa0102750 | Msa0801710 | 0.812846 | 3.452006e-51 | -8.615850e-47 |
Msa0102750 | Msa0804060 | 0.821945 | 3.082481e-53 | -8.615850e-47 |
Msa0102750 | Msa0804680 | 0.807104 | 5.950084e-50 | -8.615850e-47 |
Msa0102750 | Msa0810480 | 0.802076 | 6.659066e-49 | -8.615850e-47 |
Msa0102750 | Msa0818110 | 0.816664 | 4.921749e-52 | -8.615850e-47 |
Msa0102750 | Msa0819430 | 0.802323 | 5.925800e-49 | -8.615850e-47 |
Msa0102750 | Msa0829620 | 0.814080 | 1.847868e-51 | -8.615850e-47 |
Msa0102750 | Msa0832570 | 0.800521 | 1.385933e-48 | -8.615850e-47 |
Msa0102750 | Msa0837990 | 0.803707 | 3.065790e-49 | -8.615850e-47 |
Msa0102750 | Msa0842240 | 0.816790 | 4.611984e-52 | -8.615850e-47 |
Msa0102750 | Msa0844240 | 0.801238 | 9.894598e-49 | -8.615850e-47 |
Msa0102750 | Msa0846810 | 0.818728 | 1.684541e-52 | -8.615850e-47 |
Msa0102750 | Msa0860270 | 0.807191 | 5.703490e-50 | -8.615850e-47 |
Msa0102750 | Msa0867890 | 0.809359 | 1.967699e-50 | -8.615850e-47 |
Msa0102750 | Msa0870530 | 0.838135 | 3.441210e-57 | -8.615850e-47 |
Msa0102750 | Msa0881480 | 0.804869 | 1.755838e-49 | -8.615850e-47 |
Msa0102750 | Msa0891040 | 0.839927 | 1.181989e-57 | -8.615850e-47 |
Msa0102750 | Msa0893810 | 0.846020 | 2.823466e-59 | -8.615850e-47 |
Msa0102750 | Msa0896210 | 0.821218 | 4.539127e-53 | -8.615850e-47 |
Msa0102750 | Msa0896220 | 0.830957 | 2.191971e-55 | -8.615850e-47 |
Msa0102750 | Msa0900200 | 0.832181 | 1.094281e-55 | -8.615850e-47 |
Msa0102750 | Msa0903700 | 0.834715 | 2.553460e-56 | -8.615850e-47 |
Msa0102750 | Msa0908170 | 0.878111 | 3.656598e-69 | -8.615850e-47 |
Msa0102750 | Msa0910980 | -0.836522 | 8.905525e-57 | -8.615850e-47 |
Msa0102750 | Msa0922540 | 0.801211 | 1.002053e-48 | -8.615850e-47 |
Msa0102750 | Msa0926800 | 0.808858 | 2.519606e-50 | -8.615850e-47 |
Msa0102750 | Msa0930910 | -0.800967 | 1.124215e-48 | -8.615850e-47 |
Msa0102750 | Msa0936210 | 0.827077 | 1.909408e-54 | -8.615850e-47 |
Msa0102750 | Msa0944730 | 0.817956 | 2.520256e-52 | -8.615850e-47 |
Msa0102750 | Msa0944770 | 0.805172 | 1.517611e-49 | -8.615850e-47 |
Msa0102750 | Msa0946080 | 0.813599 | 2.359733e-51 | -8.615850e-47 |
Msa0102750 | Msa0959010 | 0.841782 | 3.856226e-58 | -8.615850e-47 |
Msa0102750 | Msa0965520 | 0.849005 | 4.267673e-60 | -8.615850e-47 |
Msa0102750 | Msa0973150 | 0.836912 | 7.085438e-57 | -8.615850e-47 |
Msa0102750 | Msa0982240 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
Msa0102750 | Msa0988500 | 0.804983 | 1.662060e-49 | -8.615850e-47 |
Msa0102750 | Msa0990960 | 0.833286 | 5.819724e-56 | -8.615850e-47 |
Msa0102750 | Msa0993530 | 0.842863 | 1.994534e-58 | -8.615850e-47 |
Msa0102750 | Msa0996080 | 0.800059 | 1.721523e-48 | -8.615850e-47 |
Msa0102750 | Msa0999040 | 0.801137 | 1.037491e-48 | -8.615850e-47 |
Msa0102750 | Msa1000020 | 0.815220 | 1.033588e-51 | -8.615850e-47 |
Msa0102750 | Msa1006850 | 0.806362 | 8.536512e-50 | -8.615850e-47 |
Msa0102750 | Msa1008490 | 0.831211 | 1.897876e-55 | -8.615850e-47 |
Msa0102750 | Msa1009000 | 0.817355 | 3.442697e-52 | -8.615850e-47 |
Msa0102750 | Msa1015060 | 0.802900 | 4.504455e-49 | -8.615850e-47 |
Msa0102750 | Msa1019020 | 0.803544 | 3.314517e-49 | -8.615850e-47 |
Msa0102750 | Msa1020710 | 0.835511 | 1.607796e-56 | -8.615850e-47 |
Msa0102750 | Msa1021510 | 0.816481 | 5.409457e-52 | -8.615850e-47 |
Msa0102750 | Msa1036390 | 0.813906 | 2.019579e-51 | -8.615850e-47 |
Msa0102750 | Msa1040120 | 0.853070 | 3.045554e-61 | -8.615850e-47 |
Msa0102750 | Msa1040520 | 0.810239 | 1.272575e-50 | -8.615850e-47 |
Msa0102750 | Msa1041730 | 0.802298 | 5.995212e-49 | -8.615850e-47 |
Msa0102750 | Msa1043920 | 0.811815 | 5.796563e-51 | -8.615850e-47 |
Msa0102750 | Msa1048700 | 0.813476 | 2.511353e-51 | -8.615850e-47 |
Msa0102750 | Msa1068200 | -0.851115 | 1.095294e-60 | -8.615850e-47 |
Msa0102750 | Msa1075220 | -0.834155 | 3.530061e-56 | -8.615850e-47 |
Msa0102750 | Msa1076680 | 0.808361 | 3.216318e-50 | -8.615850e-47 |
Msa0102750 | Msa1080160 | 0.838262 | 3.192775e-57 | -8.615850e-47 |
Msa0102750 | Msa1080770 | 0.838412 | 2.921013e-57 | -8.615850e-47 |
Msa0102750 | Msa1080790 | 0.802437 | 5.613964e-49 | -8.615850e-47 |
Msa0102750 | Msa1083410 | 0.830959 | 2.188398e-55 | -8.615850e-47 |
Msa0102750 | Msa1084260 | 0.823325 | 1.471931e-53 | -8.615850e-47 |
Msa0102750 | Msa1087470 | 0.844977 | 5.410487e-59 | -8.615850e-47 |
Msa0102750 | Msa1092090 | 0.807587 | 4.699549e-50 | -8.615850e-47 |
Msa0102750 | Msa1092820 | 0.811277 | 7.588857e-51 | -8.615850e-47 |
Msa0102750 | Msa1098560 | 0.826557 | 2.541209e-54 | -8.615850e-47 |
Msa0102750 | Msa1099030 | 0.825408 | 4.765340e-54 | -8.615850e-47 |
Msa0102750 | Msa1104000 | 0.814491 | 1.499355e-51 | -8.615850e-47 |
Msa0102750 | Msa1105500 | 0.805324 | 1.410048e-49 | -8.615850e-47 |
Msa0102750 | Msa1113200 | 0.829649 | 4.574365e-55 | -8.615850e-47 |
Msa0102750 | Msa1116130 | -0.823919 | 1.068650e-53 | -8.615850e-47 |
Msa0102750 | Msa1118930 | 0.806648 | 7.427335e-50 | -8.615850e-47 |
Msa0102750 | Msa1125080 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
Msa0102750 | Msa1127770 | 0.831459 | 1.649486e-55 | -8.615850e-47 |
Msa0102750 | Msa1128160 | 0.801832 | 7.475145e-49 | -8.615850e-47 |
Msa0102750 | Msa1130270 | -0.831002 | 2.136081e-55 | -8.615850e-47 |
Msa0102750 | Msa1135880 | 0.817647 | 2.958127e-52 | -8.615850e-47 |
Msa0102750 | Msa1139000 | -0.833909 | 4.067062e-56 | -8.615850e-47 |
Msa0102750 | Msa1156340 | -0.826917 | 2.085411e-54 | -8.615850e-47 |
Msa0102750 | Msa1158660 | 0.800982 | 1.116249e-48 | -8.615850e-47 |
Msa0102750 | Msa1159130 | 0.820609 | 6.267799e-53 | -8.615850e-47 |
Msa0102750 | Msa1162550 | -0.843603 | 1.265812e-58 | -8.615850e-47 |
Msa0102750 | Msa1165360 | 0.800586 | 1.344256e-48 | -8.615850e-47 |
Msa0102750 | Msa1167220 | 0.803817 | 2.908800e-49 | -8.615850e-47 |
Msa0102750 | Msa1188890 | 0.820573 | 6.386750e-53 | -8.615850e-47 |
Msa0102750 | Msa1204980 | -0.803084 | 4.126981e-49 | -8.615850e-47 |
Msa0102750 | Msa1205010 | -0.806843 | 6.754492e-50 | -8.615850e-47 |
