AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0105420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0105420 MtrunA17_Chr1g0160301 96.257 374 2 1 1 362 1 374 0.0 731
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0105420 AT2G01350.1 76.271 354 72 2 9 362 7 348 0.0 552
Msa0105420 AT2G01350.4 81.587 315 58 0 48 362 13 327 0.0 543
Msa0105420 AT2G01350.3 75.141 354 70 3 9 362 7 342 0.0 535
Msa0105420 AT2G01350.2 82.562 281 49 0 82 362 1 281 4.19e-174 485

Find 109 sgRNAs with CRISPR-Local

Find 1040 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAACTGTAGTCCTTTA+TGG 0.108217 1_3:+13909550 None:intergenic
ACGCGGCATATGCCTTATTT+TGG 0.179852 1_3:-13904797 Msa0105420:three_prime_UTR
TCGAATAATGCTGGATAATA+TGG 0.220541 1_3:-13906203 Msa0105420:CDS
TGAGGTTGATCCTTCTTTAA+AGG 0.228429 1_3:-13909687 Msa0105420:intron
TTCCTTGTATAGGTATTAAT+TGG 0.238723 1_3:-13908599 Msa0105420:intron
TCATCAGAGACATAACTTCT+AGG 0.245689 1_3:-13911809 Msa0105420:CDS
ATTCCTCACAACCTTGAATT+AGG 0.247347 1_3:-13911908 Msa0105420:five_prime_UTR
ATAAGCATTGCTTTCAGAAT+TGG 0.263769 1_3:-13904599 Msa0105420:three_prime_UTR
GTGGAGTAACCTACATTTCT+AGG 0.319411 1_3:-13905228 Msa0105420:intron
TCAGGTGGAGTGGTCTAAAA+AGG 0.321341 1_3:-13909586 Msa0105420:intron
TCGTATTAGATTCCAAAATA+AGG 0.329656 1_3:+13904785 None:intergenic
AAAAGCTGTTGACCTGTATC+TGG 0.332775 1_3:-13908486 Msa0105420:CDS
AAATAATATATATAGCATTT+AGG 0.336071 1_3:-13904735 Msa0105420:three_prime_UTR
GCAGAAGATGCTGGGGATCT+AGG 0.339591 1_3:-13910002 Msa0105420:intron
AAGGAGGATGGCATCGTTGC+TGG 0.343013 1_3:-13909737 Msa0105420:CDS
CACTAACCTATGTATGAGTA+TGG 0.346327 1_3:-13904499 Msa0105420:three_prime_UTR
GGAAGTGGAAGCTTATTTCT+TGG 0.353991 1_3:-13909762 Msa0105420:CDS
GTCCATAAAGGACTACAGTT+TGG 0.357513 1_3:-13909552 Msa0105420:CDS
AATGGGTGGAGTGGAGTAAC+TGG 0.359571 1_3:-13912029 Msa0105420:five_prime_UTR
TGCTCCGTGTTTACGTTTGT+TGG 0.360433 1_3:-13908726 Msa0105420:CDS
AAAAGATGTGTCCTAATTCA+AGG 0.364257 1_3:+13911897 None:intergenic
TTGGCCATCAATTTGCTAGA+TGG 0.376886 1_3:-13904655 Msa0105420:three_prime_UTR
CACACACTAATGACCAATAA+TGG 0.380059 1_3:-13912102 None:intergenic
CCTCAAAATTGATACTGAAT+TGG 0.380529 1_3:-13904894 Msa0105420:CDS
TCAACATCTCCGTTTGATAA+AGG 0.380628 1_3:+13906175 None:intergenic
ATAGATACAGTACATAAAAT+CGG 0.383450 1_3:-13905256 Msa0105420:CDS
ATATCATAATCAAGCTCTTC+CGG 0.389803 1_3:+13904850 None:intergenic
TTTCTTATATCATTCCTTGC+CGG 0.391938 1_3:-13904828 Msa0105420:three_prime_UTR
GCATCCTACTTATGATTTGA+AGG 0.401374 1_3:-13910045 Msa0105420:CDS
TATTTGTGAATCCAGGCTTC+AGG 0.405459 1_3:-13905289 Msa0105420:intron
GCCACCATCTAGCAAATTGA+TGG 0.420624 1_3:+13904651 None:intergenic
TTCTTTAACTCGAATAATGC+TGG 0.425179 1_3:-13906212 Msa0105420:CDS
TTGGCTCTTGCAGAAGATGC+TGG 0.429505 1_3:-13910011 Msa0105420:CDS
GTGGCTAGAATGACTAAGTT+AGG 0.430644 1_3:-13904633 Msa0105420:three_prime_UTR
GAAGCTGTGCGGTTGGTCAA+TGG 0.438267 1_3:-13906136 Msa0105420:CDS
TTTGAAGGGCATTATAAAGT+TGG 0.445902 1_3:-13910030 Msa0105420:CDS
AAGCTGTGCGGTTGGTCAAT+GGG 0.445964 1_3:-13906135 Msa0105420:CDS
AGCATCGCCTGCATATATAT+TGG 0.446995 1_3:-13908762 Msa0105420:CDS
ACTGAATTGGCGCTTAAAGT+TGG 0.451185 1_3:-13904881 Msa0105420:CDS
GTTTACGTTTGTTGGATAAG+TGG 0.454989 1_3:-13908718 Msa0105420:CDS
TTGCTTCATACCTTTAAAGA+AGG 0.458741 1_3:+13909677 None:intergenic
GCTTCCACTTCCATGTCAAA+TGG 0.464861 1_3:+13909773 None:intergenic
AAAACTTTACCTAGAAATGT+AGG 0.470300 1_3:+13905219 None:intergenic
TTATGCATCTAATAATTTGT+GGG 0.471517 1_3:-13904452 None:intergenic
TTTATGCATCTAATAATTTG+TGG 0.472504 1_3:-13904453 None:intergenic
TTTACGTTTGTTGGATAAGT+GGG 0.473302 1_3:-13908717 Msa0105420:CDS
CTAGTCTCCAATATATATGC+AGG 0.474951 1_3:+13908755 None:intergenic
TGACAAGTAACCTTGTTTGT+AGG 0.476126 1_3:+13911845 None:intergenic
CTACCTCAACCTCCAATTGA+AGG 0.479255 1_3:+13908453 None:intergenic
CTTGTATAGGTATTAATTGG+TGG 0.481768 1_3:-13908596 Msa0105420:intron
TAGCCTTCAATTGGAGGTTG+AGG 0.484455 1_3:-13908456 Msa0105420:intron
CATCCTACTTATGATTTGAA+GGG 0.486121 1_3:-13910044 Msa0105420:CDS
GACTAGGACTCTTGAGGAAG+TGG 0.488980 1_3:-13906269 Msa0105420:CDS
TGGCTCTTGCAGAAGATGCT+GGG 0.489155 1_3:-13910010 Msa0105420:CDS
TGCAGAGATGATATTTAATG+AGG 0.494921 1_3:-13909705 Msa0105420:CDS
TAACATTGTTGTAGCTGAAA+GGG 0.499902 1_3:-13909393 Msa0105420:CDS
TGTGTTTCATTACTTCATGA+AGG 0.510389 1_3:+13904762 None:intergenic
ATGGTTGTACCTTTATCAAA+CGG 0.511127 1_3:-13906184 Msa0105420:CDS
GATAATCATATATCAACAGC+TGG 0.512224 1_3:-13908527 Msa0105420:CDS
CATTCCATTTGACATGGAAG+TGG 0.517963 1_3:-13909777 Msa0105420:CDS
ATAACATTGTTGTAGCTGAA+AGG 0.525165 1_3:-13909394 Msa0105420:CDS
AGCTTATTTCTTGGCGAAGG+AGG 0.525562 1_3:-13909753 Msa0105420:CDS
GTTATGTCTCTGATGAGAAA+TGG 0.526067 1_3:+13911816 None:intergenic
AATTGGCGCTTAAAGTTGGA+AGG 0.528440 1_3:-13904877 Msa0105420:CDS
TAGATACAGTACATAAAATC+GGG 0.531386 1_3:-13905255 Msa0105420:CDS
TATAGGTGATATAACATGCT+TGG 0.532134 1_3:-13909804 Msa0105420:intron
CACTTCCATGTCAAATGGAA+TGG 0.532228 1_3:+13909778 None:intergenic
TGGAGGACGAAATCATAGAA+TGG 0.532624 1_3:-13908576 Msa0105420:CDS
TATTTCTTGGCGAAGGAGGA+TGG 0.532732 1_3:-13909749 Msa0105420:CDS
ATCTTACCATACTCATACAT+AGG 0.533470 1_3:+13904493 None:intergenic
GGAGGACGAAATCATAGAAT+GGG 0.538882 1_3:-13908575 Msa0105420:CDS
CTTAAAGTTGGAAGGCGCAC+CGG 0.542235 1_3:-13904869 Msa0105420:CDS
GCCATCAATTTGCTAGATGG+TGG 0.549986 1_3:-13904652 Msa0105420:three_prime_UTR
TGCGAAAAGTAGAAACGAAT+GGG 0.553403 1_3:-13912046 Msa0105420:five_prime_UTR
AACTTTATGCAGAGGATGAG+TGG 0.553734 1_3:-13909362 Msa0105420:CDS
ATGCCCTTCAAATCATAAGT+AGG 0.554178 1_3:+13910041 None:intergenic
CTAGGTTTCCACCTCCACTC+AGG 0.556808 1_3:-13911791 Msa0105420:intron
TAGAATGGGTTTGTTTGACA+TGG 0.558081 1_3:-13908561 Msa0105420:CDS
TTGCGAAAAGTAGAAACGAA+TGG 0.559486 1_3:-13912047 Msa0105420:five_prime_UTR
CTACAGTTTGGAAAAGTTCG+TGG 0.563333 1_3:-13909540 Msa0105420:intron
GGAAGCTTATTTCTTGGCGA+AGG 0.572983 1_3:-13909756 Msa0105420:CDS
AAATCATAAGTAGGATGCAA+AGG 0.574927 1_3:+13910050 None:intergenic
CTTTGAAATATCAGGTGGAG+TGG 0.579489 1_3:-13909596 Msa0105420:intron
GTATAGGTATTAATTGGTGG+AGG 0.583098 1_3:-13908593 Msa0105420:intron
ATATGCCGCGTAGTGAAGAC+CGG 0.584564 1_3:+13904809 None:intergenic
GGCTCTTGCAGAAGATGCTG+GGG 0.588390 1_3:-13910009 Msa0105420:CDS
ATGTTTCTTACCTACAAACA+AGG 0.597208 1_3:-13911855 Msa0105420:CDS
TGGCATTGCAACTTTAACCA+AGG 0.597429 1_3:-13909342 Msa0105420:intron
GGCCACCATTCCATTTGACA+TGG 0.598004 1_3:-13909783 Msa0105420:CDS
TTCCATGTCAAATGGAATGG+TGG 0.599989 1_3:+13909781 None:intergenic
CAAAGGAGGCTTTACTGCAA+AGG 0.601034 1_3:+13910067 None:intergenic
GTAGAAACGAATGGGTGGAG+TGG 0.603208 1_3:-13912038 Msa0105420:five_prime_UTR
GCTGAAAGAAGCTGTGCGGT+TGG 0.613125 1_3:-13906143 Msa0105420:CDS
ATGGGTGGAGTGGAGTAACT+GGG 0.626240 1_3:-13912028 Msa0105420:five_prime_UTR
CAATGGGAGATTTGAAACTG+AGG 0.629104 1_3:-13906119 Msa0105420:intron
GGTTGAGACTAGGACTCTTG+AGG 0.629180 1_3:-13906275 Msa0105420:CDS
TAGTGCTAAACTTTATGCAG+AGG 0.631286 1_3:-13909370 Msa0105420:CDS
TGTCCTAATTCAAGGTTGTG+AGG 0.637627 1_3:+13911905 None:intergenic
GTACATAAAATCGGGCAAAG+TGG 0.642028 1_3:-13905247 Msa0105420:CDS
AAGGACTCGTATGAGATCGT+CGG 0.643661 1_3:+13910086 None:intergenic
TCATAAGTAGGATGCAAAGG+AGG 0.644964 1_3:+13910053 None:intergenic
ACGTTTGTTGGATAAGTGGG+CGG 0.647258 1_3:-13908714 Msa0105420:intron
TTATCCAACAAACGTAAACA+CGG 0.659218 1_3:+13908722 None:intergenic
AATCATATATCAACAGCTGG+AGG 0.664583 1_3:-13908524 Msa0105420:CDS
TCTCTGATGAGAAATGGTTG+AGG 0.695505 1_3:+13911822 None:intergenic
CCGCGTAGTGAAGACCGGCA+AGG 0.705909 1_3:+13904814 None:intergenic
CCTTGCCGGTCTTCACTACG+CGG 0.714847 1_3:-13904814 Msa0105420:three_prime_UTR
GAAAAGTAGAAACGAATGGG+TGG 0.736388 1_3:-13912043 Msa0105420:five_prime_UTR
CTATGCTGAAAGAAGCTGTG+CGG 0.758489 1_3:-13906147 Msa0105420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAATATAAATAAA+TGG + chr1_3:13907892-13907911 None:intergenic 0.0%
!! AATAAAAAATAAAATAAAAA+TGG + chr1_3:13908198-13908217 None:intergenic 0.0%
!! TATAAAAAAATATAAATAAA+TGG + chr1_3:13907892-13907911 None:intergenic 0.0%
!! AATAAAAAATAAAATAAAAA+TGG + chr1_3:13908198-13908217 None:intergenic 0.0%
!!! ATTATTTTTATAAACTATCT+TGG + chr1_3:13904997-13905016 None:intergenic 10.0%
!!! ATATTAAATTTTGAAGAAAA+CGG + chr1_3:13907252-13907271 None:intergenic 10.0%
!!! TTAAGTTTTAAGAATAAATA+GGG + chr1_3:13908529-13908548 None:intergenic 10.0%
!!! TTAAGTTTTAAGAATAAATA+GGG + chr1_3:13908529-13908548 None:intergenic 10.0%
!! AAATAATATATATAGCATTT+AGG - chr1_3:13911807-13911826 Msa0105420:CDS 10.0%
!!! ATTATTTTTATAAACTATCT+TGG + chr1_3:13904997-13905016 None:intergenic 10.0%
!!! ATATTAAATTTTGAAGAAAA+CGG + chr1_3:13907252-13907271 None:intergenic 10.0%
!!! TTAAGTTTTAAGAATAAATA+GGG + chr1_3:13908529-13908548 None:intergenic 10.0%
!!! TTAAGTTTTAAGAATAAATA+GGG + chr1_3:13908529-13908548 None:intergenic 10.0%
!! AAATAATATATATAGCATTT+AGG - chr1_3:13911807-13911826 Msa0105420:CDS 10.0%
!! GGAAAAATAAATATATAACT+TGG - chr1_3:13905722-13905741 Msa0105420:intron 15.0%
!!! TTTTTAATTGATTTTGTGAA+AGG - chr1_3:13907085-13907104 Msa0105420:intron 15.0%
!! ATATTGTATGATGTTTATAA+AGG - chr1_3:13907268-13907287 Msa0105420:intron 15.0%
!! ATATAATAATGAACAAATCA+CGG - chr1_3:13907596-13907615 Msa0105420:intron 15.0%
!! TGATAAATATAAGATAACAA+TGG + chr1_3:13907716-13907735 None:intergenic 15.0%
!! AAATTATTCATTAAGAATCA+GGG + chr1_3:13908151-13908170 None:intergenic 15.0%
!! AAAATTATTCATTAAGAATC+AGG + chr1_3:13908152-13908171 None:intergenic 15.0%
!! TGATATAGAAGAATAAAATA+GGG - chr1_3:13908385-13908404 Msa0105420:intron 15.0%
!! ATATTATTCTGTAATCAAAA+GGG + chr1_3:13908416-13908435 None:intergenic 15.0%
!! AATATTATTCTGTAATCAAA+AGG + chr1_3:13908417-13908436 None:intergenic 15.0%
!!! TAAGTTTTAAGAATAAATAG+GGG + chr1_3:13908528-13908547 None:intergenic 15.0%
!!! GTTAAGTTTTAAGAATAAAT+AGG + chr1_3:13908530-13908549 None:intergenic 15.0%
!!! TATTTTTGAGAAAAAAATAC+AGG - chr1_3:13908810-13908829 Msa0105420:intron 15.0%
!! ATATTATTCTGTAATCAAAA+GGG + chr1_3:13908416-13908435 None:intergenic 15.0%
!! AATATTATTCTGTAATCAAA+AGG + chr1_3:13908417-13908436 None:intergenic 15.0%
!!! TAAGTTTTAAGAATAAATAG+GGG + chr1_3:13908528-13908547 None:intergenic 15.0%
!!! GTTAAGTTTTAAGAATAAAT+AGG + chr1_3:13908530-13908549 None:intergenic 15.0%
!! AACAATATATTGTTAGATAT+AGG - chr1_3:13909722-13909741 Msa0105420:CDS 15.0%
!! AAATACAAATGATAATTCTA+TGG + chr1_3:13910044-13910063 None:intergenic 15.0%
!!! AAAATAGAAATTTTTTGTGA+AGG - chr1_3:13910970-13910989 Msa0105420:intron 15.0%
!!! TATCTAATCGTTTTTTTATT+TGG - chr1_3:13911133-13911152 Msa0105420:intron 15.0%
!!! TTATTTTGATATCTTGAATT+TGG - chr1_3:13911169-13911188 Msa0105420:intron 15.0%
!! TAATATTATAAACCATATGT+TGG - chr1_3:13911473-13911492 Msa0105420:intron 15.0%
!! GGAAAAATAAATATATAACT+TGG - chr1_3:13905722-13905741 Msa0105420:intron 15.0%
!!! TTTTTAATTGATTTTGTGAA+AGG - chr1_3:13907085-13907104 Msa0105420:intron 15.0%
!! ATATTGTATGATGTTTATAA+AGG - chr1_3:13907268-13907287 Msa0105420:intron 15.0%
!! ATATAATAATGAACAAATCA+CGG - chr1_3:13907596-13907615 Msa0105420:intron 15.0%
!! TGATAAATATAAGATAACAA+TGG + chr1_3:13907716-13907735 None:intergenic 15.0%
!! AAATTATTCATTAAGAATCA+GGG + chr1_3:13908151-13908170 None:intergenic 15.0%
!! AAAATTATTCATTAAGAATC+AGG + chr1_3:13908152-13908171 None:intergenic 15.0%
!! TGATATAGAAGAATAAAATA+GGG - chr1_3:13908385-13908404 Msa0105420:intron 15.0%
!! ATATTATTCTGTAATCAAAA+GGG + chr1_3:13908416-13908435 None:intergenic 15.0%
!! AATATTATTCTGTAATCAAA+AGG + chr1_3:13908417-13908436 None:intergenic 15.0%
