Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466460 | KEH23501.1 | 100.000 | 182 | 0 | 0 | 1 | 182 | 132 | 313 | 1.26e-126 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466460 | sp|Q9FI43|MAPC2_ARATH | 69.780 | 182 | 54 | 1 | 1 | 182 | 137 | 317 | 4.40e-87 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466460 | A0A072U264 | 100.000 | 182 | 0 | 0 | 1 | 182 | 132 | 313 | 6.01e-127 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008340 | Msa1466460 | 0.834798 | 2.433097e-56 | -8.615850e-47 |
| Msa0011720 | Msa1466460 | 0.819025 | 1.441895e-52 | -8.615850e-47 |
| Msa0012440 | Msa1466460 | 0.813876 | 2.050303e-51 | -8.615850e-47 |
| Msa0015940 | Msa1466460 | 0.830006 | 3.744849e-55 | -8.615850e-47 |
| Msa0024680 | Msa1466460 | 0.809762 | 1.612077e-50 | -8.615850e-47 |
| Msa0027390 | Msa1466460 | 0.814350 | 1.611312e-51 | -8.615850e-47 |
| Msa0032370 | Msa1466460 | 0.859314 | 4.507262e-63 | -8.615850e-47 |
| Msa0044020 | Msa1466460 | 0.802658 | 5.052679e-49 | -8.615850e-47 |
| Msa0047980 | Msa1466460 | 0.800922 | 1.148141e-48 | -8.615850e-47 |
| Msa0050730 | Msa1466460 | 0.834590 | 2.745218e-56 | -8.615850e-47 |
| Msa0050760 | Msa1466460 | 0.833029 | 6.742719e-56 | -8.615850e-47 |
| Msa0057240 | Msa1466460 | 0.823177 | 1.594024e-53 | -8.615850e-47 |
| Msa0079400 | Msa1466460 | 0.800565 | 1.357760e-48 | -8.615850e-47 |
| Msa0089360 | Msa1466460 | 0.806493 | 8.007468e-50 | -8.615850e-47 |
| Msa0094010 | Msa1466460 | 0.801861 | 7.371653e-49 | -8.615850e-47 |
| Msa0095380 | Msa1466460 | 0.801435 | 9.016885e-49 | -8.615850e-47 |
| Msa0103180 | Msa1466460 | 0.805393 | 1.364082e-49 | -8.615850e-47 |
| Msa0105420 | Msa1466460 | 0.827681 | 1.367994e-54 | -8.615850e-47 |
| Msa0109950 | Msa1466460 | 0.805169 | 1.519541e-49 | -8.615850e-47 |
| Msa0110820 | Msa1466460 | 0.800642 | 1.309652e-48 | -8.615850e-47 |
| Msa0113160 | Msa1466460 | 0.802135 | 6.476807e-49 | -8.615850e-47 |
| Msa0114540 | Msa1466460 | -0.823445 | 1.380108e-53 | -8.615850e-47 |
| Msa0120330 | Msa1466460 | 0.825814 | 3.817681e-54 | -8.615850e-47 |
| Msa1344850 | Msa1466460 | 0.800992 | 1.110854e-48 | -8.615850e-47 |
| Msa1348360 | Msa1466460 | 0.847557 | 1.072751e-59 | -8.615850e-47 |
| Msa1358040 | Msa1466460 | 0.825551 | 4.407829e-54 | -8.615850e-47 |
| Msa1362510 | Msa1466460 | 0.853379 | 2.484596e-61 | -8.615850e-47 |
| Msa1365150 | Msa1466460 | 0.812886 | 3.382620e-51 | -8.615850e-47 |
| Msa1367880 | Msa1466460 | 0.811186 | 7.938983e-51 | -8.615850e-47 |
| Msa1373330 | Msa1466460 | 0.801143 | 1.034871e-48 | -8.615850e-47 |
| Msa1390310 | Msa1466460 | 0.843058 | 1.769301e-58 | -8.615850e-47 |
| Msa1398860 | Msa1466460 | 0.815636 | 8.351647e-52 | -8.615850e-47 |
| Msa1402270 | Msa1466460 | 0.804634 | 1.966517e-49 | -8.615850e-47 |
| Msa1404540 | Msa1466460 | 0.812935 | 3.300466e-51 | -8.615850e-47 |
| Msa1408790 | Msa1466460 | 0.818981 | 1.476194e-52 | -8.615850e-47 |
| Msa1412140 | Msa1466460 | 0.804255 | 2.358106e-49 | -8.615850e-47 |
| Msa1429420 | Msa1466460 | 0.815920 | 7.220015e-52 | -8.615850e-47 |
| Msa1431060 | Msa1466460 | 0.808617 | 2.836156e-50 | -8.615850e-47 |
| Msa1436040 | Msa1466460 | 0.811428 | 7.036128e-51 | -8.615850e-47 |
| Msa1438640 | Msa1466460 | 0.806923 | 6.496187e-50 | -8.615850e-47 |
| Msa1440600 | Msa1466460 | 0.832265 | 1.043078e-55 | -8.615850e-47 |
| Msa1452120 | Msa1466460 | 0.804526 | 2.070335e-49 | -8.615850e-47 |
| Msa1459180 | Msa1466460 | 0.820662 | 6.093726e-53 | -8.615850e-47 |
| Msa1466460 | Msa1466590 | 0.809124 | 2.209596e-50 | -8.615850e-47 |
