AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0555020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0555020 MtrunA17_Chr4g0040821 88.349 987 60 4 1 982 1 937 0.0 1681
Msa0555020 MtrunA17_Chr4g0038061 74.578 1007 180 7 1 982 1 956 0.0 1427
Msa0555020 MtrunA17_Chr4g0038041 81.967 61 11 0 187 247 7 67 1.84e-31 117
Msa0555020 MtrunA17_Chr4g0038051 79.710 69 13 1 278 345 1 69 7.21e-30 113
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0555020 AT1G17680.3 59.539 304 99 1 678 981 616 895 7.31e-117 380
Msa0555020 AT1G17680.3 37.910 488 258 7 95 577 88 535 3.46e-77 271
Msa0555020 AT1G17680.2 59.539 304 99 1 678 981 616 895 7.31e-117 380
Msa0555020 AT1G17680.2 37.910 488 258 7 95 577 88 535 3.46e-77 271
Msa0555020 AT1G17680.1 59.539 304 99 1 678 981 616 895 7.31e-117 380
Msa0555020 AT1G17680.1 37.910 488 258 7 95 577 88 535 3.46e-77 271

Find 219 sgRNAs with CRISPR-Local

Find 1047 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTTAACTTTCAAATTTA+AGG 0.080716 4_1:-52758722 None:intergenic
GGTGGTAGTCTTCCAATTTC+TGG 0.082870 4_1:-52754180 None:intergenic
CATTGTCTTGTAGTATTTCT+AGG 0.150542 4_1:-52761983 None:intergenic
AGAGGAGGAATTAATGAATT+TGG 0.152418 4_1:+52754671 Msa0555020:CDS
TTGTGATGGCATTGAGTTTA+TGG 0.192259 4_1:+52763119 Msa0555020:CDS
CTCGGTACTCCATCGATTTC+TGG 0.226719 4_1:-52754201 None:intergenic
AGCATTCCTCTACAATAATT+TGG 0.233608 4_1:+52766425 Msa0555020:CDS
TGTTCAATTGTACCAGAAAT+TGG 0.235218 4_1:+52754168 Msa0555020:CDS
TAGTAGATGGTTTCTGTATA+TGG 0.237895 4_1:+52768291 Msa0555020:three_prime_UTR
ATGAGAAGGTGATTGCTATT+AGG 0.244036 4_1:+52767959 Msa0555020:CDS
TGAGAAGGTGATTGCTATTA+GGG 0.256786 4_1:+52767960 Msa0555020:CDS
GATGATCTTCATCCTCCTTC+TGG 0.260335 4_1:-52753946 None:intergenic
GCAAGGGAAGATGATATTTC+TGG 0.262174 4_1:+52754630 Msa0555020:CDS
CGCCTTAATTTCCATCAATA+TGG 0.262883 4_1:-52758644 None:intergenic
ACAACTGTACATTCATATTA+AGG 0.269475 4_1:-52765472 None:intergenic
TGCTTTCGAAATACAATAAC+TGG 0.275722 4_1:-52757665 None:intergenic
TACCATATTGATGGAAATTA+AGG 0.286308 4_1:+52758642 Msa0555020:CDS
AAGAAAATTCATCATCAAAA+TGG 0.291614 4_1:+52753913 None:intergenic
TTGTCTCCTCCAAAGGATTC+TGG 0.294300 4_1:+52762074 Msa0555020:CDS
TGATACGGGTCAGGTAAATT+TGG 0.302254 4_1:-52756107 None:intergenic
TCCCAAAGTGATGAATCTTT+TGG 0.304300 4_1:-52756209 None:intergenic
TTTCTATGGTGTATTTGGTT+TGG 0.307404 4_1:+52763042 Msa0555020:CDS
GAGGAGGAATTAATGAATTT+GGG 0.312899 4_1:+52754672 Msa0555020:CDS
CAATATATTTATTTAGTAGA+TGG 0.317308 4_1:+52768278 Msa0555020:three_prime_UTR
GGCCTTGGTCAACCTGGCGC+TGG 0.319693 4_1:+52766359 Msa0555020:CDS
CTTTCCCCTCCTCAACTAGA+AGG 0.325341 4_1:-52762031 None:intergenic
TCCAAAAGATTCATCACTTT+GGG 0.330712 4_1:+52756208 Msa0555020:CDS
ACACAATCAAAACCTTGTTT+AGG 0.335593 4_1:-52765848 None:intergenic
ACAAACTGCAAATTATCTTC+AGG 0.336314 4_1:+52768174 Msa0555020:three_prime_UTR
TAAGGTGGCGCACATTAAAA+AGG 0.341922 4_1:-52765454 None:intergenic
GCTTTAACTTTCAAATTTAA+GGG 0.357085 4_1:-52758721 None:intergenic
GCCTTCTAAGACTAATATCT+TGG 0.358473 4_1:-52757702 None:intergenic
ACGTGCTTGCTTGCATTCTC+TGG 0.359617 4_1:-52759561 None:intergenic
CAATTAGGTCGAAAGCTTCC+AGG 0.364510 4_1:+52765120 Msa0555020:intron
CTCCAAAAGATTCATCACTT+TGG 0.366950 4_1:+52756207 Msa0555020:CDS
AAAGATCATTGTTCCGTTTG+AGG 0.368120 4_1:+52768138 Msa0555020:CDS
GCTCAACTTGACCACACTTT+TGG 0.370971 4_1:-52758543 None:intergenic
GGAGCTGTCCATGGTGCAAT+TGG 0.371499 4_1:+52756137 Msa0555020:CDS
TGTCTTTGAATCATTGCTGC+TGG 0.372356 4_1:-52768352 None:intergenic
TGGGGATCATGAAAATGAAA+TGG 0.381145 4_1:+52756157 Msa0555020:CDS
TCTACTTGGTACCATATTGA+TGG 0.390259 4_1:+52758633 Msa0555020:CDS
AAAGCCGAGGCAGTGGCCTC+TGG 0.397065 4_1:+52765188 Msa0555020:CDS
TATCAATTTAACTCTAAGAT+TGG 0.400611 4_1:+52765541 Msa0555020:CDS
CAGTGGAGGAAGATCAATTC+AGG 0.404404 4_1:+52754095 Msa0555020:CDS
CCTTCTAAGACTAATATCTT+GGG 0.404695 4_1:-52757701 None:intergenic