!!! TAAGTTTTAAGAATAAATAG+GGG + chr1_3:13908528-13908547 None:intergenic 15.0%
!!! GTTAAGTTTTAAGAATAAAT+AGG + chr1_3:13908530-13908549 None:intergenic 15.0%
!!! TATTTTTGAGAAAAAAATAC+AGG - chr1_3:13908810-13908829 Msa0105420:intron 15.0%
!! ATATTATTCTGTAATCAAAA+GGG + chr1_3:13908416-13908435 None:intergenic 15.0%
!! AATATTATTCTGTAATCAAA+AGG + chr1_3:13908417-13908436 None:intergenic 15.0%
!!! TAAGTTTTAAGAATAAATAG+GGG + chr1_3:13908528-13908547 None:intergenic 15.0%
!!! GTTAAGTTTTAAGAATAAAT+AGG + chr1_3:13908530-13908549 None:intergenic 15.0%
!! AACAATATATTGTTAGATAT+AGG - chr1_3:13909722-13909741 Msa0105420:CDS 15.0%
!! AAATACAAATGATAATTCTA+TGG + chr1_3:13910044-13910063 None:intergenic 15.0%
!!! AAAATAGAAATTTTTTGTGA+AGG - chr1_3:13910970-13910989 Msa0105420:intron 15.0%
!!! TATCTAATCGTTTTTTTATT+TGG - chr1_3:13911133-13911152 Msa0105420:intron 15.0%
!!! TTATTTTGATATCTTGAATT+TGG - chr1_3:13911169-13911188 Msa0105420:intron 15.0%
!! TAATATTATAAACCATATGT+TGG - chr1_3:13911473-13911492 Msa0105420:intron 15.0%
!! AAAAACAAAAATGTTGAATG+AGG + chr1_3:13904789-13904808 None:intergenic 20.0%
!! ATAAGAGAAACTATTAAGAA+AGG - chr1_3:13905186-13905205 Msa0105420:intron 20.0%
!! AAACACATATTTCAAAAGTA+TGG - chr1_3:13905701-13905720 Msa0105420:intron 20.0%
!!! TCCAACTCATTTTTAAAATA+TGG - chr1_3:13906070-13906089 Msa0105420:intron 20.0%
!!! ACCATATTTTAAAAATGAGT+TGG + chr1_3:13906074-13906093 None:intergenic 20.0%
!! ATGCTTAAGTATAAATCTAT+TGG - chr1_3:13906204-13906223 Msa0105420:CDS 20.0%
!!! ATAAGAAATGTTTTGACTAT+AGG - chr1_3:13906721-13906740 Msa0105420:intron 20.0%
!! ATTGAATTGAAATGGTTAAA+AGG - chr1_3:13907346-13907365 Msa0105420:intron 20.0%
!! TATTGATAAAAAAATGGATG+AGG + chr1_3:13907579-13907598 None:intergenic 20.0%
!! ATGTATAAAAATGAAAGGAA+TGG + chr1_3:13907867-13907886 None:intergenic 20.0%
!! TTGTTGTGAAATCTATTAAA+GGG + chr1_3:13908221-13908240 None:intergenic 20.0%
!!! CAATTATATAAAGCTTTGTT+AGG + chr1_3:13908342-13908361 None:intergenic 20.0%
!!! CTAACAAAGCTTTATATAAT+TGG - chr1_3:13908340-13908359 Msa0105420:intron 20.0%
!!! TTTTATTCTTCTATATCAGT+TGG + chr1_3:13908383-13908402 None:intergenic 20.0%
!! CTGATATAGAAGAATAAAAT+AGG - chr1_3:13908384-13908403 Msa0105420:intron 20.0%
!! TAATTAATTAAGTCAGTAGT+GGG + chr1_3:13908555-13908574 None:intergenic 20.0%
!! ATAATTAATTAAGTCAGTAG+TGG + chr1_3:13908556-13908575 None:intergenic 20.0%
!! TAATTAATTAAGTCAGTAGT+GGG + chr1_3:13908555-13908574 None:intergenic 20.0%
!! ATAATTAATTAAGTCAGTAG+TGG + chr1_3:13908556-13908575 None:intergenic 20.0%
!! GAGATTATTGCATAATAATA+AGG + chr1_3:13910014-13910033 None:intergenic 20.0%
!! ATGATAATTCTATGGTATTT+GGG + chr1_3:13910036-13910055 None:intergenic 20.0%
!! AATGATAATTCTATGGTATT+TGG + chr1_3:13910037-13910056 None:intergenic 20.0%
!! TAAATGAATATGTTAGATAC+TGG + chr1_3:13910080-13910099 None:intergenic 20.0%
!! TTTATTGAAACTAGAGAAAA+TGG + chr1_3:13911024-13911043 None:intergenic 20.0%
!! ATAGATACAGTACATAAAAT+CGG - chr1_3:13911286-13911305 Msa0105420:intron 20.0%
!! AAAAACAAAAATGTTGAATG+AGG + chr1_3:13904789-13904808 None:intergenic 20.0%
!! ATAAGAGAAACTATTAAGAA+AGG - chr1_3:13905186-13905205 Msa0105420:intron 20.0%
!! AAACACATATTTCAAAAGTA+TGG - chr1_3:13905701-13905720 Msa0105420:intron 20.0%
!!! TCCAACTCATTTTTAAAATA+TGG - chr1_3:13906070-13906089 Msa0105420:intron 20.0%
!!! ACCATATTTTAAAAATGAGT+TGG + chr1_3:13906074-13906093 None:intergenic 20.0%
!! ATGCTTAAGTATAAATCTAT+TGG - chr1_3:13906204-13906223 Msa0105420:CDS 20.0%
!!! ATAAGAAATGTTTTGACTAT+AGG - chr1_3:13906721-13906740 Msa0105420:intron 20.0%
!! ATTGAATTGAAATGGTTAAA+AGG - chr1_3:13907346-13907365 Msa0105420:intron 20.0%
!! TATTGATAAAAAAATGGATG+AGG + chr1_3:13907579-13907598 None:intergenic 20.0%
!! ATGTATAAAAATGAAAGGAA+TGG + chr1_3:13907867-13907886 None:intergenic 20.0%
!! TTGTTGTGAAATCTATTAAA+GGG + chr1_3:13908221-13908240 None:intergenic 20.0%
!!! CAATTATATAAAGCTTTGTT+AGG + chr1_3:13908342-13908361 None:intergenic 20.0%
!!! CTAACAAAGCTTTATATAAT+TGG - chr1_3:13908340-13908359 Msa0105420:intron 20.0%
!!! TTTTATTCTTCTATATCAGT+TGG + chr1_3:13908383-13908402 None:intergenic 20.0%
!! CTGATATAGAAGAATAAAAT+AGG - chr1_3:13908384-13908403 Msa0105420:intron 20.0%
!! TAATTAATTAAGTCAGTAGT+GGG + chr1_3:13908555-13908574 None:intergenic 20.0%
!! ATAATTAATTAAGTCAGTAG+TGG + chr1_3:13908556-13908575 None:intergenic 20.0%
!! TAATTAATTAAGTCAGTAGT+GGG + chr1_3:13908555-13908574 None:intergenic 20.0%
!! ATAATTAATTAAGTCAGTAG+TGG + chr1_3:13908556-13908575 None:intergenic 20.0%
!! GAGATTATTGCATAATAATA+AGG + chr1_3:13910014-13910033 None:intergenic 20.0%
!! ATGATAATTCTATGGTATTT+GGG + chr1_3:13910036-13910055 None:intergenic 20.0%
!! AATGATAATTCTATGGTATT+TGG + chr1_3:13910037-13910056 None:intergenic 20.0%
!! TAAATGAATATGTTAGATAC+TGG + chr1_3:13910080-13910099 None:intergenic 20.0%
!! TTTATTGAAACTAGAGAAAA+TGG + chr1_3:13911024-13911043 None:intergenic 20.0%
!! ATAGATACAGTACATAAAAT+CGG - chr1_3:13911286-13911305 Msa0105420:intron 20.0%
!! AGTATTTTATACCTGAGTTT+AGG + chr1_3:13904887-13904906 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG + chr1_3:13905177-13905196 None:intergenic 25.0%
! AGGTTTAGATATTAATGAGT+TGG - chr1_3:13905206-13905225 Msa0105420:intron 25.0%
! GTTCTATCATAAACCATATT+TGG + chr1_3:13905234-13905253 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr1_3:13905238-13905257 Msa0105420:CDS 25.0%
! ATTGAGTTAGCATTTATCAT+TGG - chr1_3:13905469-13905488 Msa0105420:intron 25.0%
! TTGTCATAGATATCAACAAA+GGG + chr1_3:13905643-13905662 None:intergenic 25.0%
!!! ACTTTTGAAATATGTGTTTG+TGG + chr1_3:13905700-13905719 None:intergenic 25.0%
! TGGTAATAAAACTGATTGTT+CGG - chr1_3:13905742-13905761 Msa0105420:intron 25.0%
! AAAAATTAGCTATCCAGATT+TGG + chr1_3:13905844-13905863 None:intergenic 25.0%
!! ATAGTTTTTACTATACGCTT+TGG + chr1_3:13905944-13905963 None:intergenic 25.0%
! AAAGCGTATAGTAAAAACTA+TGG - chr1_3:13905943-13905962 Msa0105420:intron 25.0%
! AAACCACAAATATTCTGATA+GGG + chr1_3:13906901-13906920 None:intergenic 25.0%
! AAAACCACAAATATTCTGAT+AGG + chr1_3:13906902-13906921 None:intergenic 25.0%
!! AGAATATTTGTGGTTTTTCT+TGG - chr1_3:13906905-13906924 Msa0105420:intron 25.0%
! AACTTAATTACGAAAGCAAA+TGG - chr1_3:13907044-13907063 Msa0105420:intron 25.0%
! TGAAGAACATAAAAATACCT+TGG + chr1_3:13907220-13907239 None:intergenic 25.0%
! TGTTTATAAAGGTTCTTGTA+AGG - chr1_3:13907279-13907298 Msa0105420:intron 25.0%
! AACGATTCACAGTTAATTAT+TGG - chr1_3:13907310-13907329 Msa0105420:intron 25.0%
!! TTTATCGTAAGAGAAGTTTT+AGG - chr1_3:13907484-13907503 Msa0105420:intron 25.0%
! AATTCAGATTGAGTAAAAGA+TGG - chr1_3:13907650-13907669 Msa0105420:intron 25.0%
! TGGTCATGTATAAAAATGAA+AGG + chr1_3:13907872-13907891 None:intergenic 25.0%
!!! TATTGTTGATTTCCTTGTAT+AGG - chr1_3:13907933-13907952 Msa0105420:intron 25.0%
! TTCCTTGTATAGGTATTAAT+TGG - chr1_3:13907943-13907962 Msa0105420:intron 25.0%
! GTTGTTGTGAAATCTATTAA+AGG + chr1_3:13908222-13908241 None:intergenic 25.0%
! AGTAGTTAATTATGCAGTTA+TGG + chr1_3:13908600-13908619 None:intergenic 25.0%
!! GTCATTATACTTCAAGTTAT+GGG + chr1_3:13908732-13908751 None:intergenic 25.0%
!! TGTCATTATACTTCAAGTTA+TGG + chr1_3:13908733-13908752 None:intergenic 25.0%
! TGCAATAAAGAAATGAGTAT+GGG + chr1_3:13908881-13908900 None:intergenic 25.0%
! TTGCAATAAAGAAATGAGTA+TGG + chr1_3:13908882-13908901 None:intergenic 25.0%
!!! ATTTATTTGGCGTTTTAAAC+CGG + chr1_3:13909164-13909183 None:intergenic 25.0%
! AGTAGTTAATTATGCAGTTA+TGG + chr1_3:13908600-13908619 None:intergenic 25.0%
! GATTATAAATAAAGATGCAG+AGG - chr1_3:13909860-13909879 Msa0105420:intron 25.0%
! ATAAGAAAGTAACTGTAGAA+AGG + chr1_3:13909964-13909983 None:intergenic 25.0%
! TTAAAATGCCATTAAATGGA+CGG + chr1_3:13910112-13910131 None:intergenic 25.0%
!! TCCATTTAATGGCATTTTAA+TGG - chr1_3:13910112-13910131 Msa0105420:CDS 25.0%
! TTAACCTGTATCGTATTATT+CGG - chr1_3:13910469-13910488 Msa0105420:intron 25.0%
! TAGAAATAAAAACAGTGTGT+TGG + chr1_3:13910592-13910611 None:intergenic 25.0%
! AACAGACAAAAACAAAAACA+TGG + chr1_3:13910615-13910634 None:intergenic 25.0%
! AAAGAAGGAAAAGTTAGTTA+AGG - chr1_3:13910874-13910893 Msa0105420:intron 25.0%
! TAAGAAACAAACAAGTTCAA+AGG + chr1_3:13911110-13911129 None:intergenic 25.0%
! TAGATACAGTACATAAAATC+GGG - chr1_3:13911287-13911306 Msa0105420:intron 25.0%
! AAAACTTTACCTAGAAATGT+AGG + chr1_3:13911326-13911345 None:intergenic 25.0%
! ACAATACATGTAGAAATTGA+AGG + chr1_3:13911396-13911415 None:intergenic 25.0%
! AAAATTTCATTGCTCTGATA+TGG - chr1_3:13911575-13911594 Msa0105420:intron 25.0%
! AAATTTCATTGCTCTGATAT+GGG - chr1_3:13911576-13911595 Msa0105420:intron 25.0%
!! CAATTCAGTATCAATTTTGA+GGG + chr1_3:13911650-13911669 None:intergenic 25.0%
! TCGTATTAGATTCCAAAATA+AGG + chr1_3:13911760-13911779 None:intergenic 25.0%
!!! TGATATGAAATGCTGTTTTT+TGG - chr1_3:13911868-13911887 Msa0105420:exon 25.0%
!! AGTATTTTATACCTGAGTTT+AGG + chr1_3:13904887-13904906 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG + chr1_3:13905177-13905196 None:intergenic 25.0%
! AGGTTTAGATATTAATGAGT+TGG - chr1_3:13905206-13905225 Msa0105420:intron 25.0%
! GTTCTATCATAAACCATATT+TGG + chr1_3:13905234-13905253 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr1_3:13905238-13905257 Msa0105420:CDS 25.0%
! ATTGAGTTAGCATTTATCAT+TGG - chr1_3:13905469-13905488 Msa0105420:intron 25.0%
! TTGTCATAGATATCAACAAA+GGG + chr1_3:13905643-13905662 None:intergenic 25.0%
!!! ACTTTTGAAATATGTGTTTG+TGG + chr1_3:13905700-13905719 None:intergenic 25.0%
! TGGTAATAAAACTGATTGTT+CGG - chr1_3:13905742-13905761 Msa0105420:intron 25.0%
! AAAAATTAGCTATCCAGATT+TGG + chr1_3:13905844-13905863 None:intergenic 25.0%
!! ATAGTTTTTACTATACGCTT+TGG + chr1_3:13905944-13905963 None:intergenic 25.0%
! AAAGCGTATAGTAAAAACTA+TGG - chr1_3:13905943-13905962 Msa0105420:intron 25.0%
! AAACCACAAATATTCTGATA+GGG + chr1_3:13906901-13906920 None:intergenic 25.0%
! AAAACCACAAATATTCTGAT+AGG + chr1_3:13906902-13906921 None:intergenic 25.0%
!! AGAATATTTGTGGTTTTTCT+TGG - chr1_3:13906905-13906924 Msa0105420:intron 25.0%
! AACTTAATTACGAAAGCAAA+TGG - chr1_3:13907044-13907063 Msa0105420:intron 25.0%
! TGAAGAACATAAAAATACCT+TGG + chr1_3:13907220-13907239 None:intergenic 25.0%
! TGTTTATAAAGGTTCTTGTA+AGG - chr1_3:13907279-13907298 Msa0105420:intron 25.0%
! AACGATTCACAGTTAATTAT+TGG - chr1_3:13907310-13907329 Msa0105420:intron 25.0%
!! TTTATCGTAAGAGAAGTTTT+AGG - chr1_3:13907484-13907503 Msa0105420:intron 25.0%
! AATTCAGATTGAGTAAAAGA+TGG - chr1_3:13907650-13907669 Msa0105420:intron 25.0%
! TGGTCATGTATAAAAATGAA+AGG + chr1_3:13907872-13907891 None:intergenic 25.0%
!!! TATTGTTGATTTCCTTGTAT+AGG - chr1_3:13907933-13907952 Msa0105420:intron 25.0%
! TTCCTTGTATAGGTATTAAT+TGG - chr1_3:13907943-13907962 Msa0105420:intron 25.0%
! GTTGTTGTGAAATCTATTAA+AGG + chr1_3:13908222-13908241 None:intergenic 25.0%
! AGTAGTTAATTATGCAGTTA+TGG + chr1_3:13908600-13908619 None:intergenic 25.0%
!! GTCATTATACTTCAAGTTAT+GGG + chr1_3:13908732-13908751 None:intergenic 25.0%
!! TGTCATTATACTTCAAGTTA+TGG + chr1_3:13908733-13908752 None:intergenic 25.0%
! TGCAATAAAGAAATGAGTAT+GGG + chr1_3:13908881-13908900 None:intergenic 25.0%
! TTGCAATAAAGAAATGAGTA+TGG + chr1_3:13908882-13908901 None:intergenic 25.0%
!!! ATTTATTTGGCGTTTTAAAC+CGG + chr1_3:13909164-13909183 None:intergenic 25.0%
! AGTAGTTAATTATGCAGTTA+TGG + chr1_3:13908600-13908619 None:intergenic 25.0%
! GATTATAAATAAAGATGCAG+AGG - chr1_3:13909860-13909879 Msa0105420:intron 25.0%
! ATAAGAAAGTAACTGTAGAA+AGG + chr1_3:13909964-13909983 None:intergenic 25.0%
! TTAAAATGCCATTAAATGGA+CGG + chr1_3:13910112-13910131 None:intergenic 25.0%
