Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753340 | XP_003611115.1 | 96.053 | 1064 | 40 | 1 | 1 | 1064 | 1 | 1062 | 0.0 | 2060 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753340 | G7KDD8 | 96.053 | 1064 | 40 | 1 | 1 | 1064 | 1 | 1062 | 0.0 | 2060 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102750 | Msa0753340 | 0.814368 | 1.596712e-51 | -8.615850e-47 |
| Msa0105420 | Msa0753340 | 0.836972 | 6.839648e-57 | -8.615850e-47 |
| Msa0606360 | Msa0753340 | 0.801741 | 7.804405e-49 | -8.615850e-47 |
| Msa0628890 | Msa0753340 | 0.805830 | 1.104451e-49 | -8.615850e-47 |
| Msa0753340 | Msa0757950 | 0.827010 | 1.981154e-54 | -8.615850e-47 |
| Msa0753340 | Msa0795390 | 0.839843 | 1.242989e-57 | -8.615850e-47 |
| Msa0753340 | Msa0810480 | 0.838106 | 3.502580e-57 | -8.615850e-47 |
| Msa0753340 | Msa0832570 | 0.915288 | 7.030360e-85 | -8.615850e-47 |
| Msa0753340 | Msa0881020 | 0.813414 | 2.590520e-51 | -8.615850e-47 |
| Msa0753340 | Msa0893810 | 0.810326 | 1.218796e-50 | -8.615850e-47 |
| Msa0753340 | Msa0930780 | 0.801719 | 7.886228e-49 | -8.615850e-47 |
| Msa0753340 | Msa0993530 | 0.814960 | 1.180591e-51 | -8.615850e-47 |
| Msa0753340 | Msa1185540 | 0.817676 | 2.914453e-52 | -8.615850e-47 |
| Msa0753340 | Msa1269080 | 0.832868 | 7.392595e-56 | -8.615850e-47 |
| Msa0753340 | Msa1278840 | 0.830398 | 3.004408e-55 | -8.615850e-47 |
| Msa0753340 | Msa1318240 | 0.828460 | 8.879546e-55 | -8.615850e-47 |
| Msa0753340 | Msa1358040 | 0.920003 | 2.216716e-87 | -8.615850e-47 |
| Msa0753340 | Msa1404540 | 0.800560 | 1.360835e-48 | -8.615850e-47 |
| Msa0753340 | Msa1423880 | 0.802090 | 6.615576e-49 | -8.615850e-47 |
| Msa0753340 | Msa1459180 | 0.813987 | 1.938093e-51 | -8.615850e-47 |
| Msa0753340 | Msa1466460 | 0.801385 | 9.229741e-49 | -8.615850e-47 |
| Msa0193650 | Msa0753340 | 0.808322 | 3.279267e-50 | -8.615850e-47 |
| Msa0474110 | Msa0753340 | 0.800533 | 1.378268e-48 | -8.615850e-47 |
| Msa0260820 | Msa0753340 | -0.803712 | 3.058213e-49 | -8.615850e-47 |
| Msa0299890 | Msa0753340 | 0.807199 | 5.678840e-50 | -8.615850e-47 |
| Msa0313990 | Msa0753340 | 0.809688 | 1.671942e-50 | -8.615850e-47 |
| Msa0335040 | Msa0753340 | 0.823019 | 1.735171e-53 | -8.615850e-47 |
| Msa0554710 | Msa0753340 | 0.804059 | 2.590922e-49 | -8.615850e-47 |
| Msa0574890 | Msa0753340 | 0.803403 | 3.544031e-49 | -8.615850e-47 |
| Msa0587940 | Msa0753340 | 0.805854 | 1.091772e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753340 | MtrunA17_Chr5g0397721 | 96.053 | 1064 | 40 | 1 | 1 | 1064 | 1 | 1062 | 0.0 | 2060 |
| Msa0753340 | MtrunA17_Chr8g0386571 | 63.401 | 1082 | 331 | 11 | 1 | 1064 | 1 | 1035 | 0.0 | 1271 |
| Msa0753340 | MtrunA17_Chr1g0203361 | 37.018 | 778 | 419 | 16 | 1 | 771 | 1 | 714 | 1.09e-135 | 431 |
| Msa0753340 | MtrunA17_Chr1g0203361 | 70.909 | 55 | 16 | 0 | 1009 | 1063 | 798 | 852 | 8.59e-15 | 79.3 |
| Msa0753340 | MtrunA17_Chr3g0115391 | 25.860 | 727 | 435 | 19 | 1 | 672 | 1 | 678 | 3.83e-48 | 188 |
| Msa0753340 | MtrunA17_Chr1g0179821 | 25.786 | 477 | 274 | 14 | 1 | 437 | 1 | 437 | 9.26e-26 | 115 |
| Msa0753340 | MtrunA17_Chr1g0179821 | 25.323 | 541 | 319 | 17 | 568 | 1060 | 776 | 1279 | 7.55e-11 | 66.6 |
| Msa0753340 | MtrunA17_Chr1g0197491 | 22.629 | 464 | 310 | 14 | 1 | 434 | 25 | 469 | 9.36e-16 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753340 | AT1G63300.1 | 47.530 | 1073 | 510 | 15 | 1 | 1064 | 1 | 1029 | 0.0 | 842 |
| Msa0753340 | AT5G41140.1 | 44.940 | 1077 | 484 | 19 | 1 | 1063 | 1 | 982 | 0.0 | 780 |
| Msa0753340 | AT5G41140.2 | 44.744 | 1075 | 482 | 18 | 1 | 1063 | 1 | 975 | 0.0 | 777 |
| Msa0753340 | AT5G52280.1 | 36.517 | 890 | 449 | 19 | 1 | 888 | 1 | 776 | 2.63e-137 | 435 |
| Msa0753340 | AT5G52280.1 | 63.492 | 63 | 23 | 0 | 1001 | 1063 | 790 | 852 | 3.44e-14 | 77.8 |
| Msa0753340 | AT1G22060.2 | 25.926 | 729 | 420 | 23 | 1 | 673 | 1 | 665 | 6.24e-43 | 171 |
| Msa0753340 | AT1G22060.1 | 25.926 | 729 | 420 | 23 | 1 | 673 | 1 | 665 | 6.24e-43 | 171 |
Find 213 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTCCTTTGACTTTATC+AGG | 0.217694 | 5_2:+6999590 | None:intergenic |
| ATCTTATGTTTCAGATATTA+AGG | 0.227236 | 5_2:+7003869 | None:intergenic |
| CTGTATCGCCGTTGCTGAAT+TGG | 0.249416 | 5_2:+7002294 | None:intergenic |
| TACATTGAATTGTTGATAAC+TGG | 0.250301 | 5_2:-7003731 | Msa0753340:five_prime_UTR |
| CCTCCTCTAATCTTCTGATA+TGG | 0.253588 | 5_2:+7000797 | None:intergenic |
| AATATGTTATTCTTCCTTCT+TGG | 0.272326 | 5_2:-6998887 | Msa0753340:three_prime_UTR |
| CTCAGAGCTCGGGTTAAGTA+TGG | 0.286991 | 5_2:-7001754 | Msa0753340:CDS |
| TCTGCTCCAACATCTCTTCC+AGG | 0.286998 | 5_2:+7001292 | None:intergenic |
| CCAGCATTGAGAAGAGATTC+AGG | 0.288948 | 5_2:-6999901 | Msa0753340:CDS |
| ATGGGTTTCTAGTACCTTAA+TGG | 0.298162 | 5_2:+7000816 | None:intergenic |
| CTCAAACAAGTGTGTCTCTT+TGG | 0.299665 | 5_2:+7001119 | None:intergenic |
| TCTTTATTTCACTCTTTAGC+TGG | 0.301119 | 5_2:+6999942 | None:intergenic |
| TAGTTGGTGGAGTAGTTGTT+TGG | 0.303733 | 5_2:-7003688 | Msa0753340:five_prime_UTR |
| GTTGATACTCCCTGCGAAAT+TGG | 0.316541 | 5_2:-7001921 | Msa0753340:CDS |
| TCCGCGGCACGGGCCATAAC+TGG | 0.317067 | 5_2:+7001855 | None:intergenic |
| TAGTTGACTGAAGCTCTTCT+TGG | 0.317857 | 5_2:+7000494 | None:intergenic |
| CCTTTACAATTTGTTTCCTA+AGG | 0.319699 | 5_2:+7001592 | None:intergenic |
| AGTTGGTGGAGTAGTTGTTT+GGG | 0.320329 | 5_2:-7003687 | Msa0753340:five_prime_UTR |
| CGTTCTGTTGTTTATTGCTT+TGG | 0.325606 | 5_2:+7001992 | None:intergenic |
| AGCTTGGGGAACAAGTTAAT+AGG | 0.327660 | 5_2:-7000351 | Msa0753340:CDS |
| AGATGTTTCGTTCTTCAAAA+TGG | 0.329139 | 5_2:-7003608 | Msa0753340:CDS |
| CTCCTCTAATCTTCTGATAT+GGG | 0.332595 | 5_2:+7000798 | None:intergenic |
| GCAAGAATCAAATGCTGAAT+TGG | 0.334048 | 5_2:-7001331 | Msa0753340:CDS |
| ACGCAAAAGTGATTGTTTAG+AGG | 0.337322 | 5_2:-6998824 | Msa0753340:three_prime_UTR |
| TGTTTAACTGTTCCTGCAAT+TGG | 0.337470 | 5_2:+7000953 | None:intergenic |
| CTCCAAATGGGATGCCTCTT+GGG | 0.337850 | 5_2:+7001686 | None:intergenic |
| TGCCTCTTGGGAACTTTCCT+TGG | 0.342709 | 5_2:+7001698 | None:intergenic |
