AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0102750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0102750 MtrunA17_Chr1g0156811 98.879 535 6 0 1 535 1 535 0.0 1081
Msa0102750 MtrunA17_Chr1g0199571 52.844 545 244 5 1 534 1 543 0.0 569
Msa0102750 MtrunA17_Chr4g0037111 77.673 318 71 0 18 335 18 335 0.0 532
Msa0102750 MtrunA17_Chr4g0037121 68.878 196 57 2 342 534 1 195 6.92e-95 287
Msa0102750 MtrunA17_Chr4g0064531 31.002 529 320 12 40 532 38 557 6.49e-75 247
Msa0102750 MtrunA17_Chr7g0246311 32.945 343 219 6 59 395 58 395 6.10e-59 204
Msa0102750 MtrunA17_Chr3g0137471 28.957 556 295 18 53 532 51 582 1.10e-56 199
Msa0102750 MtrunA17_Chr8g0351231 31.707 410 251 12 1 395 1 396 7.48e-54 190
Msa0102750 MtrunA17_Chr4g0037181 55.856 111 41 2 342 449 1 106 1.83e-31 119
Msa0102750 MtrunA17_Chr7g0249671 61.250 80 29 2 453 531 2 80 1.53e-20 85.9
Msa0102750 MtrunA17_Chr2g0313621 26.871 294 185 11 67 336 72 359 4.93e-19 90.9
Msa0102750 MtrunA17_Chr6g0478401 41.573 89 47 3 255 343 13 96 3.50e-13 68.2
Msa0102750 MtrunA17_Chr6g0484401 20.537 521 334 23 69 531 97 595 5.41e-13 72.0
Msa0102750 MtrunA17_Chr3g0111361 40.449 89 48 3 255 343 1 84 3.17e-11 62.0
Msa0102750 MtrunA17_Chr2g0280981 38.824 85 47 3 259 343 4 83 9.00e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0102750 AT1G20080.2 71.881 537 146 2 1 534 1 535 0.0 828
Msa0102750 AT1G20080.3 71.881 537 146 2 1 534 1 535 0.0 828
Msa0102750 AT1G20080.4 71.881 537 146 2 1 534 1 535 0.0 828
Msa0102750 AT1G20080.1 71.881 537 146 2 1 534 1 535 0.0 828
Msa0102750 AT1G20080.5 71.881 537 146 2 1 534 1 535 0.0 828
Msa0102750 AT2G20990.1 69.759 539 158 2 1 534 1 539 0.0 794
Msa0102750 AT2G20990.2 66.785 563 158 3 1 534 1 563 0.0 780
Msa0102750 AT2G20990.3 65.165 577 158 3 1 534 1 577 0.0 777
Msa0102750 AT5G04220.2 52.222 540 251 6 1 534 1 539 0.0 558
Msa0102750 AT5G04220.3 54.184 478 212 6 63 534 1 477 0.0 524
Msa0102750 AT2G21010.1 61.628 258 94 2 278 534 1 254 5.81e-112 333
Msa0102750 AT5G04220.1 50.000 316 151 6 225 534 3 317 6.44e-98 300
Msa0102750 AT1G05500.1 30.605 562 339 13 11 532 1 551 3.02e-80 261
Msa0102750 AT1G05500.2 32.134 417 243 10 146 532 1 407 2.12e-58 200
Msa0102750 AT3G61050.2 32.394 355 229 6 60 408 59 408 7.48e-55 193
Msa0102750 AT3G61050.1 32.394 355 229 6 60 408 59 408 7.48e-55 193
Msa0102750 AT2G21040.1 62.069 87 33 0 401 487 2 88 1.60e-34 131
Msa0102750 AT3G60950.1 26.351 296 170 8 73 366 41 290 4.31e-21 97.4
Msa0102750 AT3G61030.1 25.338 296 166 8 73 366 41 283 5.70e-19 90.5
Msa0102750 AT3G14590.1 27.027 296 184 11 67 336 23 312 1.85e-17 86.3
Msa0102750 AT3G14590.2 27.027 296 184 11 67 336 68 357 1.87e-17 86.3
Msa0102750 AT3G14590.3 27.027 296 184 11 67 336 37 326 2.02e-17 86.3
Msa0102750 AT1G48590.4 42.105 95 49 4 249 343 1 89 2.74e-14 71.2
Msa0102750 AT1G48590.1 42.105 95 49 4 249 343 1 89 2.74e-14 71.2
Msa0102750 AT1G48590.2 42.105 95 49 4 249 343 32 120 3.63e-14 72.0
Msa0102750 AT3G14590.5 26.199 271 170 10 92 336 5 271 3.02e-13 72.8
Msa0102750 AT2G01540.1 40.909 88 47 3 256 343 3 85 2.06e-12 66.2
Msa0102750 AT3G14590.4 26.316 247 155 9 113 336 27 269 7.20e-12 68.6
Msa0102750 AT3G17980.1 39.130 92 51 3 252 343 10 96 2.30e-11 63.2
Msa0102750 AT1G73580.1 41.667 96 51 3 255 350 4 94 2.40e-11 62.8

Find 126 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCCATAAGGGTATTTC+TGG 0.176766 1_3:+9571508 None:intergenic
TACTGACCAATCATTCATTA+TGG 0.189172 1_3:+9568347 None:intergenic
GATAACTCATCATCCTTAAA+AGG 0.195494 1_3:+9569287 None:intergenic
TTGCAGCCACATGTTGATTT+TGG 0.196155 1_3:-9570570 Msa0102750:intron
TGTCTATTCCTGGTCTTTAT+AGG 0.201515 1_3:-9570521 Msa0102750:CDS
CTTCAACATCTTCAGCTTCA+TGG 0.205719 1_3:+9569192 None:intergenic
TTTGCGCGGCTTATATTTAA+AGG 0.251485 1_3:-9569149 Msa0102750:CDS
GGAATTTGTTCAGCAATAAT+AGG 0.273016 1_3:+9571191 None:intergenic
TTAAACTCTTCATTCCATTC+TGG 0.286995 1_3:+9569863 None:intergenic
TTTGTGGCCTAAGGCCTTAC+AGG 0.290174 1_3:-9570167 Msa0102750:CDS
TACCATACCTTGTTCAAATA+AGG 0.292069 1_3:+9571337 None:intergenic
AGTACTACTCTGGTTTAGTT+TGG 0.301538 1_3:-9572091 Msa0102750:five_prime_UTR
GCTTAGAAAGAAAGATATAA+TGG 0.304229 1_3:-9569972 Msa0102750:CDS
TGATGAAAAGGAATTGATTA+TGG 0.312221 1_3:-9570984 Msa0102750:CDS
TTTCTTGTTTGCAGCTTGAT+TGG 0.313508 1_3:-9571387 Msa0102750:intron
