Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904010 | XP_003618439.2 | 94.378 | 498 | 28 | 0 | 1 | 498 | 14 | 511 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904010 | sp|Q9FLD5|ASD_ARATH | 62.584 | 449 | 158 | 5 | 1 | 442 | 15 | 460 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0614920 | Msa0904010 | 0.800753 | 1.243104e-48 | -8.615850e-47 |
| Msa0264830 | Msa0904010 | 0.800670 | 1.292606e-48 | -8.615850e-47 |
| Msa0321080 | Msa0904010 | 0.803174 | 3.953332e-49 | -8.615850e-47 |
| Msa0340340 | Msa0904010 | 0.802814 | 4.692068e-49 | -8.615850e-47 |
| Msa0490380 | Msa0904010 | 0.802936 | 4.428698e-49 | -8.615850e-47 |
| Msa0870830 | Msa0904010 | 0.818100 | 2.338246e-52 | -8.615850e-47 |
| Msa0870840 | Msa0904010 | 0.825253 | 5.184377e-54 | -8.615850e-47 |
| Msa0903990 | Msa0904010 | 0.805692 | 1.180988e-49 | -8.615850e-47 |
| Msa0904010 | Msa0935770 | 0.812682 | 3.749093e-51 | -8.615850e-47 |
| Msa0904010 | Msa0936540 | 0.826234 | 3.033695e-54 | -8.615850e-47 |
| Msa0904010 | Msa0936560 | 0.885375 | 8.584403e-72 | -8.615850e-47 |
| Msa0904010 | Msa0973520 | 0.803246 | 3.819822e-49 | -8.615850e-47 |
| Msa0904010 | Msa0973530 | 0.838202 | 3.308689e-57 | -8.615850e-47 |
| Msa0904010 | Msa0973540 | 0.836957 | 6.900952e-57 | -8.615850e-47 |
| Msa0904010 | Msa1246700 | 0.808231 | 3.428231e-50 | -8.615850e-47 |
| Msa0904010 | Msa1365270 | 0.808877 | 2.495759e-50 | -8.615850e-47 |
| Msa0904010 | Msa1376450 | 0.804198 | 2.423339e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904010 | MtrunA17_Chr6g0452391 | 94.378 | 498 | 28 | 0 | 1 | 498 | 14 | 511 | 0.0 | 904 |
| Msa0904010 | MtrunA17_Chr6g0452371 | 86.345 | 498 | 68 | 0 | 1 | 498 | 16 | 513 | 0.0 | 826 |
| Msa0904010 | MtrunA17_Chr6g0452451 | 74.286 | 490 | 106 | 4 | 2 | 478 | 17 | 499 | 0.0 | 700 |
| Msa0904010 | MtrunA17_Chr6g0452401 | 73.499 | 483 | 107 | 3 | 10 | 477 | 1 | 477 | 0.0 | 693 |
| Msa0904010 | MtrunA17_Chr6g0466811 | 67.465 | 501 | 135 | 5 | 1 | 500 | 25 | 498 | 0.0 | 654 |
| Msa0904010 | MtrunA17_Chr7g0215951 | 67.478 | 452 | 138 | 4 | 1 | 446 | 12 | 460 | 0.0 | 635 |
| Msa0904010 | MtrunA17_Chr4g0059811 | 57.980 | 495 | 190 | 8 | 1 | 480 | 17 | 508 | 0.0 | 587 |
| Msa0904010 | MtrunA17_Chr6g0452411 | 73.697 | 403 | 87 | 4 | 90 | 479 | 1 | 397 | 0.0 | 570 |
| Msa0904010 | MtrunA17_Chr1g0155131 | 58.244 | 467 | 178 | 5 | 1 | 464 | 14 | 466 | 0.0 | 565 |
| Msa0904010 | MtrunA17_Chr2g0292561 | 57.174 | 460 | 180 | 5 | 1 | 456 | 17 | 463 | 0.0 | 546 |
| Msa0904010 | MtrunA17_Chr1g0155121 | 54.286 | 455 | 192 | 5 | 1 | 445 | 12 | 460 | 4.14e-178 | 509 |
| Msa0904010 | MtrunA17_Chr6g0452361 | 80.731 | 301 | 32 | 2 | 200 | 500 | 1 | 275 | 6.29e-154 | 439 |
| Msa0904010 | MtrunA17_Chr6g0452481 | 72.327 | 318 | 70 | 4 | 179 | 495 | 2 | 302 | 2.63e-148 | 426 |
| Msa0904010 | MtrunA17_Chr4g0072491 | 43.864 | 440 | 227 | 7 | 1 | 426 | 8 | 441 | 1.14e-120 | 363 |
| Msa0904010 | MtrunA17_Chr5g0404651 | 38.398 | 487 | 256 | 9 | 2 | 475 | 22 | 477 | 1.16e-114 | 347 |
| Msa0904010 | MtrunA17_Chr2g0315921 | 40.909 | 462 | 235 | 11 | 1 | 455 | 16 | 446 | 1.94e-112 | 340 |
| Msa0904010 | MtrunA17_Chr2g0308991 | 41.204 | 432 | 236 | 9 | 1 | 426 | 7 | 426 | 3.17e-107 | 329 |
| Msa0904010 | MtrunA17_Chr8g0372701 | 39.362 | 470 | 248 | 8 | 2 | 464 | 32 | 471 | 5.29e-107 | 328 |
| Msa0904010 | MtrunA17_Chr2g0315911 | 40.773 | 466 | 233 | 13 | 1 | 459 | 18 | 447 | 8.31e-107 | 326 |
| Msa0904010 | MtrunA17_Chr2g0315981 | 39.496 | 476 | 253 | 9 | 1 | 470 | 11 | 457 | 8.39e-107 | 326 |
| Msa0904010 | MtrunA17_Chr2g0315991 | 39.208 | 505 | 244 | 15 | 1 | 497 | 17 | 466 | 9.68e-107 | 326 |
| Msa0904010 | MtrunA17_Chr2g0315971 | 40.645 | 465 | 234 | 9 | 1 | 459 | 11 | 439 | 3.11e-106 | 333 |
| Msa0904010 | MtrunA17_Chr2g0315971 | 48.582 | 282 | 117 | 5 | 165 | 446 | 450 | 703 | 1.14e-82 | 271 |