| GCTTTCTCTAATCTCTTTGT+TGG | 0.351234 | 5_2:+7003005 | None:intergenic |
| TTCGCAATGCTTCCTCGGCT+TGG | 0.354438 | 5_2:+7000692 | None:intergenic |
| TGAAACTCACATTGAGAATC+TGG | 0.362265 | 5_2:-7000887 | Msa0753340:CDS |
| CGAAACAGTCAAGTATTATC+AGG | 0.373302 | 5_2:-7002940 | Msa0753340:CDS |
| AATGGAGGAGTGAGAAGAAT+AGG | 0.381314 | 5_2:-7003590 | Msa0753340:CDS |
| CAAATCTGAACTCGCTGCTT+TGG | 0.381316 | 5_2:-7001652 | Msa0753340:CDS |
| TTCCCAAGAGGCATCCCATT+TGG | 0.381326 | 5_2:-7001688 | Msa0753340:CDS |
| AAACCAGTTTGTTCCAGTTA+TGG | 0.383737 | 5_2:-7001868 | Msa0753340:CDS |
| TCGAAAATCAGAAGAAGCTT+GGG | 0.384283 | 5_2:-7000366 | Msa0753340:CDS |
| GCTTGGGGAACAAGTTAATA+GGG | 0.389725 | 5_2:-7000350 | Msa0753340:CDS |
| TACTTGACTGTTTCGTATAC+CGG | 0.390138 | 5_2:+7002948 | None:intergenic |
| GAATAAACTAATGTTTATAA+TGG | 0.391060 | 5_2:-6998913 | Msa0753340:three_prime_UTR |
| GAGAAAACTCTCAGCCCTTA+TGG | 0.392278 | 5_2:+6999010 | None:intergenic |
| CAATGCTTCCTCGGCTTGGA+TGG | 0.396921 | 5_2:+7000696 | None:intergenic |
| GAGGCATTAACAGCAGCATT+TGG | 0.397470 | 5_2:+7001828 | None:intergenic |
| TCATTTGCATTGAGAGTCTC+TGG | 0.397576 | 5_2:+7000620 | None:intergenic |
| AGAGTTTCATCTCTAACTCT+TGG | 0.402659 | 5_2:+7001211 | None:intergenic |
| TCCTCATCATTCAAAAGAAA+TGG | 0.405576 | 5_2:-6999807 | Msa0753340:CDS |
| TGTCATTGAAATAACGTTGT+TGG | 0.412602 | 5_2:-7003919 | Msa0753340:five_prime_UTR |
| AAATTCTCTAGCTACCATTA+AGG | 0.413944 | 5_2:-7000830 | Msa0753340:CDS |
| TTGTCTGATTTCTTCGACAA+AGG | 0.415014 | 5_2:+7001410 | None:intergenic |
| AGAAGAAGTAAGAAATAGAT+TGG | 0.415538 | 5_2:-6999217 | Msa0753340:CDS |
| TTCCTTCAATGACGACAATT+CGG | 0.418972 | 5_2:+6999161 | None:intergenic |
| ACGATGCCAAAGTGAGAAAT+AGG | 0.420452 | 5_2:-7001461 | Msa0753340:CDS |
| TCTCCAAATGGGATGCCTCT+TGG | 0.421036 | 5_2:+7001685 | None:intergenic |
| GTGTAAGAACAGAAGGAGTT+AGG | 0.422513 | 5_2:+7003825 | None:intergenic |
| GACCGAATTGTCGTCATTGA+AGG | 0.423001 | 5_2:-6999163 | Msa0753340:CDS |
| CAGAAGATTAGAGGAGGAGA+TGG | 0.426220 | 5_2:-7000791 | Msa0753340:CDS |
| ATATTTCAGGTGTTACAATC+AGG | 0.434804 | 5_2:-7003074 | Msa0753340:intron |
| GCTAGAGCAAAGCCAATTGC+AGG | 0.435772 | 5_2:-7000965 | Msa0753340:CDS |
| TGAGTCTCTCCATCTCCAAA+TGG | 0.437670 | 5_2:+7001673 | None:intergenic |
| AACCCATATCAGAAGATTAG+AGG | 0.442026 | 5_2:-7000800 | Msa0753340:CDS |
| TATTATCAGGATCCGAAGAC+TGG | 0.443472 | 5_2:-7002927 | Msa0753340:CDS |
| TTGGGAACTTTCCTTGGAAA+GGG | 0.444214 | 5_2:+7001704 | None:intergenic |
| AGACTATGAGATATTAAAAC+AGG | 0.445367 | 5_2:-7001010 | Msa0753340:CDS |
| CTCATGTCTCTCTTCCCATC+AGG | 0.446018 | 5_2:-7002701 | Msa0753340:CDS |
| CTCGAAAATCAGAAGAAGCT+TGG | 0.447142 | 5_2:-7000367 | Msa0753340:CDS |
| TAGACGCAGTTCACTTGCTT+CGG | 0.447539 | 5_2:+7000552 | None:intergenic |
| TATCAAAAGCTAGCGCCGTC+GGG | 0.449925 | 5_2:-7002770 | Msa0753340:CDS |
| CTTGGGAACTTTCCTTGGAA+AGG | 0.451320 | 5_2:+7001703 | None:intergenic |
| AAATTGTCGGTGGGAGAATC+CGG | 0.455464 | 5_2:-7002967 | Msa0753340:CDS |
| GCGGAGATGAACACTCATAT+TGG | 0.455757 | 5_2:+7000929 | None:intergenic |
| GACACTCTTGAGGTTTCTTA+CGG | 0.459347 | 5_2:+6999032 | None:intergenic |
| TTGGTGCTGTCAATAGTTCC+TGG | 0.465693 | 5_2:-7003041 | Msa0753340:CDS |
| AAACCTCAAGAGTGTCCATA+AGG | 0.465783 | 5_2:-6999025 | Msa0753340:CDS |
| GGTCTTTCGCAATGCTTCCT+CGG | 0.468804 | 5_2:+7000687 | None:intergenic |
| CTTTATTTCACTCTTTAGCT+GGG | 0.470948 | 5_2:+6999943 | None:intergenic |
| CTCTTAAATGAACAAGTAGA+AGG | 0.471330 | 5_2:-7000265 | Msa0753340:CDS |
| CTTTACAATTTGTTTCCTAA+GGG | 0.471588 | 5_2:+7001593 | None:intergenic |
| AGAGACATGAGAGGGCTTTG+TGG | 0.474075 | 5_2:+7002713 | None:intergenic |
| TGGCATCGTCCATGCGTTTG+TGG | 0.475881 | 5_2:+7001475 | None:intergenic |
| CTAGCTTATGTACAAGCTTG+TGG | 0.476951 | 5_2:+7000983 | None:intergenic |
| ATTTGGAGATTCCGCGGCAC+GGG | 0.477344 | 5_2:+7001845 | None:intergenic |
| GCTTCAATTCAATGCTACTA+AGG | 0.477435 | 5_2:-7003550 | Msa0753340:intron |
| GAGTTTCATCTCTAACTCTT+GGG | 0.477504 | 5_2:+7001212 | None:intergenic |
| CGCTGCTTTGGCGAGGCACG+TGG | 0.482197 | 5_2:-7001640 | Msa0753340:CDS |
| ATGGGGAAATTGAAATGTAT+AGG | 0.483639 | 5_2:-7001077 | Msa0753340:CDS |
| GGTTCTTGCCGTGCAGGACC+TGG | 0.487908 | 5_2:-7001310 | Msa0753340:CDS |
| CACGCGGACAATAGTCTTAG+TGG | 0.488677 | 5_2:-6999192 | Msa0753340:CDS |
| GGGCCATAACTGGAACAAAC+TGG | 0.489446 | 5_2:+7001865 | None:intergenic |
| AGACAGAATGTGACAATGTC+AGG | 0.491642 | 5_2:-7001503 | Msa0753340:CDS |
| TCAAGTTCTGATGACAGCTC+TGG | 0.494881 | 5_2:-7001945 | Msa0753340:CDS |
| TGAATTGGTTCTTGCCGTGC+AGG | 0.496687 | 5_2:-7001316 | Msa0753340:CDS |
| CCTGAATCTCTTCTCAATGC+TGG | 0.497104 | 5_2:+6999901 | None:intergenic |
| GTCTAAACATTCCAATGGAC+AGG | 0.497144 | 5_2:-7001250 | Msa0753340:CDS |
| TTGTCTTTCACCTTCGACCT+CGG | 0.497897 | 5_2:+6999068 | None:intergenic |
| GAGTCTCTCCATCTCCAAAT+GGG | 0.499624 | 5_2:+7001674 | None:intergenic |
| TCCAGTTATGGCCCGTGCCG+CGG | 0.500299 | 5_2:-7001856 | Msa0753340:CDS |
| CACAATTGCGTCATTGAAGA+AGG | 0.500768 | 5_2:-7000140 | Msa0753340:CDS |
| TCAATGTCATTCATAGCAGC+AGG | 0.501038 | 5_2:+7000907 | None:intergenic |
| AGCCCTTATGGACACTCTTG+AGG | 0.501555 | 5_2:+6999022 | None:intergenic |
| AAGAGTGAAATAAAGAAGAA+AGG | 0.501656 | 5_2:-6999935 | Msa0753340:CDS |
| AAAGTCAAAGGAAACTGCCT+TGG | 0.503241 | 5_2:-6999584 | Msa0753340:CDS |
| AACAACTTCATCTATGAAGA+AGG | 0.504107 | 5_2:-6999554 | Msa0753340:CDS |
| TTCATCTATGAAGAAGGAAA+AGG | 0.506959 | 5_2:-6999548 | Msa0753340:CDS |
| CTCAAATTTGCCGAGGTCGA+AGG | 0.512604 | 5_2:-6999078 | Msa0753340:CDS |
| ACATGGAACTACAGACCCTT+AGG | 0.513199 | 5_2:-7001608 | Msa0753340:CDS |
| CTGTGACCTATTTCTCACTT+TGG | 0.514705 | 5_2:+7001455 | None:intergenic |
| GGGAAATTGAAATGTATAGG+AGG | 0.515977 | 5_2:-7001074 | Msa0753340:CDS |
| CATTATCTTGAAAGATGAAA+GGG | 0.517094 | 5_2:-7001535 | Msa0753340:CDS |
| TCAGAGCAGAATTGTGGAGC+TGG | 0.519772 | 5_2:-6999521 | Msa0753340:CDS |
| GAAGGAAAGAAACAAATCAA+TGG | 0.521587 | 5_2:-6999145 | Msa0753340:CDS |
| TTTATCGTGTTCCTGTCCAT+TGG | 0.522075 | 5_2:+7001239 | None:intergenic |