ACACTTGCATTTACTCCATC+TGG 0.405571 4_1:-52758604 None:intergenic
CCCAAGATATTAGTCTTAGA+AGG 0.407399 4_1:+52757701 Msa0555020:CDS
GAGCTGTCCATGGTGCAATT+GGG 0.409612 4_1:+52756138 Msa0555020:CDS
GGGGATCATGAAAATGAAAT+GGG 0.416645 4_1:+52756158 Msa0555020:CDS
GCCTTGGTCAACCTGGCGCT+GGG 0.420149 4_1:+52766360 Msa0555020:CDS
CAAAGACATGCTGAAGTGTT+TGG 0.425167 4_1:+52768367 Msa0555020:three_prime_UTR
CAAACTGCAAATTATCTTCA+GGG 0.427965 4_1:+52768175 Msa0555020:three_prime_UTR
GCTTATCAGACAAAATATAA+AGG 0.428663 4_1:-52768212 None:intergenic
AGATTAACCAATGGATTCTC+AGG 0.429542 4_1:-52766234 None:intergenic
ACCGTACAATGCGTCGTCTT+CGG 0.429641 4_1:-52754005 None:intergenic
TGCTAGATGTTATCGATCCT+TGG 0.430229 4_1:+52761089 Msa0555020:CDS
GCAGACTCATTGATGGGTCT+TGG 0.435759 4_1:+52759603 Msa0555020:CDS
TTCCTTGTTGTCTCCTCCAA+AGG 0.436418 4_1:+52762067 Msa0555020:CDS
GTCTTTGAATCATTGCTGCT+GGG 0.437041 4_1:-52768351 None:intergenic
TGTTGAAGCACGCATAGCTT+TGG 0.438227 4_1:+52762004 Msa0555020:CDS
CACAAGGGAGAATCTGTGTT+AGG 0.442926 4_1:-52765353 None:intergenic
TTAAATTTGAAAGTTAAAGC+TGG 0.445910 4_1:+52758724 Msa0555020:CDS
TGTGAATGTAAGTCTCCCTT+TGG 0.449427 4_1:+52762280 Msa0555020:CDS
GGAATCTGCCATGTTCATCT+TGG 0.450294 4_1:+52758745 Msa0555020:CDS
TCTCATTCTTCTCAGTAGAC+AGG 0.455477 4_1:-52765574 None:intergenic
TGGAGGAGACAACAAGGAAA+TGG 0.456082 4_1:-52762063 None:intergenic
TTACAAGTACCAGAATCCTT+TGG 0.456803 4_1:-52762083 None:intergenic
TGCTTGTTTCCTTTCTTCCA+AGG 0.456939 4_1:-52761106 None:intergenic
TCCATGGAGATATATACTAA+TGG 0.457963 4_1:+52762137 Msa0555020:CDS
TCGTTGTCTTCTATCGCCCT+TGG 0.458096 4_1:-52753968 None:intergenic
GGAATTAATGAATTTGGGAC+AGG 0.462807 4_1:+52754677 Msa0555020:CDS
GCTTTCTGTTGTCGAGAGCT+CGG 0.464166 4_1:-52754219 None:intergenic
TACAGAAAACAAGGTGATGC+TGG 0.465050 4_1:+52757637 Msa0555020:intron
TCCTTGCCGCATCTTGATGA+TGG 0.467630 4_1:-52766185 None:intergenic
GAAGTCTGAAACCCAGCGCC+AGG 0.469209 4_1:-52766371 None:intergenic
ATTGTCTTGTAGTATTTCTA+GGG 0.472825 4_1:-52761982 None:intergenic
GTTATCGATCCTTGGAAGAA+AGG 0.473441 4_1:+52761097 Msa0555020:CDS
TCAAATATTACCTTTCGTCT+AGG 0.473511 4_1:-52762329 None:intergenic
TAGAACAATCTCAAGTGGTT+GGG 0.475771 4_1:+52758689 Msa0555020:CDS
TTGTGATCAAAGTTCTTCCA+TGG 0.479539 4_1:+52762121 Msa0555020:CDS
CAAGGGAAGATGATATTTCT+GGG 0.480036 4_1:+52754631 Msa0555020:CDS
CATCAATGAGTCTGCGACCT+CGG 0.480689 4_1:-52759595 None:intergenic
ATTTGTCATGCCTTGTATCT+CGG 0.480929 4_1:-52766083 None:intergenic
GAGAAAGAAAGCCGAGGCAG+TGG 0.482279 4_1:+52765181 Msa0555020:CDS
AAGCATCAGTGTGTTGTACA+AGG 0.483840 4_1:+52766399 Msa0555020:CDS
CCTGACCCGTATCACATCCT+TGG 0.485736 4_1:+52756116 Msa0555020:CDS
TTCTGGTACAATTGAACACT+GGG 0.488096 4_1:-52754163 None:intergenic
GGCTTCCCTTCTAGTTGAGG+AGG 0.488281 4_1:+52762025 Msa0555020:CDS
AATGATCATATAACCTCAAA+CGG 0.492460 4_1:-52768151 None:intergenic
ATTACCTTTCGTCTAGGAGC+TGG 0.492478 4_1:-52762323 None:intergenic
ATTCTGAAAAGTCAAATAGA+TGG 0.495172 4_1:+52762189 Msa0555020:CDS
CTGCGAAGGTTGCAGTAACC+AGG 0.496459 4_1:-52768045 None:intergenic
CCAAGGATGTGATACGGGTC+AGG 0.497482 4_1:-52756116 None:intergenic
GGAGATCTGCAAGAACAGTC+AGG 0.497562 4_1:+52766446 Msa0555020:CDS
TACTAACATCAATGATTAGC+TGG 0.498458 4_1:-52765403 None:intergenic
TTTGGCTTCCCTTCTAGTTG+AGG 0.498866 4_1:+52762022 Msa0555020:CDS
CACATCCTTGGAGCTGTCCA+TGG 0.499813 4_1:+52756128 Msa0555020:CDS
ATCTGCATTTAATCTACAAA+AGG 0.500227 4_1:+52768082 Msa0555020:CDS
CGAGGTCGCAGACTCATTGA+TGG 0.502814 4_1:+52759596 Msa0555020:CDS
AGGTACGGCCTTGGTCAACC+TGG 0.503195 4_1:+52766353 Msa0555020:intron
CCATGTTCATCTTGGAAACA+TGG 0.503774 4_1:+52758753 Msa0555020:CDS
AATCTTTATACAACATAGCT+CGG 0.507245 4_1:+52767893 Msa0555020:CDS
GCTTCCCTTCTAGTTGAGGA+GGG 0.511143 4_1:+52762026 Msa0555020:CDS
GAGGAAGATCAATTCAGGTT+CGG 0.513981 4_1:+52754100 Msa0555020:CDS