| Msa0620810 | Msa1466460 | 0.829984 | 3.789835e-55 | -8.615850e-47 |
| Msa0628500 | Msa1466460 | 0.800014 | 1.757889e-48 | -8.615850e-47 |
| Msa0639120 | Msa1466460 | 0.833513 | 5.107840e-56 | -8.615850e-47 |
| Msa0642720 | Msa1466460 | 0.824516 | 7.736717e-54 | -8.615850e-47 |
| Msa0663120 | Msa1466460 | 0.816900 | 4.357314e-52 | -8.615850e-47 |
| Msa0669850 | Msa1466460 | 0.814072 | 1.855776e-51 | -8.615850e-47 |
| Msa0691050 | Msa1466460 | 0.808181 | 3.514025e-50 | -8.615850e-47 |
| Msa0697400 | Msa1466460 | 0.811462 | 6.917328e-51 | -8.615850e-47 |
| Msa0697690 | Msa1466460 | 0.811942 | 5.438799e-51 | -8.615850e-47 |
| Msa0702350 | Msa1466460 | 0.808881 | 2.491108e-50 | -8.615850e-47 |
| Msa0702570 | Msa1466460 | 0.816369 | 5.730622e-52 | -8.615850e-47 |
| Msa0706370 | Msa1466460 | 0.808438 | 3.097812e-50 | -8.615850e-47 |
| Msa0711490 | Msa1466460 | 0.816043 | 6.775280e-52 | -8.615850e-47 |
| Msa0713460 | Msa1466460 | 0.811283 | 7.565117e-51 | -8.615850e-47 |
| Msa0715110 | Msa1466460 | 0.809338 | 1.988204e-50 | -8.615850e-47 |
| Msa0743800 | Msa1466460 | 0.802261 | 6.101551e-49 | -8.615850e-47 |
| Msa0753340 | Msa1466460 | 0.801385 | 9.229741e-49 | -8.615850e-47 |
| Msa0754720 | Msa1466460 | -0.808417 | 3.129905e-50 | -8.615850e-47 |
| Msa0757050 | Msa1466460 | 0.803490 | 3.400143e-49 | -8.615850e-47 |
| Msa0770350 | Msa1466460 | 0.813340 | 2.690029e-51 | -8.615850e-47 |
| Msa0793720 | Msa1466460 | 0.800293 | 1.542345e-48 | -8.615850e-47 |
| Msa0798070 | Msa1466460 | 0.829131 | 6.109614e-55 | -8.615850e-47 |
| Msa0829190 | Msa1466460 | 0.823221 | 1.556185e-53 | -8.615850e-47 |
| Msa0832570 | Msa1466460 | 0.819861 | 9.297628e-53 | -8.615850e-47 |
| Msa0124340 | Msa1466460 | 0.805650 | 1.205100e-49 | -8.615850e-47 |
| Msa0138970 | Msa1466460 | -0.800365 | 1.491680e-48 | -8.615850e-47 |
| Msa0143080 | Msa1466460 | 0.806532 | 7.858276e-50 | -8.615850e-47 |
| Msa0143380 | Msa1466460 | 0.817003 | 4.129916e-52 | -8.615850e-47 |
| Msa0149560 | Msa1466460 | 0.815952 | 7.100168e-52 | -8.615850e-47 |
| Msa0151690 | Msa1466460 | 0.817553 | 3.106008e-52 | -8.615850e-47 |
| Msa0165300 | Msa1466460 | 0.817003 | 4.130466e-52 | -8.615850e-47 |
| Msa0172350 | Msa1466460 | 0.838750 | 2.388328e-57 | -8.615850e-47 |
| Msa0185590 | Msa1466460 | 0.821636 | 3.634892e-53 | -8.615850e-47 |
| Msa0193650 | Msa1466460 | 0.802367 | 5.802354e-49 | -8.615850e-47 |
| Msa0205850 | Msa1466460 | 0.834056 | 3.737860e-56 | -8.615850e-47 |
| Msa0222920 | Msa1466460 | 0.807215 | 5.636555e-50 | -8.615850e-47 |
| Msa0227510 | Msa1466460 | 0.847610 | 1.037369e-59 | -8.615850e-47 |
| Msa0232320 | Msa1466460 | 0.807658 | 4.538479e-50 | -8.615850e-47 |
| Msa0236980 | Msa1466460 | 0.817878 | 2.624062e-52 | -8.615850e-47 |
| Msa1224830 | Msa1466460 | 0.825437 | 4.689539e-54 | -8.615850e-47 |
| Msa1228290 | Msa1466460 | 0.801653 | 8.135352e-49 | -8.615850e-47 |
| Msa1228890 | Msa1466460 | 0.839540 | 1.490966e-57 | -8.615850e-47 |
| Msa1237030 | Msa1466460 | 0.802958 | 4.382710e-49 | -8.615850e-47 |
| Msa1239080 | Msa1466460 | 0.815391 | 9.469444e-52 | -8.615850e-47 |
| Msa1243010 | Msa1466460 | 0.800876 | 1.173146e-48 | -8.615850e-47 |
| Msa1243040 | Msa1466460 | 0.820939 | 5.263173e-53 | -8.615850e-47 |
| Msa1249920 | Msa1466460 | 0.808887 | 2.483538e-50 | -8.615850e-47 |
| Msa1265070 | Msa1466460 | 0.816344 | 5.805566e-52 | -8.615850e-47 |
| Msa1267840 | Msa1466460 | 0.841482 | 4.627219e-58 | -8.615850e-47 |
| Msa1274280 | Msa1466460 | 0.807379 | 5.203182e-50 | -8.615850e-47 |
| Msa1280560 | Msa1466460 | 0.841503 | 4.569263e-58 | -8.615850e-47 |
