Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936560 | XP_003618439.2 | 94.129 | 511 | 30 | 0 | 1 | 511 | 1 | 511 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936560 | sp|Q9FLD5|ASD_ARATH | 61.739 | 460 | 166 | 5 | 3 | 455 | 4 | 460 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0419910 | Msa0936560 | 0.810101 | 1.362696e-50 | -8.615850e-47 |
| Msa0243480 | Msa0936560 | 0.805522 | 1.281989e-49 | -8.615850e-47 |
| Msa0321080 | Msa0936560 | 0.824406 | 8.213239e-54 | -8.615850e-47 |
| Msa0486690 | Msa0936560 | 0.800587 | 1.344085e-48 | -8.615850e-47 |
| Msa0490380 | Msa0936560 | 0.825491 | 4.553577e-54 | -8.615850e-47 |
| Msa0870830 | Msa0936560 | 0.842896 | 1.954204e-58 | -8.615850e-47 |
| Msa0870840 | Msa0936560 | 0.908251 | 2.097571e-81 | -8.615850e-47 |
| Msa0903990 | Msa0936560 | 0.813380 | 2.635841e-51 | -8.615850e-47 |
| Msa0904010 | Msa0936560 | 0.885375 | 8.584403e-72 | -8.615850e-47 |
| Msa0936530 | Msa0936560 | 0.863427 | 2.508547e-64 | -8.615850e-47 |
| Msa0936540 | Msa0936560 | 0.906098 | 2.131984e-80 | -8.615850e-47 |
| Msa0936550 | Msa0936560 | 0.840924 | 6.487542e-58 | -8.615850e-47 |
| Msa0936560 | Msa0973520 | 0.861539 | 9.558936e-64 | -8.615850e-47 |
| Msa0936560 | Msa0973530 | 0.881165 | 3.011184e-70 | -8.615850e-47 |
| Msa0936560 | Msa0973540 | 0.906280 | 1.756427e-80 | -8.615850e-47 |
| Msa0936560 | Msa1292990 | 0.803809 | 2.919327e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936560 | MtrunA17_Chr6g0452391 | 94.129 | 511 | 30 | 0 | 1 | 511 | 1 | 511 | 0.0 | 924 |
| Msa0936560 | MtrunA17_Chr6g0452371 | 86.301 | 511 | 70 | 0 | 1 | 511 | 3 | 513 | 0.0 | 847 |
| Msa0936560 | MtrunA17_Chr6g0452451 | 75.000 | 504 | 106 | 4 | 1 | 491 | 3 | 499 | 0.0 | 723 |
| Msa0936560 | MtrunA17_Chr6g0452401 | 74.120 | 483 | 104 | 3 | 23 | 490 | 1 | 477 | 0.0 | 695 |
| Msa0936560 | MtrunA17_Chr6g0466811 | 66.931 | 505 | 139 | 5 | 10 | 513 | 21 | 498 | 0.0 | 650 |
| Msa0936560 | MtrunA17_Chr7g0215951 | 67.171 | 463 | 143 | 4 | 3 | 459 | 1 | 460 | 0.0 | 650 |
| Msa0936560 | MtrunA17_Chr4g0059811 | 57.341 | 504 | 197 | 8 | 5 | 493 | 8 | 508 | 0.0 | 592 |
| Msa0936560 | MtrunA17_Chr1g0155131 | 57.500 | 480 | 187 | 5 | 1 | 477 | 1 | 466 | 0.0 | 575 |
| Msa0936560 | MtrunA17_Chr6g0452411 | 74.194 | 403 | 85 | 4 | 103 | 492 | 1 | 397 | 0.0 | 572 |
| Msa0936560 | MtrunA17_Chr2g0292561 | 56.716 | 469 | 186 | 5 | 5 | 469 | 8 | 463 | 0.0 | 555 |
| Msa0936560 | MtrunA17_Chr1g0155121 | 54.526 | 464 | 195 | 5 | 5 | 458 | 3 | 460 | 0.0 | 520 |
| Msa0936560 | MtrunA17_Chr6g0452361 | 80.066 | 301 | 34 | 2 | 213 | 513 | 1 | 275 | 2.64e-152 | 436 |
| Msa0936560 | MtrunA17_Chr6g0452481 | 72.013 | 318 | 71 | 4 | 192 | 508 | 2 | 302 | 4.99e-147 | 424 |
| Msa0936560 | MtrunA17_Chr4g0072491 | 43.596 | 445 | 235 | 6 | 5 | 439 | 3 | 441 | 1.02e-122 | 369 |
| Msa0936560 | MtrunA17_Chr5g0404651 | 37.980 | 495 | 265 | 8 | 6 | 488 | 13 | 477 | 4.65e-117 | 354 |
| Msa0936560 | MtrunA17_Chr2g0315921 | 40.605 | 463 | 239 | 10 | 12 | 468 | 14 | 446 | 2.00e-111 | 338 |
| Msa0936560 | MtrunA17_Chr8g0372701 | 39.457 | 479 | 253 | 8 | 6 | 477 | 23 | 471 | 2.25e-109 | 334 |
| Msa0936560 | MtrunA17_Chr2g0315991 | 39.293 | 509 | 246 | 15 | 10 | 510 | 13 | 466 | 4.40e-107 | 327 |
| Msa0936560 | MtrunA17_Chr2g0315971 | 40.812 | 468 | 237 | 9 | 10 | 472 | 7 | 439 | 4.47e-107 | 335 |
| Msa0936560 | MtrunA17_Chr2g0315971 | 48.239 | 284 | 115 | 5 | 178 | 459 | 450 | 703 | 1.90e-82 | 271 |
| Msa0936560 | MtrunA17_Chr2g0315911 | 40.812 | 468 | 234 | 13 | 12 | 472 | 16 | 447 | 5.68e-107 | 327 |
| Msa0936560 | MtrunA17_Chr2g0308991 | 41.014 | 434 | 238 | 9 | 12 | 439 | 5 | 426 | 7.50e-107 | 328 |
| Msa0936560 | MtrunA17_Chr2g0315981 | 38.622 | 479 | 261 | 8 | 10 | 483 | 7 | 457 | 8.39e-106 | 323 |
| Msa0936560 | MtrunA17_Chr2g0316041 | 41.647 | 425 | 208 | 9 | 66 | 482 | 4 | 396 | 2.09e-102 | 314 |