Msa0102750 | Msa1208710 | 0.833363 | 5.569217e-56 | -8.615850e-47 |
Msa0102750 | Msa1208760 | 0.811798 | 5.845954e-51 | -8.615850e-47 |
Msa0102750 | Msa1214880 | 0.810851 | 9.384842e-51 | -8.615850e-47 |
Msa0102750 | Msa1217860 | 0.808008 | 3.823835e-50 | -8.615850e-47 |
Msa0102750 | Msa1217900 | -0.812463 | 4.186347e-51 | -8.615850e-47 |
Msa0102750 | Msa1218650 | 0.807428 | 5.079911e-50 | -8.615850e-47 |
Msa0102750 | Msa1219520 | 0.809102 | 2.233249e-50 | -8.615850e-47 |
Msa0102750 | Msa1220230 | 0.801085 | 1.063283e-48 | -8.615850e-47 |
Msa0102750 | Msa1221700 | 0.800380 | 1.481240e-48 | -8.615850e-47 |
Msa0102750 | Msa1221900 | 0.831365 | 1.739738e-55 | -8.615850e-47 |
Msa0102750 | Msa1228210 | 0.801179 | 1.017149e-48 | -8.615850e-47 |
Msa0102750 | Msa1239720 | 0.803261 | 3.792157e-49 | -8.615850e-47 |
Msa0102750 | Msa1241810 | 0.819676 | 1.024813e-52 | -8.615850e-47 |
Msa0102750 | Msa1243010 | 0.820856 | 5.497711e-53 | -8.615850e-47 |
Msa0102750 | Msa1247030 | 0.801062 | 1.075002e-48 | -8.615850e-47 |
Msa0102750 | Msa1249920 | 0.808481 | 3.032854e-50 | -8.615850e-47 |
Msa0102750 | Msa1258950 | 0.826708 | 2.339537e-54 | -8.615850e-47 |
Msa0102750 | Msa1265070 | 0.855593 | 5.684567e-62 | -8.615850e-47 |
Msa0102750 | Msa1271300 | 0.828145 | 1.057749e-54 | -8.615850e-47 |
Msa0102750 | Msa1278840 | 0.815201 | 1.043626e-51 | -8.615850e-47 |
Msa0102750 | Msa1282930 | 0.809234 | 2.092602e-50 | -8.615850e-47 |
Msa0102750 | Msa1300860 | 0.826262 | 2.988143e-54 | -8.615850e-47 |
Msa0102750 | Msa1318240 | 0.830286 | 3.199609e-55 | -8.615850e-47 |
Msa0102750 | Msa1322190 | 0.802228 | 6.198556e-49 | -8.615850e-47 |
Msa0102750 | Msa1327050 | 0.805911 | 1.062018e-49 | -8.615850e-47 |
Msa0102750 | Msa1331920 | 0.815675 | 8.188165e-52 | -8.615850e-47 |
Msa0102750 | Msa1335770 | 0.813365 | 2.655406e-51 | -8.615850e-47 |
Msa0102750 | Msa1337730 | 0.846519 | 2.064465e-59 | -8.615850e-47 |
Msa0102750 | Msa1340620 | 0.819671 | 1.027466e-52 | -8.615850e-47 |
Msa0102750 | Msa1340650 | 0.819220 | 1.302079e-52 | -8.615850e-47 |
Msa0102750 | Msa1341570 | 0.809248 | 2.078651e-50 | -8.615850e-47 |
Msa0102750 | Msa1350310 | 0.818361 | 2.040628e-52 | -8.615850e-47 |
Msa0102750 | Msa1350840 | 0.801506 | 8.720401e-49 | -8.615850e-47 |
Msa0102750 | Msa1355260 | 0.800378 | 1.482607e-48 | -8.615850e-47 |
Msa0102750 | Msa1358040 | 0.802882 | 4.543556e-49 | -8.615850e-47 |
Msa0102750 | Msa1358870 | -0.817176 | 3.777131e-52 | -8.615850e-47 |
Msa0102750 | Msa1363890 | 0.824892 | 6.310966e-54 | -8.615850e-47 |
Msa0102750 | Msa1365040 | -0.853966 | 1.684529e-61 | -8.615850e-47 |
Msa0102750 | Msa1367390 | -0.822768 | 1.984879e-53 | -8.615850e-47 |
Msa0102750 | Msa1370650 | 0.844553 | 7.041095e-59 | -8.615850e-47 |
Msa0102750 | Msa1376890 | 0.832796 | 7.705807e-56 | -8.615850e-47 |
Msa0102750 | Msa1379850 | 0.831346 | 1.758456e-55 | -8.615850e-47 |
Msa0102750 | Msa1384350 | 0.820202 | 7.770977e-53 | -8.615850e-47 |
Msa0102750 | Msa1390120 | 0.845088 | 5.049332e-59 | -8.615850e-47 |
Msa0102750 | Msa1390310 | 0.803749 | 3.004944e-49 | -8.615850e-47 |
Msa0102750 | Msa1395530 | 0.852456 | 4.561994e-61 | -8.615850e-47 |
Msa0102750 | Msa1395570 | 0.804201 | 2.420766e-49 | -8.615850e-47 |
Msa0102750 | Msa1402270 | 0.808278 | 3.349951e-50 | -8.615850e-47 |
Msa0102750 | Msa1404540 | 0.873626 | 1.270841e-67 | -8.615850e-47 |
Msa0102750 | Msa1404670 | 0.838016 | 3.693108e-57 | -8.615850e-47 |
Msa0102750 | Msa1408790 | 0.846311 | 2.352238e-59 | -8.615850e-47 |
Msa0102750 | Msa1409350 | 0.807191 | 5.703284e-50 | -8.615850e-47 |
Msa0102750 | Msa1409520 | 0.870566 | 1.324913e-66 | -8.615850e-47 |
Msa0102750 | Msa1414740 | 0.836352 | 9.839288e-57 | -8.615850e-47 |
Msa0102750 | Msa1419110 | 0.819401 | 1.183908e-52 | -8.615850e-47 |
Msa0102750 | Msa1423450 | 0.804861 | 1.763027e-49 | -8.615850e-47 |
Msa0102750 | Msa1427760 | 0.816192 | 6.275862e-52 | -8.615850e-47 |
Msa0102750 | Msa1431060 | 0.873142 | 1.848151e-67 | -8.615850e-47 |
Msa0102750 | Msa1435400 | 0.825011 | 5.914121e-54 | -8.615850e-47 |
Msa0102750 | Msa1436040 | 0.849748 | 2.649552e-60 | -8.615850e-47 |
Msa0102750 | Msa1439230 | 0.818940 | 1.507467e-52 | -8.615850e-47 |
Msa0102750 | Msa1439960 | 0.810086 | 1.372495e-50 | -8.615850e-47 |
Msa0102750 | Msa1440600 | 0.879160 | 1.562524e-69 | -8.615850e-47 |
Msa0102750 | Msa1447090 | 0.820841 | 5.543671e-53 | -8.615850e-47 |
Msa0102750 | Msa1451620 | -0.819127 | 1.367266e-52 | -8.615850e-47 |
Msa0102750 | Msa1455390 | 0.838007 | 3.712442e-57 | -8.615850e-47 |
Msa0102750 | Msa1457670 | -0.845740 | 3.362374e-59 | -8.615850e-47 |
Msa0102750 | Msa1465900 | 0.823986 | 1.030812e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102750 | MtrunA17_Chr1g0156811 | 98.879 | 535 | 6 | 0 | 1 | 535 | 1 | 535 | 0.0 | 1081 |
Msa0102750 | MtrunA17_Chr1g0199571 | 52.844 | 545 | 244 | 5 | 1 | 534 | 1 | 543 | 0.0 | 569 |
Msa0102750 | MtrunA17_Chr4g0037111 | 77.673 | 318 | 71 | 0 | 18 | 335 | 18 | 335 | 0.0 | 532 |
Msa0102750 | MtrunA17_Chr4g0037121 | 68.878 | 196 | 57 | 2 | 342 | 534 | 1 | 195 | 6.92e-95 | 287 |
Msa0102750 | MtrunA17_Chr4g0064531 | 31.002 | 529 | 320 | 12 | 40 | 532 | 38 | 557 | 6.49e-75 | 247 |
Msa0102750 | MtrunA17_Chr7g0246311 | 32.945 | 343 | 219 | 6 | 59 | 395 | 58 | 395 | 6.10e-59 | 204 |
Msa0102750 | MtrunA17_Chr3g0137471 | 28.957 | 556 | 295 | 18 | 53 | 532 | 51 | 582 | 1.10e-56 | 199 |
Msa0102750 | MtrunA17_Chr8g0351231 | 31.707 | 410 | 251 | 12 | 1 | 395 | 1 | 396 | 7.48e-54 | 190 |
Msa0102750 | MtrunA17_Chr4g0037181 | 55.856 | 111 | 41 | 2 | 342 | 449 | 1 | 106 | 1.83e-31 | 119 |
Msa0102750 | MtrunA17_Chr7g0249671 | 61.250 | 80 | 29 | 2 | 453 | 531 | 2 | 80 | 1.53e-20 | 85.9 |
Msa0102750 | MtrunA17_Chr2g0313621 | 26.871 | 294 | 185 | 11 | 67 | 336 | 72 | 359 | 4.93e-19 | 90.9 |
Msa0102750 | MtrunA17_Chr6g0478401 | 41.573 | 89 | 47 | 3 | 255 | 343 | 13 | 96 | 3.50e-13 | 68.2 |
Msa0102750 | MtrunA17_Chr6g0484401 | 20.537 | 521 | 334 | 23 | 69 | 531 | 97 | 595 | 5.41e-13 | 72.0 |