TTAACTGCAACTATAATGTT+AGG 0.313515 1_3:+9570935 None:intergenic
GGATCCTACATTTACTCCTT+TGG 0.316311 1_3:-9571566 Msa0102750:CDS
TGCTTCCAGAAATACCCTTA+TGG 0.317531 1_3:-9571513 Msa0102750:CDS
ATAGTTGCAGTTAAAGCATT+TGG 0.324968 1_3:-9570926 Msa0102750:CDS
CATGAGAGACACGTAAATAT+TGG 0.325285 1_3:+9570683 None:intergenic
TAATGCTTAATGTTTATGAT+TGG 0.327754 1_3:-9569808 Msa0102750:CDS
ATGATTGGTCAGTAGTAAAT+AGG 0.332208 1_3:-9568338 Msa0102750:three_prime_UTR
AATTTAAGAGTAAGTAGTTT+TGG 0.333174 1_3:+9569386 None:intergenic
GGCCTTACAGGTGCAAATAA+TGG 0.335538 1_3:-9570155 Msa0102750:CDS
TGCATAATATATGCAAGATC+TGG 0.336409 1_3:+9568091 None:intergenic
GCGCATAATGTTGAAGCCTT+TGG 0.341358 1_3:-9570727 Msa0102750:CDS
TTTCATATTAAATTATGATT+TGG 0.342716 1_3:+9568032 None:intergenic
TTCTCATTCTCAGGATCATT+AGG 0.353471 1_3:+9569347 None:intergenic
TTATGGAATTATCAATGAAA+TGG 0.362011 1_3:-9570967 Msa0102750:CDS
ACTGACCAATCATTCATTAT+GGG 0.371685 1_3:+9568348 None:intergenic
TTGAGTTTAAGTTTCACATA+AGG 0.380151 1_3:+9569938 None:intergenic
AACATAAAGTCTCTCATTGA+TGG 0.380639 1_3:+9568619 None:intergenic
TGAGTTTAAGTTTCACATAA+GGG 0.381669 1_3:+9569939 None:intergenic
TGGCAATTGTGCAGCATGTA+AGG 0.397069 1_3:-9568697 Msa0102750:intron
TGAAATGTTTCACCCCATCT+TGG 0.402322 1_3:+9568662 None:intergenic
TCAGGAAATTATAAAAGATC+AGG 0.404435 1_3:-9570203 Msa0102750:intron
ACTTCACTTGGATTGTTGAT+TGG 0.408025 1_3:-9571942 Msa0102750:CDS
GCAGATGCAATGTCTATTCC+TGG 0.408163 1_3:-9570531 Msa0102750:CDS
ATGCATGTAACATGGAAGTT+TGG 0.411112 1_3:-9568288 Msa0102750:three_prime_UTR
AATGCTTAATGTTTATGATT+GGG 0.413882 1_3:-9569807 Msa0102750:CDS
ATCCATTATTTGCACCTGTA+AGG 0.414927 1_3:+9570153 None:intergenic
CTTAGAAAGAAAGATATAAT+GGG 0.420642 1_3:-9569971 Msa0102750:CDS
CAACTTCAATATCAATGTCT+AGG 0.423562 1_3:+9572015 None:intergenic
CCACTAGCAGGTGTTCCTTC+CGG 0.429816 1_3:+9569236 None:intergenic
ATGCAGCAGGCCTAACTTTG+AGG 0.430649 1_3:+9568580 None:intergenic
TAATGTTTATGATTGGGAAC+AGG 0.431633 1_3:-9569801 Msa0102750:intron
GTTTGGAAAGGCTGAGAAGA+TGG 0.433941 1_3:-9569450 Msa0102750:CDS
TAACATACACGGTCATAGTC+TGG 0.434799 1_3:+9571481 None:intergenic
CCACGTGACTTCTCATTCTC+AGG 0.435478 1_3:+9569338 None:intergenic
TGAATTTGAAGAACTTAACT+TGG 0.437517 1_3:-9571147 Msa0102750:CDS
TGGATTGCGAGCAACAGTTC+AGG 0.437684 1_3:-9570906 Msa0102750:intron
GTGTTACCTTTGGATGCAGC+AGG 0.438661 1_3:+9568567 None:intergenic
GAATTATCAATGAAATGGGC+TGG 0.454207 1_3:-9570962 Msa0102750:CDS
TTCACATGAAGAATTCCAAC+TGG 0.456262 1_3:+9570013 None:intergenic
AGTGTATAGCACTGATGAAA+AGG 0.456613 1_3:-9570996 Msa0102750:CDS
TTTGGTGTAAGCTCTTTCAA+TGG 0.460667 1_3:+9569413 None:intergenic
TTAAATATAAGCCGCGCAAA+CGG 0.466177 1_3:+9569152 None:intergenic
GCATAATATATGCAAGATCT+GGG 0.470763 1_3:+9568092 None:intergenic
CATGAAGCTGAAGATGTTGA+AGG 0.474251 1_3:-9569191 Msa0102750:CDS
TTTGGAATTGGAACTTCACT+TGG 0.478660 1_3:-9571954 Msa0102750:CDS
ATAAATTTGTTGAGTGTATG+TGG 0.489433 1_3:-9571360 Msa0102750:CDS
TAATTTAATATGAAAACTCC+AGG 0.491685 1_3:-9568024 Msa0102750:three_prime_UTR
TGGAGCTTTGTTTGAAAATG+TGG 0.497538 1_3:-9568268 Msa0102750:three_prime_UTR
CTATGTATACCTTGAAAAGT+TGG 0.499556 1_3:+9571113 None:intergenic
TATGGAATTATCAATGAAAT+GGG 0.501349 1_3:-9570966 Msa0102750:CDS
TCAGGAAACTCTTGGATATG+TGG 0.502591 1_3:-9568474 Msa0102750:intron
AGAACCCCATAATGAATGAT+TGG 0.503884 1_3:-9568353 Msa0102750:exon
AACTTCAATATCAATGTCTA+GGG 0.503960 1_3:+9572016 None:intergenic
TTACGTGTCTCTCATGGAAA+AGG 0.505863 1_3:-9570676 Msa0102750:intron
AAACCTTCTTAATTAAACAT+AGG 0.507037 1_3:+9567974 None:intergenic
ACATAAAGTCTCTCATTGAT+GGG 0.508044 1_3:+9568620 None:intergenic
ACTTAGTTAGTACTAGTAGT+AGG 0.508370 1_3:-9572041 Msa0102750:five_prime_UTR
ATAAGTGCATCCTCAAAGTT+AGG 0.515045 1_3:-9568590 Msa0102750:CDS
ATTTGCACCTGTAAGGCCTT+AGG 0.516595 1_3:+9570160 None:intergenic
CAATATTTACGTGTCTCTCA+TGG 0.518490 1_3:-9570682 Msa0102750:CDS
TGGTCTTTATAGGATTGTCC+AGG 0.532727 1_3:-9570511 Msa0102750:intron
AATTATCAATGAAATGGGCT+GGG 0.534000 1_3:-9570961 Msa0102750:CDS
AACATTTCAATTTACGCTAG+AGG 0.535589 1_3:-9568648 Msa0102750:CDS
GTGAGCTTAACTCAGTTGGT+AGG 0.537253 1_3:+9568063 None:intergenic
AACAATGATACATACTGTGA+TGG 0.538427 1_3:+9570130 None:intergenic
AGATTCAAATTGAGCTTCAG+TGG 0.538926 1_3:-9568376 Msa0102750:CDS
CTTTCAATCAATAGATGTCA+AGG 0.552952 1_3:-9571901 Msa0102750:intron