TGTAATCTTCACAAAGATGA+AGG 0.514832 4_1:+52765374 Msa0555020:CDS
CAAGTACCAGAATCCTTTGG+AGG 0.520382 4_1:-52762080 None:intergenic
GAAAAGATATCACAAATGTT+CGG 0.522632 4_1:+52755246 Msa0555020:CDS
ACCGAAGACGACGCATTGTA+CGG 0.529389 4_1:+52754004 Msa0555020:CDS
AGACTTCTTCTAAGAAGGCA+AGG 0.529519 4_1:+52754613 Msa0555020:CDS
CTCATTCTTCTCAGTAGACA+GGG 0.532616 4_1:-52765573 None:intergenic
TGGTTTCTGTATATGGTTGG+TGG 0.532817 4_1:+52768298 Msa0555020:three_prime_UTR
TTTCTGGTACAATTGAACAC+TGG 0.535877 4_1:-52754164 None:intergenic
CCATGTTTCCAAGATGAACA+TGG 0.536692 4_1:-52758753 None:intergenic
TGACTCAGATGATGAGCCTC+AGG 0.539502 4_1:+52765229 Msa0555020:CDS
TTTGGGAAAGGCTCTTTGTG+TGG 0.539920 4_1:+52756225 Msa0555020:CDS
ATAGAACAATCTCAAGTGGT+TGG 0.540791 4_1:+52758688 Msa0555020:CDS
TGGAAACATGGAAATCGCTC+AGG 0.540833 4_1:+52758765 Msa0555020:CDS
AATAATGTACCGTGTCATAA+CGG 0.541071 4_1:-52755296 None:intergenic
TGCACTAAAAGAAGCAGCTA+AGG 0.541473 4_1:+52757813 Msa0555020:CDS
AGCTTGGAATTGCTACTACA+AGG 0.541630 4_1:+52765907 Msa0555020:CDS
ATGTGTTGCATGAAGTTGTC+AGG 0.541653 4_1:+52756078 Msa0555020:CDS
AAAACCTTGTTTAGGATCTG+TGG 0.541774 4_1:-52765840 None:intergenic
TGAAGAGACTTCTTCTAAGA+AGG 0.542455 4_1:+52754608 Msa0555020:CDS
AAGATTCATCACTTTGGGAA+AGG 0.544028 4_1:+52756213 Msa0555020:CDS
ATGTTTCTTAGGTACGGCCT+TGG 0.545130 4_1:+52766344 Msa0555020:intron
CCATTGGTTAATCTTTGTGT+CGG 0.546202 4_1:+52766243 Msa0555020:CDS
ACTTCTGCCTGAGAATCCAT+TGG 0.549095 4_1:+52766227 Msa0555020:CDS
ATCTTTATACAACATAGCTC+GGG 0.550470 4_1:+52767894 Msa0555020:CDS
CTTCCCTTCTAGTTGAGGAG+GGG 0.550556 4_1:+52762027 Msa0555020:CDS
TAAACTGATGCGCAGAAATG+AGG 0.550840 4_1:-52766152 None:intergenic
CTGAAAAGTCAAATAGATGG+TGG 0.552727 4_1:+52762192 Msa0555020:CDS
TGCGTCGTCTTCGGTGTCGA+CGG 0.553341 4_1:-52753996 None:intergenic
AGATGGTTTCTGTATATGGT+TGG 0.553352 4_1:+52768295 Msa0555020:three_prime_UTR
CAGTGGCCTCTGGAATTGAC+TGG 0.555068 4_1:+52765198 Msa0555020:CDS
CAGCTCCAAGGATGTGATAC+GGG 0.558237 4_1:-52756121 None:intergenic
GCAAGTGTAGTTGATCTACT+TGG 0.559239 4_1:+52758619 Msa0555020:CDS
AATTAGGTCGAAAGCTTCCA+GGG 0.561911 4_1:+52765121 Msa0555020:intron
ACAGCTCCAAGGATGTGATA+CGG 0.562158 4_1:-52756122 None:intergenic
TCAGAGATTCGTGTACCAAA+GGG 0.562471 4_1:-52762295 None:intergenic
CTTCTAAGACTAATATCTTG+GGG 0.563281 4_1:-52757700 None:intergenic
GAGAATGAAGAAGAAGAGGA+AGG 0.563901 4_1:+52754061 Msa0555020:CDS
TTCAGAGATTCGTGTACCAA+AGG 0.570873 4_1:-52762296 None:intergenic
AGTTACCGGTGAGGTTGTTG+CGG 0.571020 4_1:-52754250 None:intergenic
GTTCATAGAACAATCTCAAG+TGG 0.571430 4_1:+52758684 Msa0555020:CDS
GCAAAGGTATAGCGAAGCAT+TGG 0.573738 4_1:+52765514 Msa0555020:CDS
ATGCACATAGTGTTGCAGCT+TGG 0.575842 4_1:+52765891 Msa0555020:CDS
TACCGGTGAGGTTGTTGCGG+TGG 0.576570 4_1:-52754247 None:intergenic
AGCTGTCCATGGTGCAATTG+GGG 0.576733 4_1:+52756139 Msa0555020:CDS
ACCATTAGTATATATCTCCA+TGG 0.576890 4_1:-52762138 None:intergenic
GTCGGAGAATGAAGAAGAAG+AGG 0.577091 4_1:+52754057 Msa0555020:CDS
TTTCCCCTCCTCAACTAGAA+GGG 0.577242 4_1:-52762030 None:intergenic
GACTGGAAAACCGAGATACA+AGG 0.579639 4_1:+52766073 Msa0555020:intron
AACCACCGCAACAACCTCAC+CGG 0.580043 4_1:+52754245 Msa0555020:CDS
AATGGAAGTGATTAACCAGA+AGG 0.581471 4_1:+52753931 Msa0555020:exon
CGGAGAAGAAGAAGACGCGT+CGG 0.581986 4_1:+52754039 Msa0555020:CDS
ATTTAATCTACAAAAGGAGT+GGG 0.585090 4_1:+52768088 Msa0555020:CDS
TTGTACGGTGCGGAAGAGAA+CGG 0.590207 4_1:+52754019 Msa0555020:CDS
AGGAGGATGAAGATCATCCA+AGG 0.591354 4_1:+52753951 Msa0555020:CDS
AGATCTCCAAATTATTGTAG+AGG 0.594686 4_1:-52766431 None:intergenic
TGAATTTGGGACAGGGCAAG+AGG 0.596139 4_1:+52754685 Msa0555020:CDS
TGTAAGCTGCCTCTCTGCGA+AGG 0.596269 4_1:-52768059 None:intergenic
GGCAGCAATATATTATGAGA+AGG 0.596270 4_1:+52767945 Msa0555020:CDS
AATTCCAGAGGCCACTGCCT+CGG 0.597422 4_1:-52765192 None:intergenic
GGTGAGGTACTTGCAGACTC+TGG 0.597617 4_1:+52762158 Msa0555020:CDS