| CTGCAGTGTATAGCTGTAGC+AGG | 0.523315 | 5_2:-6998969 | Msa0753340:three_prime_UTR |
| AGTATGGGCGATTCAACAAA+CGG | 0.523348 | 5_2:-7001738 | Msa0753340:CDS |
| ATTGTAAAGGAAAGCAAAAG+AGG | 0.523810 | 5_2:-7001579 | Msa0753340:CDS |
| GCAGGACCTGGAAGAGATGT+TGG | 0.525811 | 5_2:-7001298 | Msa0753340:CDS |
| TTTACATCAGAGATCACAAT+GGG | 0.529077 | 5_2:-7001790 | Msa0753340:CDS |
| TTCTCAAAATGCCCTTTCCA+AGG | 0.530388 | 5_2:-7001715 | Msa0753340:CDS |
| TCAATAGTTCCTGGTGACAT+TGG | 0.530888 | 5_2:-7003032 | Msa0753340:CDS |
| CGTCATCTAGCTCAGAGCTC+GGG | 0.531611 | 5_2:-7001764 | Msa0753340:CDS |
| TAACATTTCAAATACCAAGA+AGG | 0.531925 | 5_2:+6998873 | None:intergenic |
| TACCTTTGATGAAAATGAGA+AGG | 0.534206 | 5_2:-7000593 | Msa0753340:CDS |
| ATAAACAACAGAACGTCTAG+TGG | 0.536249 | 5_2:-7001984 | Msa0753340:CDS |
| TGCTTCGGTCAATGCTCTCA+TGG | 0.536262 | 5_2:+7000567 | None:intergenic |
| AATAGGTCACAGTTGGAAAG+TGG | 0.539166 | 5_2:-7001444 | Msa0753340:CDS |
| TTATCAAAAGCTAGCGCCGT+CGG | 0.542147 | 5_2:-7002771 | Msa0753340:CDS |
| TATTTCAGGTGTTACAATCA+GGG | 0.542788 | 5_2:-7003073 | Msa0753340:intron |
| CATTTGGAGATTCCGCGGCA+CGG | 0.543245 | 5_2:+7001844 | None:intergenic |
| AGAAATCTTAAGAACTGACT+TGG | 0.543909 | 5_2:-7000239 | Msa0753340:CDS |
| CGGTTCAAGATGGAAATTGT+CGG | 0.544548 | 5_2:-7002980 | Msa0753340:CDS |
| TCAGATACAGCAGATGTTGG+TGG | 0.544798 | 5_2:-7000413 | Msa0753340:CDS |
| TCTGAAACATTGTTACATCA+AGG | 0.545037 | 5_2:-7000190 | Msa0753340:CDS |
| TCGTCATCTAGCTCAGAGCT+CGG | 0.545721 | 5_2:-7001765 | Msa0753340:CDS |
| TTGTATCTATTTGATTGCAA+AGG | 0.545922 | 5_2:+7000443 | None:intergenic |
| TGAAGTTGTTGAACTTTCCA+AGG | 0.546447 | 5_2:+6999567 | None:intergenic |
| GGACGCAACCAACTTTCTGA+TGG | 0.547926 | 5_2:-6999869 | Msa0753340:CDS |
| AGTGAGAAATAGGTCACAGT+TGG | 0.548975 | 5_2:-7001451 | Msa0753340:CDS |
| TAGACTATTGAAGTCAGAGT+TGG | 0.550029 | 5_2:-7000050 | Msa0753340:CDS |
| GAGAAAGCTACGGTTCAAGA+TGG | 0.550233 | 5_2:-7002990 | Msa0753340:CDS |
| CAGCATTGAGAAGAGATTCA+GGG | 0.550761 | 5_2:-6999900 | Msa0753340:CDS |
| AACTGGAACAAACTGGTTTG+TGG | 0.550964 | 5_2:+7001872 | None:intergenic |
| GTTGGTCTTCCAATGTCACC+AGG | 0.557975 | 5_2:+7003023 | None:intergenic |
| GGAACTTCAGAGCAGAATTG+TGG | 0.558888 | 5_2:-6999527 | Msa0753340:CDS |
| GGAACAAACTGGTTTGTGGT+GGG | 0.559149 | 5_2:+7001876 | None:intergenic |
| AACCTCAAGAGTGTCCATAA+GGG | 0.560828 | 5_2:-6999024 | Msa0753340:CDS |
| ACAATCAGGGGTGGATGCAT+TGG | 0.564604 | 5_2:-7003060 | Msa0753340:CDS |
| GGCGAGGCACGTGGATGTGT+CGG | 0.566205 | 5_2:-7001631 | Msa0753340:CDS |
| GCACGTGGATGTGTCGGACA+TGG | 0.566394 | 5_2:-7001625 | Msa0753340:CDS |
| TCATTATCTTGAAAGATGAA+AGG | 0.568558 | 5_2:-7001536 | Msa0753340:CDS |
| ACTTATGAAGAAATCAATTG+AGG | 0.571259 | 5_2:-7000215 | Msa0753340:CDS |
| CCTTAGGAAACAAATTGTAA+AGG | 0.572841 | 5_2:-7001592 | Msa0753340:CDS |
| CTGCTACAGCTATACACTGC+AGG | 0.574967 | 5_2:+6998970 | None:intergenic |
| GGAAATTGAAATGTATAGGA+GGG | 0.575835 | 5_2:-7001073 | Msa0753340:CDS |
| TGAAGCTGATATAGAAGCAA+TGG | 0.579079 | 5_2:-7000749 | Msa0753340:CDS |
| TGCGTCATTGAAGAAGGAAG+CGG | 0.583079 | 5_2:-7000134 | Msa0753340:CDS |
| AGAGGCATCCCATTTGGAGA+TGG | 0.583581 | 5_2:-7001682 | Msa0753340:CDS |
| CTTCCCATCAGGAATTCTCA+TGG | 0.584077 | 5_2:-7002690 | Msa0753340:CDS |
| AATTCAGATACAGCAGATGT+TGG | 0.585982 | 5_2:-7000416 | Msa0753340:CDS |
| AAAGGAAAGCAAAAGAGGGC+AGG | 0.588422 | 5_2:-7001574 | Msa0753340:CDS |
| TAAATCATGCATCGGTGTCG+AGG | 0.589755 | 5_2:+7001809 | None:intergenic |
| ACGTAACGTGTAAGAACAGA+AGG | 0.591838 | 5_2:+7003818 | None:intergenic |
| ATTTCAGGTGTTACAATCAG+GGG | 0.591987 | 5_2:-7003072 | Msa0753340:intron |
| AATATGTCTAAACATTCCAA+TGG | 0.592097 | 5_2:-7001255 | Msa0753340:CDS |
| AATTCAATGATAAGAGCTCA+AGG | 0.592406 | 5_2:-7002319 | Msa0753340:CDS |
| TCAGAGCTCGGGTTAAGTAT+GGG | 0.598271 | 5_2:-7001753 | Msa0753340:CDS |
| AGAACTCAAGGAGCAGTCAG+AGG | 0.599935 | 5_2:-7000860 | Msa0753340:CDS |
| TACAGCTGAAAGGCTTCAAG+AGG | 0.600122 | 5_2:-7000647 | Msa0753340:CDS |
| TTCAAGATGGAAATTGTCGG+TGG | 0.600830 | 5_2:-7002977 | Msa0753340:CDS |
| GCAGGTGTACTTTGCAACAG+TGG | 0.601752 | 5_2:-6998951 | Msa0753340:three_prime_UTR |
| TCAGGGCCTGATAAAGTCAA+AGG | 0.602212 | 5_2:-6999596 | Msa0753340:intron |
| AGCATTGGATGATCTTGTCA+AGG | 0.603938 | 5_2:-7001154 | Msa0753340:CDS |
| TGTTTCGTTCTTCAAAATGG+AGG | 0.604012 | 5_2:-7003605 | Msa0753340:CDS |
| AATGTATAGGAGGGACAAAG+AGG | 0.604042 | 5_2:-7001064 | Msa0753340:CDS |
| GAACAAACTGGTTTGTGGTG+GGG | 0.604811 | 5_2:+7001877 | None:intergenic |
| CTGAACTCGCTGCTTTGGCG+AGG | 0.604966 | 5_2:-7001647 | Msa0753340:CDS |
| TTTCTCAGTCCAATTTCGCA+GGG | 0.605119 | 5_2:+7001912 | None:intergenic |
| AAGTAAAATGAGAAATCTCA+AGG | 0.605138 | 5_2:-7000092 | Msa0753340:CDS |
| CTCTGATGTAAATCATGCAT+CGG | 0.607162 | 5_2:+7001801 | None:intergenic |
| AGCAGCATTTGGAGATTCCG+CGG | 0.610316 | 5_2:+7001839 | None:intergenic |
| TCGGTGGTTGATCAACTCGT+TGG | 0.613976 | 5_2:+7003775 | None:intergenic |
| TGGAACAAACTGGTTTGTGG+TGG | 0.614538 | 5_2:+7001875 | None:intergenic |
| AAGAGGGCAGGATCTCATGA+AGG | 0.615741 | 5_2:-7001562 | Msa0753340:CDS |
| CAGGTCTTTCCACAAACGCA+TGG | 0.619261 | 5_2:-7001484 | Msa0753340:CDS |
| TCAGGTGTTACAATCAGGGG+TGG | 0.620277 | 5_2:-7003069 | Msa0753340:intron |
| TTGTAAAGGAAAGCAAAAGA+GGG | 0.620965 | 5_2:-7001578 | Msa0753340:CDS |
| GCAGGCTCCAATATATCAAG+AGG | 0.621129 | 5_2:+6998988 | None:intergenic |
| AAAATGCTAATACAGCTGAA+AGG | 0.622552 | 5_2:-7000657 | Msa0753340:CDS |
| GCAAAGAGCCATCCAAGCCG+AGG | 0.624482 | 5_2:-7000704 | Msa0753340:CDS |
| TGAATTGTTGATAACTGGAA+CGG | 0.628105 | 5_2:-7003726 | Msa0753340:five_prime_UTR |
| AAGAGATTCAGGGATAGTAA+CGG | 0.632337 | 5_2:-6999890 | Msa0753340:CDS |
| ATGGGAAGAGAGACATGAGA+GGG | 0.634288 | 5_2:+7002705 | None:intergenic |
| TCAAGATGGAAATTGTCGGT+GGG | 0.636130 | 5_2:-7002976 | Msa0753340:CDS |
| ATCACCATGAGAATTCCTGA+TGG | 0.636391 | 5_2:+7002686 | None:intergenic |
| TCACCATGAGAATTCCTGAT+GGG | 0.636505 | 5_2:+7002687 | None:intergenic |
| ATCAAAAGCTAGCGCCGTCG+GGG | 0.639118 | 5_2:-7002769 | Msa0753340:CDS |
| AAAGAGATTAGAGAAAGCTA+CGG | 0.643270 | 5_2:-7003000 | Msa0753340:CDS |