Msa0102750 | MtrunA17_Chr3g0111361 | 40.449 | 89 | 48 | 3 | 255 | 343 | 1 | 84 | 3.17e-11 | 62.0 |
Msa0102750 | MtrunA17_Chr2g0280981 | 38.824 | 85 | 47 | 3 | 259 | 343 | 4 | 83 | 9.00e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102750 | AT1G20080.2 | 71.881 | 537 | 146 | 2 | 1 | 534 | 1 | 535 | 0.0 | 828 |
Msa0102750 | AT1G20080.3 | 71.881 | 537 | 146 | 2 | 1 | 534 | 1 | 535 | 0.0 | 828 |
Msa0102750 | AT1G20080.4 | 71.881 | 537 | 146 | 2 | 1 | 534 | 1 | 535 | 0.0 | 828 |
Msa0102750 | AT1G20080.1 | 71.881 | 537 | 146 | 2 | 1 | 534 | 1 | 535 | 0.0 | 828 |
Msa0102750 | AT1G20080.5 | 71.881 | 537 | 146 | 2 | 1 | 534 | 1 | 535 | 0.0 | 828 |
Msa0102750 | AT2G20990.1 | 69.759 | 539 | 158 | 2 | 1 | 534 | 1 | 539 | 0.0 | 794 |
Msa0102750 | AT2G20990.2 | 66.785 | 563 | 158 | 3 | 1 | 534 | 1 | 563 | 0.0 | 780 |
Msa0102750 | AT2G20990.3 | 65.165 | 577 | 158 | 3 | 1 | 534 | 1 | 577 | 0.0 | 777 |
Msa0102750 | AT5G04220.2 | 52.222 | 540 | 251 | 6 | 1 | 534 | 1 | 539 | 0.0 | 558 |
Msa0102750 | AT5G04220.3 | 54.184 | 478 | 212 | 6 | 63 | 534 | 1 | 477 | 0.0 | 524 |
Msa0102750 | AT2G21010.1 | 61.628 | 258 | 94 | 2 | 278 | 534 | 1 | 254 | 5.81e-112 | 333 |
Msa0102750 | AT5G04220.1 | 50.000 | 316 | 151 | 6 | 225 | 534 | 3 | 317 | 6.44e-98 | 300 |
Msa0102750 | AT1G05500.1 | 30.605 | 562 | 339 | 13 | 11 | 532 | 1 | 551 | 3.02e-80 | 261 |
Msa0102750 | AT1G05500.2 | 32.134 | 417 | 243 | 10 | 146 | 532 | 1 | 407 | 2.12e-58 | 200 |
Msa0102750 | AT3G61050.2 | 32.394 | 355 | 229 | 6 | 60 | 408 | 59 | 408 | 7.48e-55 | 193 |
Msa0102750 | AT3G61050.1 | 32.394 | 355 | 229 | 6 | 60 | 408 | 59 | 408 | 7.48e-55 | 193 |
Msa0102750 | AT2G21040.1 | 62.069 | 87 | 33 | 0 | 401 | 487 | 2 | 88 | 1.60e-34 | 131 |
Msa0102750 | AT3G60950.1 | 26.351 | 296 | 170 | 8 | 73 | 366 | 41 | 290 | 4.31e-21 | 97.4 |
Msa0102750 | AT3G61030.1 | 25.338 | 296 | 166 | 8 | 73 | 366 | 41 | 283 | 5.70e-19 | 90.5 |
Msa0102750 | AT3G14590.1 | 27.027 | 296 | 184 | 11 | 67 | 336 | 23 | 312 | 1.85e-17 | 86.3 |
Msa0102750 | AT3G14590.2 | 27.027 | 296 | 184 | 11 | 67 | 336 | 68 | 357 | 1.87e-17 | 86.3 |
Msa0102750 | AT3G14590.3 | 27.027 | 296 | 184 | 11 | 67 | 336 | 37 | 326 | 2.02e-17 | 86.3 |
Msa0102750 | AT1G48590.4 | 42.105 | 95 | 49 | 4 | 249 | 343 | 1 | 89 | 2.74e-14 | 71.2 |
Msa0102750 | AT1G48590.1 | 42.105 | 95 | 49 | 4 | 249 | 343 | 1 | 89 | 2.74e-14 | 71.2 |
Msa0102750 | AT1G48590.2 | 42.105 | 95 | 49 | 4 | 249 | 343 | 32 | 120 | 3.63e-14 | 72.0 |
Msa0102750 | AT3G14590.5 | 26.199 | 271 | 170 | 10 | 92 | 336 | 5 | 271 | 3.02e-13 | 72.8 |
Msa0102750 | AT2G01540.1 | 40.909 | 88 | 47 | 3 | 256 | 343 | 3 | 85 | 2.06e-12 | 66.2 |
Msa0102750 | AT3G14590.4 | 26.316 | 247 | 155 | 9 | 113 | 336 | 27 | 269 | 7.20e-12 | 68.6 |
Msa0102750 | AT3G17980.1 | 39.130 | 92 | 51 | 3 | 252 | 343 | 10 | 96 | 2.30e-11 | 63.2 |
Msa0102750 | AT1G73580.1 | 41.667 | 96 | 51 | 3 | 255 | 350 | 4 | 94 | 2.40e-11 | 62.8 |
Find 126 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTATCCATAAGGGTATTTC+TGG | 0.176766 | 1_3:+9571508 | None:intergenic |
TACTGACCAATCATTCATTA+TGG | 0.189172 | 1_3:+9568347 | None:intergenic |
GATAACTCATCATCCTTAAA+AGG | 0.195494 | 1_3:+9569287 | None:intergenic |
TTGCAGCCACATGTTGATTT+TGG | 0.196155 | 1_3:-9570570 | Msa0102750:intron |
TGTCTATTCCTGGTCTTTAT+AGG | 0.201515 | 1_3:-9570521 | Msa0102750:CDS |
CTTCAACATCTTCAGCTTCA+TGG | 0.205719 | 1_3:+9569192 | None:intergenic |
TTTGCGCGGCTTATATTTAA+AGG | 0.251485 | 1_3:-9569149 | Msa0102750:CDS |
GGAATTTGTTCAGCAATAAT+AGG | 0.273016 | 1_3:+9571191 | None:intergenic |
TTAAACTCTTCATTCCATTC+TGG | 0.286995 | 1_3:+9569863 | None:intergenic |
TTTGTGGCCTAAGGCCTTAC+AGG | 0.290174 | 1_3:-9570167 | Msa0102750:CDS |
TACCATACCTTGTTCAAATA+AGG | 0.292069 | 1_3:+9571337 | None:intergenic |
AGTACTACTCTGGTTTAGTT+TGG | 0.301538 | 1_3:-9572091 | Msa0102750:five_prime_UTR |
GCTTAGAAAGAAAGATATAA+TGG | 0.304229 | 1_3:-9569972 | Msa0102750:CDS |
TGATGAAAAGGAATTGATTA+TGG | 0.312221 | 1_3:-9570984 | Msa0102750:CDS |
TTTCTTGTTTGCAGCTTGAT+TGG | 0.313508 | 1_3:-9571387 | Msa0102750:intron |
TTAACTGCAACTATAATGTT+AGG | 0.313515 | 1_3:+9570935 | None:intergenic |
GGATCCTACATTTACTCCTT+TGG | 0.316311 | 1_3:-9571566 | Msa0102750:CDS |
TGCTTCCAGAAATACCCTTA+TGG | 0.317531 | 1_3:-9571513 | Msa0102750:CDS |
ATAGTTGCAGTTAAAGCATT+TGG | 0.324968 | 1_3:-9570926 | Msa0102750:CDS |
CATGAGAGACACGTAAATAT+TGG | 0.325285 | 1_3:+9570683 | None:intergenic |
TAATGCTTAATGTTTATGAT+TGG | 0.327754 | 1_3:-9569808 | Msa0102750:CDS |
ATGATTGGTCAGTAGTAAAT+AGG | 0.332208 | 1_3:-9568338 | Msa0102750:three_prime_UTR |
AATTTAAGAGTAAGTAGTTT+TGG | 0.333174 | 1_3:+9569386 | None:intergenic |
GGCCTTACAGGTGCAAATAA+TGG | 0.335538 | 1_3:-9570155 | Msa0102750:CDS |
TGCATAATATATGCAAGATC+TGG | 0.336409 | 1_3:+9568091 | None:intergenic |
GCGCATAATGTTGAAGCCTT+TGG | 0.341358 | 1_3:-9570727 | Msa0102750:CDS |
TTTCATATTAAATTATGATT+TGG | 0.342716 | 1_3:+9568032 | None:intergenic |
TTCTCATTCTCAGGATCATT+AGG | 0.353471 | 1_3:+9569347 | None:intergenic |
TTATGGAATTATCAATGAAA+TGG | 0.362011 | 1_3:-9570967 | Msa0102750:CDS |
ACTGACCAATCATTCATTAT+GGG | 0.371685 | 1_3:+9568348 | None:intergenic |
TTGAGTTTAAGTTTCACATA+AGG | 0.380151 | 1_3:+9569938 | None:intergenic |
AACATAAAGTCTCTCATTGA+TGG | 0.380639 | 1_3:+9568619 | None:intergenic |
TGAGTTTAAGTTTCACATAA+GGG | 0.381669 | 1_3:+9569939 | None:intergenic |
TGGCAATTGTGCAGCATGTA+AGG | 0.397069 | 1_3:-9568697 | Msa0102750:intron |
TGAAATGTTTCACCCCATCT+TGG | 0.402322 | 1_3:+9568662 | None:intergenic |
TCAGGAAATTATAAAAGATC+AGG | 0.404435 | 1_3:-9570203 | Msa0102750:intron |
ACTTCACTTGGATTGTTGAT+TGG | 0.408025 | 1_3:-9571942 | Msa0102750:CDS |
GCAGATGCAATGTCTATTCC+TGG | 0.408163 | 1_3:-9570531 | Msa0102750:CDS |
ATGCATGTAACATGGAAGTT+TGG | 0.411112 | 1_3:-9568288 | Msa0102750:three_prime_UTR |
AATGCTTAATGTTTATGATT+GGG | 0.413882 | 1_3:-9569807 | Msa0102750:CDS |
ATCCATTATTTGCACCTGTA+AGG | 0.414927 | 1_3:+9570153 | None:intergenic |
CTTAGAAAGAAAGATATAAT+GGG | 0.420642 | 1_3:-9569971 | Msa0102750:CDS |