GTCATTGAAAATCACAAACC+TGG 0.598729 4_1:+52768027 Msa0555020:CDS
ATGCATTAGCATCCTTGCAA+AGG 0.599277 4_1:+52765498 Msa0555020:CDS
CATGATCCCCAATTGCACCA+TGG 0.602297 4_1:-52756145 None:intergenic
TCATGTTGGTCTTGTAACAC+TGG 0.603510 4_1:+52767924 Msa0555020:CDS
GTTGCATGAAGTTGTCAGGC+TGG 0.604528 4_1:+52756082 Msa0555020:CDS
GACTTCTTCTAAGAAGGCAA+GGG 0.604579 4_1:+52754614 Msa0555020:CDS
TGAAAAGTCAAATAGATGGT+GGG 0.604915 4_1:+52762193 Msa0555020:CDS
TGCTTCGCTATACCTTTGCA+AGG 0.605006 4_1:-52765510 None:intergenic
GCCATCATCAAGATGCGGCA+AGG 0.607500 4_1:+52766184 Msa0555020:CDS
ATTCCTCCTCTACATCAGCT+AGG 0.607922 4_1:-52754659 None:intergenic
CTTTAGTTCTACCAAAAGTG+TGG 0.610054 4_1:+52758532 Msa0555020:intron
CGGCAACGGTGTAAATCCGT+TGG 0.610408 4_1:+52754120 Msa0555020:CDS
GAAGATGATATTTCTGGGGT+AGG 0.611497 4_1:+52754636 Msa0555020:CDS
ATCTTTGTGAAGATTACACA+AGG 0.612893 4_1:-52765369 None:intergenic
TGCGCAGAAATGAGGATAGG+AGG 0.613954 4_1:-52766144 None:intergenic
ATCCTTTGGAGGAGACAACA+AGG 0.615714 4_1:-52762069 None:intergenic
TACGAGTCGCCGTTATGACA+CGG 0.618646 4_1:+52755287 Msa0555020:CDS
GAGGTCGCAGACTCATTGAT+GGG 0.622019 4_1:+52759597 Msa0555020:CDS
TGATGCGCAGAAATGAGGAT+AGG 0.622178 4_1:-52766147 None:intergenic
GGAAGGAGAAAACGATACAG+TGG 0.622714 4_1:+52754078 Msa0555020:CDS
CATTTAATCTACAAAAGGAG+TGG 0.623135 4_1:+52768087 Msa0555020:CDS
GATCAATTCAGGTTCGGCAA+CGG 0.623537 4_1:+52754106 Msa0555020:CDS
GTGTTACAAGACCAACATGA+TGG 0.623553 4_1:-52767921 None:intergenic
GGCGACTCGTATAGTGCATG+AGG 0.625347 4_1:-52755275 None:intergenic
GGAGGATGAAGATCATCCAA+GGG 0.630313 4_1:+52753952 Msa0555020:CDS
ACCCAGCGCCAGGTTGACCA+AGG 0.630990 4_1:-52766361 None:intergenic
GCTCGGGCATACCATCATGT+TGG 0.635857 4_1:+52767910 Msa0555020:CDS
TGTTCCAGCTCCTAGACGAA+AGG 0.638282 4_1:+52762319 Msa0555020:CDS
TTGCACCATGGACAGCTCCA+AGG 0.639528 4_1:-52756133 None:intergenic
AGGCCTAGCTGATGTAGAGG+AGG 0.641327 4_1:+52754656 Msa0555020:CDS
GGAAGTGATTAACCAGAAGG+AGG 0.641592 4_1:+52753934 Msa0555020:CDS
AGACTACCACCAGAAATCGA+TGG 0.645298 4_1:+52754192 Msa0555020:CDS
GATTAAGTTAGTTACCGGTG+AGG 0.657054 4_1:-52754259 None:intergenic
TATCTGAAGAGTAAACCAGA+TGG 0.662621 4_1:+52758589 Msa0555020:CDS
TTCTAAGACTAATATCTTGG+GGG 0.668365 4_1:-52757699 None:intergenic
CCGACACAAAGATTAACCAA+TGG 0.670200 4_1:-52766243 None:intergenic
GGTACTCCATCGATTTCTGG+TGG 0.670533 4_1:-52754198 None:intergenic
CTGTTACGTACGAAGTCCAA+CGG 0.670958 4_1:-52754136 None:intergenic
AGGAGAAAACGATACAGTGG+AGG 0.671026 4_1:+52754081 Msa0555020:CDS
ACTGTACATTCATATTAAGG+TGG 0.673366 4_1:-52765469 None:intergenic
AACACCACAGATCCTAAACA+AGG 0.677930 4_1:+52765836 Msa0555020:CDS
GAATTAATGAATTTGGGACA+GGG 0.678680 4_1:+52754678 Msa0555020:CDS
GGTAGGCCTAGCTGATGTAG+AGG 0.679989 4_1:+52754653 Msa0555020:CDS
ATGTAGCCATCATCAAGATG+CGG 0.682298 4_1:+52766179 Msa0555020:CDS
GGAGATATATACTAATGGTG+AGG 0.685568 4_1:+52762142 Msa0555020:CDS
GCGACTCGTATAGTGCATGA+GGG 0.688371 4_1:-52755274 None:intergenic
ACTTAGCCAGTCAATTCCAG+AGG 0.702156 4_1:-52765204 None:intergenic
GCTACTACAAGGTCGTATCG+AGG 0.704787 4_1:+52765918 Msa0555020:CDS
AAGGGAAGATGATATTTCTG+GGG 0.706308 4_1:+52754632 Msa0555020:CDS
TCTTTGTGAAGATTACACAA+GGG 0.712083 4_1:-52765368 None:intergenic
GAAGGAGAGAAAGAAAGCCG+AGG 0.715440 4_1:+52765175 Msa0555020:CDS
TTTAATCTACAAAAGGAGTG+GGG 0.720229 4_1:+52768089 Msa0555020:CDS
TTACTGCAACCTTCGCAGAG+AGG 0.724847 4_1:+52768050 Msa0555020:CDS
AGACGACGCATTGTACGGTG+CGG 0.742584 4_1:+52754009 Msa0555020:CDS
GCACGTTGAGTTGATCACCG+AGG 0.799843 4_1:+52759578 Msa0555020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTAGTAAAAAATAA+AGG + chr4_1:52759743-52759762 Msa0555020:intron 10.0%
!! TTGATTTAGTAAAAAATAAA+GGG + chr4_1:52759744-52759763 Msa0555020:intron 10.0%
!! TCAAAAAAAAAAATCTTTAT+GGG - chr4_1:52764252-52764271 None:intergenic 10.0%
!! AAATCAAAATAAAAAATGAA+TGG + chr4_1:52765692-52765711 Msa0555020:intron 10.0%