!! TCCATTTAATGGCATTTTAA+TGG - chr1_3:13910112-13910131 Msa0105420:CDS 25.0%
! TTAACCTGTATCGTATTATT+CGG - chr1_3:13910469-13910488 Msa0105420:intron 25.0%
! TAGAAATAAAAACAGTGTGT+TGG + chr1_3:13910592-13910611 None:intergenic 25.0%
! AACAGACAAAAACAAAAACA+TGG + chr1_3:13910615-13910634 None:intergenic 25.0%
! AAAGAAGGAAAAGTTAGTTA+AGG - chr1_3:13910874-13910893 Msa0105420:intron 25.0%
! TAAGAAACAAACAAGTTCAA+AGG + chr1_3:13911110-13911129 None:intergenic 25.0%
! TAGATACAGTACATAAAATC+GGG - chr1_3:13911287-13911306 Msa0105420:intron 25.0%
! AAAACTTTACCTAGAAATGT+AGG + chr1_3:13911326-13911345 None:intergenic 25.0%
! ACAATACATGTAGAAATTGA+AGG + chr1_3:13911396-13911415 None:intergenic 25.0%
! AAAATTTCATTGCTCTGATA+TGG - chr1_3:13911575-13911594 Msa0105420:intron 25.0%
! AAATTTCATTGCTCTGATAT+GGG - chr1_3:13911576-13911595 Msa0105420:intron 25.0%
!! CAATTCAGTATCAATTTTGA+GGG + chr1_3:13911650-13911669 None:intergenic 25.0%
! TCGTATTAGATTCCAAAATA+AGG + chr1_3:13911760-13911779 None:intergenic 25.0%
!!! TGATATGAAATGCTGTTTTT+TGG - chr1_3:13911868-13911887 Msa0105420:exon 25.0%
AAGAAAAAGCAAGCATATGA+TGG + chr1_3:13904595-13904614 None:intergenic 30.0%
AAAAGATGTGTCCTAATTCA+AGG + chr1_3:13904648-13904667 None:intergenic 30.0%
ATGTTTCTTACCTACAAACA+AGG - chr1_3:13904687-13904706 Msa0105420:three_prime_UTR 30.0%
!! CCTAAATTAGAAGCATTTGA+AGG + chr1_3:13904910-13904929 None:intergenic 30.0%
CCTTCAAATGCTTCTAATTT+AGG - chr1_3:13904907-13904926 Msa0105420:CDS 30.0%
TGTAGTAAAGAGAGTAGATT+AGG - chr1_3:13905116-13905135 Msa0105420:intron 30.0%
! TAATGAGTTGGATCCAAATA+TGG - chr1_3:13905218-13905237 Msa0105420:intron 30.0%
! CCACTAATTTTCACTTCAAT+GGG + chr1_3:13905439-13905458 None:intergenic 30.0%
CCATTGAAGTGAAAATTAGT+GGG - chr1_3:13905437-13905456 Msa0105420:intron 30.0%
!! TCTCAACTGATTTGAGTTAA+GGG + chr1_3:13905553-13905572 None:intergenic 30.0%
!! TTCTCAACTGATTTGAGTTA+AGG + chr1_3:13905554-13905573 None:intergenic 30.0%
TGTCATAGATATCAACAAAG+GGG + chr1_3:13905642-13905661 None:intergenic 30.0%
CTTGTCATAGATATCAACAA+AGG + chr1_3:13905644-13905663 None:intergenic 30.0%
CTTTGTTGATATCTATGACA+AGG - chr1_3:13905642-13905661 Msa0105420:intron 30.0%
GACAACAATGACAATTTGAT+GGG + chr1_3:13905796-13905815 None:intergenic 30.0%
TGACAACAATGACAATTTGA+TGG + chr1_3:13905797-13905816 None:intergenic 30.0%
! TGGTTTTCTATAGAACACTA+TGG + chr1_3:13906042-13906061 None:intergenic 30.0%
!!! ATCAAAAGCATTTTTCATGC+TGG - chr1_3:13906120-13906139 Msa0105420:CDS 30.0%
! TCTAAATTTTGTGAGAATGC+AGG - chr1_3:13906397-13906416 Msa0105420:intron 30.0%
AAATCATAAGTAGGATGCAA+AGG + chr1_3:13906495-13906514 None:intergenic 30.0%
CATCCTACTTATGATTTGAA+GGG - chr1_3:13906498-13906517 Msa0105420:intron 30.0%
!! TTTGAAGGGCATTATAAAGT+TGG - chr1_3:13906512-13906531 Msa0105420:intron 30.0%
CATGAAACTAGAAGAAAGTT+TGG + chr1_3:13906573-13906592 None:intergenic 30.0%
TATAGGTGATATAACATGCT+TGG - chr1_3:13906738-13906757 Msa0105420:intron 30.0%
TGCAGAGATGATATTTAATG+AGG - chr1_3:13906837-13906856 Msa0105420:intron 30.0%
! TTGCTTCATACCTTTAAAGA+AGG + chr1_3:13906868-13906887 None:intergenic 30.0%
ATACCCTATCAGAATATTTG+TGG - chr1_3:13906895-13906914 Msa0105420:intron 30.0%
! TTTTCTTGGCTTAATCATTG+AGG - chr1_3:13906919-13906938 Msa0105420:intron 30.0%
TTTCTTGGCTTAATCATTGA+GGG - chr1_3:13906920-13906939 Msa0105420:intron 30.0%
TTACGAAAGCAAATGGAATT+AGG - chr1_3:13907051-13907070 Msa0105420:intron 30.0%
ATAACATTGTTGTAGCTGAA+AGG - chr1_3:13907148-13907167 Msa0105420:intron 30.0%
TAACATTGTTGTAGCTGAAA+GGG - chr1_3:13907149-13907168 Msa0105420:intron 30.0%
!! ACAGTTAATTATTGGTAACG+TGG - chr1_3:13907318-13907337 Msa0105420:intron 30.0%
!! CAGTTAATTATTGGTAACGT+GGG - chr1_3:13907319-13907338 Msa0105420:intron 30.0%
!! AGTTAATTATTGGTAACGTG+GGG - chr1_3:13907320-13907339 Msa0105420:intron 30.0%
TGGGGAATATTGAATTGAAA+TGG - chr1_3:13907338-13907357 Msa0105420:intron 30.0%
GAATTGAAATGGTTAAAAGG+AGG - chr1_3:13907349-13907368 Msa0105420:intron 30.0%
AACTTCTCTTACGATAAATG+TGG + chr1_3:13907482-13907501 None:intergenic 30.0%
CACTAATCTGACAAATTGTT+AGG + chr1_3:13907544-13907563 None:intergenic 30.0%
TGGTGATTTCAGAAATCATT+AGG + chr1_3:13907696-13907715 None:intergenic 30.0%
CCTGTGAAAAAACATGATAT+AGG + chr1_3:13907747-13907766 None:intergenic 30.0%
!!! CCTATATCATGTTTTTTCAC+AGG - chr1_3:13907744-13907763 Msa0105420:intron 30.0%
TTATCCAACAAACGTAAACA+CGG + chr1_3:13907823-13907842 None:intergenic 30.0%
! TTTACGTTTGTTGGATAAGT+GGG - chr1_3:13907825-13907844 Msa0105420:intron 30.0%
CACCAATTAATACCTATACA+AGG + chr1_3:13907948-13907967 None:intergenic 30.0%
CTTGTATAGGTATTAATTGG+TGG - chr1_3:13907946-13907965 Msa0105420:intron 30.0%
GATAATCATATATCAACAGC+TGG - chr1_3:13908015-13908034 Msa0105420:intron 30.0%
!! TTTTAACTACCCTACAGATA+TGG + chr1_3:13908268-13908287 None:intergenic 30.0%
AGGTAATTCAAGGTTAAGAT+GGG + chr1_3:13908299-13908318 None:intergenic 30.0%
AATAATATTGCAGAACTTCG+AGG - chr1_3:13908428-13908447 Msa0105420:intron 30.0%
ATAATATTGCAGAACTTCGA+GGG - chr1_3:13908429-13908448 Msa0105420:intron 30.0%
ACAAACAGAGTATATGATCA+AGG + chr1_3:13908785-13908804 None:intergenic 30.0%
GCAATAAAGAAATGAGTATG+GGG + chr1_3:13908880-13908899 None:intergenic 30.0%
AATAATATTGCAGAACTTCG+AGG - chr1_3:13908428-13908447 Msa0105420:intron 30.0%
ATAATATTGCAGAACTTCGA+GGG - chr1_3:13908429-13908448 Msa0105420:intron 30.0%
ATTCTATAACTTATGCCCTT+AGG + chr1_3:13909751-13909770 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG - chr1_3:13909866-13909885 Msa0105420:intron 30.0%
AATAAAGATGCAGAGGAAAA+GGG - chr1_3:13909867-13909886 Msa0105420:intron 30.0%
! ACATTGGGTATTTTGTATGT+GGG - chr1_3:13909893-13909912 Msa0105420:intron 30.0%
GCCATTAAAATGCCATTAAA+TGG + chr1_3:13910116-13910135 None:intergenic 30.0%
GTTAAATGCATTTGTAGATC+TGG - chr1_3:13910163-13910182 Msa0105420:intron 30.0%
TTCTTTAACTCGAATAATGC+TGG - chr1_3:13910330-13910349 Msa0105420:intron 30.0%
TCGAATAATGCTGGATAATA+TGG - chr1_3:13910339-13910358 Msa0105420:intron 30.0%
ATGGTTGTACCTTTATCAAA+CGG - chr1_3:13910358-13910377 Msa0105420:intron 30.0%
CATTACAGCAGTATATTTCA+CGG + chr1_3:13910811-13910830 None:intergenic 30.0%
AAAAGTTAGTTAAGGTCAGT+TGG - chr1_3:13910882-13910901 Msa0105420:intron 30.0%
AGTAAGAGAGGATTATTAAG+AGG - chr1_3:13910907-13910926 Msa0105420:intron 30.0%
GTAAGAGAGGATTATTAAGA+GGG - chr1_3:13910908-13910927 Msa0105420:intron 30.0%
TAAGAGAGGATTATTAAGAG+GGG - chr1_3:13910909-13910928 Msa0105420:intron 30.0%
! GTGAATTTGATAGTTTCTGT+TGG - chr1_3:13910947-13910966 Msa0105420:intron 30.0%
! TTTTGTGAAGGAGAAATTCT+CGG - chr1_3:13910982-13911001 Msa0105420:intron 30.0%
TGATATCTTGAATTTGGTTG+AGG - chr1_3:13911175-13911194 Msa0105420:intron 30.0%
TTTGTCATATTTGTGAATCC+AGG - chr1_3:13911246-13911265 Msa0105420:intron 30.0%
TAAAACAGTGACTAAAGCAA+AGG + chr1_3:13911516-13911535 None:intergenic 30.0%
!! GTTTTTAGAAACTCACAAAC+CGG - chr1_3:13911538-13911557 Msa0105420:intron 30.0%
! CAGAGCAATGAAATTTTGTA+GGG + chr1_3:13911572-13911591 None:intergenic 30.0%
! TCAGAGCAATGAAATTTTGT+AGG + chr1_3:13911573-13911592 None:intergenic 30.0%
! CCAATTCAGTATCAATTTTG+AGG + chr1_3:13911651-13911670 None:intergenic 30.0%
CCTCAAAATTGATACTGAAT+TGG - chr1_3:13911648-13911667 Msa0105420:intron 30.0%
ATATCATAATCAAGCTCTTC+CGG + chr1_3:13911695-13911714 None:intergenic 30.0%
TTTCTTATATCATTCCTTGC+CGG - chr1_3:13911714-13911733 Msa0105420:intron 30.0%
TGTGTTTCATTACTTCATGA+AGG + chr1_3:13911783-13911802 None:intergenic 30.0%
! ATAAGCATTGCTTTCAGAAT+TGG - chr1_3:13911943-13911962 Msa0105420:five_prime_UTR 30.0%
ATCTTACCATACTCATACAT+AGG + chr1_3:13912052-13912071 None:intergenic 30.0%
AAGAAAAAGCAAGCATATGA+TGG + chr1_3:13904595-13904614 None:intergenic 30.0%
AAAAGATGTGTCCTAATTCA+AGG + chr1_3:13904648-13904667 None:intergenic 30.0%
ATGTTTCTTACCTACAAACA+AGG - chr1_3:13904687-13904706 Msa0105420:three_prime_UTR 30.0%
!! CCTAAATTAGAAGCATTTGA+AGG + chr1_3:13904910-13904929 None:intergenic 30.0%
CCTTCAAATGCTTCTAATTT+AGG - chr1_3:13904907-13904926 Msa0105420:CDS 30.0%
TGTAGTAAAGAGAGTAGATT+AGG - chr1_3:13905116-13905135 Msa0105420:intron 30.0%
! TAATGAGTTGGATCCAAATA+TGG - chr1_3:13905218-13905237 Msa0105420:intron 30.0%
! CCACTAATTTTCACTTCAAT+GGG + chr1_3:13905439-13905458 None:intergenic 30.0%
CCATTGAAGTGAAAATTAGT+GGG - chr1_3:13905437-13905456 Msa0105420:intron 30.0%
!! TCTCAACTGATTTGAGTTAA+GGG + chr1_3:13905553-13905572 None:intergenic 30.0%
!! TTCTCAACTGATTTGAGTTA+AGG + chr1_3:13905554-13905573 None:intergenic 30.0%
TGTCATAGATATCAACAAAG+GGG + chr1_3:13905642-13905661 None:intergenic 30.0%
CTTGTCATAGATATCAACAA+AGG + chr1_3:13905644-13905663 None:intergenic 30.0%
CTTTGTTGATATCTATGACA+AGG - chr1_3:13905642-13905661 Msa0105420:intron 30.0%
GACAACAATGACAATTTGAT+GGG + chr1_3:13905796-13905815 None:intergenic 30.0%
TGACAACAATGACAATTTGA+TGG + chr1_3:13905797-13905816 None:intergenic 30.0%
! TGGTTTTCTATAGAACACTA+TGG + chr1_3:13906042-13906061 None:intergenic 30.0%
!!! ATCAAAAGCATTTTTCATGC+TGG - chr1_3:13906120-13906139 Msa0105420:CDS 30.0%
! TCTAAATTTTGTGAGAATGC+AGG - chr1_3:13906397-13906416 Msa0105420:intron 30.0%
AAATCATAAGTAGGATGCAA+AGG + chr1_3:13906495-13906514 None:intergenic 30.0%
CATCCTACTTATGATTTGAA+GGG - chr1_3:13906498-13906517 Msa0105420:intron 30.0%
!! TTTGAAGGGCATTATAAAGT+TGG - chr1_3:13906512-13906531 Msa0105420:intron 30.0%
CATGAAACTAGAAGAAAGTT+TGG + chr1_3:13906573-13906592 None:intergenic 30.0%
TATAGGTGATATAACATGCT+TGG - chr1_3:13906738-13906757 Msa0105420:intron 30.0%
TGCAGAGATGATATTTAATG+AGG - chr1_3:13906837-13906856 Msa0105420:intron 30.0%
! TTGCTTCATACCTTTAAAGA+AGG + chr1_3:13906868-13906887 None:intergenic 30.0%
ATACCCTATCAGAATATTTG+TGG - chr1_3:13906895-13906914 Msa0105420:intron 30.0%
! TTTTCTTGGCTTAATCATTG+AGG - chr1_3:13906919-13906938 Msa0105420:intron 30.0%
TTTCTTGGCTTAATCATTGA+GGG - chr1_3:13906920-13906939 Msa0105420:intron 30.0%
TTACGAAAGCAAATGGAATT+AGG - chr1_3:13907051-13907070 Msa0105420:intron 30.0%
ATAACATTGTTGTAGCTGAA+AGG - chr1_3:13907148-13907167 Msa0105420:intron 30.0%
TAACATTGTTGTAGCTGAAA+GGG - chr1_3:13907149-13907168 Msa0105420:intron 30.0%
!! ACAGTTAATTATTGGTAACG+TGG - chr1_3:13907318-13907337 Msa0105420:intron 30.0%
!! CAGTTAATTATTGGTAACGT+GGG - chr1_3:13907319-13907338 Msa0105420:intron 30.0%
!! AGTTAATTATTGGTAACGTG+GGG - chr1_3:13907320-13907339 Msa0105420:intron 30.0%
TGGGGAATATTGAATTGAAA+TGG - chr1_3:13907338-13907357 Msa0105420:intron 30.0%
GAATTGAAATGGTTAAAAGG+AGG - chr1_3:13907349-13907368 Msa0105420:intron 30.0%
AACTTCTCTTACGATAAATG+TGG + chr1_3:13907482-13907501 None:intergenic 30.0%
CACTAATCTGACAAATTGTT+AGG + chr1_3:13907544-13907563 None:intergenic 30.0%
TGGTGATTTCAGAAATCATT+AGG + chr1_3:13907696-13907715 None:intergenic 30.0%
CCTGTGAAAAAACATGATAT+AGG + chr1_3:13907747-13907766 None:intergenic 30.0%
!!! CCTATATCATGTTTTTTCAC+AGG - chr1_3:13907744-13907763 Msa0105420:intron 30.0%
TTATCCAACAAACGTAAACA+CGG + chr1_3:13907823-13907842 None:intergenic 30.0%
! TTTACGTTTGTTGGATAAGT+GGG - chr1_3:13907825-13907844 Msa0105420:intron 30.0%
CACCAATTAATACCTATACA+AGG + chr1_3:13907948-13907967 None:intergenic 30.0%
CTTGTATAGGTATTAATTGG+TGG - chr1_3:13907946-13907965 Msa0105420:intron 30.0%
GATAATCATATATCAACAGC+TGG - chr1_3:13908015-13908034 Msa0105420:intron 30.0%
!! TTTTAACTACCCTACAGATA+TGG + chr1_3:13908268-13908287 None:intergenic 30.0%
AGGTAATTCAAGGTTAAGAT+GGG + chr1_3:13908299-13908318 None:intergenic 30.0%
AATAATATTGCAGAACTTCG+AGG - chr1_3:13908428-13908447 Msa0105420:intron 30.0%
ATAATATTGCAGAACTTCGA+GGG - chr1_3:13908429-13908448 Msa0105420:intron 30.0%