| Msa0936560 | MtrunA17_Chr5g0404661 | 39.798 | 495 | 236 | 15 | 7 | 469 | 16 | 480 | 9.68e-101 | 311 |
| Msa0936560 | MtrunA17_Chr2g0316021 | 37.298 | 496 | 228 | 11 | 10 | 499 | 7 | 425 | 2.23e-96 | 298 |
| Msa0936560 | MtrunA17_Chr3g0134831 | 45.695 | 302 | 146 | 5 | 160 | 460 | 4 | 288 | 4.95e-85 | 265 |
| Msa0936560 | MtrunA17_Chr7g0276031 | 33.333 | 411 | 210 | 9 | 32 | 439 | 38 | 387 | 2.07e-69 | 229 |
| Msa0936560 | MtrunA17_Chr3g0127381 | 30.493 | 446 | 247 | 13 | 6 | 439 | 2 | 396 | 4.02e-65 | 219 |
| Msa0936560 | MtrunA17_Chr8g0346371 | 32.771 | 415 | 229 | 10 | 27 | 436 | 24 | 393 | 2.81e-63 | 214 |
| Msa0936560 | MtrunA17_Chr1g0148871 | 60.741 | 135 | 48 | 3 | 326 | 458 | 2 | 133 | 2.30e-42 | 149 |
| Msa0936560 | MtrunA17_Chr6g0452351 | 55.000 | 120 | 53 | 1 | 10 | 128 | 21 | 140 | 2.08e-41 | 145 |
| Msa0936560 | MtrunA17_Chr5g0404681 | 43.182 | 132 | 65 | 1 | 136 | 267 | 31 | 152 | 3.89e-32 | 120 |
| Msa0936560 | MtrunA17_Chr5g0404671 | 44.526 | 137 | 68 | 3 | 353 | 484 | 1 | 134 | 1.65e-30 | 116 |
| Msa0936560 | MtrunA17_Chr5g0404691 | 37.143 | 175 | 83 | 4 | 287 | 460 | 2 | 150 | 9.10e-23 | 94.7 |
| Msa0936560 | MtrunA17_Chr1g0211521 | 50.000 | 108 | 52 | 2 | 386 | 492 | 5 | 111 | 2.97e-22 | 92.0 |
| Msa0936560 | MtrunA17_Chr1g0192151 | 33.333 | 177 | 85 | 6 | 232 | 399 | 193 | 345 | 1.29e-13 | 72.8 |
| Msa0936560 | MtrunA17_Chr4g0014731 | 33.333 | 177 | 85 | 6 | 232 | 399 | 194 | 346 | 1.39e-13 | 72.8 |
| Msa0936560 | MtrunA17_Chr7g0260601 | 29.534 | 193 | 105 | 7 | 208 | 392 | 242 | 411 | 9.84e-13 | 70.9 |
| Msa0936560 | MtrunA17_Chr8g0362771 | 28.502 | 207 | 106 | 7 | 222 | 411 | 252 | 433 | 1.76e-11 | 67.0 |
| Msa0936560 | MtrunA17_Chr8g0388371 | 29.050 | 179 | 104 | 6 | 222 | 392 | 419 | 582 | 8.93e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936560 | AT5G40010.1 | 61.739 | 460 | 166 | 5 | 3 | 455 | 4 | 460 | 0.0 | 588 |
| Msa0936560 | AT3G28580.1 | 60.304 | 461 | 166 | 8 | 3 | 455 | 4 | 455 | 0.0 | 557 |
| Msa0936560 | AT3G28510.1 | 59.436 | 461 | 185 | 2 | 4 | 464 | 5 | 463 | 0.0 | 543 |
| Msa0936560 | AT3G28580.2 | 56.987 | 458 | 164 | 7 | 3 | 455 | 4 | 433 | 4.54e-179 | 512 |
| Msa0936560 | AT3G28540.2 | 57.081 | 459 | 184 | 6 | 4 | 457 | 5 | 455 | 4.20e-174 | 500 |
| Msa0936560 | AT3G28540.1 | 57.081 | 459 | 184 | 6 | 4 | 457 | 5 | 455 | 4.49e-174 | 500 |
| Msa0936560 | AT3G28610.1 | 51.266 | 474 | 182 | 8 | 10 | 463 | 6 | 450 | 1.51e-168 | 485 |
| Msa0936560 | AT3G28600.1 | 51.702 | 470 | 189 | 7 | 8 | 463 | 5 | 450 | 4.20e-167 | 481 |
| Msa0936560 | AT5G40000.1 | 49.180 | 488 | 205 | 8 | 1 | 472 | 2 | 462 | 3.46e-161 | 466 |
| Msa0936560 | AT3G28520.1 | 54.415 | 487 | 204 | 7 | 14 | 491 | 1 | 478 | 5.96e-158 | 458 |
| Msa0936560 | AT3G28600.2 | 48.085 | 470 | 167 | 7 | 8 | 463 | 5 | 411 | 7.27e-147 | 428 |
| Msa0936560 | AT3G28570.1 | 45.979 | 485 | 207 | 9 | 8 | 479 | 7 | 449 | 4.84e-144 | 422 |
| Msa0936560 | AT3G28570.2 | 45.979 | 485 | 207 | 9 | 8 | 479 | 14 | 456 | 7.59e-144 | 421 |
| Msa0936560 | AT5G57480.1 | 38.943 | 511 | 282 | 10 | 5 | 501 | 3 | 497 | 1.59e-122 | 369 |
| Msa0936560 | AT4G25835.1 | 40.211 | 475 | 271 | 7 | 5 | 475 | 3 | 468 | 1.32e-120 | 363 |
| Msa0936560 | AT3G50940.1 | 40.088 | 454 | 233 | 10 | 22 | 469 | 31 | 451 | 1.23e-111 | 339 |
| Msa0936560 | AT4G30250.2 | 39.916 | 476 | 256 | 9 | 1 | 460 | 1 | 462 | 2.24e-111 | 340 |
| Msa0936560 | AT4G30250.1 | 39.873 | 474 | 255 | 9 | 3 | 460 | 1 | 460 | 6.41e-111 | 339 |
| Msa0936560 | AT3G50930.1 | 38.493 | 491 | 272 | 11 | 18 | 502 | 73 | 539 | 1.07e-109 | 338 |
| Msa0936560 | AT5G17740.1 | 36.561 | 506 | 282 | 12 | 4 | 495 | 11 | 491 | 1.01e-102 | 318 |
| Msa0936560 | AT2G18193.1 | 37.657 | 478 | 257 | 10 | 11 | 479 | 19 | 464 | 1.01e-102 | 317 |
| Msa0936560 | AT4G05380.1 | 39.040 | 479 | 253 | 13 | 2 | 473 | 14 | 460 | 2.57e-102 | 315 |