!! AATTTATTTATGCATTAATA+AGG + chr4_1:52767835-52767854 Msa0555020:intron 10.0%
!!! AAATAAATAATTTGTGTGTA+CGG + chr4_1:52756375-52756394 Msa0555020:intron 15.0%
!! GTTAATTTAATTGTGTAATA+GGG - chr4_1:52757059-52757078 None:intergenic 15.0%
!! AGTTAATTTAATTGTGTAAT+AGG - chr4_1:52757060-52757079 None:intergenic 15.0%
!! TTGTAATTAATAACTAATCA+GGG - chr4_1:52757318-52757337 None:intergenic 15.0%
!! ATTGTAATTAATAACTAATC+AGG - chr4_1:52757319-52757338 None:intergenic 15.0%
!! TTTCTACTATATATCTATAT+CGG + chr4_1:52757411-52757430 Msa0555020:intron 15.0%
!!! AAAACTTTTTTGTCATTTTA+GGG - chr4_1:52757499-52757518 None:intergenic 15.0%
!! TTAAACAATCAGTTTATATA+TGG + chr4_1:52757575-52757594 Msa0555020:intron 15.0%
!! TTAATGATTATATGCAATAT+AGG + chr4_1:52757923-52757942 Msa0555020:intron 15.0%
!!! TAATTTTTATAAGAAGCATT+AGG + chr4_1:52758162-52758181 Msa0555020:intron 15.0%
!! TTTAAAAAAAATTCAGACTT+TGG - chr4_1:52759006-52759025 None:intergenic 15.0%
!!! GTAAATCAAATTGTATTTTA+GGG + chr4_1:52759331-52759350 Msa0555020:intron 15.0%
!!! AATTATACGAGTTTTTATTT+TGG + chr4_1:52759470-52759489 Msa0555020:intron 15.0%
!!! ATTGAATTATTTTAAGATGT+TGG + chr4_1:52759641-52759660 Msa0555020:CDS 15.0%
!! ATAGTAAAAATGAAAATGTA+CGG + chr4_1:52759670-52759689 Msa0555020:intron 15.0%
!!! TTTTCTGTTTTGATTTTATT+TGG + chr4_1:52759716-52759735 Msa0555020:intron 15.0%
!!! TTTCTGTTTTGATTTTATTT+GGG + chr4_1:52759717-52759736 Msa0555020:intron 15.0%
!!! GAGTTTTTATGTATATTTAT+AGG + chr4_1:52760399-52760418 Msa0555020:intron 15.0%
!! TATATTTATAGGTTAATTGA+TGG + chr4_1:52760410-52760429 Msa0555020:intron 15.0%
!! ATATTTATAGGTTAATTGAT+GGG + chr4_1:52760411-52760430 Msa0555020:intron 15.0%
!! CTTAATATAAACATAAATGA+AGG + chr4_1:52760463-52760482 Msa0555020:intron 15.0%
!!! TTAGTTATATTAGTTTAATC+AGG + chr4_1:52760964-52760983 Msa0555020:intron 15.0%
!! TTTATTAACAACAGAATTTA+AGG + chr4_1:52761161-52761180 Msa0555020:intron 15.0%
!!! AAATGTTTCTTTTAGAATTT+GGG + chr4_1:52761285-52761304 Msa0555020:intron 15.0%
!!! TGATACTATTTTAAAATTTG+AGG + chr4_1:52761520-52761539 Msa0555020:intron 15.0%
!! ATTAAAAGAAATGAGAATAT+GGG - chr4_1:52762907-52762926 None:intergenic 15.0%
!! ATAGAAATAAAACTGAAAAA+AGG - chr4_1:52763029-52763048 None:intergenic 15.0%
!!! TTTTTTCAGTTTTATTTCTA+TGG + chr4_1:52763028-52763047 Msa0555020:intron 15.0%
!! GTCAAAAAAAAAAATCTTTA+TGG - chr4_1:52764253-52764272 None:intergenic 15.0%
!!! CATATTTTAATATTTATGGT+AGG + chr4_1:52764361-52764380 Msa0555020:intron 15.0%
!!! TATAACTAATACTTTTATGA+AGG + chr4_1:52764629-52764648 Msa0555020:intron 15.0%
!!! TTACATTGTTTTATTCAATT+AGG + chr4_1:52765105-52765124 Msa0555020:intron 15.0%
!! ATTCATATAGTGAATTATTT+CGG + chr4_1:52766707-52766726 Msa0555020:intron 15.0%
!! GTTATAAAGATATATAAGTT+TGG - chr4_1:52767187-52767206 None:intergenic 15.0%
!! CAAAATATCTTAAAATATCT+TGG + chr4_1:52767348-52767367 Msa0555020:intron 15.0%
!!! AGAAAATTGATAATATGAAT+AGG - chr4_1:52767462-52767481 None:intergenic 15.0%
!! CAATATATTTATTTAGTAGA+TGG + chr4_1:52768278-52768297 Msa0555020:three_prime_UTR 15.0%
!!! TAATCCTTTTTAATTTCTCT+AGG + chr4_1:52754277-52754296 Msa0555020:intron 20.0%
!!! AATCCTTTTTAATTTCTCTA+GGG + chr4_1:52754278-52754297 Msa0555020:intron 20.0%
!!! TTTGTTAAGTTCTTTTAGAA+AGG + chr4_1:52754793-52754812 Msa0555020:intron 20.0%
!!! TGCATTTGGTATTATAATTT+TGG + chr4_1:52754865-52754884 Msa0555020:intron 20.0%
!! TCTAATCTAAATCCTTTAAA+GGG - chr4_1:52755072-52755091 None:intergenic 20.0%
!! TTTAAAGGATTTAGATTAGA+GGG + chr4_1:52755072-52755091 Msa0555020:intron 20.0%
!! GAATATAAACAACATTGAAA+AGG - chr4_1:52755172-52755191 None:intergenic 20.0%
!! CCAATTTATAAATATCTTTC+AGG - chr4_1:52755569-52755588 None:intergenic 20.0%
!! CCTGAAAGATATTTATAAAT+TGG + chr4_1:52755566-52755585 Msa0555020:intron 20.0%
!!! AACATCTTATAATTTGTCTT+CGG - chr4_1:52755637-52755656 None:intergenic 20.0%