ACAAACAGAGTATATGATCA+AGG + chr1_3:13908785-13908804 None:intergenic 30.0%
GCAATAAAGAAATGAGTATG+GGG + chr1_3:13908880-13908899 None:intergenic 30.0%
AATAATATTGCAGAACTTCG+AGG - chr1_3:13908428-13908447 Msa0105420:intron 30.0%
ATAATATTGCAGAACTTCGA+GGG - chr1_3:13908429-13908448 Msa0105420:intron 30.0%
ATTCTATAACTTATGCCCTT+AGG + chr1_3:13909751-13909770 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG - chr1_3:13909866-13909885 Msa0105420:intron 30.0%
AATAAAGATGCAGAGGAAAA+GGG - chr1_3:13909867-13909886 Msa0105420:intron 30.0%
! ACATTGGGTATTTTGTATGT+GGG - chr1_3:13909893-13909912 Msa0105420:intron 30.0%
GCCATTAAAATGCCATTAAA+TGG + chr1_3:13910116-13910135 None:intergenic 30.0%
GTTAAATGCATTTGTAGATC+TGG - chr1_3:13910163-13910182 Msa0105420:intron 30.0%
TTCTTTAACTCGAATAATGC+TGG - chr1_3:13910330-13910349 Msa0105420:intron 30.0%
TCGAATAATGCTGGATAATA+TGG - chr1_3:13910339-13910358 Msa0105420:intron 30.0%
ATGGTTGTACCTTTATCAAA+CGG - chr1_3:13910358-13910377 Msa0105420:intron 30.0%
CATTACAGCAGTATATTTCA+CGG + chr1_3:13910811-13910830 None:intergenic 30.0%
AAAAGTTAGTTAAGGTCAGT+TGG - chr1_3:13910882-13910901 Msa0105420:intron 30.0%
AGTAAGAGAGGATTATTAAG+AGG - chr1_3:13910907-13910926 Msa0105420:intron 30.0%
GTAAGAGAGGATTATTAAGA+GGG - chr1_3:13910908-13910927 Msa0105420:intron 30.0%
TAAGAGAGGATTATTAAGAG+GGG - chr1_3:13910909-13910928 Msa0105420:intron 30.0%
! GTGAATTTGATAGTTTCTGT+TGG - chr1_3:13910947-13910966 Msa0105420:intron 30.0%
! TTTTGTGAAGGAGAAATTCT+CGG - chr1_3:13910982-13911001 Msa0105420:intron 30.0%
TGATATCTTGAATTTGGTTG+AGG - chr1_3:13911175-13911194 Msa0105420:intron 30.0%
TTTGTCATATTTGTGAATCC+AGG - chr1_3:13911246-13911265 Msa0105420:intron 30.0%
TAAAACAGTGACTAAAGCAA+AGG + chr1_3:13911516-13911535 None:intergenic 30.0%
!! GTTTTTAGAAACTCACAAAC+CGG - chr1_3:13911538-13911557 Msa0105420:intron 30.0%
! CAGAGCAATGAAATTTTGTA+GGG + chr1_3:13911572-13911591 None:intergenic 30.0%
! TCAGAGCAATGAAATTTTGT+AGG + chr1_3:13911573-13911592 None:intergenic 30.0%
! CCAATTCAGTATCAATTTTG+AGG + chr1_3:13911651-13911670 None:intergenic 30.0%
CCTCAAAATTGATACTGAAT+TGG - chr1_3:13911648-13911667 Msa0105420:intron 30.0%
ATATCATAATCAAGCTCTTC+CGG + chr1_3:13911695-13911714 None:intergenic 30.0%
TTTCTTATATCATTCCTTGC+CGG - chr1_3:13911714-13911733 Msa0105420:intron 30.0%
TGTGTTTCATTACTTCATGA+AGG + chr1_3:13911783-13911802 None:intergenic 30.0%
! ATAAGCATTGCTTTCAGAAT+TGG - chr1_3:13911943-13911962 Msa0105420:five_prime_UTR 30.0%
ATCTTACCATACTCATACAT+AGG + chr1_3:13912052-13912071 None:intergenic 30.0%
TTGCGAAAAGTAGAAACGAA+TGG - chr1_3:13904495-13904514 Msa0105420:three_prime_UTR 35.0%
TGCGAAAAGTAGAAACGAAT+GGG - chr1_3:13904496-13904515 Msa0105420:three_prime_UTR 35.0%
ATTCCTCACAACCTTGAATT+AGG - chr1_3:13904634-13904653 Msa0105420:three_prime_UTR 35.0%
! TGACAAGTAACCTTGTTTGT+AGG + chr1_3:13904700-13904719 None:intergenic 35.0%
GTTATGTCTCTGATGAGAAA+TGG + chr1_3:13904729-13904748 None:intergenic 35.0%
TCATCAGAGACATAACTTCT+AGG - chr1_3:13904733-13904752 Msa0105420:three_prime_UTR 35.0%
GATTCTCGCTTAAACTACAA+AGG - chr1_3:13904858-13904877 Msa0105420:exon 35.0%
CTCTTTACTACAGAATCTAC+AGG + chr1_3:13905108-13905127 None:intergenic 35.0%
AAAGAGAGTAGATTAGGTGA+AGG - chr1_3:13905122-13905141 Msa0105420:intron 35.0%
AGTCAGATTACAAGAAGTAG+AGG - chr1_3:13905147-13905166 Msa0105420:intron 35.0%
CCCATTGAAGTGAAAATTAG+TGG - chr1_3:13905436-13905455 Msa0105420:intron 35.0%
! CCCACTAATTTTCACTTCAA+TGG + chr1_3:13905440-13905459 None:intergenic 35.0%
AGGGTTGAAGTAGTTAAACA+CGG + chr1_3:13905534-13905553 None:intergenic 35.0%
!!! GTTTTGAAGTACGTCATTCA+TGG - chr1_3:13905595-13905614 Msa0105420:intron 35.0%
GGGGCAATAATTGAATTTGA+AGG + chr1_3:13905622-13905641 None:intergenic 35.0%
GTCATAGATATCAACAAAGG+GGG + chr1_3:13905641-13905660 None:intergenic 35.0%
! TGATTGTTCGGAACTTTTGA+GGG - chr1_3:13905754-13905773 Msa0105420:intron 35.0%
CAGATTTGGATAGACAAAAC+AGG + chr1_3:13905830-13905849 None:intergenic 35.0%
! CTGTTTTGTCTATCCAAATC+TGG - chr1_3:13905828-13905847 Msa0105420:intron 35.0%
! CTAGAGTTTCTTGTTTCTCA+AGG + chr1_3:13905905-13905924 None:intergenic 35.0%
! AAATGAGTTGGAGATAGACA+TGG + chr1_3:13906062-13906081 None:intergenic 35.0%
! TTTTTCATGCTGGTGCAATT+TGG - chr1_3:13906130-13906149 Msa0105420:CDS 35.0%
!!! GTCATTTTGCTGTTTGTAGA+TGG - chr1_3:13906321-13906340 Msa0105420:intron 35.0%
GCATCCTACTTATGATTTGA+AGG - chr1_3:13906497-13906516 Msa0105420:intron 35.0%
ATGCCCTTCAAATCATAAGT+AGG + chr1_3:13906504-13906523 None:intergenic 35.0%
! TGAGGTTGATCCTTCTTTAA+AGG - chr1_3:13906855-13906874 Msa0105420:intron 35.0%
!! GAGGGTTACTTTGAAATATC+AGG - chr1_3:13906938-13906957 Msa0105420:intron 35.0%
!! GGTTACTTTGAAATATCAGG+TGG - chr1_3:13906941-13906960 Msa0105420:intron 35.0%
! GATGGAGATTTTGTCCATAA+AGG - chr1_3:13906978-13906997 Msa0105420:intron 35.0%
TTCCAAACTGTAGTCCTTTA+TGG + chr1_3:13906995-13907014 None:intergenic 35.0%
ATCTTCAGTTATTCGTGTGT+AGG - chr1_3:13907117-13907136 Msa0105420:intron 35.0%
TAGTGCTAAACTTTATGCAG+AGG - chr1_3:13907172-13907191 Msa0105420:intron 35.0%
TCTTTATTGAAGAGTAGCCT+CGG + chr1_3:13907432-13907451 None:intergenic 35.0%
TGGTTGTGTTATGTTTCATC+AGG - chr1_3:13907670-13907689 Msa0105420:intron 35.0%
!!! TCATGTTTTTTCACAGGCAA+TGG - chr1_3:13907750-13907769 Msa0105420:intron 35.0%
CTAGTCTCCAATATATATGC+AGG + chr1_3:13907790-13907809 None:intergenic 35.0%
! GTTTACGTTTGTTGGATAAG+TGG - chr1_3:13907824-13907843 Msa0105420:intron 35.0%
GTATAGGTATTAATTGGTGG+AGG - chr1_3:13907949-13907968 Msa0105420:intron 35.0%
! TAGAATGGGTTTGTTTGACA+TGG - chr1_3:13907981-13908000 Msa0105420:intron 35.0%
AATCATATATCAACAGCTGG+AGG - chr1_3:13908018-13908037 Msa0105420:intron 35.0%
! ATACAGGTCAACAGCTTTTA+GGG + chr1_3:13908055-13908074 None:intergenic 35.0%
GGAGAAAAATAGCCTTCAAT+TGG - chr1_3:13908077-13908096 Msa0105420:intron 35.0%
GAAAAATAGCCTTCAATTGG+AGG - chr1_3:13908080-13908099 Msa0105420:intron 35.0%
AAATGGCTGCAATATAGAGA+GGG + chr1_3:13908181-13908200 None:intergenic 35.0%
AAAATGGCTGCAATATAGAG+AGG + chr1_3:13908182-13908201 None:intergenic 35.0%
GAGGTAATTCAAGGTTAAGA+TGG + chr1_3:13908300-13908319 None:intergenic 35.0%
AGCAAAGATGAGGTAATTCA+AGG + chr1_3:13908309-13908328 None:intergenic 35.0%
!! AAAGCTTTGTTAGGCAGTTA+AGG + chr1_3:13908333-13908352 None:intergenic 35.0%
AGAATAAATAGGGGAGAGAA+GGG + chr1_3:13908519-13908538 None:intergenic 35.0%
AAGAATAAATAGGGGAGAGA+AGG + chr1_3:13908520-13908539 None:intergenic 35.0%
! TTAATTAAGTCAGTAGTGGG+AGG + chr1_3:13908552-13908571 None:intergenic 35.0%
AATGGAACAGGAGAACAAAA+CGG + chr1_3:13908921-13908940 None:intergenic 35.0%
CACAATCATGACATGCATAT+GGG - chr1_3:13908943-13908962 Msa0105420:intron 35.0%
GTTTGGAAGATGTAGAAATG+GGG + chr1_3:13908994-13909013 None:intergenic 35.0%
GGTTTGGAAGATGTAGAAAT+GGG + chr1_3:13908995-13909014 None:intergenic 35.0%
AGGTTTGGAAGATGTAGAAA+TGG + chr1_3:13908996-13909015 None:intergenic 35.0%
GATAGGAAAAGAGAAAGGTT+TGG + chr1_3:13909011-13909030 None:intergenic 35.0%
TGTTCTCGCTTGCATTTATT+TGG + chr1_3:13909177-13909196 None:intergenic 35.0%
! ATCAGTTGGTTTCTATCAAC+TGG + chr1_3:13909431-13909450 None:intergenic 35.0%
AGAATAAATAGGGGAGAGAA+GGG + chr1_3:13908519-13908538 None:intergenic 35.0%
AAGAATAAATAGGGGAGAGA+AGG + chr1_3:13908520-13908539 None:intergenic 35.0%
! TTAATTAAGTCAGTAGTGGG+AGG + chr1_3:13908552-13908571 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG - chr1_3:13909732-13909751 Msa0105420:CDS 35.0%
GTTAGATATAGGACTCCTAA+GGG - chr1_3:13909733-13909752 Msa0105420:CDS 35.0%
TGTAACTGCTATAGTGAGTT+AGG - chr1_3:13909838-13909857 Msa0105420:intron 35.0%
! GACATTGGGTATTTTGTATG+TGG - chr1_3:13909892-13909911 Msa0105420:intron 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG - chr1_3:13909902-13909921 Msa0105420:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG - chr1_3:13909903-13909922 Msa0105420:intron 35.0%
GCTATGCATCTTAAAGTGAT+TGG - chr1_3:13910134-13910153 Msa0105420:intron 35.0%
TAGATCTGGTGTTCATGATA+TGG - chr1_3:13910177-13910196 Msa0105420:intron 35.0%
ACAATATTATATCTGCAGCC+AGG + chr1_3:13910228-13910247 None:intergenic 35.0%
TCAACATCTCCGTTTGATAA+AGG + chr1_3:13910370-13910389 None:intergenic 35.0%
AAGACCGAATAATACGATAC+AGG + chr1_3:13910476-13910495 None:intergenic 35.0%
ATGAGTTTACACTCCAAATG+TGG - chr1_3:13910722-13910741 Msa0105420:intron 35.0%
CGTGAAATATACTGCTGTAA+TGG - chr1_3:13910809-13910828 Msa0105420:intron 35.0%
! TGTCAAATTGATGACAACCA+AGG + chr1_3:13910835-13910854 None:intergenic 35.0%
AATTTGACACGACCGTTATT+GGG - chr1_3:13910846-13910865 Msa0105420:intron 35.0%
CTTCTTTCTTACCCCAATAA+CGG + chr1_3:13910861-13910880 None:intergenic 35.0%
TTTGTGAAGGAGAAATTCTC+GGG - chr1_3:13910983-13911002 Msa0105420:intron 35.0%
!! AAGCTTTAAGAAATGGACAG+TGG + chr1_3:13911076-13911095 None:intergenic 35.0%
!! AGAGAGGAAGCTTTAAGAAA+TGG + chr1_3:13911083-13911102 None:intergenic 35.0%
CAAGTTCAAAGGAAAAAGAG+AGG + chr1_3:13911099-13911118 None:intergenic 35.0%
AGTTAGTTAAGAACGTGAAG+AGG + chr1_3:13911221-13911240 None:intergenic 35.0%
! CTAGATTTTATGAAGTGCAG+TGG + chr1_3:13911353-13911372 None:intergenic 35.0%
! TCAAAGTGGATTCCAACATA+TGG + chr1_3:13911488-13911507 None:intergenic 35.0%
AAGCAAAGGAAGAATCAAAG+TGG + chr1_3:13911502-13911521 None:intergenic 35.0%
! ATTTTGTAGGGAAACAGTAC+CGG + chr1_3:13911560-13911579 None:intergenic 35.0%
CACTAACCTATGTATGAGTA+TGG - chr1_3:13912043-13912062 Msa0105420:five_prime_UTR 35.0%
TTGCGAAAAGTAGAAACGAA+TGG - chr1_3:13904495-13904514 Msa0105420:three_prime_UTR 35.0%
TGCGAAAAGTAGAAACGAAT+GGG - chr1_3:13904496-13904515 Msa0105420:three_prime_UTR 35.0%
ATTCCTCACAACCTTGAATT+AGG - chr1_3:13904634-13904653 Msa0105420:three_prime_UTR 35.0%
! TGACAAGTAACCTTGTTTGT+AGG + chr1_3:13904700-13904719 None:intergenic 35.0%
GTTATGTCTCTGATGAGAAA+TGG + chr1_3:13904729-13904748 None:intergenic 35.0%
TCATCAGAGACATAACTTCT+AGG - chr1_3:13904733-13904752 Msa0105420:three_prime_UTR 35.0%
GATTCTCGCTTAAACTACAA+AGG - chr1_3:13904858-13904877 Msa0105420:exon 35.0%
CTCTTTACTACAGAATCTAC+AGG + chr1_3:13905108-13905127 None:intergenic 35.0%
AAAGAGAGTAGATTAGGTGA+AGG - chr1_3:13905122-13905141 Msa0105420:intron 35.0%
AGTCAGATTACAAGAAGTAG+AGG - chr1_3:13905147-13905166 Msa0105420:intron 35.0%
CCCATTGAAGTGAAAATTAG+TGG - chr1_3:13905436-13905455 Msa0105420:intron 35.0%
! CCCACTAATTTTCACTTCAA+TGG + chr1_3:13905440-13905459 None:intergenic 35.0%
AGGGTTGAAGTAGTTAAACA+CGG + chr1_3:13905534-13905553 None:intergenic 35.0%
!!! GTTTTGAAGTACGTCATTCA+TGG - chr1_3:13905595-13905614 Msa0105420:intron 35.0%
GGGGCAATAATTGAATTTGA+AGG + chr1_3:13905622-13905641 None:intergenic 35.0%
GTCATAGATATCAACAAAGG+GGG + chr1_3:13905641-13905660 None:intergenic 35.0%
! TGATTGTTCGGAACTTTTGA+GGG - chr1_3:13905754-13905773 Msa0105420:intron 35.0%
CAGATTTGGATAGACAAAAC+AGG + chr1_3:13905830-13905849 None:intergenic 35.0%
! CTGTTTTGTCTATCCAAATC+TGG - chr1_3:13905828-13905847 Msa0105420:intron 35.0%
! CTAGAGTTTCTTGTTTCTCA+AGG + chr1_3:13905905-13905924 None:intergenic 35.0%
! AAATGAGTTGGAGATAGACA+TGG + chr1_3:13906062-13906081 None:intergenic 35.0%
! TTTTTCATGCTGGTGCAATT+TGG - chr1_3:13906130-13906149 Msa0105420:CDS 35.0%
!!! GTCATTTTGCTGTTTGTAGA+TGG - chr1_3:13906321-13906340 Msa0105420:intron 35.0%
GCATCCTACTTATGATTTGA+AGG - chr1_3:13906497-13906516 Msa0105420:intron 35.0%
ATGCCCTTCAAATCATAAGT+AGG + chr1_3:13906504-13906523 None:intergenic 35.0%
! TGAGGTTGATCCTTCTTTAA+AGG - chr1_3:13906855-13906874 Msa0105420:intron 35.0%
!! GAGGGTTACTTTGAAATATC+AGG - chr1_3:13906938-13906957 Msa0105420:intron 35.0%