| Msa0936560 | AT5G17760.1 | 36.040 | 505 | 268 | 10 | 6 | 485 | 13 | 487 | 2.53e-100 | 311 |
| Msa0936560 | AT5G17730.1 | 34.694 | 490 | 267 | 12 | 8 | 480 | 15 | 468 | 1.09e-97 | 303 |
| Msa0936560 | AT2G18190.1 | 35.652 | 460 | 265 | 9 | 6 | 462 | 15 | 446 | 3.44e-92 | 290 |
| Msa0936560 | AT1G43910.1 | 37.578 | 479 | 261 | 11 | 8 | 470 | 2 | 458 | 6.81e-92 | 289 |
| Msa0936560 | AT5G17750.1 | 34.732 | 429 | 219 | 8 | 6 | 424 | 13 | 390 | 1.15e-87 | 275 |
| Msa0936560 | AT2G46620.1 | 30.346 | 491 | 283 | 11 | 3 | 485 | 1 | 440 | 5.01e-73 | 240 |
| Msa0936560 | AT5G17760.2 | 32.298 | 322 | 191 | 5 | 6 | 312 | 13 | 322 | 6.74e-52 | 180 |
| Msa0936560 | AT3G28560.1 | 43.519 | 216 | 112 | 4 | 4 | 217 | 5 | 212 | 2.67e-51 | 176 |
| Msa0936560 | AT3G29800.1 | 29.923 | 391 | 208 | 11 | 101 | 486 | 71 | 400 | 2.57e-46 | 167 |
| Msa0936560 | AT4G05340.1 | 51.042 | 96 | 41 | 1 | 315 | 410 | 4 | 93 | 1.60e-23 | 95.1 |
| Msa0936560 | AT1G09100.1 | 33.898 | 177 | 84 | 6 | 232 | 399 | 193 | 345 | 2.87e-14 | 75.1 |
| Msa0936560 | AT3G05530.1 | 31.606 | 193 | 99 | 6 | 216 | 399 | 178 | 346 | 1.18e-13 | 73.6 |
Find 72 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGTGGTTATCTACTTTA+TGG | 0.116491 | 6_3:+7362551 | Msa0936560:CDS |
| GAAAGTAAGGTAACTCTTTC+GGG | 0.182477 | 6_3:+7362845 | Msa0936560:CDS |
| ATTTCTCATAGAAGGTTATT+TGG | 0.200148 | 6_3:-7361977 | None:intergenic |
| TGCTTAGAACAAGTGGATTT+TGG | 0.205867 | 6_3:-7362109 | None:intergenic |
| CTCTTACATCCAACATGTTT+TGG | 0.206662 | 6_3:+7362298 | Msa0936560:CDS |
| CTAACAATCCAAGCAATAAT+TGG | 0.236698 | 6_3:+7362369 | Msa0936560:CDS |
| TGAATTTCATAAGATCATTT+AGG | 0.261836 | 6_3:-7362487 | None:intergenic |
| TGAAAGTAAGGTAACTCTTT+CGG | 0.282567 | 6_3:+7362844 | Msa0936560:CDS |
| ATCCAAGCAATAATTGGTTT+TGG | 0.294628 | 6_3:+7362375 | Msa0936560:CDS |
| ATCTCCTGATTTCTCATAGA+AGG | 0.330595 | 6_3:-7361985 | None:intergenic |
| TCTTGAGGAAGCAAAGAAAA+AGG | 0.342972 | 6_3:+7363195 | Msa0936560:CDS |
| TAGAAGGTTATTTGGATGTA+AGG | 0.371337 | 6_3:-7361969 | None:intergenic |
| TTGTAGCTATCAAGCTTTCA+AGG | 0.373428 | 6_3:+7363006 | Msa0936560:CDS |
| CGGGCAAAGGAAGAAGAAAA+AGG | 0.374019 | 6_3:+7362754 | Msa0936560:CDS |
| GTCAAACCTAGGCTCAATAA+TGG | 0.388651 | 6_3:+7361845 | Msa0936560:CDS |
| TCTTGAATTAACAATTGTTA+AGG | 0.391990 | 6_3:+7362643 | Msa0936560:CDS |
| TGAACTCATCTGTGATCTCT+TGG | 0.398036 | 6_3:-7362142 | None:intergenic |
| AGATGGGAATTGGTGAAATA+TGG | 0.401989 | 6_3:+7361823 | None:intergenic |
| ATATCATAAGAGATGGGAAT+TGG | 0.405499 | 6_3:+7361813 | None:intergenic |
| AGTTAGCACTAAGATATGTT+TGG | 0.410357 | 6_3:-7362040 | None:intergenic |
| CCAGTTATTGAAAAGTTGTT+GGG | 0.411423 | 6_3:+7363076 | Msa0936560:CDS |
| TACCAAAACCAATTATTGCT+TGG | 0.414206 | 6_3:-7362377 | None:intergenic |
| ATAACCTTCTATGAGAAATC+AGG | 0.414579 | 6_3:+7361981 | Msa0936560:CDS |
| AAATCTTCAGTGATTGACTT+TGG | 0.418717 | 6_3:-7363142 | None:intergenic |
| CTTTATGGACCTCCAGGAAC+TGG | 0.419515 | 6_3:+7362566 | Msa0936560:CDS |
| AAAGAGTATTATGCTAAAGT+TGG | 0.419632 | 6_3:+7362518 | Msa0936560:CDS |
| TCCAGTTATTGAAAAGTTGT+TGG | 0.424243 | 6_3:+7363075 | Msa0936560:CDS |
| AGTTCAATGGTGTCAAAGTT+TGG | 0.425897 | 6_3:+7362159 | Msa0936560:CDS |
| GCAAGTGTTTCAAAACTTGC+AGG | 0.428195 | 6_3:-7362437 | None:intergenic |
| AGGCTATAACAATGAAGAAT+AGG | 0.432830 | 6_3:+7362330 | Msa0936560:CDS |
| ATGCTAAAGTTGGAAAGGCT+TGG | 0.473908 | 6_3:+7362528 | Msa0936560:CDS |
| AACTTGATCCTGCTCTCATA+AGG | 0.478108 | 6_3:+7362948 | Msa0936560:CDS |
| TTAACAAATCTACGAAGTGC+TGG | 0.478784 | 6_3:-7361912 | None:intergenic |
| ATTAACTCAAGAGGAAGAAA+AGG | 0.484336 | 6_3:+7363288 | Msa0936560:CDS |
| GATCTTATGAAATTCAAGAA+AGG | 0.493274 | 6_3:+7362494 | Msa0936560:CDS |
| TCATCCATGCTTAGAACAAG+TGG | 0.497876 | 6_3:-7362116 | None:intergenic |
| ATCTTATGAAATTCAAGAAA+GGG | 0.499051 | 6_3:+7362495 | Msa0936560:CDS |
| CTCTCGATCTCACCGGGCAA+AGG | 0.502496 | 6_3:+7362741 | Msa0936560:CDS |