ACAAGAACTTGAATCCAGAA+TGG 0.555590 1_3:-9569877 Msa0102750:CDS
TTTGGAAAGGCTGAGAAGAT+GGG 0.557070 1_3:-9569449 Msa0102750:CDS
AACTTCCATGTTACATGCAT+AGG 0.557803 1_3:+9568291 None:intergenic
TTGGCGAAACAAGGAAAACT+AGG 0.559504 1_3:+9570702 None:intergenic
CCTCGTGAGCTTAACTCAGT+TGG 0.563249 1_3:+9568059 None:intergenic
GAATTCAGAAGACACAGAAA+AGG 0.566484 1_3:-9569261 Msa0102750:CDS
TTAGCTTCTTGCTCAACCAA+AGG 0.569279 1_3:+9571550 None:intergenic
AAAAGCAAACCACCACTAGC+AGG 0.570645 1_3:+9569224 None:intergenic
TCAACCAAAGGAGTAAATGT+AGG 0.571099 1_3:+9571562 None:intergenic
AGAAGACACAGAAAAGGCTC+CGG 0.576031 1_3:-9569255 Msa0102750:CDS
GGTGGTTAACTAGTTTGGAA+AGG 0.576754 1_3:-9569462 Msa0102750:intron
GAATTTGAAGAACTTAACTT+GGG 0.579840 1_3:-9571146 Msa0102750:CDS
TGAGCTTAACTCAGTTGGTA+GGG 0.580072 1_3:+9568064 None:intergenic
CAAGGAAAACTAGGAACCAA+AGG 0.582613 1_3:+9570711 None:intergenic
CTGACCAATCATTCATTATG+GGG 0.585607 1_3:+9568349 None:intergenic
TGTATACCTTGAAAAGTTGG+TGG 0.590094 1_3:+9571116 None:intergenic
GTTAGGCCTGCTGCATCCAA+AGG 0.591098 1_3:-9568573 Msa0102750:intron
CCACACAAGAAGTACTACTC+TGG 0.593938 1_3:-9572101 Msa0102750:five_prime_UTR
CCAGAGTAGTACTTCTTGTG+TGG 0.597948 1_3:+9572101 None:intergenic
GTCACGTGGAGAGCTTATTG+TGG 0.600730 1_3:-9569324 Msa0102750:CDS
TTTCTCCTAAAATTTGACCC+TGG 0.604163 1_3:+9568006 None:intergenic
TTTAATCCAAAATCAACATG+TGG 0.608108 1_3:+9570564 None:intergenic
GACACAGAAAAGGCTCCGGA+AGG 0.610551 1_3:-9569251 Msa0102750:CDS
ACGTAAATATTGGCGAAACA+AGG 0.611735 1_3:+9570693 None:intergenic
ACCACACAAATCCGTTTGCG+CGG 0.615343 1_3:-9569163 Msa0102750:CDS
CATAAAGTCTCTCATTGATG+GGG 0.616421 1_3:+9568621 None:intergenic
CCGGAAGGAACACCTGCTAG+TGG 0.626646 1_3:-9569236 Msa0102750:CDS
ATAAAGTCTCTCATTGATGG+GGG 0.628586 1_3:+9568622 None:intergenic
GCGGCTTATATTTAAAGGCG+AGG 0.630495 1_3:-9569144 Msa0102750:CDS
GTACTCCTATGCATGTAACA+TGG 0.631222 1_3:-9568296 Msa0102750:three_prime_UTR
CCAACTGAGTTAAGCTCACG+AGG 0.635206 1_3:-9568059 Msa0102750:three_prime_UTR
AGAAAGAAAGATATAATGGG+AGG 0.645260 1_3:-9569968 Msa0102750:CDS
TATGTGGCCTTATTTGAACA+AGG 0.651291 1_3:-9571344 Msa0102750:intron
CCTGAGAATGAGAAGTCACG+TGG 0.651349 1_3:-9569338 Msa0102750:CDS
GAAGGAACACCTGCTAGTGG+TGG 0.656477 1_3:-9569233 Msa0102750:CDS
ATGGAATGAAGAGTTTAATG+TGG 0.658297 1_3:-9569858 Msa0102750:CDS
TGGACAATCCTATAAAGACC+AGG 0.668034 1_3:+9570513 None:intergenic
ATAGGAGTACAAACTTACAA+TGG 0.668584 1_3:+9568309 None:intergenic
GCCGCGCAAACGGATTTGTG+TGG 0.677878 1_3:+9569162 None:intergenic
AATTTAATATGAAAACTCCA+GGG 0.678555 1_3:-9568023 Msa0102750:three_prime_UTR
AAAGGCTTCAACATTATGCG+CGG 0.685990 1_3:+9570729 None:intergenic
CATAATATATGCAAGATCTG+GGG 0.688869 1_3:+9568093 None:intergenic
TAAAGTCTCTCATTGATGGG+GGG 0.690358 1_3:+9568623 None:intergenic
AAATTAGAAAAGAAAAGACA+AGG 0.696021 1_3:+9572158 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAAAAACTAAAATATA+AGG + chr1_3:9568497-9568516 None:intergenic 10.0%
!! TTCTTGATATATTAAAAATA+TGG - chr1_3:9568513-9568532 Msa0102750:intron 10.0%
!! AATAATAATAATAACATACA+CGG + chr1_3:9568654-9568673 None:intergenic 10.0%
!!! ATTGATTTTCAAAATTTTAT+TGG - chr1_3:9568819-9568838 Msa0102750:intron 10.0%
!! TATAACATAACATTATAATT+AGG - chr1_3:9570031-9570050 Msa0102750:intron 10.0%
!! TTTCATATTAAATTATGATT+TGG + chr1_3:9572092-9572111 None:intergenic 10.0%
!! TCAAATATAAACAAAAAAAG+CGG - chr1_3:9569251-9569270 Msa0102750:CDS 15.0%
!! TTATGTTATAAACTCATAAA+GGG + chr1_3:9570021-9570040 None:intergenic 15.0%
!!! TCAAAATTTTTAAAAAGTTG+AGG - chr1_3:9570484-9570503 Msa0102750:intron 15.0%
!! TAATATATAGAAGAATTAGA+TGG + chr1_3:9571066-9571085 None:intergenic 15.0%
!! TAAAGTAAGTATAGATTAAA+AGG + chr1_3:9571317-9571336 None:intergenic 15.0%
!!! TTCCAAATCATAATTTTTTT+TGG - chr1_3:9571990-9572009 Msa0102750:CDS 15.0%
!!! ATAAATTTGTTTTGAATGAA+TGG + chr1_3:9572181-9572200 None:intergenic 15.0%
!! AAATTAGAAAAGAAAAGACA+AGG + chr1_3:9567966-9567985 None:intergenic 20.0%
!!! AACTATACTACTTTTTTAGA+GGG + chr1_3:9568701-9568720 None:intergenic 20.0%
!! GTTGATCCAAATATATAATA+TGG - chr1_3:9569089-9569108 Msa0102750:intron 20.0%
!! TTATGGAATTATCAATGAAA+TGG - chr1_3:9569154-9569173 Msa0102750:CDS 20.0%
!! TATGGAATTATCAATGAAAT+GGG - chr1_3:9569155-9569174 Msa0102750:CDS 20.0%
!!! TTTTTGTTTATATTTGAGTC+CGG + chr1_3:9569248-9569267 None:intergenic 20.0%