!! GGTTACTTTGAAATATCAGG+TGG - chr1_3:13906941-13906960 Msa0105420:intron 35.0%
! GATGGAGATTTTGTCCATAA+AGG - chr1_3:13906978-13906997 Msa0105420:intron 35.0%
TTCCAAACTGTAGTCCTTTA+TGG + chr1_3:13906995-13907014 None:intergenic 35.0%
ATCTTCAGTTATTCGTGTGT+AGG - chr1_3:13907117-13907136 Msa0105420:intron 35.0%
TAGTGCTAAACTTTATGCAG+AGG - chr1_3:13907172-13907191 Msa0105420:intron 35.0%
TCTTTATTGAAGAGTAGCCT+CGG + chr1_3:13907432-13907451 None:intergenic 35.0%
TGGTTGTGTTATGTTTCATC+AGG - chr1_3:13907670-13907689 Msa0105420:intron 35.0%
!!! TCATGTTTTTTCACAGGCAA+TGG - chr1_3:13907750-13907769 Msa0105420:intron 35.0%
CTAGTCTCCAATATATATGC+AGG + chr1_3:13907790-13907809 None:intergenic 35.0%
! GTTTACGTTTGTTGGATAAG+TGG - chr1_3:13907824-13907843 Msa0105420:intron 35.0%
GTATAGGTATTAATTGGTGG+AGG - chr1_3:13907949-13907968 Msa0105420:intron 35.0%
! TAGAATGGGTTTGTTTGACA+TGG - chr1_3:13907981-13908000 Msa0105420:intron 35.0%
AATCATATATCAACAGCTGG+AGG - chr1_3:13908018-13908037 Msa0105420:intron 35.0%
! ATACAGGTCAACAGCTTTTA+GGG + chr1_3:13908055-13908074 None:intergenic 35.0%
GGAGAAAAATAGCCTTCAAT+TGG - chr1_3:13908077-13908096 Msa0105420:intron 35.0%
GAAAAATAGCCTTCAATTGG+AGG - chr1_3:13908080-13908099 Msa0105420:intron 35.0%
AAATGGCTGCAATATAGAGA+GGG + chr1_3:13908181-13908200 None:intergenic 35.0%
AAAATGGCTGCAATATAGAG+AGG + chr1_3:13908182-13908201 None:intergenic 35.0%
GAGGTAATTCAAGGTTAAGA+TGG + chr1_3:13908300-13908319 None:intergenic 35.0%
AGCAAAGATGAGGTAATTCA+AGG + chr1_3:13908309-13908328 None:intergenic 35.0%
!! AAAGCTTTGTTAGGCAGTTA+AGG + chr1_3:13908333-13908352 None:intergenic 35.0%
AGAATAAATAGGGGAGAGAA+GGG + chr1_3:13908519-13908538 None:intergenic 35.0%
AAGAATAAATAGGGGAGAGA+AGG + chr1_3:13908520-13908539 None:intergenic 35.0%
! TTAATTAAGTCAGTAGTGGG+AGG + chr1_3:13908552-13908571 None:intergenic 35.0%
AATGGAACAGGAGAACAAAA+CGG + chr1_3:13908921-13908940 None:intergenic 35.0%
CACAATCATGACATGCATAT+GGG - chr1_3:13908943-13908962 Msa0105420:intron 35.0%
GTTTGGAAGATGTAGAAATG+GGG + chr1_3:13908994-13909013 None:intergenic 35.0%
GGTTTGGAAGATGTAGAAAT+GGG + chr1_3:13908995-13909014 None:intergenic 35.0%
AGGTTTGGAAGATGTAGAAA+TGG + chr1_3:13908996-13909015 None:intergenic 35.0%
GATAGGAAAAGAGAAAGGTT+TGG + chr1_3:13909011-13909030 None:intergenic 35.0%
TGTTCTCGCTTGCATTTATT+TGG + chr1_3:13909177-13909196 None:intergenic 35.0%
! ATCAGTTGGTTTCTATCAAC+TGG + chr1_3:13909431-13909450 None:intergenic 35.0%
AGAATAAATAGGGGAGAGAA+GGG + chr1_3:13908519-13908538 None:intergenic 35.0%
AAGAATAAATAGGGGAGAGA+AGG + chr1_3:13908520-13908539 None:intergenic 35.0%
! TTAATTAAGTCAGTAGTGGG+AGG + chr1_3:13908552-13908571 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG - chr1_3:13909732-13909751 Msa0105420:CDS 35.0%
GTTAGATATAGGACTCCTAA+GGG - chr1_3:13909733-13909752 Msa0105420:CDS 35.0%
TGTAACTGCTATAGTGAGTT+AGG - chr1_3:13909838-13909857 Msa0105420:intron 35.0%
! GACATTGGGTATTTTGTATG+TGG - chr1_3:13909892-13909911 Msa0105420:intron 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG - chr1_3:13909902-13909921 Msa0105420:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG - chr1_3:13909903-13909922 Msa0105420:intron 35.0%
GCTATGCATCTTAAAGTGAT+TGG - chr1_3:13910134-13910153 Msa0105420:intron 35.0%
TAGATCTGGTGTTCATGATA+TGG - chr1_3:13910177-13910196 Msa0105420:intron 35.0%
ACAATATTATATCTGCAGCC+AGG + chr1_3:13910228-13910247 None:intergenic 35.0%
TCAACATCTCCGTTTGATAA+AGG + chr1_3:13910370-13910389 None:intergenic 35.0%
AAGACCGAATAATACGATAC+AGG + chr1_3:13910476-13910495 None:intergenic 35.0%
ATGAGTTTACACTCCAAATG+TGG - chr1_3:13910722-13910741 Msa0105420:intron 35.0%
CGTGAAATATACTGCTGTAA+TGG - chr1_3:13910809-13910828 Msa0105420:intron 35.0%
! TGTCAAATTGATGACAACCA+AGG + chr1_3:13910835-13910854 None:intergenic 35.0%
AATTTGACACGACCGTTATT+GGG - chr1_3:13910846-13910865 Msa0105420:intron 35.0%
CTTCTTTCTTACCCCAATAA+CGG + chr1_3:13910861-13910880 None:intergenic 35.0%
TTTGTGAAGGAGAAATTCTC+GGG - chr1_3:13910983-13911002 Msa0105420:intron 35.0%
!! AAGCTTTAAGAAATGGACAG+TGG + chr1_3:13911076-13911095 None:intergenic 35.0%
!! AGAGAGGAAGCTTTAAGAAA+TGG + chr1_3:13911083-13911102 None:intergenic 35.0%
CAAGTTCAAAGGAAAAAGAG+AGG + chr1_3:13911099-13911118 None:intergenic 35.0%
AGTTAGTTAAGAACGTGAAG+AGG + chr1_3:13911221-13911240 None:intergenic 35.0%
! CTAGATTTTATGAAGTGCAG+TGG + chr1_3:13911353-13911372 None:intergenic 35.0%
! TCAAAGTGGATTCCAACATA+TGG + chr1_3:13911488-13911507 None:intergenic 35.0%
AAGCAAAGGAAGAATCAAAG+TGG + chr1_3:13911502-13911521 None:intergenic 35.0%
! ATTTTGTAGGGAAACAGTAC+CGG + chr1_3:13911560-13911579 None:intergenic 35.0%
CACTAACCTATGTATGAGTA+TGG - chr1_3:13912043-13912062 Msa0105420:five_prime_UTR 35.0%
GAAAAGTAGAAACGAATGGG+TGG - chr1_3:13904499-13904518 Msa0105420:three_prime_UTR 40.0%
TGTCCTAATTCAAGGTTGTG+AGG + chr1_3:13904640-13904659 None:intergenic 40.0%
TCTCTGATGAGAAATGGTTG+AGG + chr1_3:13904723-13904742 None:intergenic 40.0%
TACAAAGGCAACCTAAACTC+AGG - chr1_3:13904873-13904892 Msa0105420:CDS 40.0%
ATCTTCTGTCTTCGACTAGA+CGG - chr1_3:13905030-13905049 Msa0105420:intron 40.0%
TCTACTACTAACGCTCTGTT+TGG + chr1_3:13905412-13905431 None:intergenic 40.0%
AAGTAGTTAAACACGGGTGA+AGG + chr1_3:13905527-13905546 None:intergenic 40.0%
GGGTTGAAGTAGTTAAACAC+GGG + chr1_3:13905533-13905552 None:intergenic 40.0%
GAATGACGTACTTCAAAACC+AGG + chr1_3:13905594-13905613 None:intergenic 40.0%
! CTGATTGTTCGGAACTTTTG+AGG - chr1_3:13905753-13905772 Msa0105420:intron 40.0%
TCATAAGTAGGATGCAAAGG+AGG + chr1_3:13906492-13906511 None:intergenic 40.0%
TTCCATGTCAAATGGAATGG+TGG + chr1_3:13906764-13906783 None:intergenic 40.0%
CACTTCCATGTCAAATGGAA+TGG + chr1_3:13906767-13906786 None:intergenic 40.0%
CATTCCATTTGACATGGAAG+TGG - chr1_3:13906765-13906784 Msa0105420:intron 40.0%
! GGAAGTGGAAGCTTATTTCT+TGG - chr1_3:13906780-13906799 Msa0105420:intron 40.0%
!! CTTTGAAATATCAGGTGGAG+TGG - chr1_3:13906946-13906965 Msa0105420:intron 40.0%
GTCCATAAAGGACTACAGTT+TGG - chr1_3:13906990-13907009 Msa0105420:intron 40.0%
CTACAGTTTGGAAAAGTTCG+TGG - chr1_3:13907002-13907021 Msa0105420:intron 40.0%
AACTTTATGCAGAGGATGAG+TGG - chr1_3:13907180-13907199 Msa0105420:intron 40.0%
TGGCATTGCAACTTTAACCA+AGG - chr1_3:13907200-13907219 Msa0105420:intron 40.0%
!! ACATCTGGTTCTGTTTCTCT+TGG - chr1_3:13907399-13907418 Msa0105420:intron 40.0%
! GTTCTGTTTCTCTTGGATAC+TGG - chr1_3:13907406-13907425 Msa0105420:intron 40.0%
GCACAACTGGATCAGATAAA+AGG + chr1_3:13907460-13907479 None:intergenic 40.0%
TACGATAAATGTGGCACAAC+TGG + chr1_3:13907473-13907492 None:intergenic 40.0%
AGCATCGCCTGCATATATAT+TGG - chr1_3:13907780-13907799 Msa0105420:intron 40.0%
TGGAGGACGAAATCATAGAA+TGG - chr1_3:13907966-13907985 Msa0105420:intron 40.0%
GGAGGACGAAATCATAGAAT+GGG - chr1_3:13907967-13907986 Msa0105420:intron 40.0%
! GATACAGGTCAACAGCTTTT+AGG + chr1_3:13908056-13908075 None:intergenic 40.0%
AAAAGCTGTTGACCTGTATC+TGG - chr1_3:13908056-13908075 Msa0105420:intron 40.0%
!!! GGCTATTTTTCTCCAGATAC+AGG + chr1_3:13908071-13908090 None:intergenic 40.0%
CCTTAGAAAGAATGCGTGAA+AGG + chr1_3:13908128-13908147 None:intergenic 40.0%
CCTTTCACGCATTCTTTCTA+AGG - chr1_3:13908125-13908144 Msa0105420:intron 40.0%
TCCTACTTGCCATATCTGTA+GGG - chr1_3:13908256-13908275 Msa0105420:intron 40.0%
CAGTTAAGGAAGCAAAGATG+AGG + chr1_3:13908319-13908338 None:intergenic 40.0%
AGGACAAGGTGAATCTTTAG+GGG + chr1_3:13908675-13908694 None:intergenic 40.0%
GAGGACAAGGTGAATCTTTA+GGG + chr1_3:13908676-13908695 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG + chr1_3:13908677-13908696 None:intergenic 40.0%
AAAGATTCACCTTGTCCTCA+AGG - chr1_3:13908677-13908696 Msa0105420:intron 40.0%
TTATGATATCCTCCACCTTG+AGG + chr1_3:13908695-13908714 None:intergenic 40.0%
GATATCATAAGTGTCCACCT+GGG - chr1_3:13908705-13908724 Msa0105420:intron 40.0%
ATACAGGATGATTGATGTCG+TGG - chr1_3:13908826-13908845 Msa0105420:intron 40.0%
GAGATAAGGGGAACTACTAT+GGG + chr1_3:13908854-13908873 None:intergenic 40.0%
AGAGATAAGGGGAACTACTA+TGG + chr1_3:13908855-13908874 None:intergenic 40.0%
CATGATTGTGGAAATGGAAC+AGG + chr1_3:13908933-13908952 None:intergenic 40.0%
GCATGTCATGATTGTGGAAA+TGG + chr1_3:13908939-13908958 None:intergenic 40.0%
CCATATGCATGTCATGATTG+TGG + chr1_3:13908945-13908964 None:intergenic 40.0%
CCACAATCATGACATGCATA+TGG - chr1_3:13908942-13908961 Msa0105420:intron 40.0%
! ACCTTTCTCTTTTCCTATCG+CGG - chr1_3:13909012-13909031 Msa0105420:intron 40.0%
AACCTGATACTGAATTGGAC+CGG + chr1_3:13909102-13909121 None:intergenic 40.0%
AGAGGAACCTGATACTGAAT+TGG + chr1_3:13909107-13909126 None:intergenic 40.0%
TCCTCTTCTTCATCAGACAT+AGG - chr1_3:13909121-13909140 Msa0105420:intron 40.0%
!! GCGTTTTAAACCGGAATATC+GGG + chr1_3:13909155-13909174 None:intergenic 40.0%
!! GGCGTTTTAAACCGGAATAT+CGG + chr1_3:13909156-13909175 None:intergenic 40.0%
TATGCCAACTAACCTGTTGA+TGG - chr1_3:13909197-13909216 Msa0105420:intron 40.0%
TCTGTCAGTTTCTCTTCATC+TGG - chr1_3:13909277-13909296 Msa0105420:intron 40.0%
ATGGCAAAGAAGATGCATAC+TGG + chr1_3:13909345-13909364 None:intergenic 40.0%
CTTCTTTGCCATCAAACACT+CGG - chr1_3:13909353-13909372 Msa0105420:CDS 40.0%
GAACTCCATTTCTGCCATAA+CGG - chr1_3:13909375-13909394 Msa0105420:CDS 40.0%
! TGGGTATTTTGTATGTGGGT+TGG - chr1_3:13909897-13909916 Msa0105420:intron 40.0%
TAGAAAGGTAACCAACCTCT+AGG + chr1_3:13909949-13909968 None:intergenic 40.0%
ATGTCTGTCCGTCCATTTAA+TGG - chr1_3:13910101-13910120 Msa0105420:CDS 40.0%
ATCTGGTGTTCATGATATGG+CGG - chr1_3:13910180-13910199 Msa0105420:intron 40.0%
! GTAAGTTTGTGTTTTTCCCC+AGG - chr1_3:13910246-13910265 Msa0105420:intron 40.0%
! CAATGGGAGATTTGAAACTG+AGG - chr1_3:13910423-13910442 Msa0105420:intron 40.0%
! GAAACTGAGGTATTCATGAC+TGG - chr1_3:13910436-13910455 Msa0105420:intron 40.0%
AATGTTGACCTCAAGACATG+CGG + chr1_3:13910749-13910768 None:intergenic 40.0%
ATATACTGCTGTAATGGCCT+TGG - chr1_3:13910815-13910834 Msa0105420:intron 40.0%
CAATTTGACACGACCGTTAT+TGG - chr1_3:13910845-13910864 Msa0105420:intron 40.0%
ATTTGACACGACCGTTATTG+GGG - chr1_3:13910847-13910866 Msa0105420:intron 40.0%
CGTTATTGGGGTAAGAAAGA+AGG - chr1_3:13910859-13910878 Msa0105420:intron 40.0%
GGATTATTAAGAGGGGATGT+AGG - chr1_3:13910916-13910935 Msa0105420:intron 40.0%
TTGTGAAGGAGAAATTCTCG+GGG - chr1_3:13910984-13911003 Msa0105420:intron 40.0%
TATTTGTGAATCCAGGCTTC+AGG - chr1_3:13911253-13911272 Msa0105420:intron 40.0%
GTACATAAAATCGGGCAAAG+TGG - chr1_3:13911295-13911314 Msa0105420:intron 40.0%
GTGGAGTAACCTACATTTCT+AGG - chr1_3:13911314-13911333 Msa0105420:intron 40.0%
ACTGAATTGGCGCTTAAAGT+TGG - chr1_3:13911661-13911680 Msa0105420:intron 40.0%
AATTGGCGCTTAAAGTTGGA+AGG - chr1_3:13911665-13911684 Msa0105420:intron 40.0%
!! TTGGCCATCAATTTGCTAGA+TGG - chr1_3:13911887-13911906 Msa0105420:five_prime_UTR 40.0%
GTGGCTAGAATGACTAAGTT+AGG - chr1_3:13911909-13911928 Msa0105420:five_prime_UTR 40.0%
GAAAAGTAGAAACGAATGGG+TGG - chr1_3:13904499-13904518 Msa0105420:three_prime_UTR 40.0%
TGTCCTAATTCAAGGTTGTG+AGG + chr1_3:13904640-13904659 None:intergenic 40.0%
TCTCTGATGAGAAATGGTTG+AGG + chr1_3:13904723-13904742 None:intergenic 40.0%
TACAAAGGCAACCTAAACTC+AGG - chr1_3:13904873-13904892 Msa0105420:CDS 40.0%
ATCTTCTGTCTTCGACTAGA+CGG - chr1_3:13905030-13905049 Msa0105420:intron 40.0%
TCTACTACTAACGCTCTGTT+TGG + chr1_3:13905412-13905431 None:intergenic 40.0%
AAGTAGTTAAACACGGGTGA+AGG + chr1_3:13905527-13905546 None:intergenic 40.0%
GGGTTGAAGTAGTTAAACAC+GGG + chr1_3:13905533-13905552 None:intergenic 40.0%
GAATGACGTACTTCAAAACC+AGG + chr1_3:13905594-13905613 None:intergenic 40.0%
! CTGATTGTTCGGAACTTTTG+AGG - chr1_3:13905753-13905772 Msa0105420:intron 40.0%