| Msa0904010 | MtrunA17_Chr2g0316041 | 41.608 | 423 | 211 | 8 | 53 | 469 | 4 | 396 | 1.05e-102 | 315 |
| Msa0904010 | MtrunA17_Chr5g0404661 | 39.323 | 473 | 239 | 12 | 4 | 456 | 36 | 480 | 3.66e-99 | 307 |
| Msa0904010 | MtrunA17_Chr2g0316021 | 37.195 | 492 | 226 | 11 | 1 | 486 | 11 | 425 | 5.14e-96 | 297 |
| Msa0904010 | MtrunA17_Chr3g0134831 | 46.026 | 302 | 145 | 5 | 147 | 447 | 4 | 288 | 3.87e-85 | 264 |
| Msa0904010 | MtrunA17_Chr7g0276031 | 33.100 | 429 | 218 | 11 | 19 | 439 | 38 | 405 | 4.49e-69 | 228 |
| Msa0904010 | MtrunA17_Chr3g0127381 | 30.435 | 437 | 242 | 12 | 1 | 426 | 11 | 396 | 3.92e-64 | 216 |
| Msa0904010 | MtrunA17_Chr8g0346371 | 30.870 | 460 | 253 | 12 | 14 | 453 | 24 | 438 | 1.99e-62 | 211 |
| Msa0904010 | MtrunA17_Chr1g0148871 | 61.481 | 135 | 47 | 3 | 313 | 445 | 2 | 133 | 1.42e-42 | 149 |
| Msa0904010 | MtrunA17_Chr6g0452351 | 54.310 | 116 | 52 | 1 | 1 | 115 | 25 | 140 | 4.93e-40 | 141 |
| Msa0904010 | MtrunA17_Chr5g0404681 | 43.182 | 132 | 65 | 1 | 123 | 254 | 31 | 152 | 7.38e-32 | 119 |
| Msa0904010 | MtrunA17_Chr5g0404671 | 45.255 | 137 | 67 | 3 | 340 | 471 | 1 | 134 | 7.74e-31 | 117 |
| Msa0904010 | MtrunA17_Chr5g0404691 | 37.714 | 175 | 82 | 4 | 274 | 447 | 2 | 150 | 5.09e-23 | 95.5 |
| Msa0904010 | MtrunA17_Chr1g0211521 | 50.926 | 108 | 51 | 2 | 373 | 479 | 5 | 111 | 2.11e-22 | 92.4 |
| Msa0904010 | MtrunA17_Chr1g0192151 | 31.088 | 193 | 100 | 6 | 203 | 386 | 177 | 345 | 2.83e-13 | 71.6 |
| Msa0904010 | MtrunA17_Chr4g0014731 | 31.088 | 193 | 100 | 6 | 203 | 386 | 178 | 346 | 3.11e-13 | 71.6 |
| Msa0904010 | MtrunA17_Chr8g0362771 | 29.379 | 177 | 92 | 6 | 209 | 377 | 252 | 403 | 1.80e-11 | 66.6 |
| Msa0904010 | MtrunA17_Chr2g0315961 | 45.333 | 75 | 37 | 2 | 373 | 447 | 1 | 71 | 8.32e-11 | 58.2 |
| Msa0904010 | MtrunA17_Chr8g0388371 | 29.050 | 179 | 104 | 6 | 209 | 379 | 419 | 582 | 9.99e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0904010 | AT5G40010.1 | 62.584 | 449 | 158 | 5 | 1 | 442 | 15 | 460 | 0.0 | 577 |
| Msa0904010 | AT3G28580.1 | 61.333 | 450 | 157 | 8 | 1 | 442 | 15 | 455 | 0.0 | 547 |
| Msa0904010 | AT3G28510.1 | 60.089 | 451 | 178 | 2 | 1 | 451 | 15 | 463 | 0.0 | 536 |
| Msa0904010 | AT3G28580.2 | 57.942 | 447 | 155 | 7 | 1 | 442 | 15 | 433 | 4.40e-175 | 501 |
| Msa0904010 | AT3G28540.2 | 58.129 | 449 | 175 | 6 | 1 | 444 | 15 | 455 | 1.28e-173 | 499 |
| Msa0904010 | AT3G28540.1 | 58.129 | 449 | 175 | 6 | 1 | 444 | 15 | 455 | 2.16e-173 | 498 |
| Msa0904010 | AT3G28610.1 | 51.064 | 470 | 181 | 8 | 1 | 450 | 10 | 450 | 7.66e-167 | 480 |
| Msa0904010 | AT3G28600.1 | 51.940 | 464 | 185 | 7 | 1 | 450 | 11 | 450 | 3.84e-165 | 476 |
| Msa0904010 | AT3G28520.1 | 54.620 | 487 | 203 | 7 | 1 | 478 | 1 | 478 | 8.59e-159 | 460 |
| Msa0904010 | AT5G40000.1 | 49.474 | 475 | 197 | 8 | 1 | 459 | 15 | 462 | 1.32e-157 | 456 |
| Msa0904010 | AT3G28600.2 | 48.276 | 464 | 163 | 7 | 1 | 450 | 11 | 411 | 6.06e-145 | 423 |
| Msa0904010 | AT3G28570.2 | 46.138 | 479 | 203 | 9 | 1 | 466 | 20 | 456 | 8.27e-144 | 421 |
| Msa0904010 | AT3G28570.1 | 46.138 | 479 | 203 | 9 | 1 | 466 | 13 | 449 | 9.18e-144 | 421 |
| Msa0904010 | AT5G57480.1 | 38.845 | 502 | 277 | 10 | 1 | 488 | 12 | 497 | 4.10e-119 | 360 |
| Msa0904010 | AT4G25835.1 | 40.129 | 466 | 266 | 7 | 1 | 462 | 12 | 468 | 5.03e-117 | 354 |
| Msa0904010 | AT3G50940.1 | 40.308 | 454 | 232 | 11 | 9 | 456 | 31 | 451 | 7.60e-112 | 339 |
| Msa0904010 | AT3G50930.1 | 38.289 | 491 | 273 | 11 | 5 | 489 | 73 | 539 | 1.37e-109 | 337 |
| Msa0904010 | AT4G30250.1 | 40.685 | 467 | 243 | 10 | 1 | 447 | 8 | 460 | 1.45e-108 | 333 |
| Msa0904010 | AT4G30250.2 | 40.685 | 467 | 243 | 10 | 1 | 447 | 10 | 462 | 1.81e-108 | 332 |
| Msa0904010 | AT2G18193.1 | 38.136 | 472 | 251 | 10 | 4 | 466 | 25 | 464 | 1.89e-102 | 316 |
| Msa0904010 | AT5G17740.1 | 36.895 | 496 | 274 | 12 | 1 | 482 | 21 | 491 | 1.62e-101 | 315 |