!!! TTCATTTTCTGTTGTTAAAA+AGG + chr1_3:9569305-9569324 None:intergenic 20.0%
!! CAAGAATAATATTAATGACA+TGG + chr1_3:9569656-9569675 None:intergenic 20.0%
!! TACAAAAAAGATTTAGTGAT+CGG - chr1_3:9569682-9569701 Msa0102750:intron 20.0%
!!! TTTAGCGATATTTTTCAAAT+CGG - chr1_3:9569754-9569773 Msa0102750:intron 20.0%
!! GTTATGTTATAAACTCATAA+AGG + chr1_3:9570022-9570041 None:intergenic 20.0%
!! TAATTAGGTGTTAATTAGAT+TGG - chr1_3:9570046-9570065 Msa0102750:intron 20.0%
!! CTTAGAAAGAAAGATATAAT+GGG - chr1_3:9570150-9570169 Msa0102750:CDS 20.0%
!! TAATGCTTAATGTTTATGAT+TGG - chr1_3:9570313-9570332 Msa0102750:intron 20.0%
!! AATGCTTAATGTTTATGATT+GGG - chr1_3:9570314-9570333 Msa0102750:intron 20.0%
!!! AAAACATTTAAAATCTCTTC+TGG + chr1_3:9570455-9570474 None:intergenic 20.0%
!!! GAAGAGATTTTAAATGTTTT+TGG - chr1_3:9570455-9570474 Msa0102750:intron 20.0%
!!! AATTTAAGAGTAAGTAGTTT+TGG + chr1_3:9570738-9570757 None:intergenic 20.0%
!! TTAATCTATACTTACTTTAG+AGG - chr1_3:9571318-9571337 Msa0102750:intron 20.0%
!!! ATACATAGTTTTATGTCTTA+TGG - chr1_3:9571590-9571609 Msa0102750:intron 20.0%
!!! AATTTGAATCTTTCCATTTT+TGG + chr1_3:9571736-9571755 None:intergenic 20.0%
!! TACTCATGAAAAAAGATAAA+AGG - chr1_3:9571910-9571929 Msa0102750:CDS 20.0%
!! CACCAAAAAAAATTATGATT+TGG + chr1_3:9571995-9572014 None:intergenic 20.0%
!!! ATCATAATTTTTTTTGGTGT+CGG - chr1_3:9571996-9572015 Msa0102750:exon 20.0%
!! TAATTTAATATGAAAACTCC+AGG - chr1_3:9572097-9572116 Msa0102750:five_prime_UTR 20.0%
!! AATTTAATATGAAAACTCCA+GGG - chr1_3:9572098-9572117 Msa0102750:five_prime_UTR 20.0%
!! TTACCTATGTTTAATTAAGA+AGG - chr1_3:9572144-9572163 Msa0102750:five_prime_UTR 20.0%
!! AAACCTTCTTAATTAAACAT+AGG + chr1_3:9572150-9572169 None:intergenic 20.0%
!! TATGTTTAATTAAGAAGGTT+TGG - chr1_3:9572149-9572168 Msa0102750:five_prime_UTR 20.0%
! AACTTCAATATCAATGTCTA+GGG + chr1_3:9568108-9568127 None:intergenic 25.0%
!!! AGTACTATAGCTAGTTTTTT+AGG - chr1_3:9568143-9568162 Msa0102750:three_prime_UTR 25.0%
!!! ATAGCTAGTTTTTTAGGATT+TGG - chr1_3:9568149-9568168 Msa0102750:three_prime_UTR 25.0%
!!! AGTTTTTTAGGATTTGGAAT+TGG - chr1_3:9568155-9568174 Msa0102750:three_prime_UTR 25.0%
! TAAAGTTGTGATCTGTAAAA+AGG - chr1_3:9568305-9568324 Msa0102750:three_prime_UTR 25.0%
!!! TCTGGATTTTTTATCCATAA+GGG + chr1_3:9568625-9568644 None:intergenic 25.0%
!!! CAACTATACTACTTTTTTAG+AGG + chr1_3:9568702-9568721 None:intergenic 25.0%
!!! ATAAATTTGTTGAGTGTATG+TGG - chr1_3:9568761-9568780 Msa0102750:intron 25.0%
!! TATGGTTAGTACAACTATTT+TGG - chr1_3:9568858-9568877 Msa0102750:intron 25.0%
!!! TTTTGGTTGAATGTTGTTAT+AGG - chr1_3:9568875-9568894 Msa0102750:intron 25.0%
!! ACTGAATCAATTTTGTACTT+TGG + chr1_3:9568954-9568973 None:intergenic 25.0%
! TGAATTTGAAGAACTTAACT+TGG - chr1_3:9568974-9568993 Msa0102750:intron 25.0%
! GAATTTGAAGAACTTAACTT+GGG - chr1_3:9568975-9568994 Msa0102750:intron 25.0%
! CTGCAACCATATTATATATT+TGG + chr1_3:9569098-9569117 None:intergenic 25.0%
! CAAATATATAATATGGTTGC+AGG - chr1_3:9569096-9569115 Msa0102750:intron 25.0%
! TGATGAAAAGGAATTGATTA+TGG - chr1_3:9569137-9569156 Msa0102750:CDS 25.0%
! TTAACTGCAACTATAATGTT+AGG + chr1_3:9569189-9569208 None:intergenic 25.0%
!! TATATGCTTTAAATGATTGC+AGG - chr1_3:9569343-9569362 Msa0102750:CDS 25.0%
! TTTAATCCAAAATCAACATG+TGG + chr1_3:9569560-9569579 None:intergenic 25.0%
!! GATTTTGGATTAAAACTACT+TGG - chr1_3:9569566-9569585 Msa0102750:intron 25.0%
! ATAGACCAAAATTGACAAAT+TGG - chr1_3:9569708-9569727 Msa0102750:intron 25.0%
!! AGTTGATATAGAAACTGATT+CGG - chr1_3:9569794-9569813 Msa0102750:intron 25.0%
! TCAGGAAATTATAAAAGATC+AGG - chr1_3:9569918-9569937 Msa0102750:CDS 25.0%
!!! TTAGATTGGCTAATTTTACT+TGG - chr1_3:9570060-9570079 Msa0102750:intron 25.0%
!!! TTTTACTTGGTTAATTTGTC+AGG - chr1_3:9570073-9570092 Msa0102750:intron 25.0%
!!! TTTACTTGGTTAATTTGTCA+GGG - chr1_3:9570074-9570093 Msa0102750:intron 25.0%
! GCTTAGAAAGAAAGATATAA+TGG - chr1_3:9570149-9570168 Msa0102750:CDS 25.0%
!! TGAGTTTAAGTTTCACATAA+GGG + chr1_3:9570185-9570204 None:intergenic 25.0%
!! TTGAGTTTAAGTTTCACATA+AGG + chr1_3:9570186-9570205 None:intergenic 25.0%
! ATGCAAATTTAGACTAAAGT+TGG - chr1_3:9570359-9570378 Msa0102750:intron 25.0%
!!! GTGAATGTTTTGGTTAAAAA+TGG - chr1_3:9570427-9570446 Msa0102750:intron 25.0%
!! AAGTTTTCAAAATTGCAAAC+TGG + chr1_3:9570512-9570531 None:intergenic 25.0%