TCATAAGTAGGATGCAAAGG+AGG + chr1_3:13906492-13906511 None:intergenic 40.0%
TTCCATGTCAAATGGAATGG+TGG + chr1_3:13906764-13906783 None:intergenic 40.0%
CACTTCCATGTCAAATGGAA+TGG + chr1_3:13906767-13906786 None:intergenic 40.0%
CATTCCATTTGACATGGAAG+TGG - chr1_3:13906765-13906784 Msa0105420:intron 40.0%
! GGAAGTGGAAGCTTATTTCT+TGG - chr1_3:13906780-13906799 Msa0105420:intron 40.0%
!! CTTTGAAATATCAGGTGGAG+TGG - chr1_3:13906946-13906965 Msa0105420:intron 40.0%
GTCCATAAAGGACTACAGTT+TGG - chr1_3:13906990-13907009 Msa0105420:intron 40.0%
CTACAGTTTGGAAAAGTTCG+TGG - chr1_3:13907002-13907021 Msa0105420:intron 40.0%
AACTTTATGCAGAGGATGAG+TGG - chr1_3:13907180-13907199 Msa0105420:intron 40.0%
TGGCATTGCAACTTTAACCA+AGG - chr1_3:13907200-13907219 Msa0105420:intron 40.0%
!! ACATCTGGTTCTGTTTCTCT+TGG - chr1_3:13907399-13907418 Msa0105420:intron 40.0%
! GTTCTGTTTCTCTTGGATAC+TGG - chr1_3:13907406-13907425 Msa0105420:intron 40.0%
GCACAACTGGATCAGATAAA+AGG + chr1_3:13907460-13907479 None:intergenic 40.0%
TACGATAAATGTGGCACAAC+TGG + chr1_3:13907473-13907492 None:intergenic 40.0%
AGCATCGCCTGCATATATAT+TGG - chr1_3:13907780-13907799 Msa0105420:intron 40.0%
TGGAGGACGAAATCATAGAA+TGG - chr1_3:13907966-13907985 Msa0105420:intron 40.0%
GGAGGACGAAATCATAGAAT+GGG - chr1_3:13907967-13907986 Msa0105420:intron 40.0%
! GATACAGGTCAACAGCTTTT+AGG + chr1_3:13908056-13908075 None:intergenic 40.0%
AAAAGCTGTTGACCTGTATC+TGG - chr1_3:13908056-13908075 Msa0105420:intron 40.0%
!!! GGCTATTTTTCTCCAGATAC+AGG + chr1_3:13908071-13908090 None:intergenic 40.0%
CCTTAGAAAGAATGCGTGAA+AGG + chr1_3:13908128-13908147 None:intergenic 40.0%
CCTTTCACGCATTCTTTCTA+AGG - chr1_3:13908125-13908144 Msa0105420:intron 40.0%
TCCTACTTGCCATATCTGTA+GGG - chr1_3:13908256-13908275 Msa0105420:intron 40.0%
CAGTTAAGGAAGCAAAGATG+AGG + chr1_3:13908319-13908338 None:intergenic 40.0%
AGGACAAGGTGAATCTTTAG+GGG + chr1_3:13908675-13908694 None:intergenic 40.0%
GAGGACAAGGTGAATCTTTA+GGG + chr1_3:13908676-13908695 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG + chr1_3:13908677-13908696 None:intergenic 40.0%
AAAGATTCACCTTGTCCTCA+AGG - chr1_3:13908677-13908696 Msa0105420:intron 40.0%
TTATGATATCCTCCACCTTG+AGG + chr1_3:13908695-13908714 None:intergenic 40.0%
GATATCATAAGTGTCCACCT+GGG - chr1_3:13908705-13908724 Msa0105420:intron 40.0%
ATACAGGATGATTGATGTCG+TGG - chr1_3:13908826-13908845 Msa0105420:intron 40.0%
GAGATAAGGGGAACTACTAT+GGG + chr1_3:13908854-13908873 None:intergenic 40.0%
AGAGATAAGGGGAACTACTA+TGG + chr1_3:13908855-13908874 None:intergenic 40.0%
CATGATTGTGGAAATGGAAC+AGG + chr1_3:13908933-13908952 None:intergenic 40.0%
GCATGTCATGATTGTGGAAA+TGG + chr1_3:13908939-13908958 None:intergenic 40.0%
CCATATGCATGTCATGATTG+TGG + chr1_3:13908945-13908964 None:intergenic 40.0%
CCACAATCATGACATGCATA+TGG - chr1_3:13908942-13908961 Msa0105420:intron 40.0%
! ACCTTTCTCTTTTCCTATCG+CGG - chr1_3:13909012-13909031 Msa0105420:intron 40.0%
AACCTGATACTGAATTGGAC+CGG + chr1_3:13909102-13909121 None:intergenic 40.0%
AGAGGAACCTGATACTGAAT+TGG + chr1_3:13909107-13909126 None:intergenic 40.0%
TCCTCTTCTTCATCAGACAT+AGG - chr1_3:13909121-13909140 Msa0105420:intron 40.0%
!! GCGTTTTAAACCGGAATATC+GGG + chr1_3:13909155-13909174 None:intergenic 40.0%
!! GGCGTTTTAAACCGGAATAT+CGG + chr1_3:13909156-13909175 None:intergenic 40.0%
TATGCCAACTAACCTGTTGA+TGG - chr1_3:13909197-13909216 Msa0105420:intron 40.0%
TCTGTCAGTTTCTCTTCATC+TGG - chr1_3:13909277-13909296 Msa0105420:intron 40.0%
ATGGCAAAGAAGATGCATAC+TGG + chr1_3:13909345-13909364 None:intergenic 40.0%
CTTCTTTGCCATCAAACACT+CGG - chr1_3:13909353-13909372 Msa0105420:CDS 40.0%
GAACTCCATTTCTGCCATAA+CGG - chr1_3:13909375-13909394 Msa0105420:CDS 40.0%
! TGGGTATTTTGTATGTGGGT+TGG - chr1_3:13909897-13909916 Msa0105420:intron 40.0%
TAGAAAGGTAACCAACCTCT+AGG + chr1_3:13909949-13909968 None:intergenic 40.0%
ATGTCTGTCCGTCCATTTAA+TGG - chr1_3:13910101-13910120 Msa0105420:CDS 40.0%
ATCTGGTGTTCATGATATGG+CGG - chr1_3:13910180-13910199 Msa0105420:intron 40.0%
! GTAAGTTTGTGTTTTTCCCC+AGG - chr1_3:13910246-13910265 Msa0105420:intron 40.0%
! CAATGGGAGATTTGAAACTG+AGG - chr1_3:13910423-13910442 Msa0105420:intron 40.0%
! GAAACTGAGGTATTCATGAC+TGG - chr1_3:13910436-13910455 Msa0105420:intron 40.0%
AATGTTGACCTCAAGACATG+CGG + chr1_3:13910749-13910768 None:intergenic 40.0%
ATATACTGCTGTAATGGCCT+TGG - chr1_3:13910815-13910834 Msa0105420:intron 40.0%
CAATTTGACACGACCGTTAT+TGG - chr1_3:13910845-13910864 Msa0105420:intron 40.0%
ATTTGACACGACCGTTATTG+GGG - chr1_3:13910847-13910866 Msa0105420:intron 40.0%
CGTTATTGGGGTAAGAAAGA+AGG - chr1_3:13910859-13910878 Msa0105420:intron 40.0%
GGATTATTAAGAGGGGATGT+AGG - chr1_3:13910916-13910935 Msa0105420:intron 40.0%
TTGTGAAGGAGAAATTCTCG+GGG - chr1_3:13910984-13911003 Msa0105420:intron 40.0%
TATTTGTGAATCCAGGCTTC+AGG - chr1_3:13911253-13911272 Msa0105420:intron 40.0%
GTACATAAAATCGGGCAAAG+TGG - chr1_3:13911295-13911314 Msa0105420:intron 40.0%
GTGGAGTAACCTACATTTCT+AGG - chr1_3:13911314-13911333 Msa0105420:intron 40.0%
ACTGAATTGGCGCTTAAAGT+TGG - chr1_3:13911661-13911680 Msa0105420:intron 40.0%
AATTGGCGCTTAAAGTTGGA+AGG - chr1_3:13911665-13911684 Msa0105420:intron 40.0%
!! TTGGCCATCAATTTGCTAGA+TGG - chr1_3:13911887-13911906 Msa0105420:five_prime_UTR 40.0%
GTGGCTAGAATGACTAAGTT+AGG - chr1_3:13911909-13911928 Msa0105420:five_prime_UTR 40.0%
AGTAAAAACCTGAGTGGAGG+TGG + chr1_3:13904762-13904781 None:intergenic 45.0%
TCTTCTGTCTTCGACTAGAC+GGG - chr1_3:13905031-13905050 Msa0105420:intron 45.0%
ATGACAACGCTAGAGAGAGT+TGG - chr1_3:13905066-13905085 Msa0105420:intron 45.0%
TGACAACGCTAGAGAGAGTT+GGG - chr1_3:13905067-13905086 Msa0105420:intron 45.0%
! AAGCCTTATCCCCACTAAGT+GGG + chr1_3:13905288-13905307 None:intergenic 45.0%
! AACTAGTTGAGTTGTCCTCC+TGG - chr1_3:13905573-13905592 Msa0105420:intron 45.0%
TGACGTACTTCAAAACCAGG+AGG + chr1_3:13905591-13905610 None:intergenic 45.0%
TCTATGACAAGGACCACGAT+TGG - chr1_3:13905653-13905672 Msa0105420:intron 45.0%
! CTTTGGAAATACGCCAATCG+TGG + chr1_3:13905669-13905688 None:intergenic 45.0%
CACGATTGGCGTATTTCCAA+AGG - chr1_3:13905667-13905686 Msa0105420:intron 45.0%
TGTTTGTGGTCATGCACCTT+TGG + chr1_3:13905686-13905705 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr1_3:13905992-13906011 Msa0105420:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr1_3:13905993-13906012 Msa0105420:intron 45.0%
GCAATGTTTCCATGTGTCAC+TGG - chr1_3:13906343-13906362 Msa0105420:intron 45.0%
GACATCAATCCAGTGACACA+TGG + chr1_3:13906355-13906374 None:intergenic 45.0%
AAGGACTCGTATGAGATCGT+CGG + chr1_3:13906459-13906478 None:intergenic 45.0%
CAAAGGAGGCTTTACTGCAA+AGG + chr1_3:13906478-13906497 None:intergenic 45.0%
GCTTCCACTTCCATGTCAAA+TGG + chr1_3:13906772-13906791 None:intergenic 45.0%
! GGAAGCTTATTTCTTGGCGA+AGG - chr1_3:13906786-13906805 Msa0105420:intron 45.0%
! AGCTTATTTCTTGGCGAAGG+AGG - chr1_3:13906789-13906808 Msa0105420:intron 45.0%
TATTTCTTGGCGAAGGAGGA+TGG - chr1_3:13906793-13906812 Msa0105420:intron 45.0%
TCAGGTGGAGTGGTCTAAAA+AGG - chr1_3:13906956-13906975 Msa0105420:intron 45.0%
GTGGAGTGGTCTAAAAAGGA+TGG - chr1_3:13906960-13906979 Msa0105420:intron 45.0%
ATGTCAGGAATGCTGCATTG+AGG + chr1_3:13907383-13907402 None:intergenic 45.0%
AATGCAGCATTCCTGACATC+TGG - chr1_3:13907384-13907403 Msa0105420:intron 45.0%
GAGAAACAGAACCAGATGTC+AGG + chr1_3:13907398-13907417 None:intergenic 45.0%
TGCTCCGTGTTTACGTTTGT+TGG - chr1_3:13907816-13907835 Msa0105420:intron 45.0%
! ACGTTTGTTGGATAAGTGGG+CGG - chr1_3:13907828-13907847 Msa0105420:intron 45.0%
TAGCCTTCAATTGGAGGTTG+AGG - chr1_3:13908086-13908105 Msa0105420:intron 45.0%
CTACCTCAACCTCCAATTGA+AGG + chr1_3:13908092-13908111 None:intergenic 45.0%
ACAGATATGGCAAGTAGGAG+TGG + chr1_3:13908255-13908274 None:intergenic 45.0%
CTCCTACTTGCCATATCTGT+AGG - chr1_3:13908255-13908274 Msa0105420:intron 45.0%
ACCCTACAGATATGGCAAGT+AGG + chr1_3:13908260-13908279 None:intergenic 45.0%
GCACTTCCCTAATGCCAAAA+TGG - chr1_3:13908455-13908474 Msa0105420:intron 45.0%
!! AAGGGGCCATTTTGGCATTA+GGG + chr1_3:13908464-13908483 None:intergenic 45.0%
TCTGAGGATTTGACTGGGAA+GGG + chr1_3:13908482-13908501 None:intergenic 45.0%
ATCTGAGGATTTGACTGGGA+AGG + chr1_3:13908483-13908502 None:intergenic 45.0%
! ACAAGGTGAATCTTTAGGGG+GGG + chr1_3:13908672-13908691 None:intergenic 45.0%
! GACAAGGTGAATCTTTAGGG+GGG + chr1_3:13908673-13908692 None:intergenic 45.0%
GGACAAGGTGAATCTTTAGG+GGG + chr1_3:13908674-13908693 None:intergenic 45.0%
GGATATCATAAGTGTCCACC+TGG - chr1_3:13908704-13908723 Msa0105420:intron 45.0%
! TACTTCAAGTTATGGGACCC+AGG + chr1_3:13908725-13908744 None:intergenic 45.0%
AGTATGGGGTCAGAGATAAG+GGG + chr1_3:13908866-13908885 None:intergenic 45.0%
GAGTATGGGGTCAGAGATAA+GGG + chr1_3:13908867-13908886 None:intergenic 45.0%
TGAGTATGGGGTCAGAGATA+AGG + chr1_3:13908868-13908887 None:intergenic 45.0%
ACCGCGATAGGAAAAGAGAA+AGG + chr1_3:13909016-13909035 None:intergenic 45.0%
! TTTCTCTTTTCCTATCGCGG+TGG - chr1_3:13909015-13909034 Msa0105420:intron 45.0%
! TTCTCTTTTCCTATCGCGGT+GGG - chr1_3:13909016-13909035 Msa0105420:intron 45.0%
TTTCCCTGGTCACTATCTTG+TGG - chr1_3:13909046-13909065 Msa0105420:intron 45.0%
CAACCACAAGATAGTGACCA+GGG + chr1_3:13909052-13909071 None:intergenic 45.0%
TCAACCACAAGATAGTGACC+AGG + chr1_3:13909053-13909072 None:intergenic 45.0%
ATGAACCTTGAGTCGTCAAC+CGG - chr1_3:13909080-13909099 Msa0105420:intron 45.0%
AACCGGTCCAATTCAGTATC+AGG - chr1_3:13909097-13909116 Msa0105420:intron 45.0%
GCCTATGTCTGATGAAGAAG+AGG + chr1_3:13909125-13909144 None:intergenic 45.0%
GGCATGATATCCCGATATTC+CGG - chr1_3:13909142-13909161 Msa0105420:intron 45.0%
! GATGCGTTGATGTTACTCAG+AGG + chr1_3:13909259-13909278 None:intergenic 45.0%
GCAAAGAAGATGCATACTGG+TGG + chr1_3:13909342-13909361 None:intergenic 45.0%
ATGGAGTTCCGAGTGTTTGA+TGG + chr1_3:13909364-13909383 None:intergenic 45.0%
TGGTACCGTTATGGCAGAAA+TGG + chr1_3:13909383-13909402 None:intergenic 45.0%
TGGTATCAGAGCAACGATCT+CGG + chr1_3:13909411-13909430 None:intergenic 45.0%
!! AAGGGGCCATTTTGGCATTA+GGG + chr1_3:13908464-13908483 None:intergenic 45.0%
TCTGAGGATTTGACTGGGAA+GGG + chr1_3:13908482-13908501 None:intergenic 45.0%
ATCTGAGGATTTGACTGGGA+AGG + chr1_3:13908483-13908502 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+AGG - chr1_3:13909870-13909889 Msa0105420:intron 45.0%
AGAGGAAAAGGGAGGACATT+GGG - chr1_3:13909878-13909897 Msa0105420:intron 45.0%
!! GGACTAGTTGTTTACCAGCA+TGG + chr1_3:13910207-13910226 None:intergenic 45.0%
TGCTGGTAAACAACTAGTCC+TGG - chr1_3:13910207-13910226 Msa0105420:intron 45.0%
!! TTTTTCCCCAGGTTGAGACT+AGG - chr1_3:13910257-13910276 Msa0105420:intron 45.0%
AAGAGTCCTAGTCTCAACCT+GGG + chr1_3:13910266-13910285 None:intergenic 45.0%
CTATGCTGAAAGAAGCTGTG+CGG - chr1_3:13910395-13910414 Msa0105420:intron 45.0%
ATGTTGACCTCAAGACATGC+GGG + chr1_3:13910748-13910767 None:intergenic 45.0%
GGTCAGTTGGTTAGTAAGAG+AGG - chr1_3:13910895-13910914 Msa0105420:intron 45.0%
TAGTAACATTGCCTGAAGCC+TGG + chr1_3:13911267-13911286 None:intergenic 45.0%
! CTGATATGGGTTTTCTGCAG+TGG - chr1_3:13911589-13911608 Msa0105420:intron 45.0%
!!! ACGCGGCATATGCCTTATTT+TGG - chr1_3:13911745-13911764 Msa0105420:intron 45.0%
!! GCCATCAATTTGCTAGATGG+TGG - chr1_3:13911890-13911909 Msa0105420:five_prime_UTR 45.0%
GCCACCATCTAGCAAATTGA+TGG + chr1_3:13911894-13911913 None:intergenic 45.0%
AGTAAAAACCTGAGTGGAGG+TGG + chr1_3:13904762-13904781 None:intergenic 45.0%
TCTTCTGTCTTCGACTAGAC+GGG - chr1_3:13905031-13905050 Msa0105420:intron 45.0%
ATGACAACGCTAGAGAGAGT+TGG - chr1_3:13905066-13905085 Msa0105420:intron 45.0%
TGACAACGCTAGAGAGAGTT+GGG - chr1_3:13905067-13905086 Msa0105420:intron 45.0%