| CAAAACATGTTGGATGTAAG+AGG | 0.509559 | 6_3:-7362297 | None:intergenic |
| TTCCTTGTTCCAAAACATGT+TGG | 0.518629 | 6_3:-7362307 | None:intergenic |
| GATTGTTCTCTCGATCTCAC+CGG | 0.518830 | 6_3:+7362734 | Msa0936560:CDS |
| CGTCCCCTCCTTATGAGAGC+AGG | 0.522167 | 6_3:-7362956 | None:intergenic |
| TATCTACTTTATGGACCTCC+AGG | 0.534952 | 6_3:+7362560 | Msa0936560:CDS |
| GAAACAAGAATTAACTCAAG+AGG | 0.536216 | 6_3:+7363279 | Msa0936560:CDS |
| TCAAGAGGAAGAAAAGGTTA+AGG | 0.538611 | 6_3:+7363294 | Msa0936560:CDS |
| ATTGTTCTCTCGATCTCACC+GGG | 0.546404 | 6_3:+7362735 | Msa0936560:CDS |
| AGAAGGTTATTTGGATGTAA+GGG | 0.546485 | 6_3:-7361968 | None:intergenic |
| TGAAAATGATTGTGTTCTTG+AGG | 0.555571 | 6_3:-7362201 | None:intergenic |
| AAATTCTCAGCAACATCAGC+CGG | 0.561858 | 6_3:-7363115 | None:intergenic |
| AGCACTAAGATATGTTTGGA+TGG | 0.566183 | 6_3:-7362036 | None:intergenic |
| ACAAATCTACGAAGTGCTGG+TGG | 0.569895 | 6_3:-7361909 | None:intergenic |
| TGGGAAGAATTTCTCATACA+TGG | 0.570313 | 6_3:-7361889 | None:intergenic |
| TGATGAGAATGATGAAAAGA+AGG | 0.571153 | 6_3:+7362787 | Msa0936560:CDS |
| GTATTATGCTAAAGTTGGAA+AGG | 0.575311 | 6_3:+7362523 | Msa0936560:CDS |
| AAATCCACTTGTTCTAAGCA+TGG | 0.575420 | 6_3:+7362112 | Msa0936560:CDS |
| GAGATCACAGATGAGTTCAA+TGG | 0.581658 | 6_3:+7362146 | Msa0936560:CDS |
| GAATTTGATTCAATCTCTTG+AGG | 0.581998 | 6_3:+7363180 | Msa0936560:CDS |
| TGCTAGCCATTATTGAGCCT+AGG | 0.582090 | 6_3:-7361851 | None:intergenic |
| TTGATCCTGCTCTCATAAGG+AGG | 0.589263 | 6_3:+7362951 | Msa0936560:CDS |
| GTTGGAAAGGCTTGGAAACG+TGG | 0.601459 | 6_3:+7362536 | Msa0936560:CDS |
| TGATCCTGCTCTCATAAGGA+GGG | 0.603026 | 6_3:+7362952 | Msa0936560:CDS |
| CAAATCTACGAAGTGCTGGT+GGG | 0.606728 | 6_3:-7361908 | None:intergenic |
| GGGAGAGACTAATATGTCAC+CGG | 0.608628 | 6_3:+7363096 | Msa0936560:CDS |
| AGACGAGCAAGCTCAGCTCA+AGG | 0.609043 | 6_3:+7363246 | Msa0936560:CDS |
| TCTCATAAGGAGGGGACGAA+TGG | 0.618415 | 6_3:+7362961 | Msa0936560:CDS |
| GGTGAAATATGGTCAAACCT+AGG | 0.619766 | 6_3:+7361834 | Msa0936560:CDS |
| TCAATGGTGTCAAAGTTTGG+TGG | 0.621281 | 6_3:+7362162 | Msa0936560:CDS |
| GATGGAATTTGGTCAGCATG+TGG | 0.626671 | 6_3:+7362884 | Msa0936560:CDS |
| GTTCATGAAATTCGCAATAG+CGG | 0.630066 | 6_3:-7362606 | None:intergenic |
| GATCCTGCTCTCATAAGGAG+GGG | 0.639749 | 6_3:+7362953 | Msa0936560:CDS |
| TTTGGTATAGAAGCACAAAG+TGG | 0.658913 | 6_3:+7362393 | Msa0936560:CDS |
| GGTCAGCATGTGGATCAGAG+AGG | 0.739195 | 6_3:+7362894 | Msa0936560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTTCATAAGATCATTT+AGG | - | chr6_3:7362490-7362509 | None:intergenic | 20.0% |
| !! | ATCTTATGAAATTCAAGAAA+GGG | + | chr6_3:7362495-7362514 | Msa0936560:CDS | 20.0% |
| !! | TCTTGAATTAACAATTGTTA+AGG | + | chr6_3:7362643-7362662 | Msa0936560:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | chr6_3:7362873-7362892 | Msa0936560:CDS | 20.0% |
| !!! | AATTTTCACAACTAATTTTG+TGG | + | chr6_3:7362922-7362941 | Msa0936560:CDS | 20.0% |
| !! | TGAATTTCATAAGATCATTT+AGG | - | chr6_3:7362490-7362509 | None:intergenic | 20.0% |
| !! | ATCTTATGAAATTCAAGAAA+GGG | + | chr6_3:7362495-7362514 | Msa0936560:CDS | 20.0% |
| !! | TCTTGAATTAACAATTGTTA+AGG | + | chr6_3:7362643-7362662 | Msa0936560:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | chr6_3:7362873-7362892 | Msa0936560:CDS | 20.0% |
| !!! | AATTTTCACAACTAATTTTG+TGG | + | chr6_3:7362922-7362941 | Msa0936560:CDS | 20.0% |
| ! | ATTTCTCATAGAAGGTTATT+TGG | - | chr6_3:7361980-7361999 | None:intergenic | 25.0% |
| ! | GATCTTATGAAATTCAAGAA+AGG | + | chr6_3:7362494-7362513 | Msa0936560:CDS | 25.0% |
| !!! | AAAGAGTATTATGCTAAAGT+TGG | + | chr6_3:7362518-7362537 | Msa0936560:CDS | 25.0% |
| !!! | TCTTTTTCAGCTTTCTTAAT+AGG | - | chr6_3:7362815-7362834 | None:intergenic | 25.0% |
| ! | AGAAGAGAAAAATGAAAGTA+AGG | + | chr6_3:7362832-7362851 | Msa0936560:CDS | 25.0% |