!! GAAATTTAAAATTTGCAGAC+TGG + chr1_3:9570542-9570561 None:intergenic 25.0%
! ATTGCTTGATTAACATTCTA+AGG + chr1_3:9570577-9570596 None:intergenic 25.0%
! CATGCTTGAAAATATGTTAT+AGG + chr1_3:9570624-9570643 None:intergenic 25.0%
!! AGTTATGTACAAACCTTTTA+AGG - chr1_3:9570821-9570840 Msa0102750:intron 25.0%
! GATCTGATAAAATAATACCT+TGG + chr1_3:9571012-9571031 None:intergenic 25.0%
! GAAAGTCAACAAATCATAAT+CGG + chr1_3:9571093-9571112 None:intergenic 25.0%
!! TCTAAAATATGTAACTGCTT+TGG - chr1_3:9571206-9571225 Msa0102750:CDS 25.0%
! AAAAGGAAGAAATCAATAGT+TGG + chr1_3:9571300-9571319 None:intergenic 25.0%
! AATGGTTAAATCTCATTGAA+AGG + chr1_3:9571398-9571417 None:intergenic 25.0%
!!! GAGATTTAACCATTGTTTTA+TGG - chr1_3:9571404-9571423 Msa0102750:intron 25.0%
!!! TTAATACCTTGTTTTGAATC+AGG - chr1_3:9571629-9571648 Msa0102750:intron 25.0%
!!! TCATAATTTTTTTTGGTGTC+GGG - chr1_3:9571997-9572016 Msa0102750:exon 25.0%
ACTTAGTTAGTACTAGTAGT+AGG - chr1_3:9568080-9568099 Msa0102750:three_prime_UTR 30.0%
CAACTTCAATATCAATGTCT+AGG + chr1_3:9568109-9568128 None:intergenic 30.0%
CTTTCAATCAATAGATGTCA+AGG - chr1_3:9568220-9568239 Msa0102750:three_prime_UTR 30.0%
!! TTTATCCATAAGGGTATTTC+TGG + chr1_3:9568616-9568635 None:intergenic 30.0%
!!! GTCTGGATTTTTTATCCATA+AGG + chr1_3:9568626-9568645 None:intergenic 30.0%
TACCATACCTTGTTCAAATA+AGG + chr1_3:9568787-9568806 None:intergenic 30.0%
! GGAATTTGTTCAGCAATAAT+AGG + chr1_3:9568933-9568952 None:intergenic 30.0%
CTATGTATACCTTGAAAAGT+TGG + chr1_3:9569011-9569030 None:intergenic 30.0%
! AATTATCAATGAAATGGGCT+GGG - chr1_3:9569160-9569179 Msa0102750:CDS 30.0%
! ATAGTTGCAGTTAAAGCATT+TGG - chr1_3:9569195-9569214 Msa0102750:CDS 30.0%
!! TTAAAAAGGTGCATCGATTA+CGG + chr1_3:9569291-9569310 None:intergenic 30.0%
CATTTGTTCATCACAATGTT+AGG + chr1_3:9569496-9569515 None:intergenic 30.0%
! AGTGACCAATTTGTCAATTT+TGG + chr1_3:9569716-9569735 None:intergenic 30.0%
AGGTTGCAAAAATGTATTTG+TGG - chr1_3:9569938-9569957 Msa0102750:CDS 30.0%
AAAAATGTATTTGTGGCCTA+AGG - chr1_3:9569945-9569964 Msa0102750:CDS 30.0%
AACAATGATACATACTGTGA+TGG + chr1_3:9569994-9570013 None:intergenic 30.0%
!!! AATTCCAACTGGTTTTTTCA+TGG + chr1_3:9570100-9570119 None:intergenic 30.0%
! AGAAAGAAAGATATAATGGG+AGG - chr1_3:9570153-9570172 Msa0102750:CDS 30.0%
TTAAACTCTTCATTCCATTC+TGG + chr1_3:9570261-9570280 None:intergenic 30.0%
ATGGAATGAAGAGTTTAATG+TGG - chr1_3:9570263-9570282 Msa0102750:intron 30.0%
!!! AGCATTAAGTTTTGAGATTC+TGG + chr1_3:9570300-9570319 None:intergenic 30.0%
TAATGTTTATGATTGGGAAC+AGG - chr1_3:9570320-9570339 Msa0102750:intron 30.0%
! AGCATGTTACTTATTTCCTA+TGG - chr1_3:9570638-9570657 Msa0102750:intron 30.0%
! ATGTTACTTATTTCCTATGG+TGG - chr1_3:9570641-9570660 Msa0102750:intron 30.0%
!!! GTAAGTAGTTTTGGTTCATT+TGG + chr1_3:9570729-9570748 None:intergenic 30.0%
GATAACTCATCATCCTTAAA+AGG + chr1_3:9570837-9570856 None:intergenic 30.0%
ACTTTCGATTTATTGCTATC+AGG - chr1_3:9571107-9571126 Msa0102750:intron 30.0%
ACTAAGAAATAGATGACAAG+TGG + chr1_3:9571138-9571157 None:intergenic 30.0%
!! TCAAACAAACTCTAAAACAC+CGG + chr1_3:9571364-9571383 None:intergenic 30.0%
GAAAAATAGAGATCCAAGAT+GGG - chr1_3:9571446-9571465 Msa0102750:intron 30.0%
AAAAATAGAGATCCAAGATG+GGG - chr1_3:9571447-9571466 Msa0102750:intron 30.0%
AACATTTCAATTTACGCTAG+AGG - chr1_3:9571473-9571492 Msa0102750:intron 30.0%
ACATAAAGTCTCTCATTGAT+GGG + chr1_3:9571504-9571523 None:intergenic 30.0%
AACATAAAGTCTCTCATTGA+TGG + chr1_3:9571505-9571524 None:intergenic 30.0%
TTGATCTTTAGTGTTACCTT+TGG + chr1_3:9571567-9571586 None:intergenic 30.0%
!! CATCTTATTGACTCCAAAAA+TGG - chr1_3:9571720-9571739 Msa0102750:intron 30.0%
ACTGACCAATCATTCATTAT+GGG + chr1_3:9571776-9571795 None:intergenic 30.0%
TACTGACCAATCATTCATTA+TGG + chr1_3:9571777-9571796 None:intergenic 30.0%
! ATGATTGGTCAGTAGTAAAT+AGG - chr1_3:9571783-9571802 Msa0102750:intron 30.0%
! ATAGGAGTACAAACTTACAA+TGG + chr1_3:9571815-9571834 None:intergenic 30.0%
!!! CATAATTTTTTTTGGTGTCG+GGG - chr1_3:9571998-9572017 Msa0102750:exon 30.0%
CATAATATATGCAAGATCTG+GGG + chr1_3:9572031-9572050 None:intergenic 30.0%
GCATAATATATGCAAGATCT+GGG + chr1_3:9572032-9572051 None:intergenic 30.0%
TGCATAATATATGCAAGATC+TGG + chr1_3:9572033-9572052 None:intergenic 30.0%
! AGTACTACTCTGGTTTAGTT+TGG - chr1_3:9568030-9568049 Msa0102750:three_prime_UTR 35.0%