!! TACTCTTAGAAATTTGTATT+GGG - chr4_1:52755855-52755874 None:intergenic 20.0%
!!! TTTCTTTAAAGTTACTTTTG+TGG + chr4_1:52756287-52756306 Msa0555020:intron 20.0%
!!! GATTCAAATGTTTTGTAATT+TGG + chr4_1:52756504-52756523 Msa0555020:intron 20.0%
!! ACGAATAGTAATTTAAATGT+TGG - chr4_1:52756700-52756719 None:intergenic 20.0%
!!! TACTATTCGTTATTTGATTT+AGG + chr4_1:52756710-52756729 Msa0555020:intron 20.0%
!! ATATGTTATAGCAGTTATTA+AGG - chr4_1:52757031-52757050 None:intergenic 20.0%
!!! AAAAGGTACAAAATTATTGT+TGG - chr4_1:52757217-52757236 None:intergenic 20.0%
!! ATTATGATGACAATCATAAA+AGG - chr4_1:52757234-52757253 None:intergenic 20.0%
!! TACAATTATAATTGGCAAAT+TGG + chr4_1:52757333-52757352 Msa0555020:intron 20.0%
!!! CAAAACTTTTTTGTCATTTT+AGG - chr4_1:52757500-52757519 None:intergenic 20.0%
!!! ATTTTCAAATACAGAAAACA+AGG + chr4_1:52757628-52757647 Msa0555020:intron 20.0%
!! ATAGGCTATAATTATAGATA+CGG - chr4_1:52757993-52758012 None:intergenic 20.0%
!!! TTTCATATTTTGATTGTGTT+GGG - chr4_1:52758216-52758235 None:intergenic 20.0%
!!! TTTTCATATTTTGATTGTGT+TGG - chr4_1:52758217-52758236 None:intergenic 20.0%
!!! GCTTTAACTTTCAAATTTAA+GGG - chr4_1:52758724-52758743 None:intergenic 20.0%
!!! AGCTTTAACTTTCAAATTTA+AGG - chr4_1:52758725-52758744 None:intergenic 20.0%
!! TTAAATTTGAAAGTTAAAGC+TGG + chr4_1:52758724-52758743 Msa0555020:CDS 20.0%
!!! TGTTTTGATTTTTTATGTTG+TGG + chr4_1:52759204-52759223 Msa0555020:intron 20.0%
!! TAATTAGAAAGCTAAAAAGA+TGG - chr4_1:52759287-52759306 None:intergenic 20.0%
!!! CGTAAATCAAATTGTATTTT+AGG + chr4_1:52759330-52759349 Msa0555020:intron 20.0%
!! TACATTTATTCATGATTAAC+AGG + chr4_1:52759518-52759537 Msa0555020:intron 20.0%
!!! AATTATTTTAAGATGTTGGA+AGG + chr4_1:52759645-52759664 Msa0555020:CDS 20.0%
!!! GTTTTCTATATTTTAACAAG+CGG + chr4_1:52760338-52760357 Msa0555020:intron 20.0%
!! TATTTATAGGTTAATTGATG+GGG + chr4_1:52760412-52760431 Msa0555020:intron 20.0%
!! CAGCAATAAAAATAGATTAT+GGG - chr4_1:52760583-52760602 None:intergenic 20.0%
!!! AAAGCTTATTTTAGATTTGT+TGG + chr4_1:52760776-52760795 Msa0555020:intron 20.0%
!!! AAGCTTATTTTAGATTTGTT+GGG + chr4_1:52760777-52760796 Msa0555020:intron 20.0%
!!! TATTAGTTTAATCAGGTTAA+TGG + chr4_1:52760971-52760990 Msa0555020:intron 20.0%
!!! AAATTTAATTTCTTTCTTGC+AGG + chr4_1:52761047-52761066 Msa0555020:intron 20.0%
!!! AATTTAATTTCTTTCTTGCA+GGG + chr4_1:52761048-52761067 Msa0555020:intron 20.0%
!!! CAAATGTTTCTTTTAGAATT+TGG + chr4_1:52761284-52761303 Msa0555020:intron 20.0%
!! AATACGAAGGAAAAAAAAAA+AGG - chr4_1:52761933-52761952 None:intergenic 20.0%
!!! AATCATTTAGTTTTTTCAAC+AGG - chr4_1:52762482-52762501 None:intergenic 20.0%
!! TTTATGAGAATGTTATGTTA+TGG + chr4_1:52762768-52762787 Msa0555020:intron 20.0%
!! TTATGAGAATGTTATGTTAT+GGG + chr4_1:52762769-52762788 Msa0555020:intron 20.0%
!!! TGTTTTATAAAATCATGCAA+AGG + chr4_1:52762811-52762830 Msa0555020:intron 20.0%
!! GATTAAAAGAAATGAGAATA+TGG - chr4_1:52762908-52762927 None:intergenic 20.0%
!!! TTTTATTTCTATGGTGTATT+TGG + chr4_1:52763037-52763056 Msa0555020:CDS 20.0%
!! TTATTGAGTGAAATTTATGT+GGG - chr4_1:52763526-52763545 None:intergenic 20.0%
!! AAAAGATAAAGGTTATTCTA+GGG + chr4_1:52763892-52763911 Msa0555020:intron 20.0%
!! ATTGGAAAAAAAAAAACTGT+TGG + chr4_1:52763982-52764001 Msa0555020:intron 20.0%
!! TTGGAAAAAAAAAAACTGTT+GGG + chr4_1:52763983-52764002 Msa0555020:intron 20.0%
!!! ATGTCATTGTTATTATGAAA+AGG - chr4_1:52764056-52764075 None:intergenic 20.0%
!! CAATGACATATATTAAAACA+TGG + chr4_1:52764067-52764086 Msa0555020:intron 20.0%
!! CAAGACAAAATTTCTATTTA+TGG + chr4_1:52764198-52764217 Msa0555020:intron 20.0%
!!! ATTTTACGATCAATGTTTTA+AGG - chr4_1:52764227-52764246 None:intergenic 20.0%
!!! AAAGTATTAGTTATAAAAGC+AGG - chr4_1:52764624-52764643 None:intergenic 20.0%
!!! CTTTTATGAAGGAAAAAAAA+AGG + chr4_1:52764640-52764659 Msa0555020:intron 20.0%
!! ATCAATTAACTAGAACTATT+GGG - chr4_1:52764942-52764961 None:intergenic 20.0%