| !!! | GGTTTGTTGAATTTTATTGA+TGG | + | chr6_3:7362866-7362885 | Msa0936560:CDS | 25.0% |
| !!! | TAAGGTTGATGAAAAATTAG+AGG | + | chr6_3:7363312-7363331 | Msa0936560:CDS | 25.0% |
| ! | AAAATTAGAGGAAAAAGTGA+AGG | + | chr6_3:7363324-7363343 | Msa0936560:CDS | 25.0% |
| ! | ATTTCTCATAGAAGGTTATT+TGG | - | chr6_3:7361980-7361999 | None:intergenic | 25.0% |
| ! | GATCTTATGAAATTCAAGAA+AGG | + | chr6_3:7362494-7362513 | Msa0936560:CDS | 25.0% |
| !!! | AAAGAGTATTATGCTAAAGT+TGG | + | chr6_3:7362518-7362537 | Msa0936560:CDS | 25.0% |
| !!! | TCTTTTTCAGCTTTCTTAAT+AGG | - | chr6_3:7362815-7362834 | None:intergenic | 25.0% |
| ! | AGAAGAGAAAAATGAAAGTA+AGG | + | chr6_3:7362832-7362851 | Msa0936560:CDS | 25.0% |
| !!! | GGTTTGTTGAATTTTATTGA+TGG | + | chr6_3:7362866-7362885 | Msa0936560:CDS | 25.0% |
| !!! | TAAGGTTGATGAAAAATTAG+AGG | + | chr6_3:7363312-7363331 | Msa0936560:CDS | 25.0% |
| ! | AAAATTAGAGGAAAAAGTGA+AGG | + | chr6_3:7363324-7363343 | Msa0936560:CDS | 25.0% |
| AGAAGGTTATTTGGATGTAA+GGG | - | chr6_3:7361971-7361990 | None:intergenic | 30.0% | |
| TAGAAGGTTATTTGGATGTA+AGG | - | chr6_3:7361972-7361991 | None:intergenic | 30.0% | |
| ATAACCTTCTATGAGAAATC+AGG | + | chr6_3:7361981-7362000 | Msa0936560:CDS | 30.0% | |
| AGTTAGCACTAAGATATGTT+TGG | - | chr6_3:7362043-7362062 | None:intergenic | 30.0% | |
| TGAAAATGATTGTGTTCTTG+AGG | - | chr6_3:7362204-7362223 | None:intergenic | 30.0% | |
| ! | ATCTTTTCTCATCTGACTTA+GGG | - | chr6_3:7362232-7362251 | None:intergenic | 30.0% |
| ! | AATCTTTTCTCATCTGACTT+AGG | - | chr6_3:7362233-7362252 | None:intergenic | 30.0% |
| ! | ATGTCTTTTATGGAAGGTTA+GGG | - | chr6_3:7362261-7362280 | None:intergenic | 30.0% |
| AGGCTATAACAATGAAGAAT+AGG | + | chr6_3:7362330-7362349 | Msa0936560:CDS | 30.0% | |
| CTAACAATCCAAGCAATAAT+TGG | + | chr6_3:7362369-7362388 | Msa0936560:CDS | 30.0% | |
| !! | ATCCAAGCAATAATTGGTTT+TGG | + | chr6_3:7362375-7362394 | Msa0936560:CDS | 30.0% |
| TACCAAAACCAATTATTGCT+TGG | - | chr6_3:7362380-7362399 | None:intergenic | 30.0% | |
| !!! | AAGTTTTGAAACACTTGCTT+TGG | + | chr6_3:7362442-7362461 | Msa0936560:CDS | 30.0% |
| !!! | AGGATCTCTTCTTTCTTTTT+TGG | - | chr6_3:7362470-7362489 | None:intergenic | 30.0% |
| GTATTATGCTAAAGTTGGAA+AGG | + | chr6_3:7362523-7362542 | Msa0936560:CDS | 30.0% | |
| AAACGTGGTTATCTACTTTA+TGG | + | chr6_3:7362551-7362570 | Msa0936560:CDS | 30.0% | |
| TGATGAGAATGATGAAAAGA+AGG | + | chr6_3:7362787-7362806 | Msa0936560:CDS | 30.0% | |
| TGAAAGTAAGGTAACTCTTT+CGG | + | chr6_3:7362844-7362863 | Msa0936560:CDS | 30.0% | |
| TCCAGTTATTGAAAAGTTGT+TGG | + | chr6_3:7363075-7363094 | Msa0936560:CDS | 30.0% | |
| CCAGTTATTGAAAAGTTGTT+GGG | + | chr6_3:7363076-7363095 | Msa0936560:CDS | 30.0% | |
| ! | AAATCTTCAGTGATTGACTT+TGG | - | chr6_3:7363145-7363164 | None:intergenic | 30.0% |
| GAATTTGATTCAATCTCTTG+AGG | + | chr6_3:7363180-7363199 | Msa0936560:CDS | 30.0% | |
| GAAACAAGAATTAACTCAAG+AGG | + | chr6_3:7363279-7363298 | Msa0936560:CDS | 30.0% | |
| ATTAACTCAAGAGGAAGAAA+AGG | + | chr6_3:7363288-7363307 | Msa0936560:CDS | 30.0% | |
| AGAAGGTTATTTGGATGTAA+GGG | - | chr6_3:7361971-7361990 | None:intergenic | 30.0% | |
| TAGAAGGTTATTTGGATGTA+AGG | - | chr6_3:7361972-7361991 | None:intergenic | 30.0% | |
| ATAACCTTCTATGAGAAATC+AGG | + | chr6_3:7361981-7362000 | Msa0936560:CDS | 30.0% | |
| AGTTAGCACTAAGATATGTT+TGG | - | chr6_3:7362043-7362062 | None:intergenic | 30.0% | |
| TGAAAATGATTGTGTTCTTG+AGG | - | chr6_3:7362204-7362223 | None:intergenic | 30.0% | |
| ! | ATCTTTTCTCATCTGACTTA+GGG | - | chr6_3:7362232-7362251 | None:intergenic | 30.0% |
| ! | AATCTTTTCTCATCTGACTT+AGG | - | chr6_3:7362233-7362252 | None:intergenic | 30.0% |
| ! | ATGTCTTTTATGGAAGGTTA+GGG | - | chr6_3:7362261-7362280 | None:intergenic | 30.0% |
| AGGCTATAACAATGAAGAAT+AGG | + | chr6_3:7362330-7362349 | Msa0936560:CDS | 30.0% | |
| CTAACAATCCAAGCAATAAT+TGG | + | chr6_3:7362369-7362388 | Msa0936560:CDS | 30.0% | |