! AAGCCTTATCCCCACTAAGT+GGG + chr1_3:13905288-13905307 None:intergenic 45.0%
! AACTAGTTGAGTTGTCCTCC+TGG - chr1_3:13905573-13905592 Msa0105420:intron 45.0%
TGACGTACTTCAAAACCAGG+AGG + chr1_3:13905591-13905610 None:intergenic 45.0%
TCTATGACAAGGACCACGAT+TGG - chr1_3:13905653-13905672 Msa0105420:intron 45.0%
! CTTTGGAAATACGCCAATCG+TGG + chr1_3:13905669-13905688 None:intergenic 45.0%
CACGATTGGCGTATTTCCAA+AGG - chr1_3:13905667-13905686 Msa0105420:intron 45.0%
TGTTTGTGGTCATGCACCTT+TGG + chr1_3:13905686-13905705 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr1_3:13905992-13906011 Msa0105420:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr1_3:13905993-13906012 Msa0105420:intron 45.0%
GCAATGTTTCCATGTGTCAC+TGG - chr1_3:13906343-13906362 Msa0105420:intron 45.0%
GACATCAATCCAGTGACACA+TGG + chr1_3:13906355-13906374 None:intergenic 45.0%
AAGGACTCGTATGAGATCGT+CGG + chr1_3:13906459-13906478 None:intergenic 45.0%
CAAAGGAGGCTTTACTGCAA+AGG + chr1_3:13906478-13906497 None:intergenic 45.0%
GCTTCCACTTCCATGTCAAA+TGG + chr1_3:13906772-13906791 None:intergenic 45.0%
! GGAAGCTTATTTCTTGGCGA+AGG - chr1_3:13906786-13906805 Msa0105420:intron 45.0%
! AGCTTATTTCTTGGCGAAGG+AGG - chr1_3:13906789-13906808 Msa0105420:intron 45.0%
TATTTCTTGGCGAAGGAGGA+TGG - chr1_3:13906793-13906812 Msa0105420:intron 45.0%
TCAGGTGGAGTGGTCTAAAA+AGG - chr1_3:13906956-13906975 Msa0105420:intron 45.0%
GTGGAGTGGTCTAAAAAGGA+TGG - chr1_3:13906960-13906979 Msa0105420:intron 45.0%
ATGTCAGGAATGCTGCATTG+AGG + chr1_3:13907383-13907402 None:intergenic 45.0%
AATGCAGCATTCCTGACATC+TGG - chr1_3:13907384-13907403 Msa0105420:intron 45.0%
GAGAAACAGAACCAGATGTC+AGG + chr1_3:13907398-13907417 None:intergenic 45.0%
TGCTCCGTGTTTACGTTTGT+TGG - chr1_3:13907816-13907835 Msa0105420:intron 45.0%
! ACGTTTGTTGGATAAGTGGG+CGG - chr1_3:13907828-13907847 Msa0105420:intron 45.0%
TAGCCTTCAATTGGAGGTTG+AGG - chr1_3:13908086-13908105 Msa0105420:intron 45.0%
CTACCTCAACCTCCAATTGA+AGG + chr1_3:13908092-13908111 None:intergenic 45.0%
ACAGATATGGCAAGTAGGAG+TGG + chr1_3:13908255-13908274 None:intergenic 45.0%
CTCCTACTTGCCATATCTGT+AGG - chr1_3:13908255-13908274 Msa0105420:intron 45.0%
ACCCTACAGATATGGCAAGT+AGG + chr1_3:13908260-13908279 None:intergenic 45.0%
GCACTTCCCTAATGCCAAAA+TGG - chr1_3:13908455-13908474 Msa0105420:intron 45.0%
!! AAGGGGCCATTTTGGCATTA+GGG + chr1_3:13908464-13908483 None:intergenic 45.0%
TCTGAGGATTTGACTGGGAA+GGG + chr1_3:13908482-13908501 None:intergenic 45.0%
ATCTGAGGATTTGACTGGGA+AGG + chr1_3:13908483-13908502 None:intergenic 45.0%
! ACAAGGTGAATCTTTAGGGG+GGG + chr1_3:13908672-13908691 None:intergenic 45.0%
! GACAAGGTGAATCTTTAGGG+GGG + chr1_3:13908673-13908692 None:intergenic 45.0%
GGACAAGGTGAATCTTTAGG+GGG + chr1_3:13908674-13908693 None:intergenic 45.0%
GGATATCATAAGTGTCCACC+TGG - chr1_3:13908704-13908723 Msa0105420:intron 45.0%
! TACTTCAAGTTATGGGACCC+AGG + chr1_3:13908725-13908744 None:intergenic 45.0%
AGTATGGGGTCAGAGATAAG+GGG + chr1_3:13908866-13908885 None:intergenic 45.0%
GAGTATGGGGTCAGAGATAA+GGG + chr1_3:13908867-13908886 None:intergenic 45.0%
TGAGTATGGGGTCAGAGATA+AGG + chr1_3:13908868-13908887 None:intergenic 45.0%
ACCGCGATAGGAAAAGAGAA+AGG + chr1_3:13909016-13909035 None:intergenic 45.0%
! TTTCTCTTTTCCTATCGCGG+TGG - chr1_3:13909015-13909034 Msa0105420:intron 45.0%
! TTCTCTTTTCCTATCGCGGT+GGG - chr1_3:13909016-13909035 Msa0105420:intron 45.0%
TTTCCCTGGTCACTATCTTG+TGG - chr1_3:13909046-13909065 Msa0105420:intron 45.0%
CAACCACAAGATAGTGACCA+GGG + chr1_3:13909052-13909071 None:intergenic 45.0%
TCAACCACAAGATAGTGACC+AGG + chr1_3:13909053-13909072 None:intergenic 45.0%
ATGAACCTTGAGTCGTCAAC+CGG - chr1_3:13909080-13909099 Msa0105420:intron 45.0%
AACCGGTCCAATTCAGTATC+AGG - chr1_3:13909097-13909116 Msa0105420:intron 45.0%
GCCTATGTCTGATGAAGAAG+AGG + chr1_3:13909125-13909144 None:intergenic 45.0%
GGCATGATATCCCGATATTC+CGG - chr1_3:13909142-13909161 Msa0105420:intron 45.0%
! GATGCGTTGATGTTACTCAG+AGG + chr1_3:13909259-13909278 None:intergenic 45.0%
GCAAAGAAGATGCATACTGG+TGG + chr1_3:13909342-13909361 None:intergenic 45.0%
ATGGAGTTCCGAGTGTTTGA+TGG + chr1_3:13909364-13909383 None:intergenic 45.0%
TGGTACCGTTATGGCAGAAA+TGG + chr1_3:13909383-13909402 None:intergenic 45.0%
TGGTATCAGAGCAACGATCT+CGG + chr1_3:13909411-13909430 None:intergenic 45.0%
!! AAGGGGCCATTTTGGCATTA+GGG + chr1_3:13908464-13908483 None:intergenic 45.0%
TCTGAGGATTTGACTGGGAA+GGG + chr1_3:13908482-13908501 None:intergenic 45.0%
ATCTGAGGATTTGACTGGGA+AGG + chr1_3:13908483-13908502 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+AGG - chr1_3:13909870-13909889 Msa0105420:intron 45.0%
AGAGGAAAAGGGAGGACATT+GGG - chr1_3:13909878-13909897 Msa0105420:intron 45.0%
!! GGACTAGTTGTTTACCAGCA+TGG + chr1_3:13910207-13910226 None:intergenic 45.0%
TGCTGGTAAACAACTAGTCC+TGG - chr1_3:13910207-13910226 Msa0105420:intron 45.0%
!! TTTTTCCCCAGGTTGAGACT+AGG - chr1_3:13910257-13910276 Msa0105420:intron 45.0%
AAGAGTCCTAGTCTCAACCT+GGG + chr1_3:13910266-13910285 None:intergenic 45.0%
CTATGCTGAAAGAAGCTGTG+CGG - chr1_3:13910395-13910414 Msa0105420:intron 45.0%
ATGTTGACCTCAAGACATGC+GGG + chr1_3:13910748-13910767 None:intergenic 45.0%
GGTCAGTTGGTTAGTAAGAG+AGG - chr1_3:13910895-13910914 Msa0105420:intron 45.0%
TAGTAACATTGCCTGAAGCC+TGG + chr1_3:13911267-13911286 None:intergenic 45.0%
! CTGATATGGGTTTTCTGCAG+TGG - chr1_3:13911589-13911608 Msa0105420:intron 45.0%
!!! ACGCGGCATATGCCTTATTT+TGG - chr1_3:13911745-13911764 Msa0105420:intron 45.0%
!! GCCATCAATTTGCTAGATGG+TGG - chr1_3:13911890-13911909 Msa0105420:five_prime_UTR 45.0%
GCCACCATCTAGCAAATTGA+TGG + chr1_3:13911894-13911913 None:intergenic 45.0%
!! TTATTATATTGATAAAAAAA+TGG + chr1_3:13907585-13907604 None:intergenic 5.0%
!! TTATTATATTGATAAAAAAA+TGG + chr1_3:13907585-13907604 None:intergenic 5.0%
GTAGAAACGAATGGGTGGAG+TGG - chr1_3:13904504-13904523 Msa0105420:three_prime_UTR 50.0%
AATGGGTGGAGTGGAGTAAC+TGG - chr1_3:13904513-13904532 Msa0105420:three_prime_UTR 50.0%
ATGGGTGGAGTGGAGTAACT+GGG - chr1_3:13904514-13904533 Msa0105420:three_prime_UTR 50.0%
GCGAGTAAAAACCTGAGTGG+AGG + chr1_3:13904765-13904784 None:intergenic 50.0%
GGAGCGAGTAAAAACCTGAG+TGG + chr1_3:13904768-13904787 None:intergenic 50.0%
TTATCCCCACTAAGTGGGGT+CGG + chr1_3:13905283-13905302 None:intergenic 50.0%
! AGCCTTATCCCCACTAAGTG+GGG + chr1_3:13905287-13905306 None:intergenic 50.0%
! CAAGCCTTATCCCCACTAAG+TGG + chr1_3:13905289-13905308 None:intergenic 50.0%
CACTTAGTGGGGATAAGGCT+TGG - chr1_3:13905287-13905306 Msa0105420:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr1_3:13905994-13906013 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr1_3:13905991-13906010 Msa0105420:intron 50.0%
TGTAGTCGACCCCACTTAGT+GGG + chr1_3:13906005-13906024 None:intergenic 50.0%
ATGTAGTCGACCCCACTTAG+TGG + chr1_3:13906006-13906025 None:intergenic 50.0%
! TTGGCTCTTGCAGAAGATGC+TGG - chr1_3:13906531-13906550 Msa0105420:intron 50.0%
TGGCTCTTGCAGAAGATGCT+GGG - chr1_3:13906532-13906551 Msa0105420:intron 50.0%
GGCCACCATTCCATTTGACA+TGG - chr1_3:13906759-13906778 Msa0105420:intron 50.0%
TTTCTCTTGGATACTGGCCG+AGG - chr1_3:13907412-13907431 Msa0105420:intron 50.0%
GATATGGCAAGTAGGAGTGG+AGG + chr1_3:13908252-13908271 None:intergenic 50.0%
!! GAAGGGGCCATTTTGGCATT+AGG + chr1_3:13908465-13908484 None:intergenic 50.0%
CTGAGGATTTGACTGGGAAG+GGG + chr1_3:13908481-13908500 None:intergenic 50.0%
GGGCATCTGAGGATTTGACT+GGG + chr1_3:13908487-13908506 None:intergenic 50.0%
GGAGAGAAGGGAAGATTGAG+GGG + chr1_3:13908507-13908526 None:intergenic 50.0%
GGGAGAGAAGGGAAGATTGA+GGG + chr1_3:13908508-13908527 None:intergenic 50.0%
GATTCACCTTGTCCTCAAGG+TGG - chr1_3:13908680-13908699 Msa0105420:intron 50.0%
TATCCTCCACCTTGAGGACA+AGG + chr1_3:13908689-13908708 None:intergenic 50.0%
! TTCAAGTTATGGGACCCAGG+TGG + chr1_3:13908722-13908741 None:intergenic 50.0%
TTTCCTATCGCGGTGGGATT+TGG - chr1_3:13909022-13909041 Msa0105420:intron 50.0%
AATCCAAATCCCACCGCGAT+AGG + chr1_3:13909028-13909047 None:intergenic 50.0%
GACGCCATCAACAGGTTAGT+TGG + chr1_3:13909204-13909223 None:intergenic 50.0%
GATTCCACCAGTGTGACCAT+TGG - chr1_3:13909224-13909243 Msa0105420:intron 50.0%
TCGGAACTGTGGTACCGTTA+TGG + chr1_3:13909392-13909411 None:intergenic 50.0%
GCACCTCCCTAATGCCAAAA+TGG - chr1_3:13909517-13909536 Msa0105420:intron 50.0%
!! GAAGGGGCCATTTTGGCATT+AGG + chr1_3:13908465-13908484 None:intergenic 50.0%
CTGAGGATTTGACTGGGAAG+GGG + chr1_3:13908481-13908500 None:intergenic 50.0%
GGGCATCTGAGGATTTGACT+GGG + chr1_3:13908487-13908506 None:intergenic 50.0%
GGAGAGAAGGGAAGATTGAG+GGG + chr1_3:13908507-13908526 None:intergenic 50.0%
GGGAGAGAAGGGAAGATTGA+GGG + chr1_3:13908508-13908527 None:intergenic 50.0%
CAGAGGAAAAGGGAGGACAT+TGG - chr1_3:13909877-13909896 Msa0105420:intron 50.0%
CTAGGCTCTCTAACTCCTAG+AGG - chr1_3:13909931-13909950 Msa0105420:intron 50.0%
GCTCTCTAACTCCTAGAGGT+TGG - chr1_3:13909935-13909954 Msa0105420:intron 50.0%
AGAGTCCTAGTCTCAACCTG+GGG + chr1_3:13910265-13910284 None:intergenic 50.0%
CAAGAGTCCTAGTCTCAACC+TGG + chr1_3:13910267-13910286 None:intergenic 50.0%
GGTTGAGACTAGGACTCTTG+AGG - chr1_3:13910267-13910286 Msa0105420:intron 50.0%
GACTAGGACTCTTGAGGAAG+TGG - chr1_3:13910273-13910292 Msa0105420:intron 50.0%
! AAGCTGTGCGGTTGGTCAAT+GGG - chr1_3:13910407-13910426 Msa0105420:intron 50.0%
! CTTAAAGTTGGAAGGCGCAC+CGG - chr1_3:13911673-13911692 Msa0105420:intron 50.0%
ATATGCCGCGTAGTGAAGAC+CGG + chr1_3:13911736-13911755 None:intergenic 50.0%
GTAGAAACGAATGGGTGGAG+TGG - chr1_3:13904504-13904523 Msa0105420:three_prime_UTR 50.0%
AATGGGTGGAGTGGAGTAAC+TGG - chr1_3:13904513-13904532 Msa0105420:three_prime_UTR 50.0%
ATGGGTGGAGTGGAGTAACT+GGG - chr1_3:13904514-13904533 Msa0105420:three_prime_UTR 50.0%
GCGAGTAAAAACCTGAGTGG+AGG + chr1_3:13904765-13904784 None:intergenic 50.0%
GGAGCGAGTAAAAACCTGAG+TGG + chr1_3:13904768-13904787 None:intergenic 50.0%
TTATCCCCACTAAGTGGGGT+CGG + chr1_3:13905283-13905302 None:intergenic 50.0%
! AGCCTTATCCCCACTAAGTG+GGG + chr1_3:13905287-13905306 None:intergenic 50.0%
! CAAGCCTTATCCCCACTAAG+TGG + chr1_3:13905289-13905308 None:intergenic 50.0%
CACTTAGTGGGGATAAGGCT+TGG - chr1_3:13905287-13905306 Msa0105420:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr1_3:13905994-13906013 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr1_3:13905991-13906010 Msa0105420:intron 50.0%
TGTAGTCGACCCCACTTAGT+GGG + chr1_3:13906005-13906024 None:intergenic 50.0%
ATGTAGTCGACCCCACTTAG+TGG + chr1_3:13906006-13906025 None:intergenic 50.0%
! TTGGCTCTTGCAGAAGATGC+TGG - chr1_3:13906531-13906550 Msa0105420:intron 50.0%
TGGCTCTTGCAGAAGATGCT+GGG - chr1_3:13906532-13906551 Msa0105420:intron 50.0%
GGCCACCATTCCATTTGACA+TGG - chr1_3:13906759-13906778 Msa0105420:intron 50.0%
TTTCTCTTGGATACTGGCCG+AGG - chr1_3:13907412-13907431 Msa0105420:intron 50.0%
GATATGGCAAGTAGGAGTGG+AGG + chr1_3:13908252-13908271 None:intergenic 50.0%
!! GAAGGGGCCATTTTGGCATT+AGG + chr1_3:13908465-13908484 None:intergenic 50.0%
CTGAGGATTTGACTGGGAAG+GGG + chr1_3:13908481-13908500 None:intergenic 50.0%
GGGCATCTGAGGATTTGACT+GGG + chr1_3:13908487-13908506 None:intergenic 50.0%
GGAGAGAAGGGAAGATTGAG+GGG + chr1_3:13908507-13908526 None:intergenic 50.0%
GGGAGAGAAGGGAAGATTGA+GGG + chr1_3:13908508-13908527 None:intergenic 50.0%
GATTCACCTTGTCCTCAAGG+TGG - chr1_3:13908680-13908699 Msa0105420:intron 50.0%
TATCCTCCACCTTGAGGACA+AGG + chr1_3:13908689-13908708 None:intergenic 50.0%
! TTCAAGTTATGGGACCCAGG+TGG + chr1_3:13908722-13908741 None:intergenic 50.0%
TTTCCTATCGCGGTGGGATT+TGG - chr1_3:13909022-13909041 Msa0105420:intron 50.0%
AATCCAAATCCCACCGCGAT+AGG + chr1_3:13909028-13909047 None:intergenic 50.0%