CAACTTCAATATCAATGTCT+AGG | 0.423562 | 1_3:+9572015 | None:intergenic |
CCACTAGCAGGTGTTCCTTC+CGG | 0.429816 | 1_3:+9569236 | None:intergenic |
ATGCAGCAGGCCTAACTTTG+AGG | 0.430649 | 1_3:+9568580 | None:intergenic |
TAATGTTTATGATTGGGAAC+AGG | 0.431633 | 1_3:-9569801 | Msa0102750:intron |
GTTTGGAAAGGCTGAGAAGA+TGG | 0.433941 | 1_3:-9569450 | Msa0102750:CDS |
TAACATACACGGTCATAGTC+TGG | 0.434799 | 1_3:+9571481 | None:intergenic |
CCACGTGACTTCTCATTCTC+AGG | 0.435478 | 1_3:+9569338 | None:intergenic |
TGAATTTGAAGAACTTAACT+TGG | 0.437517 | 1_3:-9571147 | Msa0102750:CDS |
TGGATTGCGAGCAACAGTTC+AGG | 0.437684 | 1_3:-9570906 | Msa0102750:intron |
GTGTTACCTTTGGATGCAGC+AGG | 0.438661 | 1_3:+9568567 | None:intergenic |
GAATTATCAATGAAATGGGC+TGG | 0.454207 | 1_3:-9570962 | Msa0102750:CDS |
TTCACATGAAGAATTCCAAC+TGG | 0.456262 | 1_3:+9570013 | None:intergenic |
AGTGTATAGCACTGATGAAA+AGG | 0.456613 | 1_3:-9570996 | Msa0102750:CDS |
TTTGGTGTAAGCTCTTTCAA+TGG | 0.460667 | 1_3:+9569413 | None:intergenic |
TTAAATATAAGCCGCGCAAA+CGG | 0.466177 | 1_3:+9569152 | None:intergenic |
GCATAATATATGCAAGATCT+GGG | 0.470763 | 1_3:+9568092 | None:intergenic |
CATGAAGCTGAAGATGTTGA+AGG | 0.474251 | 1_3:-9569191 | Msa0102750:CDS |
TTTGGAATTGGAACTTCACT+TGG | 0.478660 | 1_3:-9571954 | Msa0102750:CDS |
ATAAATTTGTTGAGTGTATG+TGG | 0.489433 | 1_3:-9571360 | Msa0102750:CDS |
TAATTTAATATGAAAACTCC+AGG | 0.491685 | 1_3:-9568024 | Msa0102750:three_prime_UTR |
TGGAGCTTTGTTTGAAAATG+TGG | 0.497538 | 1_3:-9568268 | Msa0102750:three_prime_UTR |
CTATGTATACCTTGAAAAGT+TGG | 0.499556 | 1_3:+9571113 | None:intergenic |
TATGGAATTATCAATGAAAT+GGG | 0.501349 | 1_3:-9570966 | Msa0102750:CDS |
TCAGGAAACTCTTGGATATG+TGG | 0.502591 | 1_3:-9568474 | Msa0102750:intron |
AGAACCCCATAATGAATGAT+TGG | 0.503884 | 1_3:-9568353 | Msa0102750:exon |
AACTTCAATATCAATGTCTA+GGG | 0.503960 | 1_3:+9572016 | None:intergenic |
TTACGTGTCTCTCATGGAAA+AGG | 0.505863 | 1_3:-9570676 | Msa0102750:intron |
AAACCTTCTTAATTAAACAT+AGG | 0.507037 | 1_3:+9567974 | None:intergenic |
ACATAAAGTCTCTCATTGAT+GGG | 0.508044 | 1_3:+9568620 | None:intergenic |
ACTTAGTTAGTACTAGTAGT+AGG | 0.508370 | 1_3:-9572041 | Msa0102750:five_prime_UTR |
ATAAGTGCATCCTCAAAGTT+AGG | 0.515045 | 1_3:-9568590 | Msa0102750:CDS |
ATTTGCACCTGTAAGGCCTT+AGG | 0.516595 | 1_3:+9570160 | None:intergenic |
CAATATTTACGTGTCTCTCA+TGG | 0.518490 | 1_3:-9570682 | Msa0102750:CDS |
TGGTCTTTATAGGATTGTCC+AGG | 0.532727 | 1_3:-9570511 | Msa0102750:intron |
AATTATCAATGAAATGGGCT+GGG | 0.534000 | 1_3:-9570961 | Msa0102750:CDS |
AACATTTCAATTTACGCTAG+AGG | 0.535589 | 1_3:-9568648 | Msa0102750:CDS |
GTGAGCTTAACTCAGTTGGT+AGG | 0.537253 | 1_3:+9568063 | None:intergenic |
AACAATGATACATACTGTGA+TGG | 0.538427 | 1_3:+9570130 | None:intergenic |
AGATTCAAATTGAGCTTCAG+TGG | 0.538926 | 1_3:-9568376 | Msa0102750:CDS |
CTTTCAATCAATAGATGTCA+AGG | 0.552952 | 1_3:-9571901 | Msa0102750:intron |
ACAAGAACTTGAATCCAGAA+TGG | 0.555590 | 1_3:-9569877 | Msa0102750:CDS |
TTTGGAAAGGCTGAGAAGAT+GGG | 0.557070 | 1_3:-9569449 | Msa0102750:CDS |
AACTTCCATGTTACATGCAT+AGG | 0.557803 | 1_3:+9568291 | None:intergenic |
TTGGCGAAACAAGGAAAACT+AGG | 0.559504 | 1_3:+9570702 | None:intergenic |
CCTCGTGAGCTTAACTCAGT+TGG | 0.563249 | 1_3:+9568059 | None:intergenic |
GAATTCAGAAGACACAGAAA+AGG | 0.566484 | 1_3:-9569261 | Msa0102750:CDS |
TTAGCTTCTTGCTCAACCAA+AGG | 0.569279 | 1_3:+9571550 | None:intergenic |
AAAAGCAAACCACCACTAGC+AGG | 0.570645 | 1_3:+9569224 | None:intergenic |
TCAACCAAAGGAGTAAATGT+AGG | 0.571099 | 1_3:+9571562 | None:intergenic |
AGAAGACACAGAAAAGGCTC+CGG | 0.576031 | 1_3:-9569255 | Msa0102750:CDS |
GGTGGTTAACTAGTTTGGAA+AGG | 0.576754 | 1_3:-9569462 | Msa0102750:intron |
GAATTTGAAGAACTTAACTT+GGG | 0.579840 | 1_3:-9571146 | Msa0102750:CDS |
TGAGCTTAACTCAGTTGGTA+GGG | 0.580072 | 1_3:+9568064 | None:intergenic |
CAAGGAAAACTAGGAACCAA+AGG | 0.582613 | 1_3:+9570711 | None:intergenic |
CTGACCAATCATTCATTATG+GGG | 0.585607 | 1_3:+9568349 | None:intergenic |
TGTATACCTTGAAAAGTTGG+TGG | 0.590094 | 1_3:+9571116 | None:intergenic |
GTTAGGCCTGCTGCATCCAA+AGG | 0.591098 | 1_3:-9568573 | Msa0102750:intron |
CCACACAAGAAGTACTACTC+TGG | 0.593938 | 1_3:-9572101 | Msa0102750:five_prime_UTR |
CCAGAGTAGTACTTCTTGTG+TGG | 0.597948 | 1_3:+9572101 | None:intergenic |
GTCACGTGGAGAGCTTATTG+TGG | 0.600730 | 1_3:-9569324 | Msa0102750:CDS |
TTTCTCCTAAAATTTGACCC+TGG | 0.604163 | 1_3:+9568006 | None:intergenic |
TTTAATCCAAAATCAACATG+TGG | 0.608108 | 1_3:+9570564 | None:intergenic |
GACACAGAAAAGGCTCCGGA+AGG | 0.610551 | 1_3:-9569251 | Msa0102750:CDS |
ACGTAAATATTGGCGAAACA+AGG | 0.611735 | 1_3:+9570693 | None:intergenic |
ACCACACAAATCCGTTTGCG+CGG | 0.615343 | 1_3:-9569163 | Msa0102750:CDS |
CATAAAGTCTCTCATTGATG+GGG | 0.616421 | 1_3:+9568621 | None:intergenic |
CCGGAAGGAACACCTGCTAG+TGG | 0.626646 | 1_3:-9569236 | Msa0102750:CDS |
ATAAAGTCTCTCATTGATGG+GGG | 0.628586 | 1_3:+9568622 | None:intergenic |
GCGGCTTATATTTAAAGGCG+AGG | 0.630495 | 1_3:-9569144 | Msa0102750:CDS |
GTACTCCTATGCATGTAACA+TGG | 0.631222 | 1_3:-9568296 | Msa0102750:three_prime_UTR |
CCAACTGAGTTAAGCTCACG+AGG | 0.635206 | 1_3:-9568059 | Msa0102750:three_prime_UTR |
AGAAAGAAAGATATAATGGG+AGG | 0.645260 | 1_3:-9569968 | Msa0102750:CDS |
TATGTGGCCTTATTTGAACA+AGG | 0.651291 | 1_3:-9571344 | Msa0102750:intron |
CCTGAGAATGAGAAGTCACG+TGG | 0.651349 | 1_3:-9569338 | Msa0102750:CDS |
GAAGGAACACCTGCTAGTGG+TGG | 0.656477 | 1_3:-9569233 | Msa0102750:CDS |
ATGGAATGAAGAGTTTAATG+TGG | 0.658297 | 1_3:-9569858 | Msa0102750:CDS |
TGGACAATCCTATAAAGACC+AGG | 0.668034 | 1_3:+9570513 | None:intergenic |
ATAGGAGTACAAACTTACAA+TGG | 0.668584 | 1_3:+9568309 | None:intergenic |
GCCGCGCAAACGGATTTGTG+TGG | 0.677878 | 1_3:+9569162 | None:intergenic |
AATTTAATATGAAAACTCCA+GGG | 0.678555 | 1_3:-9568023 | Msa0102750:three_prime_UTR |
AAAGGCTTCAACATTATGCG+CGG | 0.685990 | 1_3:+9570729 | None:intergenic |
CATAATATATGCAAGATCTG+GGG | 0.688869 | 1_3:+9568093 | None:intergenic |
TAAAGTCTCTCATTGATGGG+GGG | 0.690358 | 1_3:+9568623 | None:intergenic |