| Msa1283990 | Msa1466460 | 0.819942 | 8.909090e-53 | -8.615850e-47 |
| Msa1295630 | Msa1466460 | 0.821733 | 3.450241e-53 | -8.615850e-47 |
| Msa1299360 | Msa1466460 | 0.861016 | 1.379707e-63 | -8.615850e-47 |
| Msa1300860 | Msa1466460 | 0.805988 | 1.023317e-49 | -8.615850e-47 |
| Msa1311960 | Msa1466460 | 0.800548 | 1.369019e-48 | -8.615850e-47 |
| Msa1318120 | Msa1466460 | 0.823417 | 1.400873e-53 | -8.615850e-47 |
| Msa1320740 | Msa1466460 | 0.802024 | 6.825582e-49 | -8.615850e-47 |
| Msa1327760 | Msa1466460 | 0.854785 | 9.763742e-62 | -8.615850e-47 |
| Msa1337730 | Msa1466460 | 0.829857 | 4.070136e-55 | -8.615850e-47 |
| Msa1338250 | Msa1466460 | 0.824559 | 7.560471e-54 | -8.615850e-47 |
| Msa1340020 | Msa1466460 | 0.803094 | 4.108060e-49 | -8.615850e-47 |
| Msa0369570 | Msa1466460 | 0.811673 | 6.225344e-51 | -8.615850e-47 |
| Msa0380920 | Msa1466460 | 0.801477 | 8.840358e-49 | -8.615850e-47 |
| Msa0393680 | Msa1466460 | 0.803346 | 3.643117e-49 | -8.615850e-47 |
| Msa0402330 | Msa1466460 | 0.806174 | 9.348337e-50 | -8.615850e-47 |
| Msa0413450 | Msa1466460 | 0.809028 | 2.316068e-50 | -8.615850e-47 |
| Msa0415810 | Msa1466460 | 0.817383 | 3.393732e-52 | -8.615850e-47 |
| Msa0426330 | Msa1466460 | 0.837266 | 5.751576e-57 | -8.615850e-47 |
| Msa0427220 | Msa1466460 | 0.822769 | 1.983842e-53 | -8.615850e-47 |
| Msa0430820 | Msa1466460 | 0.807393 | 5.168060e-50 | -8.615850e-47 |
| Msa0432070 | Msa1466460 | 0.802249 | 6.137153e-49 | -8.615850e-47 |
| Msa0432480 | Msa1466460 | 0.825301 | 5.050831e-54 | -8.615850e-47 |
| Msa0449820 | Msa1466460 | 0.819282 | 1.260529e-52 | -8.615850e-47 |
| Msa0449830 | Msa1466460 | 0.803896 | 2.800168e-49 | -8.615850e-47 |
| Msa0452960 | Msa1466460 | 0.811674 | 6.222582e-51 | -8.615850e-47 |
| Msa0469910 | Msa1466460 | -0.809726 | 1.641335e-50 | -8.615850e-47 |
| Msa0476880 | Msa1466460 | 0.804669 | 1.933666e-49 | -8.615850e-47 |
| Msa0986920 | Msa1466460 | 0.831151 | 1.963485e-55 | -8.615850e-47 |
| Msa0993530 | Msa1466460 | 0.871953 | 4.612378e-67 | -8.615850e-47 |
| Msa0996080 | Msa1466460 | 0.831062 | 2.065690e-55 | -8.615850e-47 |
| Msa1004420 | Msa1466460 | 0.813034 | 3.139569e-51 | -8.615850e-47 |
| Msa1009780 | Msa1466460 | 0.807418 | 5.103800e-50 | -8.615850e-47 |
| Msa1012430 | Msa1466460 | 0.801449 | 8.956837e-49 | -8.615850e-47 |
| Msa1020710 | Msa1466460 | 0.801098 | 1.056793e-48 | -8.615850e-47 |
| Msa1037920 | Msa1466460 | 0.820492 | 6.667682e-53 | -8.615850e-47 |
| Msa1087470 | Msa1466460 | 0.820745 | 5.831997e-53 | -8.615850e-47 |
| Msa1092820 | Msa1466460 | 0.802008 | 6.878750e-49 | -8.615850e-47 |
| Msa1097840 | Msa1466460 | 0.801851 | 7.406929e-49 | -8.615850e-47 |
| Msa0239510 | Msa1466460 | 0.809128 | 2.205155e-50 | -8.615850e-47 |
| Msa0243690 | Msa1466460 | 0.810820 | 9.532134e-51 | -8.615850e-47 |
| Msa0245940 | Msa1466460 | 0.805448 | 1.328468e-49 | -8.615850e-47 |
| Msa0248980 | Msa1466460 | 0.812934 | 3.302567e-51 | -8.615850e-47 |
| Msa0251250 | Msa1466460 | 0.805854 | 1.091916e-49 | -8.615850e-47 |
| Msa0259560 | Msa1466460 | 0.822866 | 1.883619e-53 | -8.615850e-47 |
| Msa0260810 | Msa1466460 | 0.805587 | 1.242382e-49 | -8.615850e-47 |
| Msa0264350 | Msa1466460 | 0.800709 | 1.269123e-48 | -8.615850e-47 |
| Msa0267760 | Msa1466460 | 0.827106 | 1.879291e-54 | -8.615850e-47 |
| Msa0276920 | Msa1466460 | 0.807986 | 3.865306e-50 | -8.615850e-47 |
| Msa0281360 | Msa1466460 | 0.850467 | 1.666598e-60 | -8.615850e-47 |
| Msa0287310 | Msa1466460 | 0.843904 | 1.051412e-58 | -8.615850e-47 |
| Msa0299890 | Msa1466460 | 0.830092 | 3.568543e-55 | -8.615850e-47 |