| !! | ATCCAAGCAATAATTGGTTT+TGG | + | chr6_3:7362375-7362394 | Msa0936560:CDS | 30.0% |
| TACCAAAACCAATTATTGCT+TGG | - | chr6_3:7362380-7362399 | None:intergenic | 30.0% | |
| !!! | AAGTTTTGAAACACTTGCTT+TGG | + | chr6_3:7362442-7362461 | Msa0936560:CDS | 30.0% |
| !!! | AGGATCTCTTCTTTCTTTTT+TGG | - | chr6_3:7362470-7362489 | None:intergenic | 30.0% |
| GTATTATGCTAAAGTTGGAA+AGG | + | chr6_3:7362523-7362542 | Msa0936560:CDS | 30.0% | |
| AAACGTGGTTATCTACTTTA+TGG | + | chr6_3:7362551-7362570 | Msa0936560:CDS | 30.0% | |
| TGATGAGAATGATGAAAAGA+AGG | + | chr6_3:7362787-7362806 | Msa0936560:CDS | 30.0% | |
| TGAAAGTAAGGTAACTCTTT+CGG | + | chr6_3:7362844-7362863 | Msa0936560:CDS | 30.0% | |
| TCCAGTTATTGAAAAGTTGT+TGG | + | chr6_3:7363075-7363094 | Msa0936560:CDS | 30.0% | |
| CCAGTTATTGAAAAGTTGTT+GGG | + | chr6_3:7363076-7363095 | Msa0936560:CDS | 30.0% | |
| ! | AAATCTTCAGTGATTGACTT+TGG | - | chr6_3:7363145-7363164 | None:intergenic | 30.0% |
| GAATTTGATTCAATCTCTTG+AGG | + | chr6_3:7363180-7363199 | Msa0936560:CDS | 30.0% | |
| GAAACAAGAATTAACTCAAG+AGG | + | chr6_3:7363279-7363298 | Msa0936560:CDS | 30.0% | |
| ATTAACTCAAGAGGAAGAAA+AGG | + | chr6_3:7363288-7363307 | Msa0936560:CDS | 30.0% | |
| TGGGAAGAATTTCTCATACA+TGG | - | chr6_3:7361892-7361911 | None:intergenic | 35.0% | |
| TTAACAAATCTACGAAGTGC+TGG | - | chr6_3:7361915-7361934 | None:intergenic | 35.0% | |
| ATCTCCTGATTTCTCATAGA+AGG | - | chr6_3:7361988-7362007 | None:intergenic | 35.0% | |
| AGCACTAAGATATGTTTGGA+TGG | - | chr6_3:7362039-7362058 | None:intergenic | 35.0% | |
| !! | TGCTTAGAACAAGTGGATTT+TGG | - | chr6_3:7362112-7362131 | None:intergenic | 35.0% |
| ! | AAATCCACTTGTTCTAAGCA+TGG | + | chr6_3:7362112-7362131 | Msa0936560:CDS | 35.0% |
| ! | AGTTCAATGGTGTCAAAGTT+TGG | + | chr6_3:7362159-7362178 | Msa0936560:CDS | 35.0% |
| ! | GATGTCTTTTATGGAAGGTT+AGG | - | chr6_3:7362262-7362281 | None:intergenic | 35.0% |
| ! | ATCACGATGTCTTTTATGGA+AGG | - | chr6_3:7362267-7362286 | None:intergenic | 35.0% |
| ! | TGAGATCACGATGTCTTTTA+TGG | - | chr6_3:7362271-7362290 | None:intergenic | 35.0% |
| CAAAACATGTTGGATGTAAG+AGG | - | chr6_3:7362300-7362319 | None:intergenic | 35.0% | |
| ! | CTCTTACATCCAACATGTTT+TGG | + | chr6_3:7362298-7362317 | Msa0936560:CDS | 35.0% |
| !!! | ATCCAACATGTTTTGGAACA+AGG | + | chr6_3:7362305-7362324 | Msa0936560:CDS | 35.0% |
| TTCCTTGTTCCAAAACATGT+TGG | - | chr6_3:7362310-7362329 | None:intergenic | 35.0% | |
| !!! | ACATGTTTTGGAACAAGGAA+AGG | + | chr6_3:7362310-7362329 | Msa0936560:CDS | 35.0% |
| ! | TTTGGTATAGAAGCACAAAG+TGG | + | chr6_3:7362393-7362412 | Msa0936560:CDS | 35.0% |
| ! | ATAGTAGATTTTCCAGTTCC+TGG | - | chr6_3:7362581-7362600 | None:intergenic | 35.0% |
| GTTCATGAAATTCGCAATAG+CGG | - | chr6_3:7362609-7362628 | None:intergenic | 35.0% | |
| GAAAGTAAGGTAACTCTTTC+GGG | + | chr6_3:7362845-7362864 | Msa0936560:CDS | 35.0% | |
| TTGTAGCTATCAAGCTTTCA+AGG | + | chr6_3:7363006-7363025 | Msa0936560:CDS | 35.0% | |
| ! | CCCAACAACTTTTCAATAAC+TGG | - | chr6_3:7363079-7363098 | None:intergenic | 35.0% |
| TCTTGAGGAAGCAAAGAAAA+AGG | + | chr6_3:7363195-7363214 | Msa0936560:CDS | 35.0% | |
| TCAAGAGGAAGAAAAGGTTA+AGG | + | chr6_3:7363294-7363313 | Msa0936560:CDS | 35.0% | |
| TGGGAAGAATTTCTCATACA+TGG | - | chr6_3:7361892-7361911 | None:intergenic | 35.0% | |
| TTAACAAATCTACGAAGTGC+TGG | - | chr6_3:7361915-7361934 | None:intergenic | 35.0% | |
| ATCTCCTGATTTCTCATAGA+AGG | - | chr6_3:7361988-7362007 | None:intergenic | 35.0% | |
| AGCACTAAGATATGTTTGGA+TGG | - | chr6_3:7362039-7362058 | None:intergenic | 35.0% | |
| !! | TGCTTAGAACAAGTGGATTT+TGG | - | chr6_3:7362112-7362131 | None:intergenic | 35.0% |
| ! | AAATCCACTTGTTCTAAGCA+TGG | + | chr6_3:7362112-7362131 | Msa0936560:CDS | 35.0% |
| ! | AGTTCAATGGTGTCAAAGTT+TGG | + | chr6_3:7362159-7362178 | Msa0936560:CDS | 35.0% |