GACGCCATCAACAGGTTAGT+TGG + chr1_3:13909204-13909223 None:intergenic 50.0%
GATTCCACCAGTGTGACCAT+TGG - chr1_3:13909224-13909243 Msa0105420:intron 50.0%
TCGGAACTGTGGTACCGTTA+TGG + chr1_3:13909392-13909411 None:intergenic 50.0%
GCACCTCCCTAATGCCAAAA+TGG - chr1_3:13909517-13909536 Msa0105420:intron 50.0%
!! GAAGGGGCCATTTTGGCATT+AGG + chr1_3:13908465-13908484 None:intergenic 50.0%
CTGAGGATTTGACTGGGAAG+GGG + chr1_3:13908481-13908500 None:intergenic 50.0%
GGGCATCTGAGGATTTGACT+GGG + chr1_3:13908487-13908506 None:intergenic 50.0%
GGAGAGAAGGGAAGATTGAG+GGG + chr1_3:13908507-13908526 None:intergenic 50.0%
GGGAGAGAAGGGAAGATTGA+GGG + chr1_3:13908508-13908527 None:intergenic 50.0%
CAGAGGAAAAGGGAGGACAT+TGG - chr1_3:13909877-13909896 Msa0105420:intron 50.0%
CTAGGCTCTCTAACTCCTAG+AGG - chr1_3:13909931-13909950 Msa0105420:intron 50.0%
GCTCTCTAACTCCTAGAGGT+TGG - chr1_3:13909935-13909954 Msa0105420:intron 50.0%
AGAGTCCTAGTCTCAACCTG+GGG + chr1_3:13910265-13910284 None:intergenic 50.0%
CAAGAGTCCTAGTCTCAACC+TGG + chr1_3:13910267-13910286 None:intergenic 50.0%
GGTTGAGACTAGGACTCTTG+AGG - chr1_3:13910267-13910286 Msa0105420:intron 50.0%
GACTAGGACTCTTGAGGAAG+TGG - chr1_3:13910273-13910292 Msa0105420:intron 50.0%
! AAGCTGTGCGGTTGGTCAAT+GGG - chr1_3:13910407-13910426 Msa0105420:intron 50.0%
! CTTAAAGTTGGAAGGCGCAC+CGG - chr1_3:13911673-13911692 Msa0105420:intron 50.0%
ATATGCCGCGTAGTGAAGAC+CGG + chr1_3:13911736-13911755 None:intergenic 50.0%
CTAGGTTTCCACCTCCACTC+AGG - chr1_3:13904751-13904770 Msa0105420:three_prime_UTR 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr1_3:13905275-13905294 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr1_3:13905274-13905293 Msa0105420:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr1_3:13905275-13905294 Msa0105420:CDS 55.0%
GACCCCACTTAGTGGGGATA+AGG - chr1_3:13905282-13905301 Msa0105420:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr1_3:13905999-13906018 None:intergenic 55.0%
GGCTCTTGCAGAAGATGCTG+GGG - chr1_3:13906533-13906552 Msa0105420:intron 55.0%
GCAGAAGATGCTGGGGATCT+AGG - chr1_3:13906540-13906559 Msa0105420:intron 55.0%
AAGGAGGATGGCATCGTTGC+TGG - chr1_3:13906805-13906824 Msa0105420:intron 55.0%
TGGCAAGTAGGAGTGGAGGA+GGG + chr1_3:13908248-13908267 None:intergenic 55.0%
ATGGCAAGTAGGAGTGGAGG+AGG + chr1_3:13908249-13908268 None:intergenic 55.0%
! TGACTGGGAAGGGGCCATTT+TGG + chr1_3:13908472-13908491 None:intergenic 55.0%
! GGGGCATCTGAGGATTTGAC+TGG + chr1_3:13908488-13908507 None:intergenic 55.0%
!! GGAAGATTGAGGGGCATCTG+AGG + chr1_3:13908498-13908517 None:intergenic 55.0%
GGGGAGAGAAGGGAAGATTG+AGG + chr1_3:13908509-13908528 None:intergenic 55.0%
TCACCTTGTCCTCAAGGTGG+AGG - chr1_3:13908683-13908702 Msa0105420:intron 55.0%
CGGTGGGATTTGGATTTCCC+TGG - chr1_3:13909032-13909051 Msa0105420:intron 55.0%
TTGGACCGGTTGACGACTCA+AGG + chr1_3:13909088-13909107 None:intergenic 55.0%
GTGGAATCGACGCCATCAAC+AGG + chr1_3:13909212-13909231 None:intergenic 55.0%
CTGGTGGCTGCTATGCATTG+AGG + chr1_3:13909326-13909345 None:intergenic 55.0%
GAGCAACGATCTCGGAACTG+TGG + chr1_3:13909403-13909422 None:intergenic 55.0%
!! GGGCCATTTTGGCATTAGGG+AGG + chr1_3:13908461-13908480 None:intergenic 55.0%
! TGACTGGGAAGGGGCCATTT+TGG + chr1_3:13908472-13908491 None:intergenic 55.0%
! GGGGCATCTGAGGATTTGAC+TGG + chr1_3:13908488-13908507 None:intergenic 55.0%
!! GGAAGATTGAGGGGCATCTG+AGG + chr1_3:13908498-13908517 None:intergenic 55.0%
GGGGAGAGAAGGGAAGATTG+AGG + chr1_3:13908509-13908528 None:intergenic 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG - chr1_3:13909913-13909932 Msa0105420:intron 55.0%
CATGATATGGCGGTCCATGC+TGG - chr1_3:13910190-13910209 Msa0105420:intron 55.0%
GCTGAAAGAAGCTGTGCGGT+TGG - chr1_3:13910399-13910418 Msa0105420:intron 55.0%
! GAAGCTGTGCGGTTGGTCAA+TGG - chr1_3:13910406-13910425 Msa0105420:intron 55.0%
CAAGACATGCGGGCCACATT+TGG + chr1_3:13910738-13910757 None:intergenic 55.0%
AATGTGGCCCGCATGTCTTG+AGG - chr1_3:13910738-13910757 Msa0105420:intron 55.0%
CTAGGTTTCCACCTCCACTC+AGG - chr1_3:13904751-13904770 Msa0105420:three_prime_UTR 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr1_3:13905275-13905294 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr1_3:13905274-13905293 Msa0105420:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr1_3:13905275-13905294 Msa0105420:CDS 55.0%
GACCCCACTTAGTGGGGATA+AGG - chr1_3:13905282-13905301 Msa0105420:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr1_3:13905999-13906018 None:intergenic 55.0%
GGCTCTTGCAGAAGATGCTG+GGG - chr1_3:13906533-13906552 Msa0105420:intron 55.0%
GCAGAAGATGCTGGGGATCT+AGG - chr1_3:13906540-13906559 Msa0105420:intron 55.0%
AAGGAGGATGGCATCGTTGC+TGG - chr1_3:13906805-13906824 Msa0105420:intron 55.0%
TGGCAAGTAGGAGTGGAGGA+GGG + chr1_3:13908248-13908267 None:intergenic 55.0%
ATGGCAAGTAGGAGTGGAGG+AGG + chr1_3:13908249-13908268 None:intergenic 55.0%
! TGACTGGGAAGGGGCCATTT+TGG + chr1_3:13908472-13908491 None:intergenic 55.0%
! GGGGCATCTGAGGATTTGAC+TGG + chr1_3:13908488-13908507 None:intergenic 55.0%
!! GGAAGATTGAGGGGCATCTG+AGG + chr1_3:13908498-13908517 None:intergenic 55.0%
GGGGAGAGAAGGGAAGATTG+AGG + chr1_3:13908509-13908528 None:intergenic 55.0%
TCACCTTGTCCTCAAGGTGG+AGG - chr1_3:13908683-13908702 Msa0105420:intron 55.0%
CGGTGGGATTTGGATTTCCC+TGG - chr1_3:13909032-13909051 Msa0105420:intron 55.0%
TTGGACCGGTTGACGACTCA+AGG + chr1_3:13909088-13909107 None:intergenic 55.0%
GTGGAATCGACGCCATCAAC+AGG + chr1_3:13909212-13909231 None:intergenic 55.0%
CTGGTGGCTGCTATGCATTG+AGG + chr1_3:13909326-13909345 None:intergenic 55.0%
GAGCAACGATCTCGGAACTG+TGG + chr1_3:13909403-13909422 None:intergenic 55.0%
!! GGGCCATTTTGGCATTAGGG+AGG + chr1_3:13908461-13908480 None:intergenic 55.0%
! TGACTGGGAAGGGGCCATTT+TGG + chr1_3:13908472-13908491 None:intergenic 55.0%
! GGGGCATCTGAGGATTTGAC+TGG + chr1_3:13908488-13908507 None:intergenic 55.0%
!! GGAAGATTGAGGGGCATCTG+AGG + chr1_3:13908498-13908517 None:intergenic 55.0%
GGGGAGAGAAGGGAAGATTG+AGG + chr1_3:13908509-13908528 None:intergenic 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG - chr1_3:13909913-13909932 Msa0105420:intron 55.0%
CATGATATGGCGGTCCATGC+TGG - chr1_3:13910190-13910209 Msa0105420:intron 55.0%
GCTGAAAGAAGCTGTGCGGT+TGG - chr1_3:13910399-13910418 Msa0105420:intron 55.0%
! GAAGCTGTGCGGTTGGTCAA+TGG - chr1_3:13910406-13910425 Msa0105420:intron 55.0%
CAAGACATGCGGGCCACATT+TGG + chr1_3:13910738-13910757 None:intergenic 55.0%
AATGTGGCCCGCATGTCTTG+AGG - chr1_3:13910738-13910757 Msa0105420:intron 55.0%
GTAGCCGACCCCACTTAGTG+GGG - chr1_3:13905276-13905295 Msa0105420:CDS 60.0%
GCAAGTAGGAGTGGAGGAGG+GGG + chr1_3:13908246-13908265 None:intergenic 60.0%
GGCAAGTAGGAGTGGAGGAG+GGG + chr1_3:13908247-13908266 None:intergenic 60.0%
CTCGCCAATGGTCACACTGG+TGG + chr1_3:13909231-13909250 None:intergenic 60.0%
GTGCTCGCCAATGGTCACAC+TGG + chr1_3:13909234-13909253 None:intergenic 60.0%
TCAGAGGTCGTGCTCGCCAA+TGG + chr1_3:13909243-13909262 None:intergenic 60.0%
CCTTGCCGGTCTTCACTACG+CGG - chr1_3:13911728-13911747 Msa0105420:intron 60.0%
GTAGCCGACCCCACTTAGTG+GGG - chr1_3:13905276-13905295 Msa0105420:CDS 60.0%
GCAAGTAGGAGTGGAGGAGG+GGG + chr1_3:13908246-13908265 None:intergenic 60.0%
GGCAAGTAGGAGTGGAGGAG+GGG + chr1_3:13908247-13908266 None:intergenic 60.0%
CTCGCCAATGGTCACACTGG+TGG + chr1_3:13909231-13909250 None:intergenic 60.0%
GTGCTCGCCAATGGTCACAC+TGG + chr1_3:13909234-13909253 None:intergenic 60.0%
TCAGAGGTCGTGCTCGCCAA+TGG + chr1_3:13909243-13909262 None:intergenic 60.0%
CCTTGCCGGTCTTCACTACG+CGG - chr1_3:13911728-13911747 Msa0105420:intron 60.0%
CCGCGTAGTGAAGACCGGCA+AGG + chr1_3:13911731-13911750 None:intergenic 65.0%
CCGCGTAGTGAAGACCGGCA+AGG + chr1_3:13911731-13911750 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 13904454 13912110 13904454 ID=Msa0105420;Name=Msa0105420
chr1_3 mRNA 13904454 13912110 13904454 ID=Msa0105420-mRNA-1;Parent=Msa0105420;Name=Msa0105420-mRNA-1;_AED=0.07;_eAED=0.07;_QI=233|0.88|1|1|1|1|10|405|362
chr1_3 exon 13904454 13904955 13904454 ID=Msa0105420-mRNA-1:exon:5475;Parent=Msa0105420-mRNA-1
chr1_3 exon 13905229 13905296 13905229 ID=Msa0105420-mRNA-1:exon:5474;Parent=Msa0105420-mRNA-1
chr1_3 exon 13906120 13906296 13906120 ID=Msa0105420-mRNA-1:exon:5473;Parent=Msa0105420-mRNA-1
chr1_3 exon 13908457 13908609 13908457 ID=Msa0105420-mRNA-1:exon:5472;Parent=Msa0105420-mRNA-1
chr1_3 exon 13908715 13908798 13908715 ID=Msa0105420-mRNA-1:exon:5471;Parent=Msa0105420-mRNA-1
chr1_3 exon 13909343 13909425 13909343 ID=Msa0105420-mRNA-1:exon:5470;Parent=Msa0105420-mRNA-1
chr1_3 exon 13909541 13909604 13909541 ID=Msa0105420-mRNA-1:exon:5469;Parent=Msa0105420-mRNA-1
chr1_3 exon 13909688 13909821 13909688 ID=Msa0105420-mRNA-1:exon:5468;Parent=Msa0105420-mRNA-1
chr1_3 exon 13910003 13910145 13910003 ID=Msa0105420-mRNA-1:exon:5467;Parent=Msa0105420-mRNA-1
chr1_3 exon 13911792 13912110 13911792 ID=Msa0105420-mRNA-1:exon:5466;Parent=Msa0105420-mRNA-1
chr1_3 five_prime_UTR 13911878 13912110 13911878 ID=Msa0105420-mRNA-1:five_prime_utr;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13911792 13911877 13911792 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13910003 13910145 13910003 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13909688 13909821 13909688 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13909541 13909604 13909541 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13909343 13909425 13909343 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13908715 13908798 13908715 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13908457 13908609 13908457 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13906120 13906296 13906120 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13905229 13905296 13905229 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 CDS 13904859 13904955 13904859 ID=Msa0105420-mRNA-1:cds;Parent=Msa0105420-mRNA-1
chr1_3 three_prime_UTR 13904454 13904858 13904454 ID=Msa0105420-mRNA-1:three_prime_utr;Parent=Msa0105420-mRNA-1
Gene Sequence

>Msa0105420

ATGTTTCTTACCTACAAACAAGGTTACTTGTCACCTCAACCATTTCTCATCAGAGACATAACTTCTAGGTTTCCACCTCCACTCAGGAGCATTGTTAAAATGTCAGCGACTGAAGTCACAAATCCGACGATCTCATACGAGTCCTTTGCAGTAAAGCCTCCTTTGCATCCTACTTATGATTTGAAGGGCATTATAAAGTTGGCTCTTGCAGAAGATGCTGGGGATCTAGGTGATATAACATGCTTGGCCACCATTCCATTTGACATGGAAGTGGAAGCTTATTTCTTGGCGAAGGAGGATGGCATCGTTGCTGGAATTGCACTTGCAGAGATGATATTTAATGAGGTTGATCCTTCTTTAAAGGTGGAGTGGTCTAAAAAGGATGGAGATTTTGTCCATAAAGGACTACAGTTTGGAAAAGTTCGTGGACGAGCACATAACATTGTTGTAGCTGAAAGGGTAGTGCTAAACTTTATGCAGAGGATGAGTGGCATTGCAACTTTAACCAAGGCAATGGCAAATGCAGCATCGCCTGCATATATATTGGAGACTAGAAAAACTGCTCCGTGTTTACGTTTGTTGGATAAGTGGGCGGTATTAATTGGTGGAGGACGAAATCATAGAATGGGTTTGTTTGACATGGTTATGATAAAAGATAATCATATATCAACAGCTGGAGGTGTTACAAATGCCCTAAAAGCTGTTGACCTGTATCTGGAGAAAAATAGCCTTCAATTGGAGGTTGAGGTTGAGACTAGGACTCTTGAGGAAGTGGAAGAAGTATTACAGTATGCATCTCAAACAAAGACTTCTTTAACTCGAATAATGCTGGATAATATGGTTGTACCTTTATCAAACGGAGATGTTGACATATCTATGCTGAAAGAAGCTGTGCGGTTGGTCAATGGGAGATTTGAAACTGAGGCTTCAGGCAATGTTACTATAGATACAGTACATAAAATCGGGCAAAGTGGAGTAACCTACATTTCTAGTGGTTCTTTGACTCACTCAGTGAAAGCACTTGACATCTCCCTCAAAATTGATACTGAATTGGCGCTTAAAGTTGGAAGGCGCACCGGAAGAGCTTGA

Protein sequence

>Msa0105420

MFLTYKQGYLSPQPFLIRDITSRFPPPLRSIVKMSATEVTNPTISYESFAVKPPLHPTYDLKGIIKLALAEDAGDLGDITCLATIPFDMEVEAYFLAKEDGIVAGIALAEMIFNEVDPSLKVEWSKKDGDFVHKGLQFGKVRGRAHNIVVAERVVLNFMQRMSGIATLTKAMANAASPAYILETRKTAPCLRLLDKWAVLIGGGRNHRMGLFDMVMIKDNHISTAGGVTNALKAVDLYLEKNSLQLEVEVETRTLEEVEEVLQYASQTKTSLTRIMLDNMVVPLSNGDVDISMLKEAVRLVNGRFETEASGNVTIDTVHKIGQSGVTYISSGSLTHSVKALDISLKIDTELALKVGRRTGRA*