| Msa0315240 | Msa1466460 | 0.807442 | 5.044203e-50 | -8.615850e-47 |
| Msa0316850 | Msa1466460 | 0.826520 | 2.593607e-54 | -8.615850e-47 |
| Msa0318880 | Msa1466460 | 0.800491 | 1.406007e-48 | -8.615850e-47 |
| Msa0321170 | Msa1466460 | 0.803400 | 3.550408e-49 | -8.615850e-47 |
| Msa0321190 | Msa1466460 | 0.812334 | 4.467901e-51 | -8.615850e-47 |
| Msa0323180 | Msa1466460 | 0.810789 | 9.681077e-51 | -8.615850e-47 |
| Msa0325850 | Msa1466460 | 0.837857 | 4.056934e-57 | -8.615850e-47 |
| Msa0328210 | Msa1466460 | 0.803804 | 2.926224e-49 | -8.615850e-47 |
| Msa0333920 | Msa1466460 | 0.823605 | 1.265832e-53 | -8.615850e-47 |
| Msa0334040 | Msa1466460 | 0.833975 | 3.915905e-56 | -8.615850e-47 |
| Msa0335040 | Msa1466460 | 0.830043 | 3.667587e-55 | -8.615850e-47 |
| Msa0342100 | Msa1466460 | 0.824396 | 8.257747e-54 | -8.615850e-47 |
| Msa0355270 | Msa1466460 | 0.808921 | 2.442075e-50 | -8.615850e-47 |
| Msa1113590 | Msa1466460 | 0.814467 | 1.517888e-51 | -8.615850e-47 |
| Msa1124310 | Msa1466460 | 0.806251 | 9.005642e-50 | -8.615850e-47 |
| Msa1129980 | Msa1466460 | 0.800488 | 1.408071e-48 | -8.615850e-47 |
| Msa1130210 | Msa1466460 | -0.800180 | 1.626099e-48 | -8.615850e-47 |
| Msa1136230 | Msa1466460 | 0.806094 | 9.721424e-50 | -8.615850e-47 |
| Msa1170280 | Msa1466460 | 0.814648 | 1.384146e-51 | -8.615850e-47 |
| Msa1174100 | Msa1466460 | 0.804037 | 2.618391e-49 | -8.615850e-47 |
| Msa1179940 | Msa1466460 | 0.813129 | 2.992207e-51 | -8.615850e-47 |
| Msa1179970 | Msa1466460 | 0.817977 | 2.492701e-52 | -8.615850e-47 |
| Msa1185540 | Msa1466460 | 0.858158 | 9.980410e-63 | -8.615850e-47 |
| Msa1188910 | Msa1466460 | 0.804080 | 2.564896e-49 | -8.615850e-47 |
| Msa1199290 | Msa1466460 | 0.800131 | 1.664334e-48 | -8.615850e-47 |
| Msa1210400 | Msa1466460 | 0.805687 | 1.183722e-49 | -8.615850e-47 |
| Msa1221900 | Msa1466460 | 0.816007 | 6.903874e-52 | -8.615850e-47 |
| Msa0484780 | Msa1466460 | 0.815734 | 7.942943e-52 | -8.615850e-47 |
| Msa0489030 | Msa1466460 | 0.807236 | 5.578942e-50 | -8.615850e-47 |
| Msa0497420 | Msa1466460 | 0.809215 | 2.112267e-50 | -8.615850e-47 |
| Msa0506890 | Msa1466460 | 0.820708 | 5.947937e-53 | -8.615850e-47 |
| Msa0506940 | Msa1466460 | 0.802249 | 6.136089e-49 | -8.615850e-47 |
| Msa0526710 | Msa1466460 | 0.824242 | 8.976570e-54 | -8.615850e-47 |
| Msa0526890 | Msa1466460 | 0.803579 | 3.258954e-49 | -8.615850e-47 |
| Msa0527590 | Msa1466460 | 0.803709 | 3.063237e-49 | -8.615850e-47 |
| Msa0535030 | Msa1466460 | 0.812099 | 5.025846e-51 | -8.615850e-47 |
| Msa0535060 | Msa1466460 | 0.812831 | 3.478023e-51 | -8.615850e-47 |
| Msa0546300 | Msa1466460 | 0.823429 | 1.392055e-53 | -8.615850e-47 |
| Msa0560470 | Msa1466460 | 0.828919 | 6.878242e-55 | -8.615850e-47 |
| Msa0570640 | Msa1466460 | 0.814321 | 1.635453e-51 | -8.615850e-47 |
| Msa0574890 | Msa1466460 | 0.801309 | 9.566910e-49 | -8.615850e-47 |
| Msa0579720 | Msa1466460 | 0.802909 | 4.485659e-49 | -8.615850e-47 |
| Msa0585900 | Msa1466460 | 0.807008 | 6.234448e-50 | -8.615850e-47 |
| Msa0585920 | Msa1466460 | 0.803106 | 4.083914e-49 | -8.615850e-47 |
| Msa0587940 | Msa1466460 | 0.802572 | 5.265511e-49 | -8.615850e-47 |
| Msa0591770 | Msa1466460 | 0.801363 | 9.327448e-49 | -8.615850e-47 |
| Msa0863370 | Msa1466460 | 0.806988 | 6.296030e-50 | -8.615850e-47 |
| Msa0863800 | Msa1466460 | 0.819181 | 1.328924e-52 | -8.615850e-47 |
| Msa0881020 | Msa1466460 | 0.817973 | 2.497612e-52 | -8.615850e-47 |
| Msa0881030 | Msa1466460 | 0.824483 | 7.878982e-54 | -8.615850e-47 |
| Msa0882510 | Msa1466460 | 0.808535 | 2.953290e-50 | -8.615850e-47 |