| TGTGGAGCTGGAGAACAAAG+TGG | 0.648905 | 5_2:-6999509 | Msa0753340:CDS |
| TCAAGGAACCAATTCAGCAA+CGG | 0.650410 | 5_2:-7002302 | Msa0753340:CDS |
| ATTGTTACATCAAGGAACTG+TGG | 0.651765 | 5_2:-7000182 | Msa0753340:CDS |
| CCATATCAGAAGATTAGAGG+AGG | 0.654206 | 5_2:-7000797 | Msa0753340:CDS |
| CATCTCTTCCAGGTCCTGCA+CGG | 0.656396 | 5_2:+7001302 | None:intergenic |
| CGAAAATCAGAAGAAGCTTG+GGG | 0.658269 | 5_2:-7000365 | Msa0753340:CDS |
| TAAACAACAGAACGTCTAGT+GGG | 0.662018 | 5_2:-7001983 | Msa0753340:CDS |
| TTCCAAGGAAAGTTCCCAAG+AGG | 0.662303 | 5_2:-7001700 | Msa0753340:CDS |
| GATGGGAAGAGAGACATGAG+AGG | 0.665257 | 5_2:+7002704 | None:intergenic |
| AATGAGTCTCAAATTTGCCG+AGG | 0.681950 | 5_2:-6999085 | Msa0753340:CDS |
| AGTTAATAGGGATTTCTCTG+AGG | 0.682694 | 5_2:-7000338 | Msa0753340:CDS |
| TCAGAACGTTACTTTACACG+AGG | 0.685129 | 5_2:-6999476 | Msa0753340:intron |
| ATGTCATTCATAGCAGCAGG+CGG | 0.688666 | 5_2:+7000910 | None:intergenic |
| GTCAACTAAAGCCAATTACG+AGG | 0.689810 | 5_2:-7000479 | Msa0753340:CDS |
| ATTTACATCAGAGATCACAA+TGG | 0.703701 | 5_2:-7001791 | Msa0753340:CDS |
| AGAACTTGACAATGTAACGT+CGG | 0.708038 | 5_2:+7001959 | None:intergenic |
| GGAGCTGGAGAACAAAGTGG+AGG | 0.710392 | 5_2:-6999506 | Msa0753340:CDS |
| AAGAAATAGATTGGAACACG+CGG | 0.713897 | 5_2:-6999208 | Msa0753340:CDS |
| GTTCACAGAAACATCCCCGA+CGG | 0.720467 | 5_2:+7002755 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTATTATTAATAA+AGG | + | chr5_2:6999366-6999385 | None:intergenic | 0.0% |
| !! | TAAAAAAAAATTACTAAACT+CGG | + | chr5_2:6998904-6998923 | None:intergenic | 10.0% |
| !!! | TCTTTTATATTAACATAAAA+AGG | + | chr5_2:7003032-7003051 | None:intergenic | 10.0% |
| !! | TTATATTATAACTGAAATCT+AGG | + | chr5_2:6999390-6999409 | None:intergenic | 15.0% |
| !!! | TGATTTTTTGATTAATAAAC+AGG | - | chr5_2:7000124-7000143 | Msa0753340:CDS | 15.0% |
| !! | AAAAAAATGATCAAATTCAA+AGG | - | chr5_2:7000168-7000187 | Msa0753340:CDS | 15.0% |
| !! | AAAAAAATTATAGACTTGTA+TGG | - | chr5_2:7001561-7001580 | Msa0753340:CDS | 15.0% |
| !! | AAAAAATTATAGACTTGTAT+GGG | - | chr5_2:7001562-7001581 | Msa0753340:CDS | 15.0% |
| !! | GAATAAACTAATGTTTATAA+TGG | - | chr5_2:7003744-7003763 | Msa0753340:five_prime_UTR | 15.0% |
| !! | ATCTTATGTTTCAGATATTA+AGG | + | chr5_2:6998791-6998810 | None:intergenic | 20.0% |
| !! | GAATGAATAATCTAATGTAT+TGG | - | chr5_2:6999248-6999267 | Msa0753340:CDS | 20.0% |
| !! | CAGAAAATTGAAATATGATA+GGG | + | chr5_2:6999436-6999455 | None:intergenic | 20.0% |
| !!! | CTATCATATTTCAATTTTCT+GGG | - | chr5_2:6999435-6999454 | Msa0753340:intron | 20.0% |
| !!! | TATCATATTTTGATTCTCAA+TGG | - | chr5_2:6999495-6999514 | Msa0753340:CDS | 20.0% |
| !!! | ATATAATTTTTTGCTCTCAA+CGG | - | chr5_2:6999771-6999790 | Msa0753340:intron | 20.0% |
| !!! | TGTCATTGTTATCAATTTTT+TGG | - | chr5_2:6999848-6999867 | Msa0753340:CDS | 20.0% |
| !!! | GTCATTGTTATCAATTTTTT+GGG | - | chr5_2:6999849-6999868 | Msa0753340:CDS | 20.0% |
| !!! | TCATTGTTATCAATTTTTTG+GGG | - | chr5_2:6999850-6999869 | Msa0753340:CDS | 20.0% |
| !!! | CATTATTATTTTTCCATTTC+TGG | - | chr5_2:7000209-7000228 | Msa0753340:CDS | 20.0% |
| !! | TTTGTTTGTATATATTCAAC+TGG | - | chr5_2:7000502-7000521 | Msa0753340:CDS | 20.0% |
| !! | AAAAATTATAGACTTGTATG+GGG | - | chr5_2:7001563-7001582 | Msa0753340:CDS | 20.0% |
| !!! | TTTTAATATCTCATAGTCTA+GGG | + | chr5_2:7001646-7001665 | None:intergenic | 20.0% |
| !!! | AAGCAATTTTTTTGTTGATT+GGG | + | chr5_2:7002826-7002845 | None:intergenic | 20.0% |
| !! | TATAAAAGATTGTTTATGTC+AGG | - | chr5_2:7003043-7003062 | Msa0753340:CDS | 20.0% |
| !! | ATAAAAGATTGTTTATGTCA+GGG | - | chr5_2:7003044-7003063 | Msa0753340:CDS | 20.0% |
| ! | AAAAAAATTACTAAACTCGG+TGG | + | chr5_2:6998901-6998920 | None:intergenic | 25.0% |
| !!! | TACATTGAATTGTTGATAAC+TGG | - | chr5_2:6998926-6998945 | Msa0753340:three_prime_UTR | 25.0% |
| ! | CCAGAAAATTGAAATATGAT+AGG | + | chr5_2:6999437-6999456 | None:intergenic | 25.0% |
| !! | CCTATCATATTTCAATTTTC+TGG | - | chr5_2:6999434-6999453 | Msa0753340:intron | 25.0% |
| !!! | AATTTTCTGGGAAATGAAAA+TGG | - | chr5_2:6999447-6999466 | Msa0753340:intron | 25.0% |
| !!! | CTTCACTCAAAATTTTGATT+AGG | + | chr5_2:7000071-7000090 | None:intergenic | 25.0% |
| !!! | AAATTCAAAGGTACTACAAA+GGG | - | chr5_2:7000180-7000199 | Msa0753340:CDS | 25.0% |
| ! | AAAATTCTTGTGACTTCTTA+CGG | - | chr5_2:7000440-7000459 | Msa0753340:CDS | 25.0% |
| !!! | CTTCACATGTTTTTTACTTT+CGG | + | chr5_2:7000597-7000616 | None:intergenic | 25.0% |
| !! | CTTTACAATTTGTTTCCTAA+GGG | + | chr5_2:7001067-7001086 | None:intergenic | 25.0% |
| ! | TCATTATCTTGAAAGATGAA+AGG | - | chr5_2:7001121-7001140 | Msa0753340:CDS | 25.0% |
| ! | CATTATCTTGAAAGATGAAA+GGG | - | chr5_2:7001122-7001141 | Msa0753340:CDS | 25.0% |
| !!! | GCATCTTTTTTAACTGTAAT+CGG | + | chr5_2:7001308-7001327 | None:intergenic | 25.0% |
| ! | AATATGTCTAAACATTCCAA+TGG | - | chr5_2:7001402-7001421 | Msa0753340:CDS | 25.0% |
| !!! | GTTTTAATATCTCATAGTCT+AGG | + | chr5_2:7001647-7001666 | None:intergenic | 25.0% |
| ! | AGACTATGAGATATTAAAAC+AGG | - | chr5_2:7001647-7001666 | Msa0753340:CDS | 25.0% |
| ! | TTGTATCTATTTGATTGCAA+AGG | + | chr5_2:7002217-7002236 | None:intergenic | 25.0% |
| ! | ACTTATGAAGAAATCAATTG+AGG | - | chr5_2:7002442-7002461 | Msa0753340:intron | 25.0% |
| ! | AAGTAAAATGAGAAATCTCA+AGG | - | chr5_2:7002565-7002584 | Msa0753340:intron | 25.0% |
| !!! | TTTGAAAAAGTCACTTTTTG+AGG | - | chr5_2:7002655-7002674 | Msa0753340:intron | 25.0% |
| ! | AAGAGTGAAATAAAGAAGAA+AGG | - | chr5_2:7002722-7002741 | Msa0753340:CDS | 25.0% |
| !!! | AATTTTTTTGTTGATTGGGA+TGG | + | chr5_2:7002822-7002841 | None:intergenic | 25.0% |
| !!! | GAAGCAATTTTTTTGTTGAT+TGG | + | chr5_2:7002827-7002846 | None:intergenic | 25.0% |
| ! | AGAGAAAATAAAAATGCTTG+AGG | - | chr5_2:7002883-7002902 | Msa0753340:intron | 25.0% |
| ! | ACATAAAAAGGAGAAAATGA+AGG | + | chr5_2:7003020-7003039 | None:intergenic | 25.0% |
| ! | AGAAGAAGTAAGAAATAGAT+TGG | - | chr5_2:7003440-7003459 | Msa0753340:intron | 25.0% |
| ! | AATATGTTATTCTTCCTTCT+TGG | - | chr5_2:7003770-7003789 | Msa0753340:five_prime_UTR | 25.0% |