!! AATCAATTAACTAGAACTAT+TGG - chr4_1:52764943-52764962 None:intergenic 20.0%
!! TTGAATAAAACAATGTAAGA+GGG - chr4_1:52765103-52765122 None:intergenic 20.0%
!! ATTGAATAAAACAATGTAAG+AGG - chr4_1:52765104-52765123 None:intergenic 20.0%
!!! TATCAATTTAACTCTAAGAT+TGG + chr4_1:52765541-52765560 Msa0555020:CDS 20.0%
!!! ATAAACTAATTTGTTGTTCT+AGG + chr4_1:52765756-52765775 Msa0555020:intron 20.0%
!!! TAAACTAATTTGTTGTTCTA+GGG + chr4_1:52765757-52765776 Msa0555020:intron 20.0%
!!! CATTAATTTTCTTTTGTAGT+AGG + chr4_1:52765973-52765992 Msa0555020:intron 20.0%
!!! TGAACATTTTCTTCTTAAAT+GGG - chr4_1:52766496-52766515 None:intergenic 20.0%
!!! ATGAACATTTTCTTCTTAAA+TGG - chr4_1:52766497-52766516 None:intergenic 20.0%
!!! CCATTTTCTTTTTTTTTGTT+TGG - chr4_1:52766670-52766689 None:intergenic 20.0%
!! CCAAACAAAAAAAAAGAAAA+TGG + chr4_1:52766667-52766686 Msa0555020:intron 20.0%
!!! TTTATATTTTGTCTGATAAG+CGG + chr4_1:52768214-52768233 Msa0555020:three_prime_UTR 20.0%
! AAAAGGATTAAGTTAGTTAC+CGG - chr4_1:52754267-52754286 None:intergenic 25.0%
! AAACCCTAGAGAAATTAAAA+AGG - chr4_1:52754284-52754303 None:intergenic 25.0%
! TGTGTCAAACATATATAAGT+CGG - chr4_1:52754560-52754579 None:intergenic 25.0%
! TAGGATTGGATAAATGTAAT+TGG - chr4_1:52754914-52754933 None:intergenic 25.0%
! AAATGAACATGAGAAAATGA+AGG - chr4_1:52755048-52755067 None:intergenic 25.0%
! CTCTAATCTAAATCCTTTAA+AGG - chr4_1:52755073-52755092 None:intergenic 25.0%
!! CTTTAAAGGATTTAGATTAG+AGG + chr4_1:52755071-52755090 Msa0555020:intron 25.0%
! GTGAAAGTAAGTTATGTTAA+AGG - chr4_1:52755150-52755169 None:intergenic 25.0%
! GAAAAGATATCACAAATGTT+CGG + chr4_1:52755246-52755265 Msa0555020:CDS 25.0%
!!! TCACTTATACATACTTTTTC+AGG - chr4_1:52755786-52755805 None:intergenic 25.0%
! GTACTCTTAGAAATTTGTAT+TGG - chr4_1:52755856-52755875 None:intergenic 25.0%
!!! TAAGAGTACCCATTTTTATT+TGG + chr4_1:52755867-52755886 Msa0555020:intron 25.0%
! AAGCTGAACCAAATAAAAAT+GGG - chr4_1:52755878-52755897 None:intergenic 25.0%
! AAAGCTGAACCAAATAAAAA+TGG - chr4_1:52755879-52755898 None:intergenic 25.0%
!! AATTTAACATCAAGCTCTAA+TGG - chr4_1:52755937-52755956 None:intergenic 25.0%
! AAATGAATAACCATCTTACA+TGG - chr4_1:52756252-52756271 None:intergenic 25.0%
! GTGTATATTAATGGAACATA+TGG + chr4_1:52756397-52756416 Msa0555020:intron 25.0%
! AGTAATTTAAATGTTGGTCA+TGG - chr4_1:52756694-52756713 None:intergenic 25.0%
!!! TTTTTTTCTTTTGCATGAGA+CGG - chr4_1:52756949-52756968 None:intergenic 25.0%
!!! AGTCATTTGACTTTTGTAAT+TGG + chr4_1:52757261-52757280 Msa0555020:intron 25.0%
! ATCAGTTAAATTCAGTTACA+AGG - chr4_1:52757384-52757403 None:intergenic 25.0%
!!! CAAAAAAGTTTTGATGTTGT+TGG + chr4_1:52757507-52757526 Msa0555020:intron 25.0%
! CAGTTTATATATGGAAGAAA+TGG + chr4_1:52757584-52757603 Msa0555020:intron 25.0%
!! AAATGGTTAGTTACTAAGTT+GGG + chr4_1:52757601-52757620 Msa0555020:intron 25.0%
! GATTATATGCAATATAGGAT+TGG + chr4_1:52757928-52757947 Msa0555020:intron 25.0%
! TAGGCTATAATTATAGATAC+GGG - chr4_1:52757992-52758011 None:intergenic 25.0%
! TATAATTATAGCCTATTACC+AGG + chr4_1:52757997-52758016 Msa0555020:intron 25.0%
! ATAATTATAGCCTATTACCA+GGG + chr4_1:52757998-52758017 Msa0555020:intron 25.0%
! AGGATATAACTATATTGTGT+TGG + chr4_1:52758355-52758374 Msa0555020:intron 25.0%
!! GCTCATTTTATATATACATG+TGG + chr4_1:52758464-52758483 Msa0555020:intron 25.0%
!! CATTTTATATATACATGTGG+CGG + chr4_1:52758467-52758486 Msa0555020:intron 25.0%
! TACCATATTGATGGAAATTA+AGG + chr4_1:52758642-52758661 Msa0555020:CDS 25.0%
! AAACCTAGCATTATATTATG+AGG - chr4_1:52758868-52758887 None:intergenic 25.0%
! CTAGGTTTATTGATATTTGA+GGG + chr4_1:52758880-52758899 Msa0555020:intron 25.0%
! ATAACATCATGAATAACAAG+CGG - chr4_1:52758963-52758982 None:intergenic 25.0%
!! TTTCATATTTTTCTGTGTTG+TGG + chr4_1:52759042-52759061 Msa0555020:intron 25.0%
! ATTCAAAGCTCTATTTAAGA+AGG - chr4_1:52759083-52759102 None:intergenic 25.0%