| Msa0893810 | Msa1466460 | 0.860184 | 2.465632e-63 | -8.615850e-47 |
| Msa0896220 | Msa1466460 | 0.817150 | 3.828852e-52 | -8.615850e-47 |
| Msa0899230 | Msa1466460 | 0.811418 | 7.072323e-51 | -8.615850e-47 |
| Msa0908050 | Msa1466460 | 0.812359 | 4.411162e-51 | -8.615850e-47 |
| Msa0908170 | Msa1466460 | 0.851399 | 9.100758e-61 | -8.615850e-47 |
| Msa0920550 | Msa1466460 | 0.819216 | 1.304630e-52 | -8.615850e-47 |
| Msa0922540 | Msa1466460 | 0.803549 | 3.306397e-49 | -8.615850e-47 |
| Msa0930780 | Msa1466460 | 0.824392 | 8.276212e-54 | -8.615850e-47 |
| Msa0933230 | Msa1466460 | 0.801534 | 8.606747e-49 | -8.615850e-47 |
| Msa0933440 | Msa1466460 | 0.820759 | 5.787899e-53 | -8.615850e-47 |
| Msa0937670 | Msa1466460 | 0.804711 | 1.894939e-49 | -8.615850e-47 |
| Msa0942730 | Msa1466460 | 0.800967 | 1.123940e-48 | -8.615850e-47 |
| Msa0959010 | Msa1466460 | 0.855647 | 5.481285e-62 | -8.615850e-47 |
| Msa0960160 | Msa1466460 | 0.801344 | 9.412759e-49 | -8.615850e-47 |
| Msa0966420 | Msa1466460 | 0.801033 | 1.089719e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466460 | MtrunA17_Chr7g0252401 | 100.000 | 182 | 0 | 0 | 1 | 182 | 132 | 313 | 3.83e-130 | 373 |
| Msa1466460 | MtrunA17_Chr8g0385571 | 71.978 | 182 | 49 | 1 | 1 | 182 | 152 | 331 | 1.80e-91 | 275 |
| Msa1466460 | MtrunA17_Chr3g0131501 | 65.934 | 182 | 60 | 1 | 1 | 182 | 130 | 309 | 1.11e-83 | 254 |
| Msa1466460 | MtrunA17_Chr5g0396801 | 40.650 | 123 | 62 | 3 | 71 | 182 | 29 | 151 | 1.33e-20 | 87.0 |
| Msa1466460 | MtrunA17_Chr8g0347451 | 39.655 | 116 | 63 | 2 | 74 | 182 | 49 | 164 | 2.59e-20 | 86.7 |
| Msa1466460 | MtrunA17_Chr6g0488081 | 37.273 | 110 | 63 | 2 | 76 | 182 | 19 | 125 | 1.83e-14 | 69.7 |
| Msa1466460 | MtrunA17_Chr8g0382201 | 36.082 | 97 | 62 | 0 | 70 | 166 | 189 | 285 | 2.89e-14 | 69.7 |
| Msa1466460 | MtrunA17_Chr3g0135861 | 39.286 | 84 | 48 | 1 | 76 | 156 | 35 | 118 | 3.28e-14 | 69.3 |
| Msa1466460 | MtrunA17_Chr1g0149111 | 38.889 | 108 | 64 | 1 | 72 | 179 | 135 | 240 | 4.18e-14 | 69.3 |
| Msa1466460 | MtrunA17_Chr7g0240341 | 32.500 | 120 | 68 | 2 | 76 | 182 | 25 | 144 | 8.06e-13 | 65.5 |
| Msa1466460 | MtrunA17_Chr3g0137941 | 35.849 | 106 | 66 | 2 | 74 | 179 | 120 | 223 | 8.70e-13 | 65.5 |
| Msa1466460 | MtrunA17_Chr3g0115801 | 33.696 | 92 | 61 | 0 | 74 | 165 | 114 | 205 | 2.65e-12 | 63.9 |
| Msa1466460 | MtrunA17_Chr5g0436041 | 33.051 | 118 | 68 | 3 | 76 | 182 | 34 | 151 | 5.15e-12 | 63.2 |
| Msa1466460 | MtrunA17_Chr2g0296061 | 31.148 | 122 | 67 | 1 | 78 | 182 | 17 | 138 | 5.89e-12 | 62.8 |
| Msa1466460 | MtrunA17_Chr4g0067231 | 32.258 | 124 | 65 | 2 | 78 | 182 | 16 | 139 | 1.23e-11 | 62.0 |
| Msa1466460 | MtrunA17_Chr4g0063561 | 34.862 | 109 | 68 | 2 | 72 | 179 | 119 | 225 | 1.99e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466460 | AT5G51050.1 | 69.780 | 182 | 54 | 1 | 1 | 182 | 148 | 328 | 5.16e-88 | 266 |
| Msa1466460 | AT5G61810.1 | 67.033 | 182 | 55 | 1 | 1 | 182 | 133 | 309 | 8.68e-83 | 253 |
| Msa1466460 | AT5G07320.1 | 69.231 | 182 | 51 | 2 | 1 | 182 | 134 | 310 | 3.84e-80 | 246 |
| Msa1466460 | AT5G61810.2 | 66.082 | 171 | 53 | 1 | 12 | 182 | 1 | 166 | 1.48e-77 | 235 |
| Msa1466460 | AT4G01100.1 | 39.655 | 116 | 63 | 2 | 74 | 182 | 40 | 155 | 6.63e-21 | 88.6 |
| Msa1466460 | AT4G01100.2 | 35.385 | 130 | 63 | 2 | 74 | 182 | 40 | 169 | 6.96e-19 | 83.2 |
| Msa1466460 | AT4G01100.3 | 37.500 | 104 | 58 | 2 | 86 | 182 | 2 | 105 | 8.88e-17 | 76.6 |
| Msa1466460 | AT3G55640.2 | 35.714 | 126 | 70 | 3 | 68 | 182 | 30 | 155 | 6.40e-14 | 68.2 |
| Msa1466460 | AT3G55640.3 | 35.714 | 126 | 70 | 3 | 68 | 182 | 30 | 155 | 6.40e-14 | 68.2 |