| ! | TAACATTTCAAATACCAAGA+AGG | + | chr5_2:7003787-7003806 | None:intergenic | 25.0% |
| TGTCATTGAAATAACGTTGT+TGG | - | chr5_2:6998738-6998757 | Msa0753340:three_prime_UTR | 30.0% | |
| !! | TGAATTGTTGATAACTGGAA+CGG | - | chr5_2:6998931-6998950 | Msa0753340:three_prime_UTR | 30.0% |
| !!! | GTTGTTTTTGGTGTTTTAGT+TGG | - | chr5_2:6998953-6998972 | Msa0753340:three_prime_UTR | 30.0% |
| AGATGTTTCGTTCTTCAAAA+TGG | - | chr5_2:6999049-6999068 | Msa0753340:CDS | 30.0% | |
| !! | TCTAATGTATTGGTTCTGTT+AGG | - | chr5_2:6999258-6999277 | Msa0753340:intron | 30.0% |
| GATTCTCAATGGTATTAGAT+TGG | - | chr5_2:6999506-6999525 | Msa0753340:CDS | 30.0% | |
| ATGAGATGAGAAATTGTGTT+TGG | - | chr5_2:6999553-6999572 | Msa0753340:CDS | 30.0% | |
| !! | GTTTGGTGATGTAATATTTC+AGG | - | chr5_2:6999570-6999589 | Msa0753340:CDS | 30.0% |
| ! | ATATTTCAGGTGTTACAATC+AGG | - | chr5_2:6999583-6999602 | Msa0753340:CDS | 30.0% |
| ! | TATTTCAGGTGTTACAATCA+GGG | - | chr5_2:6999584-6999603 | Msa0753340:CDS | 30.0% |
| AAAGAGATTAGAGAAAGCTA+CGG | - | chr5_2:6999657-6999676 | Msa0753340:intron | 30.0% | |
| !!! | AATTTTTTGGGGTTATATGC+AGG | - | chr5_2:6999861-6999880 | Msa0753340:CDS | 30.0% |
| !!! | ATTTTTTGGGGTTATATGCA+GGG | - | chr5_2:6999862-6999881 | Msa0753340:CDS | 30.0% |
| ATTTCAAGCAACTTTACATC+TGG | + | chr5_2:7000038-7000057 | None:intergenic | 30.0% | |
| !!! | CATTTTTTTCTTGCATTCTC+TGG | + | chr5_2:7000157-7000176 | None:intergenic | 30.0% |
| !! | CAAATTCAAAGGTACTACAA+AGG | - | chr5_2:7000179-7000198 | Msa0753340:CDS | 30.0% |
| CAATCTTGTATAACCAGAAA+TGG | + | chr5_2:7000225-7000244 | None:intergenic | 30.0% | |
| !! | CATTTCTGGTTATACAAGAT+TGG | - | chr5_2:7000223-7000242 | Msa0753340:CDS | 30.0% |
| !!! | CTTGAGAGTTTTTTATGATG+TGG | - | chr5_2:7000256-7000275 | Msa0753340:CDS | 30.0% |
| TTTCAATAACATTTGCAGAG+AGG | - | chr5_2:7000288-7000307 | Msa0753340:CDS | 30.0% | |
| AATTCAATGATAAGAGCTCA+AGG | - | chr5_2:7000338-7000357 | Msa0753340:CDS | 30.0% | |
| ATTTACATCAGAGATCACAA+TGG | - | chr5_2:7000866-7000885 | Msa0753340:CDS | 30.0% | |
| TTTACATCAGAGATCACAAT+GGG | - | chr5_2:7000867-7000886 | Msa0753340:CDS | 30.0% | |
| ! | CCTTTACAATTTGTTTCCTA+AGG | + | chr5_2:7001068-7001087 | None:intergenic | 30.0% |
| CCTTAGGAAACAAATTGTAA+AGG | - | chr5_2:7001065-7001084 | Msa0753340:CDS | 30.0% | |
| ATTGTAAAGGAAAGCAAAAG+AGG | - | chr5_2:7001078-7001097 | Msa0753340:CDS | 30.0% | |
| TTGTAAAGGAAAGCAAAAGA+GGG | - | chr5_2:7001079-7001098 | Msa0753340:CDS | 30.0% | |
| ! | TGATGAAGATCAAAAAGCAT+TGG | - | chr5_2:7001488-7001507 | Msa0753340:CDS | 30.0% |
| ATGGGGAAATTGAAATGTAT+AGG | - | chr5_2:7001580-7001599 | Msa0753340:CDS | 30.0% | |
| GGAAATTGAAATGTATAGGA+GGG | - | chr5_2:7001584-7001603 | Msa0753340:CDS | 30.0% | |
| AAATTCTCTAGCTACCATTA+AGG | - | chr5_2:7001827-7001846 | Msa0753340:CDS | 30.0% | |
| !! | TGTATTAGCATTTTTCAGTC+TGG | + | chr5_2:7001994-7002013 | None:intergenic | 30.0% |
| AAAATGCTAATACAGCTGAA+AGG | - | chr5_2:7002000-7002019 | Msa0753340:CDS | 30.0% | |
| TACCTTTGATGAAAATGAGA+AGG | - | chr5_2:7002064-7002083 | Msa0753340:intron | 30.0% | |
| CTCTTAAATGAACAAGTAGA+AGG | - | chr5_2:7002392-7002411 | Msa0753340:intron | 30.0% | |
| AGAAATCTTAAGAACTGACT+TGG | - | chr5_2:7002418-7002437 | Msa0753340:intron | 30.0% | |
| ! | TCTGAAACATTGTTACATCA+AGG | - | chr5_2:7002467-7002486 | Msa0753340:intron | 30.0% |
| ! | CTTTATTTCACTCTTTAGCT+GGG | + | chr5_2:7002717-7002736 | None:intergenic | 30.0% |
| ! | TCTTTATTTCACTCTTTAGC+TGG | + | chr5_2:7002718-7002737 | None:intergenic | 30.0% |
| ! | TTTTAGATCCATCAGAAAGT+TGG | + | chr5_2:7002799-7002818 | None:intergenic | 30.0% |
| TCCTCATCATTCAAAAGAAA+TGG | - | chr5_2:7002850-7002869 | Msa0753340:intron | 30.0% | |
| CATCAATGATATGAAGACAT+AGG | - | chr5_2:7002918-7002937 | Msa0753340:CDS | 30.0% | |
| AACAACTTCATCTATGAAGA+AGG | - | chr5_2:7003103-7003122 | Msa0753340:intron | 30.0% | |
| TTCATCTATGAAGAAGGAAA+AGG | - | chr5_2:7003109-7003128 | Msa0753340:intron | 30.0% | |
| CAAGACTAAGTTTGTAATTC+AGG | + | chr5_2:7003270-7003289 | None:intergenic | 30.0% | |
| !! | ATTACAAACTTAGTCTTGCT+TGG | - | chr5_2:7003272-7003291 | Msa0753340:intron | 30.0% |
| AAACATTCGTTGTTGAAATG+TGG | - | chr5_2:7003311-7003330 | Msa0753340:intron | 30.0% | |
| GAAGGAAAGAAACAAATCAA+TGG | - | chr5_2:7003512-7003531 | Msa0753340:intron | 30.0% | |
| ! | GTTTTCTCCTCTTGATATAT+TGG | - | chr5_2:7003662-7003681 | Msa0753340:five_prime_UTR | 30.0% |
| !! | ATAACTGGAACGGTTGTTTT+TGG | - | chr5_2:6998941-6998960 | Msa0753340:three_prime_UTR | 35.0% |
| !!! | GTTTTTGGTGTTTTAGTTGG+TGG | - | chr5_2:6998956-6998975 | Msa0753340:three_prime_UTR | 35.0% |
| TGTTTCGTTCTTCAAAATGG+AGG | - | chr5_2:6999052-6999071 | Msa0753340:CDS | 35.0% | |
| GCTTCAATTCAATGCTACTA+AGG | - | chr5_2:6999107-6999126 | Msa0753340:CDS | 35.0% | |
| CAATTCAATGCTACTAAGGT+AGG | - | chr5_2:6999111-6999130 | Msa0753340:CDS | 35.0% | |
| ! | ATTTCAGGTGTTACAATCAG+GGG | - | chr5_2:6999585-6999604 | Msa0753340:CDS | 35.0% |
| GCTTTCTCTAATCTCTTTGT+TGG | + | chr5_2:6999655-6999674 | None:intergenic | 35.0% | |
| TACTTGACTGTTTCGTATAC+CGG | + | chr5_2:6999712-6999731 | None:intergenic | 35.0% | |
| CGAAACAGTCAAGTATTATC+AGG | - | chr5_2:6999717-6999736 | Msa0753340:intron | 35.0% | |
| !!! | TCGTTGATTTTTCCAGTCTT+CGG | + | chr5_2:6999745-6999764 | None:intergenic | 35.0% |
| !!! | TTTTTTGGGGTTATATGCAG+GGG | - | chr5_2:6999863-6999882 | Msa0753340:CDS | 35.0% |
| !! | AAAGGTACTACAAAGGGAAT+TGG | - | chr5_2:7000186-7000205 | Msa0753340:CDS | 35.0% |
| AGTAAGCATTTCACTCATTC+AGG | - | chr5_2:7000414-7000433 | Msa0753340:CDS | 35.0% | |
| ! | CGTTCTGTTGTTTATTGCTT+TGG | + | chr5_2:7000668-7000687 | None:intergenic | 35.0% |
| ATAAACAACAGAACGTCTAG+TGG | - | chr5_2:7000673-7000692 | Msa0753340:CDS | 35.0% | |
| TAAACAACAGAACGTCTAGT+GGG | - | chr5_2:7000674-7000693 | Msa0753340:CDS | 35.0% | |
| AGAACTTGACAATGTAACGT+CGG | + | chr5_2:7000701-7000720 | None:intergenic | 35.0% | |
| ! | AAACCAGTTTGTTCCAGTTA+TGG | - | chr5_2:7000789-7000808 | Msa0753340:CDS | 35.0% |