| Msa0904010 | AT4G05380.1 | 39.785 | 465 | 243 | 12 | 3 | 460 | 26 | 460 | 4.26e-101 | 311 |
| Msa0904010 | AT5G17760.1 | 36.640 | 494 | 258 | 10 | 4 | 472 | 24 | 487 | 3.18e-99 | 308 |
| Msa0904010 | AT5G17730.1 | 34.927 | 481 | 260 | 12 | 4 | 467 | 24 | 468 | 7.11e-97 | 301 |
| Msa0904010 | AT1G43910.1 | 37.632 | 473 | 257 | 11 | 1 | 457 | 8 | 458 | 4.90e-91 | 286 |
| Msa0904010 | AT2G18190.1 | 36.303 | 449 | 255 | 9 | 4 | 449 | 26 | 446 | 5.50e-91 | 286 |
| Msa0904010 | AT5G17750.1 | 34.928 | 418 | 211 | 8 | 4 | 411 | 24 | 390 | 2.97e-86 | 271 |
| Msa0904010 | AT2G46620.1 | 30.417 | 480 | 275 | 11 | 1 | 472 | 12 | 440 | 3.34e-71 | 235 |
| Msa0904010 | AT5G17760.2 | 36.122 | 263 | 142 | 4 | 52 | 299 | 71 | 322 | 1.55e-50 | 176 |
| Msa0904010 | AT3G28560.1 | 43.204 | 206 | 107 | 4 | 1 | 204 | 15 | 212 | 6.11e-48 | 166 |
| Msa0904010 | AT3G29800.1 | 30.390 | 385 | 202 | 11 | 94 | 473 | 77 | 400 | 2.57e-46 | 167 |
| Msa0904010 | AT4G05340.1 | 51.042 | 96 | 41 | 1 | 302 | 397 | 4 | 93 | 1.36e-23 | 95.5 |
| Msa0904010 | AT1G09100.1 | 31.606 | 193 | 99 | 6 | 203 | 386 | 177 | 345 | 7.62e-14 | 73.9 |
| Msa0904010 | AT3G05530.1 | 31.088 | 193 | 100 | 6 | 203 | 386 | 178 | 346 | 2.18e-13 | 72.4 |
Find 65 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGTAAGGTAACTCTTTC+GGG | 0.182477 | 6_2:+1446580 | Msa0904010:CDS |
| ATTTCTCATAGAAGGTTATT+TGG | 0.200148 | 6_2:-1445712 | None:intergenic |
| TGCTTAGAACAAGTGGATTT+TGG | 0.205867 | 6_2:-1445844 | None:intergenic |
| CTCTTACATCCAACATGTTT+TGG | 0.206662 | 6_2:+1446033 | Msa0904010:CDS |
| CCAACAATCCAAGCGATAAT+TGG | 0.247144 | 6_2:+1446104 | Msa0904010:CDS |
| TGAAAGTAAGGTAACTCTTT+CGG | 0.282567 | 6_2:+1446579 | Msa0904010:CDS |
| CCAATTATCGCTTGGATTGT+TGG | 0.330269 | 6_2:-1446104 | None:intergenic |
| ATCTCCTGATTTCTCATAGA+AGG | 0.330595 | 6_2:-1445720 | None:intergenic |
| TCTTGAGGAAGCAAAGAAAA+AGG | 0.342972 | 6_2:+1446930 | Msa0904010:CDS |
| TAGAAGGTTATTTGGATGTA+AGG | 0.371337 | 6_2:-1445704 | None:intergenic |
| TTGTAGCTATCAAGCTTTCA+AGG | 0.373428 | 6_2:+1446741 | Msa0904010:CDS |
| CGGGCAAAGGAAGAAGAAAA+AGG | 0.374019 | 6_2:+1446489 | Msa0904010:CDS |
| CGGAAAATCTACCATGATAT+CGG | 0.379987 | 6_2:+1446321 | Msa0904010:CDS |
| TGAACTCATCTGTGATCTCT+TGG | 0.398036 | 6_2:-1445877 | None:intergenic |
| AAATCTTCAATGATTGACTT+TGG | 0.400671 | 6_2:-1446877 | None:intergenic |
| AGTTAGCACTAAGATATGTT+TGG | 0.410357 | 6_2:-1445775 | None:intergenic |
| CCAGTTATTGAAAAGTTGTT+GGG | 0.411423 | 6_2:+1446811 | Msa0904010:CDS |
| ATAACCTTCTATGAGAAATC+AGG | 0.414579 | 6_2:+1445716 | Msa0904010:CDS |
| GCAAGTGTTTCAAAACTTGC+AGG | 0.415109 | 6_2:-1446172 | None:intergenic |
| ATCCAAGCGATAATTGGTTT+AGG | 0.418087 | 6_2:+1446110 | Msa0904010:CDS |
| AAAGAGTATTATGCTAAAGT+TGG | 0.419632 | 6_2:+1446253 | Msa0904010:CDS |
| TCCAGTTATTGAAAAGTTGT+TGG | 0.424243 | 6_2:+1446810 | Msa0904010:CDS |
| AGTTCAATGGTGTCAAAGTT+TGG | 0.425897 | 6_2:+1445894 | Msa0904010:CDS |
| AGGCTATAACTATGAAGAAT+AGG | 0.434084 | 6_2:+1446065 | Msa0904010:CDS |
| TACCTAAACCAATTATCGCT+TGG | 0.458031 | 6_2:-1446112 | None:intergenic |
| GATCTTATAAAATTCAAGAA+AGG | 0.463577 | 6_2:+1446229 | Msa0904010:CDS |
| ATGCTAAAGTTGGAAAGGCT+TGG | 0.473908 | 6_2:+1446263 | Msa0904010:CDS |
| AACTTGATCCTGCTCTCATA+AGG | 0.478108 | 6_2:+1446683 | Msa0904010:CDS |
| TTAACAAATCTACGAAGTGC+TGG | 0.478784 | 6_2:-1445647 | None:intergenic |
| ATTAACTCAAGAGGAAGAAA+AGG | 0.484336 | 6_2:+1447023 | Msa0904010:CDS |
| AAATTCTCAGCAACATCTGC+TGG | 0.493448 | 6_2:-1446850 | None:intergenic |
| ATCTTATAAAATTCAAGAAA+GGG | 0.494988 | 6_2:+1446230 | Msa0904010:CDS |
| TCATCCATGCTTAGAACAAG+TGG | 0.497876 | 6_2:-1445851 | None:intergenic |
| TCTTGAATTAACAATTGTAA+AGG | 0.499500 | 6_2:+1446378 | Msa0904010:CDS |
| CTCTCGATCTCACCGGGCAA+AGG | 0.502496 | 6_2:+1446476 | Msa0904010:CDS |