| Msa1466460 | AT3G55640.1 | 35.714 | 126 | 70 | 3 | 68 | 182 | 30 | 155 | 1.49e-13 | 67.8 |
| Msa1466460 | AT3G55640.4 | 35.714 | 126 | 70 | 3 | 68 | 182 | 30 | 155 | 1.49e-13 | 67.8 |
| Msa1466460 | AT4G26180.2 | 34.545 | 110 | 66 | 2 | 76 | 182 | 21 | 127 | 2.82e-13 | 66.6 |
| Msa1466460 | AT4G26180.1 | 34.545 | 110 | 66 | 2 | 76 | 182 | 21 | 127 | 3.62e-13 | 66.6 |
| Msa1466460 | AT4G32400.1 | 36.111 | 108 | 67 | 1 | 72 | 179 | 110 | 215 | 6.84e-13 | 66.2 |
| Msa1466460 | AT3G53940.2 | 35.833 | 120 | 62 | 3 | 76 | 182 | 73 | 190 | 7.14e-13 | 65.5 |
| Msa1466460 | AT3G53940.1 | 35.833 | 120 | 62 | 3 | 76 | 182 | 73 | 190 | 1.20e-12 | 65.5 |
| Msa1466460 | AT3G21390.2 | 33.333 | 120 | 65 | 2 | 78 | 182 | 43 | 162 | 2.60e-12 | 64.3 |
| Msa1466460 | AT3G21390.1 | 33.333 | 120 | 65 | 2 | 78 | 182 | 21 | 140 | 3.44e-12 | 63.9 |
| Msa1466460 | AT1G78180.1 | 32.990 | 97 | 65 | 0 | 70 | 166 | 122 | 218 | 6.47e-12 | 63.5 |
| Msa1466460 | AT5G64970.3 | 29.897 | 97 | 68 | 0 | 70 | 166 | 129 | 225 | 1.30e-11 | 62.4 |
| Msa1466460 | AT5G64970.1 | 29.897 | 97 | 68 | 0 | 70 | 166 | 129 | 225 | 1.55e-11 | 62.4 |
Find 53 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAACATTTACCATTATT+TGG | 0.152309 | tig0047191:+574 | Msa1466460:CDS |
| CTGCTGGCTGGTGGTATAGC+TGG | 0.297668 | tig0047191:+965 | Msa1466460:CDS |
| GGAGAGGAAAAGGCTGATAT+TGG | 0.305280 | tig0047191:+929 | Msa1466460:CDS |
| TTATGCGAGCACTTGTTGTT+TGG | 0.340534 | tig0047191:-773 | Msa1466460:intergenic |
| TGCATATCCGCTCCAAATAA+TGG | 0.343042 | tig0047191:-602 | Msa1466460:intergenic |
| CGGATATGCATGGTCGATAT+CGG | 0.355218 | tig0047191:+599 | Msa1466460:CDS |
| TGGAAAGAAGGTGGTTTAGT+AGG | 0.387807 | tig0047191:+800 | Msa1466460:CDS |
| TTTCGTCGAGCGTGTTGATA+AGG | 0.392137 | tig0047191:+481 | Msa1466460:CDS |
| GGATATGCATGGTCGATATC+GGG | 0.394180 | tig0047191:+600 | Msa1466460:CDS |
| CAATGGCTTAAATGTTCTTA+AGG | 0.402824 | tig0047191:+835 | Msa1466460:CDS |
| TAAAATCTAATGGCACTCTC+AGG | 0.406499 | tig0047191:-879 | Msa1466460:intergenic |
| CTCATAGGTATAAAATCTAA+TGG | 0.412822 | tig0047191:-889 | Msa1466460:intergenic |
| GCATATAGGTATCTTATTGC+AGG | 0.428990 | tig0047191:+665 | Msa1466460:CDS |
| GAAGGTCTTCATCATCTCAT+AGG | 0.451692 | tig0047191:-904 | Msa1466460:intergenic |
| TAATGGTGTTATAACATTTG+AGG | 0.460039 | tig0047191:+508 | Msa1466460:CDS |
| CTTATTGCAGGAGGAGTGGC+AGG | 0.466803 | tig0047191:+677 | Msa1466460:CDS |
| AAAGGCTGATATTGGAGGTA+TGG | 0.476181 | tig0047191:+937 | Msa1466460:CDS |
| TGCACCTCTCGACCGTCTAA+AGG | 0.491875 | tig0047191:+721 | Msa1466460:CDS |
| TGCTAAAGGAGGAGAGGAAA+AGG | 0.498282 | tig0047191:+919 | Msa1466460:CDS |
| AAGGCTGATATTGGAGGTAT+GGG | 0.501323 | tig0047191:+938 | Msa1466460:CDS |
| GAGGAAAAGGCTGATATTGG+AGG | 0.503465 | tig0047191:+932 | Msa1466460:CDS |
| GTGTTATAACATTTGAGGAA+TGG | 0.514699 | tig0047191:+513 | Msa1466460:CDS |
| AGGGATTAAAATTGATGATG+AGG | 0.515030 | tig0047191:+448 | None:intergenic |
| ACCTTCATTGTGGATGCTAA+AGG | 0.516847 | tig0047191:+905 | Msa1466460:CDS |
| TCCTTTAGCATCCACAATGA+AGG | 0.516899 | tig0047191:-922 | Msa1466460:intergenic |
| TTATAACATTTGAGGAATGG+AGG | 0.534313 | tig0047191:+516 | Msa1466460:CDS |
| AAAATCTAATGGCACTCTCA+GGG | 0.534392 | tig0047191:-878 | Msa1466460:intergenic |
| ATGGGGCGGCTGCTGGCTGG+TGG | 0.539699 | tig0047191:+956 | Msa1466460:CDS |
| CGTGTTGATAAGGATCATAA+TGG | 0.546342 | tig0047191:+491 | Msa1466460:CDS |
| ACTGTTATTCCCGCAGGTGT+TGG | 0.556455 | tig0047191:+629 | Msa1466460:CDS |
| ACATGCTTACCAACACCTGC+GGG | 0.566513 | tig0047191:-654 | Msa1466460:intergenic |