| CTCTGATGTAAATCATGCAT+CGG | + | chr5_2:7000859-7000878 | None:intergenic | 35.0% | |
| TTGTCTGATTTCTTCGACAA+AGG | + | chr5_2:7001250-7001269 | None:intergenic | 35.0% | |
| GCAAGAATCAAATGCTGAAT+TGG | - | chr5_2:7001326-7001345 | Msa0753340:CDS | 35.0% | |
| GAGTTTCATCTCTAACTCTT+GGG | + | chr5_2:7001448-7001467 | None:intergenic | 35.0% | |
| AGAGTTTCATCTCTAACTCT+TGG | + | chr5_2:7001449-7001468 | None:intergenic | 35.0% | |
| GGGAAATTGAAATGTATAGG+AGG | - | chr5_2:7001583-7001602 | Msa0753340:CDS | 35.0% | |
| TGTTTAACTGTTCCTGCAAT+TGG | + | chr5_2:7001707-7001726 | None:intergenic | 35.0% | |
| TGAAACTCACATTGAGAATC+TGG | - | chr5_2:7001770-7001789 | Msa0753340:CDS | 35.0% | |
| GAATCTGGAAAAAGAACTCA+AGG | - | chr5_2:7001785-7001804 | Msa0753340:CDS | 35.0% | |
| !! | ATGGGTTTCTAGTACCTTAA+TGG | + | chr5_2:7001844-7001863 | None:intergenic | 35.0% |
| AACCCATATCAGAAGATTAG+AGG | - | chr5_2:7001857-7001876 | Msa0753340:CDS | 35.0% | |
| CTCCTCTAATCTTCTGATAT+GGG | + | chr5_2:7001862-7001881 | None:intergenic | 35.0% | |
| GAGATGGAAAAACAAGTACA+GGG | - | chr5_2:7001882-7001901 | Msa0753340:CDS | 35.0% | |
| TGAAGCTGATATAGAAGCAA+TGG | - | chr5_2:7001908-7001927 | Msa0753340:CDS | 35.0% | |
| ! | AGCCTTCTCATTTTCATCAA+AGG | + | chr5_2:7002069-7002088 | None:intergenic | 35.0% |
| CTACAGAAAAATCTAGTGGA+AGG | - | chr5_2:7002125-7002144 | Msa0753340:intron | 35.0% | |
| ! | GTTCAGTTTTACCTCGTAAT+TGG | + | chr5_2:7002192-7002211 | None:intergenic | 35.0% |
| AATTCAGATACAGCAGATGT+TGG | - | chr5_2:7002241-7002260 | Msa0753340:intron | 35.0% | |
| TCGAAAATCAGAAGAAGCTT+GGG | - | chr5_2:7002291-7002310 | Msa0753340:CDS | 35.0% | |
| AGTTAATAGGGATTTCTCTG+AGG | - | chr5_2:7002319-7002338 | Msa0753340:CDS | 35.0% | |
| ATTGTTACATCAAGGAACTG+TGG | - | chr5_2:7002475-7002494 | Msa0753340:intron | 35.0% | |
| CAAGGAAGAAAAAGAAGAAG+AGG | - | chr5_2:7002583-7002602 | Msa0753340:intron | 35.0% | |
| TAGACTATTGAAGTCAGAGT+TGG | - | chr5_2:7002607-7002626 | Msa0753340:intron | 35.0% | |
| !!! | AAAGTCACTTTTTGAGGATG+AGG | - | chr5_2:7002661-7002680 | Msa0753340:intron | 35.0% |
| AAGAGATTCAGGGATAGTAA+CGG | - | chr5_2:7002767-7002786 | Msa0753340:CDS | 35.0% | |
| ! | TTCTTTTGAATGATGAGGAC+TGG | + | chr5_2:7002849-7002868 | None:intergenic | 35.0% |
| ! | GCCATTTCTTTTGAATGATG+AGG | + | chr5_2:7002854-7002873 | None:intergenic | 35.0% |
| TACAAGAGAAAACAGCATTC+AGG | + | chr5_2:7002972-7002991 | None:intergenic | 35.0% | |
| ! | CAGTTTCCTTTGACTTTATC+AGG | + | chr5_2:7003070-7003089 | None:intergenic | 35.0% |
| TGAAGTTGTTGAACTTTCCA+AGG | + | chr5_2:7003093-7003112 | None:intergenic | 35.0% | |
| ! | AGTTTGTAATTCAGGTTTCG+TGG | + | chr5_2:7003262-7003281 | None:intergenic | 35.0% |
| CATTAACATGCCCTTCAAAT+TGG | - | chr5_2:7003377-7003396 | Msa0753340:intron | 35.0% | |
| TCCTGAACAACCAATTTGAA+GGG | + | chr5_2:7003390-7003409 | None:intergenic | 35.0% | |
| ATCCTGAACAACCAATTTGA+AGG | + | chr5_2:7003391-7003410 | None:intergenic | 35.0% | |
| AAGAAATAGATTGGAACACG+CGG | - | chr5_2:7003449-7003468 | Msa0753340:intron | 35.0% | |
| TTCCTTCAATGACGACAATT+CGG | + | chr5_2:7003499-7003518 | None:intergenic | 35.0% | |
| ACGCAAAAGTGATTGTTTAG+AGG | - | chr5_2:7003833-7003852 | Msa0753340:five_prime_UTR | 35.0% | |
| GTGTAAGAACAGAAGGAGTT+AGG | + | chr5_2:6998835-6998854 | None:intergenic | 40.0% | |
| ACGTAACGTGTAAGAACAGA+AGG | + | chr5_2:6998842-6998861 | None:intergenic | 40.0% | |
| !! | TAGTTGGTGGAGTAGTTGTT+TGG | - | chr5_2:6998969-6998988 | Msa0753340:three_prime_UTR | 40.0% |
| !! | AGTTGGTGGAGTAGTTGTTT+GGG | - | chr5_2:6998970-6998989 | Msa0753340:three_prime_UTR | 40.0% |
| AATGGAGGAGTGAGAAGAAT+AGG | - | chr5_2:6999067-6999086 | Msa0753340:CDS | 40.0% | |
| !! | ATTGGTTCTGTTAGGTTCTG+AGG | - | chr5_2:6999266-6999285 | Msa0753340:intron | 40.0% |
| !! | TTGGTTCTGTTAGGTTCTGA+GGG | - | chr5_2:6999267-6999286 | Msa0753340:intron | 40.0% |
| TCAATAGTTCCTGGTGACAT+TGG | - | chr5_2:6999625-6999644 | Msa0753340:intron | 40.0% | |
| CGGTTCAAGATGGAAATTGT+CGG | - | chr5_2:6999677-6999696 | Msa0753340:intron | 40.0% | |
| TTCAAGATGGAAATTGTCGG+TGG | - | chr5_2:6999680-6999699 | Msa0753340:intron | 40.0% | |
| TCAAGATGGAAATTGTCGGT+GGG | - | chr5_2:6999681-6999700 | Msa0753340:intron | 40.0% | |
| TATTATCAGGATCCGAAGAC+TGG | - | chr5_2:6999730-6999749 | Msa0753340:intron | 40.0% | |
| TCACCATGAGAATTCCTGAT+GGG | + | chr5_2:6999973-6999992 | None:intergenic | 40.0% | |
| ATCACCATGAGAATTCCTGA+TGG | + | chr5_2:6999974-6999993 | None:intergenic | 40.0% | |
| TCAAGGAACCAATTCAGCAA+CGG | - | chr5_2:7000355-7000374 | Msa0753340:CDS | 40.0% | |
| GATAGATTGCGTACTGAGTA+AGG | + | chr5_2:7000533-7000552 | None:intergenic | 40.0% | |
| ! | TTCCTGTTTCTCTGCATAAC+AGG | - | chr5_2:7000633-7000652 | Msa0753340:CDS | 40.0% |
| ATCCTGTTATGCAGAGAAAC+AGG | + | chr5_2:7000638-7000657 | None:intergenic | 40.0% | |
| TTTCTCAGTCCAATTTCGCA+GGG | + | chr5_2:7000748-7000767 | None:intergenic | 40.0% | |
| ! | TTTTCTCAGTCCAATTTCGC+AGG | + | chr5_2:7000749-7000768 | None:intergenic | 40.0% |
| !! | AACTGGAACAAACTGGTTTG+TGG | + | chr5_2:7000788-7000807 | None:intergenic | 40.0% |
| AGTATGGGCGATTCAACAAA+CGG | - | chr5_2:7000919-7000938 | Msa0753340:CDS | 40.0% | |
| TTCTCAAAATGCCCTTTCCA+AGG | - | chr5_2:7000942-7000961 | Msa0753340:CDS | 40.0% | |
| TTGGGAACTTTCCTTGGAAA+GGG | + | chr5_2:7000956-7000975 | None:intergenic | 40.0% | |
| AGACAGAATGTGACAATGTC+AGG | - | chr5_2:7001154-7001173 | Msa0753340:CDS | 40.0% | |
| ACGATGCCAAAGTGAGAAAT+AGG | - | chr5_2:7001196-7001215 | Msa0753340:CDS | 40.0% | |
| ! | CTGTGACCTATTTCTCACTT+TGG | + | chr5_2:7001205-7001224 | None:intergenic | 40.0% |
| AGTGAGAAATAGGTCACAGT+TGG | - | chr5_2:7001206-7001225 | Msa0753340:CDS | 40.0% | |
| AATAGGTCACAGTTGGAAAG+TGG | - | chr5_2:7001213-7001232 | Msa0753340:CDS | 40.0% | |
| GTCTAAACATTCCAATGGAC+AGG | - | chr5_2:7001407-7001426 | Msa0753340:CDS | 40.0% | |
| TTTATCGTGTTCCTGTCCAT+TGG | + | chr5_2:7001421-7001440 | None:intergenic | 40.0% | |
| ! | AGCATTGGATGATCTTGTCA+AGG | - | chr5_2:7001503-7001522 | Msa0753340:CDS | 40.0% |