| CAAAACATGTTGGATGTAAG+AGG | 0.509559 | 6_2:-1446032 | None:intergenic |
| TTCCTTGTTCCAAAACATGT+TGG | 0.518629 | 6_2:-1446042 | None:intergenic |
| GATTGTTCTCTCGATCTCAC+CGG | 0.518830 | 6_2:+1446469 | Msa0904010:CDS |
| CGTCCCCTCCTTATGAGAGC+AGG | 0.522167 | 6_2:-1446691 | None:intergenic |
| ATTCGCAATAGCCGATATCA+TGG | 0.526093 | 6_2:-1446332 | None:intergenic |
| GAAACAAGAATTAACTCAAG+AGG | 0.536216 | 6_2:+1447014 | Msa0904010:CDS |
| TCAAGAGGAAGAAAAGGTTA+AGG | 0.538611 | 6_2:+1447029 | Msa0904010:CDS |
| ATTGTTCTCTCGATCTCACC+GGG | 0.546404 | 6_2:+1446470 | Msa0904010:CDS |
| AGAAGGTTATTTGGATGTAA+GGG | 0.546485 | 6_2:-1445703 | None:intergenic |
| TGAAAATGATTGTGTTCTTG+AGG | 0.555571 | 6_2:-1445936 | None:intergenic |
| AGCACTAAGATATGTTTGGA+TGG | 0.566183 | 6_2:-1445771 | None:intergenic |
| ACAAATCTACGAAGTGCTGG+TGG | 0.569895 | 6_2:-1445644 | None:intergenic |
| TGGGAAGAATTTCTCATACA+TGG | 0.570313 | 6_2:-1445624 | None:intergenic |
| TGATGAGAATGATGAAAAGA+AGG | 0.571153 | 6_2:+1446522 | Msa0904010:CDS |
| GTATTATGCTAAAGTTGGAA+AGG | 0.575311 | 6_2:+1446258 | Msa0904010:CDS |
| AAATCCACTTGTTCTAAGCA+TGG | 0.575420 | 6_2:+1445847 | Msa0904010:CDS |
| GAGATCACAGATGAGTTCAA+TGG | 0.581658 | 6_2:+1445881 | Msa0904010:CDS |
| GAATTTGATTCAATCTCTTG+AGG | 0.581998 | 6_2:+1446915 | Msa0904010:CDS |
| TTGATCCTGCTCTCATAAGG+AGG | 0.589263 | 6_2:+1446686 | Msa0904010:CDS |
| CAAGTGTTTCAAAACTTGCA+GGG | 0.592358 | 6_2:-1446171 | None:intergenic |
| GTTGGAAAGGCTTGGAAACG+TGG | 0.601459 | 6_2:+1446271 | Msa0904010:CDS |
| TGATCCTGCTCTCATAAGGA+GGG | 0.603026 | 6_2:+1446687 | Msa0904010:CDS |
| CAAATCTACGAAGTGCTGGT+GGG | 0.606728 | 6_2:-1445643 | None:intergenic |
| AGATGAGCAAGCTCAGCTCA+AGG | 0.617202 | 6_2:+1446981 | Msa0904010:CDS |
| TCTCATAAGGAGGGGACGAA+TGG | 0.618415 | 6_2:+1446696 | Msa0904010:CDS |
| TCAATGGTGTCAAAGTTTGG+TGG | 0.621281 | 6_2:+1445897 | Msa0904010:CDS |
| GATGGAATTTGGTCAGCATG+TGG | 0.626671 | 6_2:+1446619 | Msa0904010:CDS |
| GATCCTGCTCTCATAAGGAG+GGG | 0.639749 | 6_2:+1446688 | Msa0904010:CDS |
| TTAGGTATAGAAGCACAAAG+TGG | 0.729699 | 6_2:+1446128 | Msa0904010:CDS |
| GGTCAGCATGTGGATCAGAG+AGG | 0.739195 | 6_2:+1446629 | Msa0904010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTTATAAGATCATTT+AGG | - | chr6_2:1446225-1446244 | None:intergenic | 15.0% |
| !! | ATCTTATAAAATTCAAGAAA+GGG | + | chr6_2:1446230-1446249 | Msa0904010:CDS | 15.0% |
| !!! | TGAATTTTATAAGATCATTT+AGG | - | chr6_2:1446225-1446244 | None:intergenic | 15.0% |
| !! | ATCTTATAAAATTCAAGAAA+GGG | + | chr6_2:1446230-1446249 | Msa0904010:CDS | 15.0% |
| !! | GATCTTATAAAATTCAAGAA+AGG | + | chr6_2:1446229-1446248 | Msa0904010:CDS | 20.0% |
| !! | TCTTGAATTAACAATTGTAA+AGG | + | chr6_2:1446378-1446397 | Msa0904010:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | chr6_2:1446608-1446627 | Msa0904010:CDS | 20.0% |
| !!! | AATTTTCACAACTAATTTTG+TGG | + | chr6_2:1446657-1446676 | Msa0904010:CDS | 20.0% |
| !! | GATCTTATAAAATTCAAGAA+AGG | + | chr6_2:1446229-1446248 | Msa0904010:CDS | 20.0% |
| !! | TCTTGAATTAACAATTGTAA+AGG | + | chr6_2:1446378-1446397 | Msa0904010:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | chr6_2:1446608-1446627 | Msa0904010:CDS | 20.0% |
| !!! | AATTTTCACAACTAATTTTG+TGG | + | chr6_2:1446657-1446676 | Msa0904010:CDS | 20.0% |
| ! | ATTTCTCATAGAAGGTTATT+TGG | - | chr6_2:1445715-1445734 | None:intergenic | 25.0% |
| !!! | AAAGAGTATTATGCTAAAGT+TGG | + | chr6_2:1446253-1446272 | Msa0904010:CDS | 25.0% |
| !!! | TCTTTTTCAGCTTTCTTAAT+AGG | - | chr6_2:1446550-1446569 | None:intergenic | 25.0% |
| ! | AGAAGAGAAAAATGAAAGTA+AGG | + | chr6_2:1446567-1446586 | Msa0904010:CDS | 25.0% |
| !!! | GGTTTGTTGAATTTTATTGA+TGG | + | chr6_2:1446601-1446620 | Msa0904010:CDS | 25.0% |
| !! | AAATCTTCAATGATTGACTT+TGG | - | chr6_2:1446880-1446899 | None:intergenic | 25.0% |
| !!! | TAAGGTTGATGAAAAATTAG+AGG | + | chr6_2:1447047-1447066 | Msa0904010:CDS | 25.0% |