| TATAACATTTGAGGAATGGA+GGG | 0.568763 | tig0047191:+517 | Msa1466460:CDS |
| AAAACTCTTTGGAAAGAAGG+TGG | 0.573548 | tig0047191:+791 | Msa1466460:CDS |
| TCTGCTGCTTTATCCTCATG+AGG | 0.578499 | tig0047191:+544 | Msa1466460:CDS |
| GTAAGCATGTTCATGCATAT+AGG | 0.586205 | tig0047191:+651 | Msa1466460:CDS |
| GATATGCATGGTCGATATCG+GGG | 0.597937 | tig0047191:+601 | Msa1466460:CDS |
| TTATTTGGAGCGGATATGCA+TGG | 0.601766 | tig0047191:+589 | Msa1466460:CDS |
| TTCTCAATAGTTGCCTCATG+AGG | 0.605430 | tig0047191:-573 | Msa1466460:intergenic |
| GAGTGGCAGGTGCTGCATCA+CGG | 0.607001 | tig0047191:+690 | Msa1466460:CDS |
| GTATCTTATTGCAGGAGGAG+TGG | 0.608780 | tig0047191:+673 | Msa1466460:CDS |
| TGGCTTAAATGTTCTTAAGG+TGG | 0.612520 | tig0047191:+838 | Msa1466460:CDS |
| GAACATACTGTTATTCCCGC+AGG | 0.623642 | tig0047191:+623 | Msa1466460:CDS |
| CTTGCAATACAACCTTTAGA+CGG | 0.625650 | tig0047191:-749 | Msa1466460:intergenic |
| ACATTTACCATTATTTGGAG+CGG | 0.628260 | tig0047191:+579 | Msa1466460:CDS |
| AACATGCTTACCAACACCTG+CGG | 0.635492 | tig0047191:-655 | Msa1466460:intergenic |
| TGTGGATGCTAAAGGAGGAG+AGG | 0.642716 | tig0047191:+913 | Msa1466460:CDS |
| TTCATTGTGGATGCTAAAGG+AGG | 0.644411 | tig0047191:+908 | Msa1466460:CDS |
| TATAGGTATCTTATTGCAGG+AGG | 0.651279 | tig0047191:+668 | Msa1466460:CDS |
| GATGATGAAGACCTTCATTG+TGG | 0.683051 | tig0047191:+895 | Msa1466460:CDS |
| ACAACCTTTAGACGGTCGAG+AGG | 0.683942 | tig0047191:-741 | Msa1466460:intergenic |
| CTGATATTGGAGGTATGGGG+CGG | 0.684136 | tig0047191:+942 | Msa1466460:CDS |
| AAATCTAATGGCACTCTCAG+GGG | 0.691447 | tig0047191:-877 | Msa1466460:intergenic |
| AGGCTGATATTGGAGGTATG+GGG | 0.704416 | tig0047191:+939 | Msa1466460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATGGTGTTATAACATTTG+AGG | + | tig0047191:508-527 | Msa1466460:CDS | 25.0% |
| ! | TGAGAACATTTACCATTATT+TGG | + | tig0047191:574-593 | Msa1466460:CDS | 25.0% |
| ! | CTCATAGGTATAAAATCTAA+TGG | - | tig0047191:876-895 | Msa1466460:intergenic | 25.0% |
| GTGTTATAACATTTGAGGAA+TGG | + | tig0047191:513-532 | Msa1466460:CDS | 30.0% | |
| TTATAACATTTGAGGAATGG+AGG | + | tig0047191:516-535 | Msa1466460:CDS | 30.0% | |
| TATAACATTTGAGGAATGGA+GGG | + | tig0047191:517-536 | Msa1466460:CDS | 30.0% | |
| ACATTTACCATTATTTGGAG+CGG | + | tig0047191:579-598 | Msa1466460:CDS | 30.0% | |
| ! | GTAAAAACTCTTTGGAAAGA+AGG | + | tig0047191:788-807 | Msa1466460:CDS | 30.0% |
| CAATGGCTTAAATGTTCTTA+AGG | + | tig0047191:835-854 | Msa1466460:CDS | 30.0% | |
| ! | CGTGTTGATAAGGATCATAA+TGG | + | tig0047191:491-510 | Msa1466460:CDS | 35.0% |
| GTAAGCATGTTCATGCATAT+AGG | + | tig0047191:651-670 | Msa1466460:CDS | 35.0% | |
| GCATATAGGTATCTTATTGC+AGG | + | tig0047191:665-684 | Msa1466460:CDS | 35.0% | |
| TATAGGTATCTTATTGCAGG+AGG | + | tig0047191:668-687 | Msa1466460:CDS | 35.0% | |
| CTTGCAATACAACCTTTAGA+CGG | - | tig0047191:736-755 | Msa1466460:intergenic | 35.0% | |
| ! | TTCCAAAGAGTTTTTACTGC+AGG | - | tig0047191:785-804 | Msa1466460:intergenic | 35.0% |
| ! | AAAACTCTTTGGAAAGAAGG+TGG | + | tig0047191:791-810 | Msa1466460:CDS | 35.0% |
| !!! | GGTTTAGTAGGATTTTTTCG+AGG | + | tig0047191:812-831 | Msa1466460:CDS | 35.0% |
| TGGCTTAAATGTTCTTAAGG+TGG | + | tig0047191:838-857 | Msa1466460:CDS | 35.0% | |
| AAAATCTAATGGCACTCTCA+GGG | - | tig0047191:865-884 | Msa1466460:intergenic | 35.0% | |
| TAAAATCTAATGGCACTCTC+AGG | - | tig0047191:866-885 | Msa1466460:intergenic | 35.0% | |
| TTCTCAATAGTTGCCTCATG+AGG | - | tig0047191:560-579 | Msa1466460:intergenic | 40.0% | |
| TGCATATCCGCTCCAAATAA+TGG | - | tig0047191:589-608 | Msa1466460:intergenic | 40.0% | |