AAATTAGAAAAGAAAAGACA+AGG | 0.696021 | 1_3:+9572158 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAAAAAAACTAAAATATA+AGG | + | chr1_3:9568497-9568516 | None:intergenic | 10.0% |
!! | TTCTTGATATATTAAAAATA+TGG | - | chr1_3:9568513-9568532 | Msa0102750:intron | 10.0% |
!! | AATAATAATAATAACATACA+CGG | + | chr1_3:9568654-9568673 | None:intergenic | 10.0% |
!!! | ATTGATTTTCAAAATTTTAT+TGG | - | chr1_3:9568819-9568838 | Msa0102750:intron | 10.0% |
!! | TATAACATAACATTATAATT+AGG | - | chr1_3:9570031-9570050 | Msa0102750:intron | 10.0% |
!! | TTTCATATTAAATTATGATT+TGG | + | chr1_3:9572092-9572111 | None:intergenic | 10.0% |
!! | TCAAATATAAACAAAAAAAG+CGG | - | chr1_3:9569251-9569270 | Msa0102750:CDS | 15.0% |
!! | TTATGTTATAAACTCATAAA+GGG | + | chr1_3:9570021-9570040 | None:intergenic | 15.0% |
!!! | TCAAAATTTTTAAAAAGTTG+AGG | - | chr1_3:9570484-9570503 | Msa0102750:intron | 15.0% |
!! | TAATATATAGAAGAATTAGA+TGG | + | chr1_3:9571066-9571085 | None:intergenic | 15.0% |
!! | TAAAGTAAGTATAGATTAAA+AGG | + | chr1_3:9571317-9571336 | None:intergenic | 15.0% |
!!! | TTCCAAATCATAATTTTTTT+TGG | - | chr1_3:9571990-9572009 | Msa0102750:CDS | 15.0% |
!!! | ATAAATTTGTTTTGAATGAA+TGG | + | chr1_3:9572181-9572200 | None:intergenic | 15.0% |
!! | AAATTAGAAAAGAAAAGACA+AGG | + | chr1_3:9567966-9567985 | None:intergenic | 20.0% |
!!! | AACTATACTACTTTTTTAGA+GGG | + | chr1_3:9568701-9568720 | None:intergenic | 20.0% |
!! | GTTGATCCAAATATATAATA+TGG | - | chr1_3:9569089-9569108 | Msa0102750:intron | 20.0% |
!! | TTATGGAATTATCAATGAAA+TGG | - | chr1_3:9569154-9569173 | Msa0102750:CDS | 20.0% |
!! | TATGGAATTATCAATGAAAT+GGG | - | chr1_3:9569155-9569174 | Msa0102750:CDS | 20.0% |
!!! | TTTTTGTTTATATTTGAGTC+CGG | + | chr1_3:9569248-9569267 | None:intergenic | 20.0% |
!!! | TTCATTTTCTGTTGTTAAAA+AGG | + | chr1_3:9569305-9569324 | None:intergenic | 20.0% |
!! | CAAGAATAATATTAATGACA+TGG | + | chr1_3:9569656-9569675 | None:intergenic | 20.0% |
!! | TACAAAAAAGATTTAGTGAT+CGG | - | chr1_3:9569682-9569701 | Msa0102750:intron | 20.0% |
!!! | TTTAGCGATATTTTTCAAAT+CGG | - | chr1_3:9569754-9569773 | Msa0102750:intron | 20.0% |
!! | GTTATGTTATAAACTCATAA+AGG | + | chr1_3:9570022-9570041 | None:intergenic | 20.0% |
!! | TAATTAGGTGTTAATTAGAT+TGG | - | chr1_3:9570046-9570065 | Msa0102750:intron | 20.0% |
!! | CTTAGAAAGAAAGATATAAT+GGG | - | chr1_3:9570150-9570169 | Msa0102750:CDS | 20.0% |
!! | TAATGCTTAATGTTTATGAT+TGG | - | chr1_3:9570313-9570332 | Msa0102750:intron | 20.0% |
!! | AATGCTTAATGTTTATGATT+GGG | - | chr1_3:9570314-9570333 | Msa0102750:intron | 20.0% |
!!! | AAAACATTTAAAATCTCTTC+TGG | + | chr1_3:9570455-9570474 | None:intergenic | 20.0% |
!!! | GAAGAGATTTTAAATGTTTT+TGG | - | chr1_3:9570455-9570474 | Msa0102750:intron | 20.0% |
!!! | AATTTAAGAGTAAGTAGTTT+TGG | + | chr1_3:9570738-9570757 | None:intergenic | 20.0% |
!! | TTAATCTATACTTACTTTAG+AGG | - | chr1_3:9571318-9571337 | Msa0102750:intron | 20.0% |
!!! | ATACATAGTTTTATGTCTTA+TGG | - | chr1_3:9571590-9571609 | Msa0102750:intron | 20.0% |
!!! | AATTTGAATCTTTCCATTTT+TGG | + | chr1_3:9571736-9571755 | None:intergenic | 20.0% |
!! | TACTCATGAAAAAAGATAAA+AGG | - | chr1_3:9571910-9571929 | Msa0102750:CDS | 20.0% |
!! | CACCAAAAAAAATTATGATT+TGG | + | chr1_3:9571995-9572014 | None:intergenic | 20.0% |
!!! | ATCATAATTTTTTTTGGTGT+CGG | - | chr1_3:9571996-9572015 | Msa0102750:exon | 20.0% |
!! | TAATTTAATATGAAAACTCC+AGG | - | chr1_3:9572097-9572116 | Msa0102750:five_prime_UTR | 20.0% |
!! | AATTTAATATGAAAACTCCA+GGG | - | chr1_3:9572098-9572117 | Msa0102750:five_prime_UTR | 20.0% |
!! | TTACCTATGTTTAATTAAGA+AGG | - | chr1_3:9572144-9572163 | Msa0102750:five_prime_UTR | 20.0% |
!! | AAACCTTCTTAATTAAACAT+AGG | + | chr1_3:9572150-9572169 | None:intergenic | 20.0% |
!! | TATGTTTAATTAAGAAGGTT+TGG | - | chr1_3:9572149-9572168 | Msa0102750:five_prime_UTR | 20.0% |
! | AACTTCAATATCAATGTCTA+GGG | + | chr1_3:9568108-9568127 | None:intergenic | 25.0% |
!!! | AGTACTATAGCTAGTTTTTT+AGG | - | chr1_3:9568143-9568162 | Msa0102750:three_prime_UTR | 25.0% |
!!! | ATAGCTAGTTTTTTAGGATT+TGG | - | chr1_3:9568149-9568168 | Msa0102750:three_prime_UTR | 25.0% |
!!! | AGTTTTTTAGGATTTGGAAT+TGG | - | chr1_3:9568155-9568174 | Msa0102750:three_prime_UTR | 25.0% |
! | TAAAGTTGTGATCTGTAAAA+AGG | - | chr1_3:9568305-9568324 | Msa0102750:three_prime_UTR | 25.0% |
!!! | TCTGGATTTTTTATCCATAA+GGG | + | chr1_3:9568625-9568644 | None:intergenic | 25.0% |
!!! | CAACTATACTACTTTTTTAG+AGG | + | chr1_3:9568702-9568721 | None:intergenic | 25.0% |
!!! | ATAAATTTGTTGAGTGTATG+TGG | - | chr1_3:9568761-9568780 | Msa0102750:intron | 25.0% |
!! | TATGGTTAGTACAACTATTT+TGG | - | chr1_3:9568858-9568877 | Msa0102750:intron | 25.0% |
!!! | TTTTGGTTGAATGTTGTTAT+AGG | - | chr1_3:9568875-9568894 | Msa0102750:intron | 25.0% |
!! | ACTGAATCAATTTTGTACTT+TGG | + | chr1_3:9568954-9568973 | None:intergenic | 25.0% |
! | TGAATTTGAAGAACTTAACT+TGG | - | chr1_3:9568974-9568993 | Msa0102750:intron | 25.0% |
! | GAATTTGAAGAACTTAACTT+GGG | - | chr1_3:9568975-9568994 | Msa0102750:intron | 25.0% |
! | CTGCAACCATATTATATATT+TGG | + | chr1_3:9569098-9569117 | None:intergenic | 25.0% |
! | CAAATATATAATATGGTTGC+AGG | - | chr1_3:9569096-9569115 | Msa0102750:intron | 25.0% |
! | TGATGAAAAGGAATTGATTA+TGG | - | chr1_3:9569137-9569156 | Msa0102750:CDS | 25.0% |
! | TTAACTGCAACTATAATGTT+AGG | + | chr1_3:9569189-9569208 | None:intergenic | 25.0% |
!! | TATATGCTTTAAATGATTGC+AGG | - | chr1_3:9569343-9569362 | Msa0102750:CDS | 25.0% |
! | TTTAATCCAAAATCAACATG+TGG | + | chr1_3:9569560-9569579 | None:intergenic | 25.0% |
!! | GATTTTGGATTAAAACTACT+TGG | - | chr1_3:9569566-9569585 | Msa0102750:intron | 25.0% |
! | ATAGACCAAAATTGACAAAT+TGG | - | chr1_3:9569708-9569727 | Msa0102750:intron | 25.0% |
!! | AGTTGATATAGAAACTGATT+CGG | - | chr1_3:9569794-9569813 | Msa0102750:intron | 25.0% |
! | TCAGGAAATTATAAAAGATC+AGG | - | chr1_3:9569918-9569937 | Msa0102750:CDS | 25.0% |
!!! | TTAGATTGGCTAATTTTACT+TGG | - | chr1_3:9570060-9570079 | Msa0102750:intron | 25.0% |