| ! | AAAATTAGAGGAAAAAGTGA+AGG | + | chr6_2:1447059-1447078 | Msa0904010:CDS | 25.0% |
| ! | ATTTCTCATAGAAGGTTATT+TGG | - | chr6_2:1445715-1445734 | None:intergenic | 25.0% |
| !!! | AAAGAGTATTATGCTAAAGT+TGG | + | chr6_2:1446253-1446272 | Msa0904010:CDS | 25.0% |
| !!! | TCTTTTTCAGCTTTCTTAAT+AGG | - | chr6_2:1446550-1446569 | None:intergenic | 25.0% |
| ! | AGAAGAGAAAAATGAAAGTA+AGG | + | chr6_2:1446567-1446586 | Msa0904010:CDS | 25.0% |
| !!! | GGTTTGTTGAATTTTATTGA+TGG | + | chr6_2:1446601-1446620 | Msa0904010:CDS | 25.0% |
| !! | AAATCTTCAATGATTGACTT+TGG | - | chr6_2:1446880-1446899 | None:intergenic | 25.0% |
| !!! | TAAGGTTGATGAAAAATTAG+AGG | + | chr6_2:1447047-1447066 | Msa0904010:CDS | 25.0% |
| ! | AAAATTAGAGGAAAAAGTGA+AGG | + | chr6_2:1447059-1447078 | Msa0904010:CDS | 25.0% |
| AGAAGGTTATTTGGATGTAA+GGG | - | chr6_2:1445706-1445725 | None:intergenic | 30.0% | |
| TAGAAGGTTATTTGGATGTA+AGG | - | chr6_2:1445707-1445726 | None:intergenic | 30.0% | |
| ATAACCTTCTATGAGAAATC+AGG | + | chr6_2:1445716-1445735 | Msa0904010:CDS | 30.0% | |
| AGTTAGCACTAAGATATGTT+TGG | - | chr6_2:1445778-1445797 | None:intergenic | 30.0% | |
| TGAAAATGATTGTGTTCTTG+AGG | - | chr6_2:1445939-1445958 | None:intergenic | 30.0% | |
| ! | ATCTTTTCTCATCTGACTTA+GGG | - | chr6_2:1445967-1445986 | None:intergenic | 30.0% |
| ! | AATCTTTTCTCATCTGACTT+AGG | - | chr6_2:1445968-1445987 | None:intergenic | 30.0% |
| ! | ATGTCTTTTATGGAAGGTTA+GGG | - | chr6_2:1445996-1446015 | None:intergenic | 30.0% |
| AGGCTATAACTATGAAGAAT+AGG | + | chr6_2:1446065-1446084 | Msa0904010:CDS | 30.0% | |
| !!! | AAGTTTTGAAACACTTGCTT+TGG | + | chr6_2:1446177-1446196 | Msa0904010:CDS | 30.0% |
| !!! | AGGATCTCTTCTTTCTTTTT+TGG | - | chr6_2:1446205-1446224 | None:intergenic | 30.0% |
| GTATTATGCTAAAGTTGGAA+AGG | + | chr6_2:1446258-1446277 | Msa0904010:CDS | 30.0% | |
| !! | AAACGTGGTTATCTACTTTT+TGG | + | chr6_2:1446286-1446305 | Msa0904010:CDS | 30.0% |
| TGATGAGAATGATGAAAAGA+AGG | + | chr6_2:1446522-1446541 | Msa0904010:CDS | 30.0% | |
| TGAAAGTAAGGTAACTCTTT+CGG | + | chr6_2:1446579-1446598 | Msa0904010:CDS | 30.0% | |
| TCCAGTTATTGAAAAGTTGT+TGG | + | chr6_2:1446810-1446829 | Msa0904010:CDS | 30.0% | |
| CCAGTTATTGAAAAGTTGTT+GGG | + | chr6_2:1446811-1446830 | Msa0904010:CDS | 30.0% | |
| GAATTTGATTCAATCTCTTG+AGG | + | chr6_2:1446915-1446934 | Msa0904010:CDS | 30.0% | |
| GAAACAAGAATTAACTCAAG+AGG | + | chr6_2:1447014-1447033 | Msa0904010:CDS | 30.0% | |
| ATTAACTCAAGAGGAAGAAA+AGG | + | chr6_2:1447023-1447042 | Msa0904010:CDS | 30.0% | |
| AGAAGGTTATTTGGATGTAA+GGG | - | chr6_2:1445706-1445725 | None:intergenic | 30.0% | |
| TAGAAGGTTATTTGGATGTA+AGG | - | chr6_2:1445707-1445726 | None:intergenic | 30.0% | |
| ATAACCTTCTATGAGAAATC+AGG | + | chr6_2:1445716-1445735 | Msa0904010:CDS | 30.0% | |
| AGTTAGCACTAAGATATGTT+TGG | - | chr6_2:1445778-1445797 | None:intergenic | 30.0% | |
| TGAAAATGATTGTGTTCTTG+AGG | - | chr6_2:1445939-1445958 | None:intergenic | 30.0% | |
| ! | ATCTTTTCTCATCTGACTTA+GGG | - | chr6_2:1445967-1445986 | None:intergenic | 30.0% |
| ! | AATCTTTTCTCATCTGACTT+AGG | - | chr6_2:1445968-1445987 | None:intergenic | 30.0% |
| ! | ATGTCTTTTATGGAAGGTTA+GGG | - | chr6_2:1445996-1446015 | None:intergenic | 30.0% |
| AGGCTATAACTATGAAGAAT+AGG | + | chr6_2:1446065-1446084 | Msa0904010:CDS | 30.0% | |
| !!! | AAGTTTTGAAACACTTGCTT+TGG | + | chr6_2:1446177-1446196 | Msa0904010:CDS | 30.0% |
| !!! | AGGATCTCTTCTTTCTTTTT+TGG | - | chr6_2:1446205-1446224 | None:intergenic | 30.0% |
| GTATTATGCTAAAGTTGGAA+AGG | + | chr6_2:1446258-1446277 | Msa0904010:CDS | 30.0% | |
| !! | AAACGTGGTTATCTACTTTT+TGG | + | chr6_2:1446286-1446305 | Msa0904010:CDS | 30.0% |
| TGATGAGAATGATGAAAAGA+AGG | + | chr6_2:1446522-1446541 | Msa0904010:CDS | 30.0% | |
| TGAAAGTAAGGTAACTCTTT+CGG | + | chr6_2:1446579-1446598 | Msa0904010:CDS | 30.0% | |