| ! | TTATTTGGAGCGGATATGCA+TGG | + | tig0047191:589-608 | Msa1466460:CDS | 40.0% |
| !! | TTATGCGAGCACTTGTTGTT+TGG | - | tig0047191:760-779 | Msa1466460:intergenic | 40.0% |
| TGCCTGCAGTAAAAACTCTT+TGG | + | tig0047191:780-799 | Msa1466460:CDS | 40.0% | |
| TGGAAAGAAGGTGGTTTAGT+AGG | + | tig0047191:800-819 | Msa1466460:CDS | 40.0% | |
| !!! | GTAGGATTTTTTCGAGGCAA+TGG | + | tig0047191:818-837 | Msa1466460:CDS | 40.0% |
| AAATCTAATGGCACTCTCAG+GGG | - | tig0047191:864-883 | Msa1466460:intergenic | 40.0% | |
| GAAGGTCTTCATCATCTCAT+AGG | - | tig0047191:891-910 | Msa1466460:intergenic | 40.0% | |
| GATGATGAAGACCTTCATTG+TGG | + | tig0047191:895-914 | Msa1466460:CDS | 40.0% | |
| ACCTTCATTGTGGATGCTAA+AGG | + | tig0047191:905-924 | Msa1466460:CDS | 40.0% | |
| TCCTTTAGCATCCACAATGA+AGG | - | tig0047191:909-928 | Msa1466460:intergenic | 40.0% | |
| TTCATTGTGGATGCTAAAGG+AGG | + | tig0047191:908-927 | Msa1466460:CDS | 40.0% | |
| AAAGGCTGATATTGGAGGTA+TGG | + | tig0047191:937-956 | Msa1466460:CDS | 40.0% | |
| ! | AAGGCTGATATTGGAGGTAT+GGG | + | tig0047191:938-957 | Msa1466460:CDS | 40.0% |
| ! | TTTCGTCGAGCGTGTTGATA+AGG | + | tig0047191:481-500 | Msa1466460:CDS | 45.0% |
| !! | TCTGCTGCTTTATCCTCATG+AGG | + | tig0047191:544-563 | Msa1466460:CDS | 45.0% |
| CGGATATGCATGGTCGATAT+CGG | + | tig0047191:599-618 | Msa1466460:CDS | 45.0% | |
| GGATATGCATGGTCGATATC+GGG | + | tig0047191:600-619 | Msa1466460:CDS | 45.0% | |
| GATATGCATGGTCGATATCG+GGG | + | tig0047191:601-620 | Msa1466460:CDS | 45.0% | |
| GAACATACTGTTATTCCCGC+AGG | + | tig0047191:623-642 | Msa1466460:CDS | 45.0% | |
| AACATGCTTACCAACACCTG+CGG | - | tig0047191:642-661 | Msa1466460:intergenic | 45.0% | |
| GTATCTTATTGCAGGAGGAG+TGG | + | tig0047191:673-692 | Msa1466460:CDS | 45.0% | |
| TGCTAAAGGAGGAGAGGAAA+AGG | + | tig0047191:919-938 | Msa1466460:CDS | 45.0% | |
| GGAGAGGAAAAGGCTGATAT+TGG | + | tig0047191:929-948 | Msa1466460:CDS | 45.0% | |
| GAGGAAAAGGCTGATATTGG+AGG | + | tig0047191:932-951 | Msa1466460:CDS | 45.0% | |
| ! | AGGCTGATATTGGAGGTATG+GGG | + | tig0047191:939-958 | Msa1466460:CDS | 45.0% |
| ACTGTTATTCCCGCAGGTGT+TGG | + | tig0047191:629-648 | Msa1466460:CDS | 50.0% | |
| ACATGCTTACCAACACCTGC+GGG | - | tig0047191:641-660 | Msa1466460:intergenic | 50.0% | |
| ACAACCTTTAGACGGTCGAG+AGG | - | tig0047191:728-747 | Msa1466460:intergenic | 50.0% | |
| TGTGGATGCTAAAGGAGGAG+AGG | + | tig0047191:913-932 | Msa1466460:CDS | 50.0% | |
| ! | CTGATATTGGAGGTATGGGG+CGG | + | tig0047191:942-961 | Msa1466460:CDS | 50.0% |
| CTTATTGCAGGAGGAGTGGC+AGG | + | tig0047191:677-696 | Msa1466460:CDS | 55.0% | |
| TGCACCTCTCGACCGTCTAA+AGG | + | tig0047191:721-740 | Msa1466460:CDS | 55.0% | |
| ! | GAGTGGCAGGTGCTGCATCA+CGG | + | tig0047191:690-709 | Msa1466460:CDS | 60.0% |
| ! | CTGCTGGCTGGTGGTATAGC+TGG | + | tig0047191:965-984 | Msa1466460:CDS | 60.0% |
| ! | TGGAGGTATGGGGCGGCTGC+TGG | + | tig0047191:949-968 | Msa1466460:CDS | 70.0% |
| GGTATGGGGCGGCTGCTGGC+TGG | + | tig0047191:953-972 | Msa1466460:CDS | 75.0% | |
| ! | ATGGGGCGGCTGCTGGCTGG+TGG | + | tig0047191:956-975 | Msa1466460:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0047191 | gene | 452 | 997 | 452 | ID=Msa1466460;Name=Msa1466460 |
| tig0047191 | mRNA | 452 | 997 | 452 | ID=Msa1466460-mRNA-1;Parent=Msa1466460;Name=Msa1466460-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|182 |
| tig0047191 | exon | 452 | 997 | 452 | ID=Msa1466460-mRNA-1:exon:25076;Parent=Msa1466460-mRNA-1 |
| tig0047191 | CDS | 452 | 997 | 452 | ID=Msa1466460-mRNA-1:cds;Parent=Msa1466460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