! TTTGGAATTGGAACTTCACT+TGG - chr1_3:9568167-9568186 Msa0102750:three_prime_UTR 35.0%
ACTTCACTTGGATTGTTGAT+TGG - chr1_3:9568179-9568198 Msa0102750:three_prime_UTR 35.0%
!! GGCATGTTTGTTATGATTTC+AGG - chr1_3:9568534-9568553 Msa0102750:intron 35.0%
TCAACCAAAGGAGTAAATGT+AGG + chr1_3:9568562-9568581 None:intergenic 35.0%
! TTTCTTGTTTGCAGCTTGAT+TGG - chr1_3:9568734-9568753 Msa0102750:intron 35.0%
!! TATGTGGCCTTATTTGAACA+AGG - chr1_3:9568777-9568796 Msa0102750:intron 35.0%
! GGCATCTATGAGATTTTGTA+TGG - chr1_3:9568840-9568859 Msa0102750:intron 35.0%
TGTATACCTTGAAAAGTTGG+TGG + chr1_3:9569008-9569027 None:intergenic 35.0%
!! AGTGTATAGCACTGATGAAA+AGG - chr1_3:9569125-9569144 Msa0102750:intron 35.0%
GAATTATCAATGAAATGGGC+TGG - chr1_3:9569159-9569178 Msa0102750:CDS 35.0%
AAAAAAGCGGCCATATTTAG+CGG - chr1_3:9569264-9569283 Msa0102750:CDS 35.0%
ACGTAAATATTGGCGAAACA+AGG + chr1_3:9569431-9569450 None:intergenic 35.0%
CATGAGAGACACGTAAATAT+TGG + chr1_3:9569441-9569460 None:intergenic 35.0%
CAATATTTACGTGTCTCTCA+TGG - chr1_3:9569439-9569458 Msa0102750:CDS 35.0%
! TGTCTATTCCTGGTCTTTAT+AGG - chr1_3:9569600-9569619 Msa0102750:intron 35.0%
!! ATATCCTCTCACTTGTTTTC+AGG - chr1_3:9569900-9569919 Msa0102750:CDS 35.0%
ATTTCCTGAAAACAAGTGAG+AGG + chr1_3:9569907-9569926 None:intergenic 35.0%
ATCCATTATTTGCACCTGTA+AGG + chr1_3:9569971-9569990 None:intergenic 35.0%
TTCACATGAAGAATTCCAAC+TGG + chr1_3:9570111-9570130 None:intergenic 35.0%
ACAAGAACTTGAATCCAGAA+TGG - chr1_3:9570244-9570263 Msa0102750:intron 35.0%
TTGGATGTAAGATTATCAGC+AGG - chr1_3:9570378-9570397 Msa0102750:intron 35.0%
!!! GGAAACTTTTAGAGTGTGTT+TGG - chr1_3:9570399-9570418 Msa0102750:intron 35.0%
!!! ACTTTTAGAGTGTGTTTGGA+TGG - chr1_3:9570403-9570422 Msa0102750:intron 35.0%
!! TAACATTCTAAGGCTGTGTT+TGG + chr1_3:9570567-9570586 None:intergenic 35.0%
! TTTGGTGTAAGCTCTTTCAA+TGG + chr1_3:9570711-9570730 None:intergenic 35.0%
TTCTCATTCTCAGGATCATT+AGG + chr1_3:9570777-9570796 None:intergenic 35.0%
GAATTCAGAAGACACAGAAA+AGG - chr1_3:9570860-9570879 Msa0102750:intron 35.0%
TTAAATATAAGCCGCGCAAA+CGG + chr1_3:9570972-9570991 None:intergenic 35.0%
TTTGCGCGGCTTATATTTAA+AGG - chr1_3:9570972-9570991 Msa0102750:CDS 35.0%
! TAACTGCTTTGGATCATTGA+TGG - chr1_3:9571217-9571236 Msa0102750:CDS 35.0%
TAGATACCAGTTTACTTGTG+CGG - chr1_3:9571252-9571271 Msa0102750:intron 35.0%
GCACAATTGCCATAAAACAA+TGG + chr1_3:9571416-9571435 None:intergenic 35.0%
GGAAAAATAGAGATCCAAGA+TGG - chr1_3:9571445-9571464 Msa0102750:intron 35.0%
ATAAAGTCTCTCATTGATGG+GGG + chr1_3:9571502-9571521 None:intergenic 35.0%
CATAAAGTCTCTCATTGATG+GGG + chr1_3:9571503-9571522 None:intergenic 35.0%
ATAAGTGCATCCTCAAAGTT+AGG - chr1_3:9571531-9571550 Msa0102750:CDS 35.0%
GAGTTTCCTGATTCAAAACA+AGG + chr1_3:9571638-9571657 None:intergenic 35.0%
!! GTTTTGAATCAGGAAACTCT+TGG - chr1_3:9571639-9571658 Msa0102750:intron 35.0%
AGATTCAAATTGAGCTTCAG+TGG - chr1_3:9571745-9571764 Msa0102750:intron 35.0%
AGAACCCCATAATGAATGAT+TGG - chr1_3:9571768-9571787 Msa0102750:intron 35.0%
CTGACCAATCATTCATTATG+GGG + chr1_3:9571775-9571794 None:intergenic 35.0%
AACTTCCATGTTACATGCAT+AGG + chr1_3:9571833-9571852 None:intergenic 35.0%
ATGCATGTAACATGGAAGTT+TGG - chr1_3:9571833-9571852 Msa0102750:intron 35.0%
!! TGGAGCTTTGTTTGAAAATG+TGG - chr1_3:9571853-9571872 Msa0102750:intron 35.0%
! AAACTCCAGGGTCAAATTTT+AGG - chr1_3:9572110-9572129 Msa0102750:five_prime_UTR 35.0%
TTTCTCCTAAAATTTGACCC+TGG + chr1_3:9572118-9572137 None:intergenic 35.0%
GGATCCTACATTTACTCCTT+TGG - chr1_3:9568555-9568574 Msa0102750:intron 40.0%
TTAGCTTCTTGCTCAACCAA+AGG + chr1_3:9568574-9568593 None:intergenic 40.0%
TGCTTCCAGAAATACCCTTA+TGG - chr1_3:9568608-9568627 Msa0102750:CDS 40.0%
TAACATACACGGTCATAGTC+TGG + chr1_3:9568643-9568662 None:intergenic 40.0%
!! GGCCTTATTTGAACAAGGTA+TGG - chr1_3:9568782-9568801 Msa0102750:intron 40.0%
CAACAGTTCAGGTATTTCTC+CGG - chr1_3:9569226-9569245 Msa0102750:CDS 40.0%
AAAGGCTTCAACATTATGCG+CGG + chr1_3:9569395-9569414 None:intergenic 40.0%
CAAGGAAAACTAGGAACCAA+AGG + chr1_3:9569413-9569432 None:intergenic 40.0%
TTGGCGAAACAAGGAAAACT+AGG + chr1_3:9569422-9569441 None:intergenic 40.0%
TTACGTGTCTCTCATGGAAA+AGG - chr1_3:9569445-9569464 Msa0102750:CDS 40.0%
!!! TTGCAGCCACATGTTGATTT+TGG - chr1_3:9569551-9569570 Msa0102750:intron 40.0%
TGGACAATCCTATAAAGACC+AGG + chr1_3:9569611-9569630 None:intergenic 40.0%