| TCCAGTTATTGAAAAGTTGT+TGG | + | chr6_2:1446810-1446829 | Msa0904010:CDS | 30.0% | |
| CCAGTTATTGAAAAGTTGTT+GGG | + | chr6_2:1446811-1446830 | Msa0904010:CDS | 30.0% | |
| GAATTTGATTCAATCTCTTG+AGG | + | chr6_2:1446915-1446934 | Msa0904010:CDS | 30.0% | |
| GAAACAAGAATTAACTCAAG+AGG | + | chr6_2:1447014-1447033 | Msa0904010:CDS | 30.0% | |
| ATTAACTCAAGAGGAAGAAA+AGG | + | chr6_2:1447023-1447042 | Msa0904010:CDS | 30.0% | |
| TGGGAAGAATTTCTCATACA+TGG | - | chr6_2:1445627-1445646 | None:intergenic | 35.0% | |
| TTAACAAATCTACGAAGTGC+TGG | - | chr6_2:1445650-1445669 | None:intergenic | 35.0% | |
| ATCTCCTGATTTCTCATAGA+AGG | - | chr6_2:1445723-1445742 | None:intergenic | 35.0% | |
| AGCACTAAGATATGTTTGGA+TGG | - | chr6_2:1445774-1445793 | None:intergenic | 35.0% | |
| !! | TGCTTAGAACAAGTGGATTT+TGG | - | chr6_2:1445847-1445866 | None:intergenic | 35.0% |
| ! | AAATCCACTTGTTCTAAGCA+TGG | + | chr6_2:1445847-1445866 | Msa0904010:CDS | 35.0% |
| ! | AGTTCAATGGTGTCAAAGTT+TGG | + | chr6_2:1445894-1445913 | Msa0904010:CDS | 35.0% |
| ! | GATGTCTTTTATGGAAGGTT+AGG | - | chr6_2:1445997-1446016 | None:intergenic | 35.0% |
| ! | ATCACGATGTCTTTTATGGA+AGG | - | chr6_2:1446002-1446021 | None:intergenic | 35.0% |
| ! | TGAGATCACGATGTCTTTTA+TGG | - | chr6_2:1446006-1446025 | None:intergenic | 35.0% |
| CAAAACATGTTGGATGTAAG+AGG | - | chr6_2:1446035-1446054 | None:intergenic | 35.0% | |
| ! | CTCTTACATCCAACATGTTT+TGG | + | chr6_2:1446033-1446052 | Msa0904010:CDS | 35.0% |
| !!! | ATCCAACATGTTTTGGAACA+AGG | + | chr6_2:1446040-1446059 | Msa0904010:CDS | 35.0% |
| TTCCTTGTTCCAAAACATGT+TGG | - | chr6_2:1446045-1446064 | None:intergenic | 35.0% | |
| !!! | ACATGTTTTGGAACAAGGAA+AGG | + | chr6_2:1446045-1446064 | Msa0904010:CDS | 35.0% |
| ! | ATCCAAGCGATAATTGGTTT+AGG | + | chr6_2:1446110-1446129 | Msa0904010:CDS | 35.0% |
| TACCTAAACCAATTATCGCT+TGG | - | chr6_2:1446115-1446134 | None:intergenic | 35.0% | |
| ! | TTAGGTATAGAAGCACAAAG+TGG | + | chr6_2:1446128-1446147 | Msa0904010:CDS | 35.0% |
| CAAGTGTTTCAAAACTTGCA+GGG | - | chr6_2:1446174-1446193 | None:intergenic | 35.0% | |
| !!! | TTATCTACTTTTTGGTCCTC+CGG | + | chr6_2:1446294-1446313 | Msa0904010:CDS | 35.0% |
| ! | CGATATCATGGTAGATTTTC+CGG | - | chr6_2:1446323-1446342 | None:intergenic | 35.0% |
| CGGAAAATCTACCATGATAT+CGG | + | chr6_2:1446321-1446340 | Msa0904010:CDS | 35.0% | |
| GAAAGTAAGGTAACTCTTTC+GGG | + | chr6_2:1446580-1446599 | Msa0904010:CDS | 35.0% | |
| TTGTAGCTATCAAGCTTTCA+AGG | + | chr6_2:1446741-1446760 | Msa0904010:CDS | 35.0% | |
| ! | CCCAACAACTTTTCAATAAC+TGG | - | chr6_2:1446814-1446833 | None:intergenic | 35.0% |
| TCTTGAGGAAGCAAAGAAAA+AGG | + | chr6_2:1446930-1446949 | Msa0904010:CDS | 35.0% | |
| TCAAGAGGAAGAAAAGGTTA+AGG | + | chr6_2:1447029-1447048 | Msa0904010:CDS | 35.0% | |
| TGGGAAGAATTTCTCATACA+TGG | - | chr6_2:1445627-1445646 | None:intergenic | 35.0% | |
| TTAACAAATCTACGAAGTGC+TGG | - | chr6_2:1445650-1445669 | None:intergenic | 35.0% | |
| ATCTCCTGATTTCTCATAGA+AGG | - | chr6_2:1445723-1445742 | None:intergenic | 35.0% | |
| AGCACTAAGATATGTTTGGA+TGG | - | chr6_2:1445774-1445793 | None:intergenic | 35.0% | |
| !! | TGCTTAGAACAAGTGGATTT+TGG | - | chr6_2:1445847-1445866 | None:intergenic | 35.0% |
| ! | AAATCCACTTGTTCTAAGCA+TGG | + | chr6_2:1445847-1445866 | Msa0904010:CDS | 35.0% |
| ! | AGTTCAATGGTGTCAAAGTT+TGG | + | chr6_2:1445894-1445913 | Msa0904010:CDS | 35.0% |
| ! | GATGTCTTTTATGGAAGGTT+AGG | - | chr6_2:1445997-1446016 | None:intergenic | 35.0% |
| ! | ATCACGATGTCTTTTATGGA+AGG | - | chr6_2:1446002-1446021 | None:intergenic | 35.0% |
| ! | TGAGATCACGATGTCTTTTA+TGG | - | chr6_2:1446006-1446025 | None:intergenic | 35.0% |
| CAAAACATGTTGGATGTAAG+AGG | - | chr6_2:1446035-1446054 | None:intergenic | 35.0% | |
| ! | CTCTTACATCCAACATGTTT+TGG | + | chr6_2:1446033-1446052 | Msa0904010:CDS | 35.0% |