| CTCAAACAAGTGTGTCTCTT+TGG | + | chr5_2:7001541-7001560 | None:intergenic | 40.0% | |
| AATGTATAGGAGGGACAAAG+AGG | - | chr5_2:7001593-7001612 | Msa0753340:CDS | 40.0% | |
| CTAGCTTATGTACAAGCTTG+TGG | + | chr5_2:7001677-7001696 | None:intergenic | 40.0% | |
| TCAATGTCATTCATAGCAGC+AGG | + | chr5_2:7001753-7001772 | None:intergenic | 40.0% | |
| CCTCCTCTAATCTTCTGATA+TGG | + | chr5_2:7001863-7001882 | None:intergenic | 40.0% | |
| CCATATCAGAAGATTAGAGG+AGG | - | chr5_2:7001860-7001879 | Msa0753340:CDS | 40.0% | |
| GGAGATGGAAAAACAAGTAC+AGG | - | chr5_2:7001881-7001900 | Msa0753340:CDS | 40.0% | |
| TCATTTGCATTGAGAGTCTC+TGG | + | chr5_2:7002040-7002059 | None:intergenic | 40.0% | |
| GCGTCTACAGAAAAATCTAG+TGG | - | chr5_2:7002121-7002140 | Msa0753340:intron | 40.0% | |
| TAGTTGACTGAAGCTCTTCT+TGG | + | chr5_2:7002166-7002185 | None:intergenic | 40.0% | |
| GTCAACTAAAGCCAATTACG+AGG | - | chr5_2:7002178-7002197 | Msa0753340:intron | 40.0% | |
| !!! | CTTCTGATTTTCGAGTTGCA+TGG | + | chr5_2:7002285-7002304 | None:intergenic | 40.0% |
| CTCGAAAATCAGAAGAAGCT+TGG | - | chr5_2:7002290-7002309 | Msa0753340:CDS | 40.0% | |
| CGAAAATCAGAAGAAGCTTG+GGG | - | chr5_2:7002292-7002311 | Msa0753340:CDS | 40.0% | |
| AGCTTGGGGAACAAGTTAAT+AGG | - | chr5_2:7002306-7002325 | Msa0753340:CDS | 40.0% | |
| GCTTGGGGAACAAGTTAATA+GGG | - | chr5_2:7002307-7002326 | Msa0753340:CDS | 40.0% | |
| CACAATTGCGTCATTGAAGA+AGG | - | chr5_2:7002517-7002536 | Msa0753340:intron | 40.0% | |
| ! | CAGCATTGAGAAGAGATTCA+GGG | - | chr5_2:7002757-7002776 | Msa0753340:CDS | 40.0% |
| AAAGTCAAAGGAAACTGCCT+TGG | - | chr5_2:7003073-7003092 | Msa0753340:intron | 40.0% | |
| ! | TCAGAACGTTACTTTACACG+AGG | - | chr5_2:7003181-7003200 | Msa0753340:intron | 40.0% |
| AATGAGTCTCAAATTTGCCG+AGG | - | chr5_2:7003572-7003591 | Msa0753340:CDS | 40.0% | |
| GACACTCTTGAGGTTTCTTA+CGG | + | chr5_2:7003628-7003647 | None:intergenic | 40.0% | |
| !! | AAACCTCAAGAGTGTCCATA+AGG | - | chr5_2:7003632-7003651 | Msa0753340:five_prime_UTR | 40.0% |
| !! | AACCTCAAGAGTGTCCATAA+GGG | - | chr5_2:7003633-7003652 | Msa0753340:five_prime_UTR | 40.0% |
| !! | TTGGTGCTGTCAATAGTTCC+TGG | - | chr5_2:6999616-6999635 | Msa0753340:intron | 45.0% |
| GAGAAAGCTACGGTTCAAGA+TGG | - | chr5_2:6999667-6999686 | Msa0753340:intron | 45.0% | |
| AAATTGTCGGTGGGAGAATC+CGG | - | chr5_2:6999690-6999709 | Msa0753340:intron | 45.0% | |
| TTATCAAAAGCTAGCGCCGT+CGG | - | chr5_2:6999886-6999905 | Msa0753340:CDS | 45.0% | |
| ATGGGAAGAGAGACATGAGA+GGG | + | chr5_2:6999955-6999974 | None:intergenic | 45.0% | |
| CTTCCCATCAGGAATTCTCA+TGG | - | chr5_2:6999967-6999986 | Msa0753340:CDS | 45.0% | |
| ! | TCAAGTTCTGATGACAGCTC+TGG | - | chr5_2:7000712-7000731 | Msa0753340:CDS | 45.0% |
| GTTGATACTCCCTGCGAAAT+TGG | - | chr5_2:7000736-7000755 | Msa0753340:CDS | 45.0% | |
| !! | GAACAAACTGGTTTGTGGTG+GGG | + | chr5_2:7000783-7000802 | None:intergenic | 45.0% |
| !! | GGAACAAACTGGTTTGTGGT+GGG | + | chr5_2:7000784-7000803 | None:intergenic | 45.0% |
| !! | TGGAACAAACTGGTTTGTGG+TGG | + | chr5_2:7000785-7000804 | None:intergenic | 45.0% |
| ! | GAGGCATTAACAGCAGCATT+TGG | + | chr5_2:7000832-7000851 | None:intergenic | 45.0% |
| !! | TAAATCATGCATCGGTGTCG+AGG | + | chr5_2:7000851-7000870 | None:intergenic | 45.0% |
| TCAGAGCTCGGGTTAAGTAT+GGG | - | chr5_2:7000904-7000923 | Msa0753340:CDS | 45.0% | |
| CTTGGGAACTTTCCTTGGAA+AGG | + | chr5_2:7000957-7000976 | None:intergenic | 45.0% | |
| TTCCAAGGAAAGTTCCCAAG+AGG | - | chr5_2:7000957-7000976 | Msa0753340:CDS | 45.0% | |
| GAGTCTCTCCATCTCCAAAT+GGG | + | chr5_2:7000986-7001005 | None:intergenic | 45.0% | |
| TGAGTCTCTCCATCTCCAAA+TGG | + | chr5_2:7000987-7001006 | None:intergenic | 45.0% | |
| CAAATCTGAACTCGCTGCTT+TGG | - | chr5_2:7001005-7001024 | Msa0753340:CDS | 45.0% | |
| ACATGGAACTACAGACCCTT+AGG | - | chr5_2:7001049-7001068 | Msa0753340:CDS | 45.0% | |
| AAAGGAAAGCAAAAGAGGGC+AGG | - | chr5_2:7001083-7001102 | Msa0753340:CDS | 45.0% | |
| GCGGAGATGAACACTCATAT+TGG | + | chr5_2:7001731-7001750 | None:intergenic | 45.0% | |
| ATGTCATTCATAGCAGCAGG+CGG | + | chr5_2:7001750-7001769 | None:intergenic | 45.0% | |
| CAGAAGATTAGAGGAGGAGA+TGG | - | chr5_2:7001866-7001885 | Msa0753340:CDS | 45.0% | |
| TACAGCTGAAAGGCTTCAAG+AGG | - | chr5_2:7002010-7002029 | Msa0753340:intron | 45.0% | |
| TAGACGCAGTTCACTTGCTT+CGG | + | chr5_2:7002108-7002127 | None:intergenic | 45.0% | |
| TCAGATACAGCAGATGTTGG+TGG | - | chr5_2:7002244-7002263 | Msa0753340:intron | 45.0% | |
| TGCGTCATTGAAGAAGGAAG+CGG | - | chr5_2:7002523-7002542 | Msa0753340:intron | 45.0% | |
| CCTGAATCTCTTCTCAATGC+TGG | + | chr5_2:7002759-7002778 | None:intergenic | 45.0% | |
| ! | CCAGCATTGAGAAGAGATTC+AGG | - | chr5_2:7002756-7002775 | Msa0753340:CDS | 45.0% |
| TCAGGGCCTGATAAAGTCAA+AGG | - | chr5_2:7003061-7003080 | Msa0753340:CDS | 45.0% | |
| GGAACTTCAGAGCAGAATTG+TGG | - | chr5_2:7003130-7003149 | Msa0753340:intron | 45.0% | |
| GCCCTTCAAATTGGTTGTTC+AGG | - | chr5_2:7003386-7003405 | Msa0753340:intron | 45.0% | |
| GACCGAATTGTCGTCATTGA+AGG | - | chr5_2:7003494-7003513 | Msa0753340:intron | 45.0% | |
| TTGTCTTTCACCTTCGACCT+CGG | + | chr5_2:7003592-7003611 | None:intergenic | 45.0% | |
| GAGAAAACTCTCAGCCCTTA+TGG | + | chr5_2:7003650-7003669 | None:intergenic | 45.0% | |
| GCAGGCTCCAATATATCAAG+AGG | + | chr5_2:7003672-7003691 | None:intergenic | 45.0% | |
| TCGGTGGTTGATCAACTCGT+TGG | + | chr5_2:6998885-6998904 | None:intergenic | 50.0% | |
| ! | TCAGGTGTTACAATCAGGGG+TGG | - | chr5_2:6999588-6999607 | Msa0753340:CDS | 50.0% |
| ACAATCAGGGGTGGATGCAT+TGG | - | chr5_2:6999597-6999616 | Msa0753340:intron | 50.0% | |
| !! | GTTGGTCTTCCAATGTCACC+AGG | + | chr5_2:6999637-6999656 | None:intergenic | 50.0% |
| TATCAAAAGCTAGCGCCGTC+GGG | - | chr5_2:6999887-6999906 | Msa0753340:CDS | 50.0% | |
| GTTCACAGAAACATCCCCGA+CGG | + | chr5_2:6999905-6999924 | None:intergenic | 50.0% | |
| AGAGACATGAGAGGGCTTTG+TGG | + | chr5_2:6999947-6999966 | None:intergenic | 50.0% | |
| GATGGGAAGAGAGACATGAG+AGG | + | chr5_2:6999956-6999975 | None:intergenic | 50.0% | |
| CTCATGTCTCTCTTCCCATC+AGG | - | chr5_2:6999956-6999975 | Msa0753340:CDS | 50.0% | |