| ! | GATGTCTTTTATGGAAGGTT+AGG | - | chr6_3:7362262-7362281 | None:intergenic | 35.0% |
| ! | ATCACGATGTCTTTTATGGA+AGG | - | chr6_3:7362267-7362286 | None:intergenic | 35.0% |
| ! | TGAGATCACGATGTCTTTTA+TGG | - | chr6_3:7362271-7362290 | None:intergenic | 35.0% |
| CAAAACATGTTGGATGTAAG+AGG | - | chr6_3:7362300-7362319 | None:intergenic | 35.0% | |
| ! | CTCTTACATCCAACATGTTT+TGG | + | chr6_3:7362298-7362317 | Msa0936560:CDS | 35.0% |
| !!! | ATCCAACATGTTTTGGAACA+AGG | + | chr6_3:7362305-7362324 | Msa0936560:CDS | 35.0% |
| TTCCTTGTTCCAAAACATGT+TGG | - | chr6_3:7362310-7362329 | None:intergenic | 35.0% | |
| !!! | ACATGTTTTGGAACAAGGAA+AGG | + | chr6_3:7362310-7362329 | Msa0936560:CDS | 35.0% |
| ! | TTTGGTATAGAAGCACAAAG+TGG | + | chr6_3:7362393-7362412 | Msa0936560:CDS | 35.0% |
| ! | ATAGTAGATTTTCCAGTTCC+TGG | - | chr6_3:7362581-7362600 | None:intergenic | 35.0% |
| GTTCATGAAATTCGCAATAG+CGG | - | chr6_3:7362609-7362628 | None:intergenic | 35.0% | |
| GAAAGTAAGGTAACTCTTTC+GGG | + | chr6_3:7362845-7362864 | Msa0936560:CDS | 35.0% | |
| TTGTAGCTATCAAGCTTTCA+AGG | + | chr6_3:7363006-7363025 | Msa0936560:CDS | 35.0% | |
| ! | CCCAACAACTTTTCAATAAC+TGG | - | chr6_3:7363079-7363098 | None:intergenic | 35.0% |
| TCTTGAGGAAGCAAAGAAAA+AGG | + | chr6_3:7363195-7363214 | Msa0936560:CDS | 35.0% | |
| TCAAGAGGAAGAAAAGGTTA+AGG | + | chr6_3:7363294-7363313 | Msa0936560:CDS | 35.0% | |
| GGTGAAATATGGTCAAACCT+AGG | + | chr6_3:7361834-7361853 | Msa0936560:CDS | 40.0% | |
| GTCAAACCTAGGCTCAATAA+TGG | + | chr6_3:7361845-7361864 | Msa0936560:CDS | 40.0% | |
| TCATCCATGCTTAGAACAAG+TGG | - | chr6_3:7362119-7362138 | None:intergenic | 40.0% | |
| TGAACTCATCTGTGATCTCT+TGG | - | chr6_3:7362145-7362164 | None:intergenic | 40.0% | |
| GAGATCACAGATGAGTTCAA+TGG | + | chr6_3:7362146-7362165 | Msa0936560:CDS | 40.0% | |
| ! | TCAATGGTGTCAAAGTTTGG+TGG | + | chr6_3:7362162-7362181 | Msa0936560:CDS | 40.0% |
| GCAAGTGTTTCAAAACTTGC+AGG | - | chr6_3:7362440-7362459 | None:intergenic | 40.0% | |
| ATGCTAAAGTTGGAAAGGCT+TGG | + | chr6_3:7362528-7362547 | Msa0936560:CDS | 40.0% | |
| TATCTACTTTATGGACCTCC+AGG | + | chr6_3:7362560-7362579 | Msa0936560:CDS | 40.0% | |
| ! | CTTTTTCTTCTTCCTTTGCC+CGG | - | chr6_3:7362756-7362775 | None:intergenic | 40.0% |
| AACTTGATCCTGCTCTCATA+AGG | + | chr6_3:7362948-7362967 | Msa0936560:CDS | 40.0% | |
| AAATTCTCAGCAACATCAGC+CGG | - | chr6_3:7363118-7363137 | None:intergenic | 40.0% | |
| GGAAGCAAAGAAAAAGGATG+AGG | + | chr6_3:7363201-7363220 | Msa0936560:CDS | 40.0% | |
| AGCAAAGAAAAAGGATGAGG+AGG | + | chr6_3:7363204-7363223 | Msa0936560:CDS | 40.0% | |
| GAGGAAAAAGTGAAGGAGAA+TGG | + | chr6_3:7363331-7363350 | Msa0936560:CDS | 40.0% | |
| GGTGAAATATGGTCAAACCT+AGG | + | chr6_3:7361834-7361853 | Msa0936560:CDS | 40.0% | |
| GTCAAACCTAGGCTCAATAA+TGG | + | chr6_3:7361845-7361864 | Msa0936560:CDS | 40.0% | |
| TCATCCATGCTTAGAACAAG+TGG | - | chr6_3:7362119-7362138 | None:intergenic | 40.0% | |
| TGAACTCATCTGTGATCTCT+TGG | - | chr6_3:7362145-7362164 | None:intergenic | 40.0% | |
| GAGATCACAGATGAGTTCAA+TGG | + | chr6_3:7362146-7362165 | Msa0936560:CDS | 40.0% | |
| ! | TCAATGGTGTCAAAGTTTGG+TGG | + | chr6_3:7362162-7362181 | Msa0936560:CDS | 40.0% |
| GCAAGTGTTTCAAAACTTGC+AGG | - | chr6_3:7362440-7362459 | None:intergenic | 40.0% | |
| ATGCTAAAGTTGGAAAGGCT+TGG | + | chr6_3:7362528-7362547 | Msa0936560:CDS | 40.0% | |
| TATCTACTTTATGGACCTCC+AGG | + | chr6_3:7362560-7362579 | Msa0936560:CDS | 40.0% | |
| ! | CTTTTTCTTCTTCCTTTGCC+CGG | - | chr6_3:7362756-7362775 | None:intergenic | 40.0% |
| AACTTGATCCTGCTCTCATA+AGG | + | chr6_3:7362948-7362967 | Msa0936560:CDS | 40.0% | |
| AAATTCTCAGCAACATCAGC+CGG | - | chr6_3:7363118-7363137 | None:intergenic | 40.0% | |
| GGAAGCAAAGAAAAAGGATG+AGG | + | chr6_3:7363201-7363220 | Msa0936560:CDS | 40.0% | |
| AGCAAAGAAAAAGGATGAGG+AGG | + | chr6_3:7363204-7363223 | Msa0936560:CDS | 40.0% | |