!!! | TTTTACTTGGTTAATTTGTC+AGG | - | chr1_3:9570073-9570092 | Msa0102750:intron | 25.0% |
!!! | TTTACTTGGTTAATTTGTCA+GGG | - | chr1_3:9570074-9570093 | Msa0102750:intron | 25.0% |
! | GCTTAGAAAGAAAGATATAA+TGG | - | chr1_3:9570149-9570168 | Msa0102750:CDS | 25.0% |
!! | TGAGTTTAAGTTTCACATAA+GGG | + | chr1_3:9570185-9570204 | None:intergenic | 25.0% |
!! | TTGAGTTTAAGTTTCACATA+AGG | + | chr1_3:9570186-9570205 | None:intergenic | 25.0% |
! | ATGCAAATTTAGACTAAAGT+TGG | - | chr1_3:9570359-9570378 | Msa0102750:intron | 25.0% |
!!! | GTGAATGTTTTGGTTAAAAA+TGG | - | chr1_3:9570427-9570446 | Msa0102750:intron | 25.0% |
!! | AAGTTTTCAAAATTGCAAAC+TGG | + | chr1_3:9570512-9570531 | None:intergenic | 25.0% |
!! | GAAATTTAAAATTTGCAGAC+TGG | + | chr1_3:9570542-9570561 | None:intergenic | 25.0% |
! | ATTGCTTGATTAACATTCTA+AGG | + | chr1_3:9570577-9570596 | None:intergenic | 25.0% |
! | CATGCTTGAAAATATGTTAT+AGG | + | chr1_3:9570624-9570643 | None:intergenic | 25.0% |
!! | AGTTATGTACAAACCTTTTA+AGG | - | chr1_3:9570821-9570840 | Msa0102750:intron | 25.0% |
! | GATCTGATAAAATAATACCT+TGG | + | chr1_3:9571012-9571031 | None:intergenic | 25.0% |
! | GAAAGTCAACAAATCATAAT+CGG | + | chr1_3:9571093-9571112 | None:intergenic | 25.0% |
!! | TCTAAAATATGTAACTGCTT+TGG | - | chr1_3:9571206-9571225 | Msa0102750:CDS | 25.0% |
! | AAAAGGAAGAAATCAATAGT+TGG | + | chr1_3:9571300-9571319 | None:intergenic | 25.0% |
! | AATGGTTAAATCTCATTGAA+AGG | + | chr1_3:9571398-9571417 | None:intergenic | 25.0% |
!!! | GAGATTTAACCATTGTTTTA+TGG | - | chr1_3:9571404-9571423 | Msa0102750:intron | 25.0% |
!!! | TTAATACCTTGTTTTGAATC+AGG | - | chr1_3:9571629-9571648 | Msa0102750:intron | 25.0% |
!!! | TCATAATTTTTTTTGGTGTC+GGG | - | chr1_3:9571997-9572016 | Msa0102750:exon | 25.0% |
ACTTAGTTAGTACTAGTAGT+AGG | - | chr1_3:9568080-9568099 | Msa0102750:three_prime_UTR | 30.0% | |
CAACTTCAATATCAATGTCT+AGG | + | chr1_3:9568109-9568128 | None:intergenic | 30.0% | |
CTTTCAATCAATAGATGTCA+AGG | - | chr1_3:9568220-9568239 | Msa0102750:three_prime_UTR | 30.0% | |
!! | TTTATCCATAAGGGTATTTC+TGG | + | chr1_3:9568616-9568635 | None:intergenic | 30.0% |
!!! | GTCTGGATTTTTTATCCATA+AGG | + | chr1_3:9568626-9568645 | None:intergenic | 30.0% |
TACCATACCTTGTTCAAATA+AGG | + | chr1_3:9568787-9568806 | None:intergenic | 30.0% | |
! | GGAATTTGTTCAGCAATAAT+AGG | + | chr1_3:9568933-9568952 | None:intergenic | 30.0% |
CTATGTATACCTTGAAAAGT+TGG | + | chr1_3:9569011-9569030 | None:intergenic | 30.0% | |
! | AATTATCAATGAAATGGGCT+GGG | - | chr1_3:9569160-9569179 | Msa0102750:CDS | 30.0% |
! | ATAGTTGCAGTTAAAGCATT+TGG | - | chr1_3:9569195-9569214 | Msa0102750:CDS | 30.0% |
!! | TTAAAAAGGTGCATCGATTA+CGG | + | chr1_3:9569291-9569310 | None:intergenic | 30.0% |
CATTTGTTCATCACAATGTT+AGG | + | chr1_3:9569496-9569515 | None:intergenic | 30.0% | |
! | AGTGACCAATTTGTCAATTT+TGG | + | chr1_3:9569716-9569735 | None:intergenic | 30.0% |
AGGTTGCAAAAATGTATTTG+TGG | - | chr1_3:9569938-9569957 | Msa0102750:CDS | 30.0% | |
AAAAATGTATTTGTGGCCTA+AGG | - | chr1_3:9569945-9569964 | Msa0102750:CDS | 30.0% | |
AACAATGATACATACTGTGA+TGG | + | chr1_3:9569994-9570013 | None:intergenic | 30.0% | |
!!! | AATTCCAACTGGTTTTTTCA+TGG | + | chr1_3:9570100-9570119 | None:intergenic | 30.0% |
! | AGAAAGAAAGATATAATGGG+AGG | - | chr1_3:9570153-9570172 | Msa0102750:CDS | 30.0% |
TTAAACTCTTCATTCCATTC+TGG | + | chr1_3:9570261-9570280 | None:intergenic | 30.0% | |
ATGGAATGAAGAGTTTAATG+TGG | - | chr1_3:9570263-9570282 | Msa0102750:intron | 30.0% | |
!!! | AGCATTAAGTTTTGAGATTC+TGG | + | chr1_3:9570300-9570319 | None:intergenic | 30.0% |
TAATGTTTATGATTGGGAAC+AGG | - | chr1_3:9570320-9570339 | Msa0102750:intron | 30.0% | |
! | AGCATGTTACTTATTTCCTA+TGG | - | chr1_3:9570638-9570657 | Msa0102750:intron | 30.0% |
! | ATGTTACTTATTTCCTATGG+TGG | - | chr1_3:9570641-9570660 | Msa0102750:intron | 30.0% |
!!! | GTAAGTAGTTTTGGTTCATT+TGG | + | chr1_3:9570729-9570748 | None:intergenic | 30.0% |
GATAACTCATCATCCTTAAA+AGG | + | chr1_3:9570837-9570856 | None:intergenic | 30.0% | |
ACTTTCGATTTATTGCTATC+AGG | - | chr1_3:9571107-9571126 | Msa0102750:intron | 30.0% | |
ACTAAGAAATAGATGACAAG+TGG | + | chr1_3:9571138-9571157 | None:intergenic | 30.0% | |
!! | TCAAACAAACTCTAAAACAC+CGG | + | chr1_3:9571364-9571383 | None:intergenic | 30.0% |
GAAAAATAGAGATCCAAGAT+GGG | - | chr1_3:9571446-9571465 | Msa0102750:intron | 30.0% | |
AAAAATAGAGATCCAAGATG+GGG | - | chr1_3:9571447-9571466 | Msa0102750:intron | 30.0% | |
AACATTTCAATTTACGCTAG+AGG | - | chr1_3:9571473-9571492 | Msa0102750:intron | 30.0% | |
ACATAAAGTCTCTCATTGAT+GGG | + | chr1_3:9571504-9571523 | None:intergenic | 30.0% | |
AACATAAAGTCTCTCATTGA+TGG | + | chr1_3:9571505-9571524 | None:intergenic | 30.0% | |
TTGATCTTTAGTGTTACCTT+TGG | + | chr1_3:9571567-9571586 | None:intergenic | 30.0% | |
!! | CATCTTATTGACTCCAAAAA+TGG | - | chr1_3:9571720-9571739 | Msa0102750:intron | 30.0% |
ACTGACCAATCATTCATTAT+GGG | + | chr1_3:9571776-9571795 | None:intergenic | 30.0% | |
TACTGACCAATCATTCATTA+TGG | + | chr1_3:9571777-9571796 | None:intergenic | 30.0% | |
! | ATGATTGGTCAGTAGTAAAT+AGG | - | chr1_3:9571783-9571802 | Msa0102750:intron | 30.0% |
! | ATAGGAGTACAAACTTACAA+TGG | + | chr1_3:9571815-9571834 | None:intergenic | 30.0% |
!!! | CATAATTTTTTTTGGTGTCG+GGG | - | chr1_3:9571998-9572017 | Msa0102750:exon | 30.0% |
CATAATATATGCAAGATCTG+GGG | + | chr1_3:9572031-9572050 | None:intergenic | 30.0% | |
GCATAATATATGCAAGATCT+GGG | + | chr1_3:9572032-9572051 | None:intergenic | 30.0% | |
TGCATAATATATGCAAGATC+TGG | + | chr1_3:9572033-9572052 | None:intergenic | 30.0% | |
! | AGTACTACTCTGGTTTAGTT+TGG | - | chr1_3:9568030-9568049 | Msa0102750:three_prime_UTR | 35.0% |
! | TTTGGAATTGGAACTTCACT+TGG | - | chr1_3:9568167-9568186 | Msa0102750:three_prime_UTR | 35.0% |
ACTTCACTTGGATTGTTGAT+TGG | - | chr1_3:9568179-9568198 | Msa0102750:three_prime_UTR | 35.0% | |
!! | GGCATGTTTGTTATGATTTC+AGG | - | chr1_3:9568534-9568553 | Msa0102750:intron | 35.0% |
TCAACCAAAGGAGTAAATGT+AGG | + | chr1_3:9568562-9568581 | None:intergenic | 35.0% | |