TGGTCTTTATAGGATTGTCC+AGG - chr1_3:9569610-9569629 Msa0102750:intron 40.0%
GTGCTATAGTATATGCTACC+TGG + chr1_3:9569631-9569650 None:intergenic 40.0%
! TTTGGATGGCGTGAATGTTT+TGG - chr1_3:9570417-9570436 Msa0102750:intron 40.0%
CCAAACTAGTTAACCACCAT+AGG + chr1_3:9570657-9570676 None:intergenic 40.0%
CCTATGGTGGTTAACTAGTT+TGG - chr1_3:9570654-9570673 Msa0102750:intron 40.0%
! GGTGGTTAACTAGTTTGGAA+AGG - chr1_3:9570659-9570678 Msa0102750:intron 40.0%
TTTGGAAAGGCTGAGAAGAT+GGG - chr1_3:9570672-9570691 Msa0102750:intron 40.0%
CTTCAACATCTTCAGCTTCA+TGG + chr1_3:9570932-9570951 None:intergenic 40.0%
CATGAAGCTGAAGATGTTGA+AGG - chr1_3:9570930-9570949 Msa0102750:CDS 40.0%
TGAAATGTTTCACCCCATCT+TGG + chr1_3:9571462-9571481 None:intergenic 40.0%
TAAAGTCTCTCATTGATGGG+GGG + chr1_3:9571501-9571520 None:intergenic 40.0%
TCAGGAAACTCTTGGATATG+TGG - chr1_3:9571647-9571666 Msa0102750:intron 40.0%
GTACTCCTATGCATGTAACA+TGG - chr1_3:9571825-9571844 Msa0102750:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + chr1_3:9572060-9572079 None:intergenic 40.0%
CCAGAGTAGTACTTCTTGTG+TGG + chr1_3:9568023-9568042 None:intergenic 45.0%
!! CCACACAAGAAGTACTACTC+TGG - chr1_3:9568020-9568039 Msa0102750:three_prime_UTR 45.0%
! TCTCTGCCACCAACTTTTCA+AGG - chr1_3:9568999-9569018 Msa0102750:intron 45.0%
CGATTACGGTCCGCTAAATA+TGG + chr1_3:9569277-9569296 None:intergenic 45.0%
GCGCATAATGTTGAAGCCTT+TGG - chr1_3:9569394-9569413 Msa0102750:CDS 45.0%
GCAGATGCAATGTCTATTCC+TGG - chr1_3:9569590-9569609 Msa0102750:intron 45.0%
ATTTGCACCTGTAAGGCCTT+AGG + chr1_3:9569964-9569983 None:intergenic 45.0%
GGCCTTACAGGTGCAAATAA+TGG - chr1_3:9569966-9569985 Msa0102750:CDS 45.0%
AGGGCCATGAAAAAACCAGT+TGG - chr1_3:9570093-9570112 Msa0102750:intron 45.0%
GTTTGGAAAGGCTGAGAAGA+TGG - chr1_3:9570671-9570690 Msa0102750:intron 45.0%
AGAAGACACAGAAAAGGCTC+CGG - chr1_3:9570866-9570885 Msa0102750:intron 45.0%
AAAAGCAAACCACCACTAGC+AGG + chr1_3:9570900-9570919 None:intergenic 45.0%
GCGGCTTATATTTAAAGGCG+AGG - chr1_3:9570977-9570996 Msa0102750:CDS 45.0%
AGGCGAGGAAAGAAAAACCA+AGG - chr1_3:9570992-9571011 Msa0102750:CDS 45.0%
AACTTGCCGCACAAGTAAAC+TGG + chr1_3:9571261-9571280 None:intergenic 45.0%
!! AAACTCTAAAACACCGGACG+CGG + chr1_3:9571358-9571377 None:intergenic 45.0%
TGGCAATTGTGCAGCATGTA+AGG - chr1_3:9571424-9571443 Msa0102750:intron 45.0%
GTGAGCTTAACTCAGTTGGT+AGG + chr1_3:9572061-9572080 None:intergenic 45.0%
TGGATTGCGAGCAACAGTTC+AGG - chr1_3:9569215-9569234 Msa0102750:CDS 50.0%
TTTGTGGCCTAAGGCCTTAC+AGG - chr1_3:9569954-9569973 Msa0102750:CDS 50.0%
CCACGTGACTTCTCATTCTC+AGG + chr1_3:9570786-9570805 None:intergenic 50.0%
CCTGAGAATGAGAAGTCACG+TGG - chr1_3:9570783-9570802 Msa0102750:intron 50.0%
GTCACGTGGAGAGCTTATTG+TGG - chr1_3:9570797-9570816 Msa0102750:intron 50.0%
ACCACACAAATCCGTTTGCG+CGG - chr1_3:9570958-9570977 Msa0102750:CDS 50.0%
CTCAAATTCATTGCCGCGTC+CGG - chr1_3:9571342-9571361 Msa0102750:intron 50.0%
ATGCAGCAGGCCTAACTTTG+AGG + chr1_3:9571544-9571563 None:intergenic 50.0%
GTGTTACCTTTGGATGCAGC+AGG + chr1_3:9571557-9571576 None:intergenic 50.0%
CCTCGTGAGCTTAACTCAGT+TGG + chr1_3:9572065-9572084 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG - chr1_3:9572062-9572081 Msa0102750:five_prime_UTR 50.0%
GACACAGAAAAGGCTCCGGA+AGG - chr1_3:9570870-9570889 Msa0102750:intron 55.0%
CCACTAGCAGGTGTTCCTTC+CGG + chr1_3:9570888-9570907 None:intergenic 55.0%
GAAGGAACACCTGCTAGTGG+TGG - chr1_3:9570888-9570907 Msa0102750:intron 55.0%
GTTAGGCCTGCTGCATCCAA+AGG - chr1_3:9571548-9571567 Msa0102750:CDS 55.0%
CCGGAAGGAACACCTGCTAG+TGG - chr1_3:9570885-9570904 Msa0102750:intron 60.0%
! GCCGCGCAAACGGATTTGTG+TGG + chr1_3:9570962-9570981 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 9567920 9572223 9567920 ID=Msa0102750;Name=Msa0102750
chr1_3 mRNA 9567920 9572223 9567920 ID=Msa0102750-mRNA-1;Parent=Msa0102750;Name=Msa0102750-mRNA-1;_AED=0.11;_eAED=0.11;_QI=211|1|1|1|0.91|0.84|13|424|535
chr1_3 exon 9567920 9567961 9567920 ID=Msa0102750-mRNA-1:exon:3897;Parent=Msa0102750-mRNA-1
chr1_3 exon 9567982 9568492 9567982 ID=Msa0102750-mRNA-1:exon:3896;Parent=Msa0102750-mRNA-1
chr1_3 exon 9568574 9568705 9568574 ID=Msa0102750-mRNA-1:exon:3895;Parent=Msa0102750-mRNA-1
chr1_3 exon 9569130 9569471 9569130 ID=Msa0102750-mRNA-1:exon:3894;Parent=Msa0102750-mRNA-1
chr1_3 exon 9569802 9570048 9569802 ID=Msa0102750-mRNA-1:exon:3893;Parent=Msa0102750-mRNA-1