| CTGTATCGCCGTTGCTGAAT+TGG | + | chr5_2:7000366-7000385 | None:intergenic | 50.0% | |
| GGGCCATAACTGGAACAAAC+TGG | + | chr5_2:7000795-7000814 | None:intergenic | 50.0% | |
| AGCAGCATTTGGAGATTCCG+CGG | + | chr5_2:7000821-7000840 | None:intergenic | 50.0% | |
| ! | TCGTCATCTAGCTCAGAGCT+CGG | - | chr5_2:7000892-7000911 | Msa0753340:CDS | 50.0% |
| CTCAGAGCTCGGGTTAAGTA+TGG | - | chr5_2:7000903-7000922 | Msa0753340:CDS | 50.0% | |
| TGCCTCTTGGGAACTTTCCT+TGG | + | chr5_2:7000962-7000981 | None:intergenic | 50.0% | |
| !! | TTCCCAAGAGGCATCCCATT+TGG | - | chr5_2:7000969-7000988 | Msa0753340:CDS | 50.0% |
| CTCCAAATGGGATGCCTCTT+GGG | + | chr5_2:7000974-7000993 | None:intergenic | 50.0% | |
| TCTCCAAATGGGATGCCTCT+TGG | + | chr5_2:7000975-7000994 | None:intergenic | 50.0% | |
| !! | AGAGGCATCCCATTTGGAGA+TGG | - | chr5_2:7000975-7000994 | Msa0753340:CDS | 50.0% |
| AAGAGGGCAGGATCTCATGA+AGG | - | chr5_2:7001095-7001114 | Msa0753340:CDS | 50.0% | |
| CAGGTCTTTCCACAAACGCA+TGG | - | chr5_2:7001173-7001192 | Msa0753340:CDS | 50.0% | |
| ! | TGAATTGGTTCTTGCCGTGC+AGG | - | chr5_2:7001341-7001360 | Msa0753340:CDS | 50.0% |
| TCTGCTCCAACATCTCTTCC+AGG | + | chr5_2:7001368-7001387 | None:intergenic | 50.0% | |
| GCTAGAGCAAAGCCAATTGC+AGG | - | chr5_2:7001692-7001711 | Msa0753340:CDS | 50.0% | |
| AGAACTCAAGGAGCAGTCAG+AGG | - | chr5_2:7001797-7001816 | Msa0753340:CDS | 50.0% | |
| GGTCTTTCGCAATGCTTCCT+CGG | + | chr5_2:7001973-7001992 | None:intergenic | 50.0% | |
| TGCTTCGGTCAATGCTCTCA+TGG | + | chr5_2:7002093-7002112 | None:intergenic | 50.0% | |
| GGACGCAACCAACTTTCTGA+TGG | - | chr5_2:7002788-7002807 | Msa0753340:intron | 50.0% | |
| TCAGAGCAGAATTGTGGAGC+TGG | - | chr5_2:7003136-7003155 | Msa0753340:intron | 50.0% | |
| TGTGGAGCTGGAGAACAAAG+TGG | - | chr5_2:7003148-7003167 | Msa0753340:intron | 50.0% | |
| ! | CACGCGGACAATAGTCTTAG+TGG | - | chr5_2:7003465-7003484 | Msa0753340:intron | 50.0% |
| CTCAAATTTGCCGAGGTCGA+AGG | - | chr5_2:7003579-7003598 | Msa0753340:CDS | 50.0% | |
| AGCCCTTATGGACACTCTTG+AGG | + | chr5_2:7003638-7003657 | None:intergenic | 50.0% | |
| CTGCTACAGCTATACACTGC+AGG | + | chr5_2:7003690-7003709 | None:intergenic | 50.0% | |
| CTGCAGTGTATAGCTGTAGC+AGG | - | chr5_2:7003688-7003707 | Msa0753340:five_prime_UTR | 50.0% | |
| GCAGGTGTACTTTGCAACAG+TGG | - | chr5_2:7003706-7003725 | Msa0753340:five_prime_UTR | 50.0% | |
| ATCAAAAGCTAGCGCCGTCG+GGG | - | chr5_2:6999888-6999907 | Msa0753340:CDS | 55.0% | |
| ATTTGGAGATTCCGCGGCAC+GGG | + | chr5_2:7000815-7000834 | None:intergenic | 55.0% | |
| CATTTGGAGATTCCGCGGCA+CGG | + | chr5_2:7000816-7000835 | None:intergenic | 55.0% | |
| ! | CGTCATCTAGCTCAGAGCTC+GGG | - | chr5_2:7000893-7000912 | Msa0753340:CDS | 55.0% |
| TGGCATCGTCCATGCGTTTG+TGG | + | chr5_2:7001185-7001204 | None:intergenic | 55.0% | |
| CATCTCTTCCAGGTCCTGCA+CGG | + | chr5_2:7001358-7001377 | None:intergenic | 55.0% | |
| GCAGGACCTGGAAGAGATGT+TGG | - | chr5_2:7001359-7001378 | Msa0753340:CDS | 55.0% | |
| !! | CAATGCTTCCTCGGCTTGGA+TGG | + | chr5_2:7001964-7001983 | None:intergenic | 55.0% |
| TTCGCAATGCTTCCTCGGCT+TGG | + | chr5_2:7001968-7001987 | None:intergenic | 55.0% | |
| GGAGCTGGAGAACAAAGTGG+AGG | - | chr5_2:7003151-7003170 | Msa0753340:intron | 55.0% | |
| ! | CTGAACTCGCTGCTTTGGCG+AGG | - | chr5_2:7001010-7001029 | Msa0753340:CDS | 60.0% |
| GCACGTGGATGTGTCGGACA+TGG | - | chr5_2:7001032-7001051 | Msa0753340:CDS | 60.0% | |
| GCAAAGAGCCATCCAAGCCG+AGG | - | chr5_2:7001953-7001972 | Msa0753340:CDS | 60.0% | |
| TCCAGTTATGGCCCGTGCCG+CGG | - | chr5_2:7000801-7000820 | Msa0753340:CDS | 65.0% | |
| GGCGAGGCACGTGGATGTGT+CGG | - | chr5_2:7001026-7001045 | Msa0753340:CDS | 65.0% | |
| GGTTCTTGCCGTGCAGGACC+TGG | - | chr5_2:7001347-7001366 | Msa0753340:CDS | 65.0% | |
| TCCGCGGCACGGGCCATAAC+TGG | + | chr5_2:7000805-7000824 | None:intergenic | 70.0% | |
| ! | CGCTGCTTTGGCGAGGCACG+TGG | - | chr5_2:7001017-7001036 | Msa0753340:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 6998730 | 7003949 | 6998730 | ID=Msa0753340;Name=Msa0753340 |
| chr5_2 | mRNA | 6998730 | 7003949 | 6998730 | ID=Msa0753340-mRNA-1;Parent=Msa0753340;Name=Msa0753340-mRNA-1;_AED=0.04;_eAED=0.04;_QI=321|1|1|1|1|1|8|290|1064 |
| chr5_2 | exon | 6998730 | 6999271 | 6998730 | ID=Msa0753340-mRNA-1:exon:3114;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 6999477 | 6999614 | 6999477 | ID=Msa0753340-mRNA-1:exon:3113;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 6999775 | 7002024 | 6999775 | ID=Msa0753340-mRNA-1:exon:3112;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 7002265 | 7002373 | 7002265 | ID=Msa0753340-mRNA-1:exon:3111;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 7002490 | 7002533 | 7002490 | ID=Msa0753340-mRNA-1:exon:3110;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 7002674 | 7002796 | 7002674 | ID=Msa0753340-mRNA-1:exon:3109;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 7002887 | 7003087 | 7002887 | ID=Msa0753340-mRNA-1:exon:3108;Parent=Msa0753340-mRNA-1 |
| chr5_2 | exon | 7003551 | 7003949 | 7003551 | ID=Msa0753340-mRNA-1:exon:3107;Parent=Msa0753340-mRNA-1 |
| chr5_2 | five_prime_UTR | 7003629 | 7003949 | 7003629 | ID=Msa0753340-mRNA-1:five_prime_utr;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 7003551 | 7003628 | 7003551 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 7002887 | 7003087 | 7002887 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 7002674 | 7002796 | 7002674 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 7002490 | 7002533 | 7002490 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 7002265 | 7002373 | 7002265 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 6999775 | 7002024 | 6999775 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 6999477 | 6999614 | 6999477 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | CDS | 6999020 | 6999271 | 6999020 | ID=Msa0753340-mRNA-1:cds;Parent=Msa0753340-mRNA-1 |
| chr5_2 | three_prime_UTR | 6998730 | 6999019 | 6998730 | ID=Msa0753340-mRNA-1:three_prime_utr;Parent=Msa0753340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