| GAGGAAAAAGTGAAGGAGAA+TGG | + | chr6_3:7363331-7363350 | Msa0936560:CDS | 40.0% | |
| TGCTAGCCATTATTGAGCCT+AGG | - | chr6_3:7361854-7361873 | None:intergenic | 45.0% | |
| !! | CAAATCTACGAAGTGCTGGT+GGG | - | chr6_3:7361911-7361930 | None:intergenic | 45.0% |
| !! | ACAAATCTACGAAGTGCTGG+TGG | - | chr6_3:7361912-7361931 | None:intergenic | 45.0% |
| ! | GTAGATTTTCCAGTTCCTGG+AGG | - | chr6_3:7362578-7362597 | None:intergenic | 45.0% |
| GATTGTTCTCTCGATCTCAC+CGG | + | chr6_3:7362734-7362753 | Msa0936560:CDS | 45.0% | |
| ATTGTTCTCTCGATCTCACC+GGG | + | chr6_3:7362735-7362754 | Msa0936560:CDS | 45.0% | |
| CGGGCAAAGGAAGAAGAAAA+AGG | + | chr6_3:7362754-7362773 | Msa0936560:CDS | 45.0% | |
| GATGGAATTTGGTCAGCATG+TGG | + | chr6_3:7362884-7362903 | Msa0936560:CDS | 45.0% | |
| TTGATCCTGCTCTCATAAGG+AGG | + | chr6_3:7362951-7362970 | Msa0936560:CDS | 45.0% | |
| TGATCCTGCTCTCATAAGGA+GGG | + | chr6_3:7362952-7362971 | Msa0936560:CDS | 45.0% | |
| GGGAGAGACTAATATGTCAC+CGG | + | chr6_3:7363096-7363115 | Msa0936560:CDS | 45.0% | |
| TGCTAGCCATTATTGAGCCT+AGG | - | chr6_3:7361854-7361873 | None:intergenic | 45.0% | |
| !! | CAAATCTACGAAGTGCTGGT+GGG | - | chr6_3:7361911-7361930 | None:intergenic | 45.0% |
| !! | ACAAATCTACGAAGTGCTGG+TGG | - | chr6_3:7361912-7361931 | None:intergenic | 45.0% |
| ! | GTAGATTTTCCAGTTCCTGG+AGG | - | chr6_3:7362578-7362597 | None:intergenic | 45.0% |
| GATTGTTCTCTCGATCTCAC+CGG | + | chr6_3:7362734-7362753 | Msa0936560:CDS | 45.0% | |
| ATTGTTCTCTCGATCTCACC+GGG | + | chr6_3:7362735-7362754 | Msa0936560:CDS | 45.0% | |
| CGGGCAAAGGAAGAAGAAAA+AGG | + | chr6_3:7362754-7362773 | Msa0936560:CDS | 45.0% | |
| GATGGAATTTGGTCAGCATG+TGG | + | chr6_3:7362884-7362903 | Msa0936560:CDS | 45.0% | |
| TTGATCCTGCTCTCATAAGG+AGG | + | chr6_3:7362951-7362970 | Msa0936560:CDS | 45.0% | |
| TGATCCTGCTCTCATAAGGA+GGG | + | chr6_3:7362952-7362971 | Msa0936560:CDS | 45.0% | |
| GGGAGAGACTAATATGTCAC+CGG | + | chr6_3:7363096-7363115 | Msa0936560:CDS | 45.0% | |
| GTTGGAAAGGCTTGGAAACG+TGG | + | chr6_3:7362536-7362555 | Msa0936560:CDS | 50.0% | |
| CTTTATGGACCTCCAGGAAC+TGG | + | chr6_3:7362566-7362585 | Msa0936560:CDS | 50.0% | |
| GATCCTGCTCTCATAAGGAG+GGG | + | chr6_3:7362953-7362972 | Msa0936560:CDS | 50.0% | |
| TCTCATAAGGAGGGGACGAA+TGG | + | chr6_3:7362961-7362980 | Msa0936560:CDS | 50.0% | |
| GTTGGAAAGGCTTGGAAACG+TGG | + | chr6_3:7362536-7362555 | Msa0936560:CDS | 50.0% | |
| CTTTATGGACCTCCAGGAAC+TGG | + | chr6_3:7362566-7362585 | Msa0936560:CDS | 50.0% | |
| GATCCTGCTCTCATAAGGAG+GGG | + | chr6_3:7362953-7362972 | Msa0936560:CDS | 50.0% | |
| TCTCATAAGGAGGGGACGAA+TGG | + | chr6_3:7362961-7362980 | Msa0936560:CDS | 50.0% | |
| GGTCAGCATGTGGATCAGAG+AGG | + | chr6_3:7362894-7362913 | Msa0936560:CDS | 55.0% | |
| AGACGAGCAAGCTCAGCTCA+AGG | + | chr6_3:7363246-7363265 | Msa0936560:CDS | 55.0% | |
| GGTCAGCATGTGGATCAGAG+AGG | + | chr6_3:7362894-7362913 | Msa0936560:CDS | 55.0% | |
| AGACGAGCAAGCTCAGCTCA+AGG | + | chr6_3:7363246-7363265 | Msa0936560:CDS | 55.0% | |
| CTCTCGATCTCACCGGGCAA+AGG | + | chr6_3:7362741-7362760 | Msa0936560:CDS | 60.0% | |
| CGTCCCCTCCTTATGAGAGC+AGG | - | chr6_3:7362959-7362978 | None:intergenic | 60.0% | |
| CTCTCGATCTCACCGGGCAA+AGG | + | chr6_3:7362741-7362760 | Msa0936560:CDS | 60.0% | |
| CGTCCCCTCCTTATGAGAGC+AGG | - | chr6_3:7362959-7362978 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 7361825 | 7363366 | 7361825 | ID=Msa0936560;Name=Msa0936560 |
| chr6_3 | mRNA | 7361825 | 7363366 | 7361825 | ID=Msa0936560-mRNA-1;Parent=Msa0936560;Name=Msa0936560-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|513 |
| chr6_3 | exon | 7361825 | 7363366 | 7361825 | ID=Msa0936560-mRNA-1:exon:2380;Parent=Msa0936560-mRNA-1 |
| chr6_3 | CDS | 7361825 | 7363366 | 7361825 | ID=Msa0936560-mRNA-1:cds;Parent=Msa0936560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