chr1_3 exon 9570145 9570221 9570145 ID=Msa0102750-mRNA-1:exon:3892;Parent=Msa0102750-mRNA-1
chr1_3 exon 9570512 9570586 9570512 ID=Msa0102750-mRNA-1:exon:3891;Parent=Msa0102750-mRNA-1
chr1_3 exon 9570677 9570778 9570677 ID=Msa0102750-mRNA-1:exon:3890;Parent=Msa0102750-mRNA-1
chr1_3 exon 9570907 9571025 9570907 ID=Msa0102750-mRNA-1:exon:3889;Parent=Msa0102750-mRNA-1
chr1_3 exon 9571123 9571246 9571123 ID=Msa0102750-mRNA-1:exon:3888;Parent=Msa0102750-mRNA-1
chr1_3 exon 9571345 9571395 9571345 ID=Msa0102750-mRNA-1:exon:3887;Parent=Msa0102750-mRNA-1
chr1_3 exon 9571489 9571587 9571489 ID=Msa0102750-mRNA-1:exon:3886;Parent=Msa0102750-mRNA-1
chr1_3 exon 9571902 9572223 9571902 ID=Msa0102750-mRNA-1:exon:3885;Parent=Msa0102750-mRNA-1
chr1_3 five_prime_UTR 9572013 9572223 9572013 ID=Msa0102750-mRNA-1:five_prime_utr;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9571902 9572012 9571902 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9571489 9571587 9571489 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9571345 9571395 9571345 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9571123 9571246 9571123 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9570907 9571025 9570907 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9570677 9570778 9570677 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9570512 9570586 9570512 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9570145 9570221 9570145 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9569802 9570048 9569802 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9569130 9569471 9569130 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9568574 9568705 9568574 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 CDS 9568364 9568492 9568364 ID=Msa0102750-mRNA-1:cds;Parent=Msa0102750-mRNA-1
chr1_3 three_prime_UTR 9567982 9568363 9567982 ID=Msa0102750-mRNA-1:three_prime_utr;Parent=Msa0102750-mRNA-1
chr1_3 three_prime_UTR 9567920 9567961 9567920 ID=Msa0102750-mRNA-1:three_prime_utr;Parent=Msa0102750-mRNA-1
Gene Sequence

>Msa0102750

ATGAGTATTTTAAGTACTATAGCTAGTTTTTTAGGATTTGGAATTGGAACTTCACTTGGATTGTTGATTGGATACTATATATTTATATACTTTCAATCAATAGATGTCAAGGATCCTACATTTACTCCTTTGGTTGAGCAAGAAGCTAAAACTGTGCAACAATTGCTTCCAGAAATACCCTTATGGATAAAAAATCCAGACTATGACCGTCTTGATTGGCTTAATAAATTTGTTGAGTGTATGTGGCCTTATTTGAACAAGGCAATTTGCAAAACTGCAAGAACTATAGCAAAGCCTATTATTGCTGAACAAATTCCAAAGTACAAAATTGATTCAGTTGAATTTGAAGAACTTAACTTGGGCTCTCTGCCACCAACTTTTCAAGGAATGAAAGTGTATAGCACTGATGAAAAGGAATTGATTATGGAATTATCAATGAAATGGGCTGGGAATCCTAACATTATAGTTGCAGTTAAAGCATTTGGATTGCGAGCAACAGTTCAGGTTGTTGATTTGCAAGTATTTGCTTCTCCGCGCATAATGTTGAAGCCTTTGGTTCCTAGTTTTCCTTGTTTCGCCAATATTTACGTGTCTCTCATGGAAAAGCCACATGTTGATTTTGGATTAAAACTACTTGGAGCAGATGCAATGTCTATTCCTGGTCTTTATAGGATTGTCCAGGAAATTATAAAAGATCAGGTTGCAAAAATGTATTTGTGGCCTAAGGCCTTACAGGTGCAAATAATGGATCCATCACAGGCCATGAAAAAACCAGTTGGAATTCTTCATGTGAAGATTCTGAAAGCAGTGAAGCTTAGAAAGAAAGATATAATGGGAGGAGCAGACCCTTATGTGAAACTTAAACTCAAAGATGATAAACTTGCTTCAAAGAAAACAACTGTGAAGTACAAGAACTTGAATCCAGAATGGAATGAAGAGTTTAATGTGGTGATTAAAGATCCAGAATCTCAAAACTTAATGCTTAATGTTTATGATTGGGAACAGTTTGGAAAGGCTGAGAAGATGGGTATGAATGTAATTCCATTGAAAGAGCTTACACCAAATGAACCAAAACTACTTACTCTTAAATTACTCAAGACACTTGTACCTAATGATCCTGAGAATGAGAAGTCACGTGGAGAGCTTATTGTGGAAGTTATGTACAAACCTTTTAAGGATGATGAGTTATCTAAGAATTCAGAAGACACAGAAAAGGCTCCGGAAGGAACACCTGCTAGTGGTGGTTTGCTTTTGATTAGCATCCATGAAGCTGAAGATGTTGAAGGAAAACACCACACAAATCCGTTTGCGCGGCTTATATTTAAAGGCGAGGAAAGAAAAACCAAGCATGTAAGGAAAAATAGAGATCCAAGATGGGGTGAAACATTTCAATTTACGCTAGAGGAACCCCCCATCAATGAGAGACTTTATGTTGAAGTGATAAGTGCATCCTCAAAGTTAGGCCTGCTGCATCCAAAGGAAACTCTTGGATATGTGGATATAAATTTATCTGATGTTGTTAGCAACAAAAGAATCAATGAGAAGTATCATCTTATTGACTCCAAAAATGGAAAGATTCAAATTGAGCTTCAGTGGAGAACCCCATAA

Protein sequence

>Msa0102750

MSILSTIASFLGFGIGTSLGLLIGYYIFIYFQSIDVKDPTFTPLVEQEAKTVQQLLPEIPLWIKNPDYDRLDWLNKFVECMWPYLNKAICKTARTIAKPIIAEQIPKYKIDSVEFEELNLGSLPPTFQGMKVYSTDEKELIMELSMKWAGNPNIIVAVKAFGLRATVQVVDLQVFASPRIMLKPLVPSFPCFANIYVSLMEKPHVDFGLKLLGADAMSIPGLYRIVQEIIKDQVAKMYLWPKALQVQIMDPSQAMKKPVGILHVKILKAVKLRKKDIMGGADPYVKLKLKDDKLASKKTTVKYKNLNPEWNEEFNVVIKDPESQNLMLNVYDWEQFGKAEKMGMNVIPLKELTPNEPKLLTLKLLKTLVPNDPENEKSRGELIVEVMYKPFKDDELSKNSEDTEKAPEGTPASGGLLLISIHEAEDVEGKHHTNPFARLIFKGEERKTKHVRKNRDPRWGETFQFTLEEPPINERLYVEVISASSKLGLLHPKETLGYVDINLSDVVSNKRINEKYHLIDSKNGKIQIELQWRTP*