! | TTTCTTGTTTGCAGCTTGAT+TGG | - | chr1_3:9568734-9568753 | Msa0102750:intron | 35.0% |
!! | TATGTGGCCTTATTTGAACA+AGG | - | chr1_3:9568777-9568796 | Msa0102750:intron | 35.0% |
! | GGCATCTATGAGATTTTGTA+TGG | - | chr1_3:9568840-9568859 | Msa0102750:intron | 35.0% |
TGTATACCTTGAAAAGTTGG+TGG | + | chr1_3:9569008-9569027 | None:intergenic | 35.0% | |
!! | AGTGTATAGCACTGATGAAA+AGG | - | chr1_3:9569125-9569144 | Msa0102750:intron | 35.0% |
GAATTATCAATGAAATGGGC+TGG | - | chr1_3:9569159-9569178 | Msa0102750:CDS | 35.0% | |
AAAAAAGCGGCCATATTTAG+CGG | - | chr1_3:9569264-9569283 | Msa0102750:CDS | 35.0% | |
ACGTAAATATTGGCGAAACA+AGG | + | chr1_3:9569431-9569450 | None:intergenic | 35.0% | |
CATGAGAGACACGTAAATAT+TGG | + | chr1_3:9569441-9569460 | None:intergenic | 35.0% | |
CAATATTTACGTGTCTCTCA+TGG | - | chr1_3:9569439-9569458 | Msa0102750:CDS | 35.0% | |
! | TGTCTATTCCTGGTCTTTAT+AGG | - | chr1_3:9569600-9569619 | Msa0102750:intron | 35.0% |
!! | ATATCCTCTCACTTGTTTTC+AGG | - | chr1_3:9569900-9569919 | Msa0102750:CDS | 35.0% |
ATTTCCTGAAAACAAGTGAG+AGG | + | chr1_3:9569907-9569926 | None:intergenic | 35.0% | |
ATCCATTATTTGCACCTGTA+AGG | + | chr1_3:9569971-9569990 | None:intergenic | 35.0% | |
TTCACATGAAGAATTCCAAC+TGG | + | chr1_3:9570111-9570130 | None:intergenic | 35.0% | |
ACAAGAACTTGAATCCAGAA+TGG | - | chr1_3:9570244-9570263 | Msa0102750:intron | 35.0% | |
TTGGATGTAAGATTATCAGC+AGG | - | chr1_3:9570378-9570397 | Msa0102750:intron | 35.0% | |
!!! | GGAAACTTTTAGAGTGTGTT+TGG | - | chr1_3:9570399-9570418 | Msa0102750:intron | 35.0% |
!!! | ACTTTTAGAGTGTGTTTGGA+TGG | - | chr1_3:9570403-9570422 | Msa0102750:intron | 35.0% |
!! | TAACATTCTAAGGCTGTGTT+TGG | + | chr1_3:9570567-9570586 | None:intergenic | 35.0% |
! | TTTGGTGTAAGCTCTTTCAA+TGG | + | chr1_3:9570711-9570730 | None:intergenic | 35.0% |
TTCTCATTCTCAGGATCATT+AGG | + | chr1_3:9570777-9570796 | None:intergenic | 35.0% | |
GAATTCAGAAGACACAGAAA+AGG | - | chr1_3:9570860-9570879 | Msa0102750:intron | 35.0% | |
TTAAATATAAGCCGCGCAAA+CGG | + | chr1_3:9570972-9570991 | None:intergenic | 35.0% | |
TTTGCGCGGCTTATATTTAA+AGG | - | chr1_3:9570972-9570991 | Msa0102750:CDS | 35.0% | |
! | TAACTGCTTTGGATCATTGA+TGG | - | chr1_3:9571217-9571236 | Msa0102750:CDS | 35.0% |
TAGATACCAGTTTACTTGTG+CGG | - | chr1_3:9571252-9571271 | Msa0102750:intron | 35.0% | |
GCACAATTGCCATAAAACAA+TGG | + | chr1_3:9571416-9571435 | None:intergenic | 35.0% | |
GGAAAAATAGAGATCCAAGA+TGG | - | chr1_3:9571445-9571464 | Msa0102750:intron | 35.0% | |
ATAAAGTCTCTCATTGATGG+GGG | + | chr1_3:9571502-9571521 | None:intergenic | 35.0% | |
CATAAAGTCTCTCATTGATG+GGG | + | chr1_3:9571503-9571522 | None:intergenic | 35.0% | |
ATAAGTGCATCCTCAAAGTT+AGG | - | chr1_3:9571531-9571550 | Msa0102750:CDS | 35.0% | |
GAGTTTCCTGATTCAAAACA+AGG | + | chr1_3:9571638-9571657 | None:intergenic | 35.0% | |
!! | GTTTTGAATCAGGAAACTCT+TGG | - | chr1_3:9571639-9571658 | Msa0102750:intron | 35.0% |
AGATTCAAATTGAGCTTCAG+TGG | - | chr1_3:9571745-9571764 | Msa0102750:intron | 35.0% | |
AGAACCCCATAATGAATGAT+TGG | - | chr1_3:9571768-9571787 | Msa0102750:intron | 35.0% | |
CTGACCAATCATTCATTATG+GGG | + | chr1_3:9571775-9571794 | None:intergenic | 35.0% | |
AACTTCCATGTTACATGCAT+AGG | + | chr1_3:9571833-9571852 | None:intergenic | 35.0% | |
ATGCATGTAACATGGAAGTT+TGG | - | chr1_3:9571833-9571852 | Msa0102750:intron | 35.0% | |
!! | TGGAGCTTTGTTTGAAAATG+TGG | - | chr1_3:9571853-9571872 | Msa0102750:intron | 35.0% |
! | AAACTCCAGGGTCAAATTTT+AGG | - | chr1_3:9572110-9572129 | Msa0102750:five_prime_UTR | 35.0% |
TTTCTCCTAAAATTTGACCC+TGG | + | chr1_3:9572118-9572137 | None:intergenic | 35.0% | |
GGATCCTACATTTACTCCTT+TGG | - | chr1_3:9568555-9568574 | Msa0102750:intron | 40.0% | |
TTAGCTTCTTGCTCAACCAA+AGG | + | chr1_3:9568574-9568593 | None:intergenic | 40.0% | |
TGCTTCCAGAAATACCCTTA+TGG | - | chr1_3:9568608-9568627 | Msa0102750:CDS | 40.0% | |
TAACATACACGGTCATAGTC+TGG | + | chr1_3:9568643-9568662 | None:intergenic | 40.0% | |
!! | GGCCTTATTTGAACAAGGTA+TGG | - | chr1_3:9568782-9568801 | Msa0102750:intron | 40.0% |
CAACAGTTCAGGTATTTCTC+CGG | - | chr1_3:9569226-9569245 | Msa0102750:CDS | 40.0% | |
AAAGGCTTCAACATTATGCG+CGG | + | chr1_3:9569395-9569414 | None:intergenic | 40.0% | |
CAAGGAAAACTAGGAACCAA+AGG | + | chr1_3:9569413-9569432 | None:intergenic | 40.0% | |
TTGGCGAAACAAGGAAAACT+AGG | + | chr1_3:9569422-9569441 | None:intergenic | 40.0% | |
TTACGTGTCTCTCATGGAAA+AGG | - | chr1_3:9569445-9569464 | Msa0102750:CDS | 40.0% | |
!!! | TTGCAGCCACATGTTGATTT+TGG | - | chr1_3:9569551-9569570 | Msa0102750:intron | 40.0% |
TGGACAATCCTATAAAGACC+AGG | + | chr1_3:9569611-9569630 | None:intergenic | 40.0% | |
TGGTCTTTATAGGATTGTCC+AGG | - | chr1_3:9569610-9569629 | Msa0102750:intron | 40.0% | |
GTGCTATAGTATATGCTACC+TGG | + | chr1_3:9569631-9569650 | None:intergenic | 40.0% | |
! | TTTGGATGGCGTGAATGTTT+TGG | - | chr1_3:9570417-9570436 | Msa0102750:intron | 40.0% |
CCAAACTAGTTAACCACCAT+AGG | + | chr1_3:9570657-9570676 | None:intergenic | 40.0% | |
CCTATGGTGGTTAACTAGTT+TGG | - | chr1_3:9570654-9570673 | Msa0102750:intron | 40.0% | |
! | GGTGGTTAACTAGTTTGGAA+AGG | - | chr1_3:9570659-9570678 | Msa0102750:intron | 40.0% |
TTTGGAAAGGCTGAGAAGAT+GGG | - | chr1_3:9570672-9570691 | Msa0102750:intron | 40.0% | |
CTTCAACATCTTCAGCTTCA+TGG | + | chr1_3:9570932-9570951 | None:intergenic | 40.0% | |
CATGAAGCTGAAGATGTTGA+AGG | - | chr1_3:9570930-9570949 | Msa0102750:CDS | 40.0% | |
TGAAATGTTTCACCCCATCT+TGG | + | chr1_3:9571462-9571481 | None:intergenic | 40.0% | |
TAAAGTCTCTCATTGATGGG+GGG | + | chr1_3:9571501-9571520 | None:intergenic | 40.0% | |
TCAGGAAACTCTTGGATATG+TGG | - | chr1_3:9571647-9571666 | Msa0102750:intron | 40.0% | |
GTACTCCTATGCATGTAACA+TGG | - | chr1_3:9571825-9571844 | Msa0102750:intron | 40.0% | |
! | TGAGCTTAACTCAGTTGGTA+GGG | + | chr1_3:9572060-9572079 | None:intergenic | 40.0% |
CCAGAGTAGTACTTCTTGTG+TGG | + | chr1_3:9568023-9568042 | None:intergenic | 45.0% | |
!! | CCACACAAGAAGTACTACTC+TGG | - | chr1_3:9568020-9568039 | Msa0102750:three_prime_UTR | 45.0% |