| !!! | ATCCAACATGTTTTGGAACA+AGG | + | chr6_2:1446040-1446059 | Msa0904010:CDS | 35.0% |
| TTCCTTGTTCCAAAACATGT+TGG | - | chr6_2:1446045-1446064 | None:intergenic | 35.0% | |
| !!! | ACATGTTTTGGAACAAGGAA+AGG | + | chr6_2:1446045-1446064 | Msa0904010:CDS | 35.0% |
| ! | ATCCAAGCGATAATTGGTTT+AGG | + | chr6_2:1446110-1446129 | Msa0904010:CDS | 35.0% |
| TACCTAAACCAATTATCGCT+TGG | - | chr6_2:1446115-1446134 | None:intergenic | 35.0% | |
| ! | TTAGGTATAGAAGCACAAAG+TGG | + | chr6_2:1446128-1446147 | Msa0904010:CDS | 35.0% |
| CAAGTGTTTCAAAACTTGCA+GGG | - | chr6_2:1446174-1446193 | None:intergenic | 35.0% | |
| !!! | TTATCTACTTTTTGGTCCTC+CGG | + | chr6_2:1446294-1446313 | Msa0904010:CDS | 35.0% |
| ! | CGATATCATGGTAGATTTTC+CGG | - | chr6_2:1446323-1446342 | None:intergenic | 35.0% |
| CGGAAAATCTACCATGATAT+CGG | + | chr6_2:1446321-1446340 | Msa0904010:CDS | 35.0% | |
| GAAAGTAAGGTAACTCTTTC+GGG | + | chr6_2:1446580-1446599 | Msa0904010:CDS | 35.0% | |
| TTGTAGCTATCAAGCTTTCA+AGG | + | chr6_2:1446741-1446760 | Msa0904010:CDS | 35.0% | |
| ! | CCCAACAACTTTTCAATAAC+TGG | - | chr6_2:1446814-1446833 | None:intergenic | 35.0% |
| TCTTGAGGAAGCAAAGAAAA+AGG | + | chr6_2:1446930-1446949 | Msa0904010:CDS | 35.0% | |
| TCAAGAGGAAGAAAAGGTTA+AGG | + | chr6_2:1447029-1447048 | Msa0904010:CDS | 35.0% | |
| TCATCCATGCTTAGAACAAG+TGG | - | chr6_2:1445854-1445873 | None:intergenic | 40.0% | |
| TGAACTCATCTGTGATCTCT+TGG | - | chr6_2:1445880-1445899 | None:intergenic | 40.0% | |
| GAGATCACAGATGAGTTCAA+TGG | + | chr6_2:1445881-1445900 | Msa0904010:CDS | 40.0% | |
| ! | TCAATGGTGTCAAAGTTTGG+TGG | + | chr6_2:1445897-1445916 | Msa0904010:CDS | 40.0% |
| CCAATTATCGCTTGGATTGT+TGG | - | chr6_2:1446107-1446126 | None:intergenic | 40.0% | |
| CCAACAATCCAAGCGATAAT+TGG | + | chr6_2:1446104-1446123 | Msa0904010:CDS | 40.0% | |
| GCAAGTGTTTCAAAACTTGC+AGG | - | chr6_2:1446175-1446194 | None:intergenic | 40.0% | |
| ATGCTAAAGTTGGAAAGGCT+TGG | + | chr6_2:1446263-1446282 | Msa0904010:CDS | 40.0% | |
| !!! | TATCTACTTTTTGGTCCTCC+GGG | + | chr6_2:1446295-1446314 | Msa0904010:CDS | 40.0% |
| ATTCGCAATAGCCGATATCA+TGG | - | chr6_2:1446335-1446354 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTCTTCCTTTGCC+CGG | - | chr6_2:1446491-1446510 | None:intergenic | 40.0% |
| AACTTGATCCTGCTCTCATA+AGG | + | chr6_2:1446683-1446702 | Msa0904010:CDS | 40.0% | |
| AAATTCTCAGCAACATCTGC+TGG | - | chr6_2:1446853-1446872 | None:intergenic | 40.0% | |
| GGAAGCAAAGAAAAAGGATG+AGG | + | chr6_2:1446936-1446955 | Msa0904010:CDS | 40.0% | |
| AGCAAAGAAAAAGGATGAGG+AGG | + | chr6_2:1446939-1446958 | Msa0904010:CDS | 40.0% | |
| GAGGAAAAAGTGAAGGAGAA+TGG | + | chr6_2:1447066-1447085 | Msa0904010:CDS | 40.0% | |
| TCATCCATGCTTAGAACAAG+TGG | - | chr6_2:1445854-1445873 | None:intergenic | 40.0% | |
| TGAACTCATCTGTGATCTCT+TGG | - | chr6_2:1445880-1445899 | None:intergenic | 40.0% | |
| GAGATCACAGATGAGTTCAA+TGG | + | chr6_2:1445881-1445900 | Msa0904010:CDS | 40.0% | |
| ! | TCAATGGTGTCAAAGTTTGG+TGG | + | chr6_2:1445897-1445916 | Msa0904010:CDS | 40.0% |
| CCAATTATCGCTTGGATTGT+TGG | - | chr6_2:1446107-1446126 | None:intergenic | 40.0% | |
| CCAACAATCCAAGCGATAAT+TGG | + | chr6_2:1446104-1446123 | Msa0904010:CDS | 40.0% | |
| GCAAGTGTTTCAAAACTTGC+AGG | - | chr6_2:1446175-1446194 | None:intergenic | 40.0% | |
| ATGCTAAAGTTGGAAAGGCT+TGG | + | chr6_2:1446263-1446282 | Msa0904010:CDS | 40.0% | |
| !!! | TATCTACTTTTTGGTCCTCC+GGG | + | chr6_2:1446295-1446314 | Msa0904010:CDS | 40.0% |
| ATTCGCAATAGCCGATATCA+TGG | - | chr6_2:1446335-1446354 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTCTTCCTTTGCC+CGG | - | chr6_2:1446491-1446510 | None:intergenic | 40.0% |
| AACTTGATCCTGCTCTCATA+AGG | + | chr6_2:1446683-1446702 | Msa0904010:CDS | 40.0% | |
| AAATTCTCAGCAACATCTGC+TGG | - | chr6_2:1446853-1446872 | None:intergenic | 40.0% | |
| GGAAGCAAAGAAAAAGGATG+AGG | + | chr6_2:1446936-1446955 | Msa0904010:CDS | 40.0% | |
| AGCAAAGAAAAAGGATGAGG+AGG | + | chr6_2:1446939-1446958 | Msa0904010:CDS | 40.0% | |
| GAGGAAAAAGTGAAGGAGAA+TGG | + | chr6_2:1447066-1447085 | Msa0904010:CDS | 40.0% | |
| !! | CAAATCTACGAAGTGCTGGT+GGG | - | chr6_2:1445646-1445665 | None:intergenic | 45.0% |
| !! | ACAAATCTACGAAGTGCTGG+TGG | - | chr6_2:1445647-1445666 | None:intergenic | 45.0% |
| ! | ATGGTAGATTTTCCGGTTCC+CGG | - | chr6_2:1446316-1446335 | None:intergenic | 45.0% |
| GATTGTTCTCTCGATCTCAC+CGG | + | chr6_2:1446469-1446488 | Msa0904010:CDS | 45.0% | |
| ATTGTTCTCTCGATCTCACC+GGG | + | chr6_2:1446470-1446489 | Msa0904010:CDS | 45.0% | |
| CGGGCAAAGGAAGAAGAAAA+AGG | + | chr6_2:1446489-1446508 | Msa0904010:CDS | 45.0% | |
| GATGGAATTTGGTCAGCATG+TGG | + | chr6_2:1446619-1446638 | Msa0904010:CDS | 45.0% | |
| TTGATCCTGCTCTCATAAGG+AGG | + | chr6_2:1446686-1446705 | Msa0904010:CDS | 45.0% | |
| TGATCCTGCTCTCATAAGGA+GGG | + | chr6_2:1446687-1446706 | Msa0904010:CDS | 45.0% | |
| !! | CAAATCTACGAAGTGCTGGT+GGG | - | chr6_2:1445646-1445665 | None:intergenic | 45.0% |
| !! | ACAAATCTACGAAGTGCTGG+TGG | - | chr6_2:1445647-1445666 | None:intergenic | 45.0% |
| ! | ATGGTAGATTTTCCGGTTCC+CGG | - | chr6_2:1446316-1446335 | None:intergenic | 45.0% |
| GATTGTTCTCTCGATCTCAC+CGG | + | chr6_2:1446469-1446488 | Msa0904010:CDS | 45.0% | |
| ATTGTTCTCTCGATCTCACC+GGG | + | chr6_2:1446470-1446489 | Msa0904010:CDS | 45.0% | |
| CGGGCAAAGGAAGAAGAAAA+AGG | + | chr6_2:1446489-1446508 | Msa0904010:CDS | 45.0% | |
| GATGGAATTTGGTCAGCATG+TGG | + | chr6_2:1446619-1446638 | Msa0904010:CDS | 45.0% | |
| TTGATCCTGCTCTCATAAGG+AGG | + | chr6_2:1446686-1446705 | Msa0904010:CDS | 45.0% | |
| TGATCCTGCTCTCATAAGGA+GGG | + | chr6_2:1446687-1446706 | Msa0904010:CDS | 45.0% | |
| GTTGGAAAGGCTTGGAAACG+TGG | + | chr6_2:1446271-1446290 | Msa0904010:CDS | 50.0% | |
| GATCCTGCTCTCATAAGGAG+GGG | + | chr6_2:1446688-1446707 | Msa0904010:CDS | 50.0% | |
| TCTCATAAGGAGGGGACGAA+TGG | + | chr6_2:1446696-1446715 | Msa0904010:CDS | 50.0% | |
| AGATGAGCAAGCTCAGCTCA+AGG | + | chr6_2:1446981-1447000 | Msa0904010:CDS | 50.0% | |
| GTTGGAAAGGCTTGGAAACG+TGG | + | chr6_2:1446271-1446290 | Msa0904010:CDS | 50.0% | |
| GATCCTGCTCTCATAAGGAG+GGG | + | chr6_2:1446688-1446707 | Msa0904010:CDS | 50.0% | |
| TCTCATAAGGAGGGGACGAA+TGG | + | chr6_2:1446696-1446715 | Msa0904010:CDS | 50.0% | |
| AGATGAGCAAGCTCAGCTCA+AGG | + | chr6_2:1446981-1447000 | Msa0904010:CDS | 50.0% | |
| !! | CTTTTTGGTCCTCCGGGAAC+CGG | + | chr6_2:1446301-1446320 | Msa0904010:CDS | 55.0% |
| ! | GTAGATTTTCCGGTTCCCGG+AGG | - | chr6_2:1446313-1446332 | None:intergenic | 55.0% |
| GGTCAGCATGTGGATCAGAG+AGG | + | chr6_2:1446629-1446648 | Msa0904010:CDS | 55.0% | |
| !! | CTTTTTGGTCCTCCGGGAAC+CGG | + | chr6_2:1446301-1446320 | Msa0904010:CDS | 55.0% |
| ! | GTAGATTTTCCGGTTCCCGG+AGG | - | chr6_2:1446313-1446332 | None:intergenic | 55.0% |
| GGTCAGCATGTGGATCAGAG+AGG | + | chr6_2:1446629-1446648 | Msa0904010:CDS | 55.0% | |
| CTCTCGATCTCACCGGGCAA+AGG | + | chr6_2:1446476-1446495 | Msa0904010:CDS | 60.0% | |
| CGTCCCCTCCTTATGAGAGC+AGG | - | chr6_2:1446694-1446713 | None:intergenic | 60.0% | |
| CTCTCGATCTCACCGGGCAA+AGG | + | chr6_2:1446476-1446495 | Msa0904010:CDS | 60.0% | |
| CGTCCCCTCCTTATGAGAGC+AGG | - | chr6_2:1446694-1446713 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 1445599 | 1447101 | 1445599 | ID=Msa0904010;Name=Msa0904010 |
| chr6_2 | mRNA | 1445599 | 1447101 | 1445599 | ID=Msa0904010-mRNA-1;Parent=Msa0904010;Name=Msa0904010-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|500 |
| chr6_2 | exon | 1445599 | 1447101 | 1445599 | ID=Msa0904010-mRNA-1:exon:548;Parent=Msa0904010-mRNA-1 |
| chr6_2 | CDS | 1445599 | 1447101 | 1445599 | ID=Msa0904010-mRNA-1:cds;Parent=Msa0904010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