! | TCTCTGCCACCAACTTTTCA+AGG | - | chr1_3:9568999-9569018 | Msa0102750:intron | 45.0% |
CGATTACGGTCCGCTAAATA+TGG | + | chr1_3:9569277-9569296 | None:intergenic | 45.0% | |
GCGCATAATGTTGAAGCCTT+TGG | - | chr1_3:9569394-9569413 | Msa0102750:CDS | 45.0% | |
GCAGATGCAATGTCTATTCC+TGG | - | chr1_3:9569590-9569609 | Msa0102750:intron | 45.0% | |
ATTTGCACCTGTAAGGCCTT+AGG | + | chr1_3:9569964-9569983 | None:intergenic | 45.0% | |
GGCCTTACAGGTGCAAATAA+TGG | - | chr1_3:9569966-9569985 | Msa0102750:CDS | 45.0% | |
AGGGCCATGAAAAAACCAGT+TGG | - | chr1_3:9570093-9570112 | Msa0102750:intron | 45.0% | |
GTTTGGAAAGGCTGAGAAGA+TGG | - | chr1_3:9570671-9570690 | Msa0102750:intron | 45.0% | |
AGAAGACACAGAAAAGGCTC+CGG | - | chr1_3:9570866-9570885 | Msa0102750:intron | 45.0% | |
AAAAGCAAACCACCACTAGC+AGG | + | chr1_3:9570900-9570919 | None:intergenic | 45.0% | |
GCGGCTTATATTTAAAGGCG+AGG | - | chr1_3:9570977-9570996 | Msa0102750:CDS | 45.0% | |
AGGCGAGGAAAGAAAAACCA+AGG | - | chr1_3:9570992-9571011 | Msa0102750:CDS | 45.0% | |
AACTTGCCGCACAAGTAAAC+TGG | + | chr1_3:9571261-9571280 | None:intergenic | 45.0% | |
!! | AAACTCTAAAACACCGGACG+CGG | + | chr1_3:9571358-9571377 | None:intergenic | 45.0% |
TGGCAATTGTGCAGCATGTA+AGG | - | chr1_3:9571424-9571443 | Msa0102750:intron | 45.0% | |
GTGAGCTTAACTCAGTTGGT+AGG | + | chr1_3:9572061-9572080 | None:intergenic | 45.0% | |
TGGATTGCGAGCAACAGTTC+AGG | - | chr1_3:9569215-9569234 | Msa0102750:CDS | 50.0% | |
TTTGTGGCCTAAGGCCTTAC+AGG | - | chr1_3:9569954-9569973 | Msa0102750:CDS | 50.0% | |
CCACGTGACTTCTCATTCTC+AGG | + | chr1_3:9570786-9570805 | None:intergenic | 50.0% | |
CCTGAGAATGAGAAGTCACG+TGG | - | chr1_3:9570783-9570802 | Msa0102750:intron | 50.0% | |
GTCACGTGGAGAGCTTATTG+TGG | - | chr1_3:9570797-9570816 | Msa0102750:intron | 50.0% | |
ACCACACAAATCCGTTTGCG+CGG | - | chr1_3:9570958-9570977 | Msa0102750:CDS | 50.0% | |
CTCAAATTCATTGCCGCGTC+CGG | - | chr1_3:9571342-9571361 | Msa0102750:intron | 50.0% | |
ATGCAGCAGGCCTAACTTTG+AGG | + | chr1_3:9571544-9571563 | None:intergenic | 50.0% | |
GTGTTACCTTTGGATGCAGC+AGG | + | chr1_3:9571557-9571576 | None:intergenic | 50.0% | |
CCTCGTGAGCTTAACTCAGT+TGG | + | chr1_3:9572065-9572084 | None:intergenic | 50.0% | |
CCAACTGAGTTAAGCTCACG+AGG | - | chr1_3:9572062-9572081 | Msa0102750:five_prime_UTR | 50.0% | |
GACACAGAAAAGGCTCCGGA+AGG | - | chr1_3:9570870-9570889 | Msa0102750:intron | 55.0% | |
CCACTAGCAGGTGTTCCTTC+CGG | + | chr1_3:9570888-9570907 | None:intergenic | 55.0% | |
GAAGGAACACCTGCTAGTGG+TGG | - | chr1_3:9570888-9570907 | Msa0102750:intron | 55.0% | |
GTTAGGCCTGCTGCATCCAA+AGG | - | chr1_3:9571548-9571567 | Msa0102750:CDS | 55.0% | |
CCGGAAGGAACACCTGCTAG+TGG | - | chr1_3:9570885-9570904 | Msa0102750:intron | 60.0% | |
! | GCCGCGCAAACGGATTTGTG+TGG | + | chr1_3:9570962-9570981 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 9567920 | 9572223 | 9567920 | ID=Msa0102750;Name=Msa0102750 |
chr1_3 | mRNA | 9567920 | 9572223 | 9567920 | ID=Msa0102750-mRNA-1;Parent=Msa0102750;Name=Msa0102750-mRNA-1;_AED=0.11;_eAED=0.11;_QI=211|1|1|1|0.91|0.84|13|424|535 |
chr1_3 | exon | 9567920 | 9567961 | 9567920 | ID=Msa0102750-mRNA-1:exon:3897;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9567982 | 9568492 | 9567982 | ID=Msa0102750-mRNA-1:exon:3896;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9568574 | 9568705 | 9568574 | ID=Msa0102750-mRNA-1:exon:3895;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9569130 | 9569471 | 9569130 | ID=Msa0102750-mRNA-1:exon:3894;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9569802 | 9570048 | 9569802 | ID=Msa0102750-mRNA-1:exon:3893;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9570145 | 9570221 | 9570145 | ID=Msa0102750-mRNA-1:exon:3892;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9570512 | 9570586 | 9570512 | ID=Msa0102750-mRNA-1:exon:3891;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9570677 | 9570778 | 9570677 | ID=Msa0102750-mRNA-1:exon:3890;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9570907 | 9571025 | 9570907 | ID=Msa0102750-mRNA-1:exon:3889;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9571123 | 9571246 | 9571123 | ID=Msa0102750-mRNA-1:exon:3888;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9571345 | 9571395 | 9571345 | ID=Msa0102750-mRNA-1:exon:3887;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9571489 | 9571587 | 9571489 | ID=Msa0102750-mRNA-1:exon:3886;Parent=Msa0102750-mRNA-1 |
chr1_3 | exon | 9571902 | 9572223 | 9571902 | ID=Msa0102750-mRNA-1:exon:3885;Parent=Msa0102750-mRNA-1 |
chr1_3 | five_prime_UTR | 9572013 | 9572223 | 9572013 | ID=Msa0102750-mRNA-1:five_prime_utr;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9571902 | 9572012 | 9571902 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9571489 | 9571587 | 9571489 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9571345 | 9571395 | 9571345 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9571123 | 9571246 | 9571123 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9570907 | 9571025 | 9570907 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9570677 | 9570778 | 9570677 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9570512 | 9570586 | 9570512 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9570145 | 9570221 | 9570145 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9569802 | 9570048 | 9569802 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9569130 | 9569471 | 9569130 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9568574 | 9568705 | 9568574 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | CDS | 9568364 | 9568492 | 9568364 | ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1 |
chr1_3 | three_prime_UTR | 9567982 | 9568363 | 9567982 | ID=Msa0102750-mRNA-1:three_prime_utr;Parent=Msa0102750-mRNA-1 |
chr1_3 | three_prime_UTR | 9567920 | 9567961 | 9567920 | ID=Msa0102750-mRNA-1:three_prime_utr;Parent=Msa0102750-mRNA-1 |
Gene Sequence |
Protein sequence |