! TTCAAAAATGGTATACAAGA+TGG - chr4_1:52759161-52759180 None:intergenic 25.0%
! TCTCTTTCAAACTTCAAAAA+TGG - chr4_1:52759173-52759192 None:intergenic 25.0%
! TACGTTTGCAAAAGAAAAAA+GGG - chr4_1:52759314-52759333 None:intergenic 25.0%
! TTACGTTTGCAAAAGAAAAA+AGG - chr4_1:52759315-52759334 None:intergenic 25.0%
! TACTAAATCAAATTACCCAA+GGG - chr4_1:52759735-52759754 None:intergenic 25.0%
! TGAATTTCACATAGTGAATT+AGG - chr4_1:52760060-52760079 None:intergenic 25.0%
! AACTGTCAATAAAAGACATA+TGG + chr4_1:52760215-52760234 Msa0555020:intron 25.0%
! ACTGTCAATAAAAGACATAT+GGG + chr4_1:52760216-52760235 Msa0555020:intron 25.0%
! ATAAATGAAGGTCAATGTTA+TGG + chr4_1:52760475-52760494 Msa0555020:intron 25.0%
! ATTATGGGAATAAGACATAA+AGG - chr4_1:52760568-52760587 None:intergenic 25.0%
! GCAGCAATAAAAATAGATTA+TGG - chr4_1:52760584-52760603 None:intergenic 25.0%
!!! CTTTGATGTATTTTAGAATG+TGG - chr4_1:52760760-52760779 None:intergenic 25.0%
!! GCAATTATCTCTTTTTACAA+AGG + chr4_1:52761126-52761145 Msa0555020:CDS 25.0%
!! TATCTCTTTTTACAAAGGTA+AGG + chr4_1:52761131-52761150 Msa0555020:intron 25.0%
!! TTTTATCCTATCACAAAAAG+AGG - chr4_1:52761764-52761783 None:intergenic 25.0%
!! CTTTTTGTGATAGGATAAAA+AGG + chr4_1:52761764-52761783 Msa0555020:intron 25.0%
! ATAGAAAAAAGAGAGTCAAA+AGG + chr4_1:52761789-52761808 Msa0555020:intron 25.0%
! TAGAAAAAAGAGAGTCAAAA+GGG + chr4_1:52761790-52761809 Msa0555020:intron 25.0%
!! ATTGTCTTGTAGTATTTCTA+GGG - chr4_1:52761985-52762004 None:intergenic 25.0%
!! ATTCTGAAAAGTCAAATAGA+TGG + chr4_1:52762189-52762208 Msa0555020:CDS 25.0%
!!! TGTAACATTTTTCAGATTAG+AGG + chr4_1:52762242-52762261 Msa0555020:CDS 25.0%
!!! GTAACATTTTTCAGATTAGA+GGG + chr4_1:52762243-52762262 Msa0555020:CDS 25.0%
! TCTTACAAAATTTGATTGCT+CGG + chr4_1:52762511-52762530 Msa0555020:intron 25.0%
! TGTGAATTAGTTGCATTTAT+TGG + chr4_1:52762557-52762576 Msa0555020:intron 25.0%
!!! TTAGTTGCATTTATTGGTTT+TGG + chr4_1:52762563-52762582 Msa0555020:intron 25.0%
!!! CATTTATTGGTTTTGGATTT+TGG + chr4_1:52762570-52762589 Msa0555020:intron 25.0%
!!! ATGATAATCATGCTTTAAGA+AGG + chr4_1:52762683-52762702 Msa0555020:intron 25.0%
!!! TGATAATCATGCTTTAAGAA+GGG + chr4_1:52762684-52762703 Msa0555020:intron 25.0%
!! TTCAGTTTTGCAATTAATTG+AGG + chr4_1:52762715-52762734 Msa0555020:intron 25.0%
! TATAAAATCATGCAAAGGAA+AGG + chr4_1:52762816-52762835 Msa0555020:intron 25.0%
! TTTATGGTACAAGTATGAAT+AGG - chr4_1:52762930-52762949 None:intergenic 25.0%
! TAGCTCCTTAAGTATATATA+AGG + chr4_1:52762975-52762994 Msa0555020:intron 25.0%
! GATCACCTTATATATACTTA+AGG - chr4_1:52762983-52763002 None:intergenic 25.0%
! CTTATTGAGTGAAATTTATG+TGG - chr4_1:52763527-52763546 None:intergenic 25.0%
!!! TTTTTTGGTCTTTTTCAGAA+AGG + chr4_1:52763819-52763838 Msa0555020:intron 25.0%
! GAAAAGATAAAGGTTATTCT+AGG + chr4_1:52763891-52763910 Msa0555020:intron 25.0%
! ATGAGAAAAATAAGACTTCT+TGG - chr4_1:52763941-52763960 None:intergenic 25.0%
!!! TCTTATTTTTCTCATAAACG+AGG + chr4_1:52763946-52763965 Msa0555020:intron 25.0%
!!! CTTATTTTTCTCATAAACGA+GGG + chr4_1:52763947-52763966 Msa0555020:intron 25.0%
! TAGTTATAAAAGCAGGAAAA+AGG - chr4_1:52764617-52764636 None:intergenic 25.0%
! TGATAAGTGTTTATAAAGAG+TGG - chr4_1:52764883-52764902 None:intergenic 25.0%
! ACTCTTTATAAACACTTATC+AGG + chr4_1:52764882-52764901 Msa0555020:intron 25.0%
!! TAACCAGATTTTGTGTATAT+TGG + chr4_1:52765312-52765331 Msa0555020:intron 25.0%
!! AACCAGATTTTGTGTATATT+GGG + chr4_1:52765313-52765332 Msa0555020:intron 25.0%
! ACAACTGTACATTCATATTA+AGG - chr4_1:52765475-52765494 None:intergenic 25.0%
! ATACAATCTTGTTAAAGTTC+AGG - chr4_1:52765627-52765646 None:intergenic 25.0%
! TTTCTTGAAACAAGAAAAGT+TGG - chr4_1:52765675-52765694 None:intergenic 25.0%
! ATCTAACAAACAAACAAACA+AGG - chr4_1:52765725-52765744 None:intergenic 25.0%
!!! TTTTGATTGTGTAAAAGACA+TGG + chr4_1:52765859-52765878 Msa0555020:CDS 25.0%
! GTTATTCATCAATGTTTCTT+AGG + chr4_1:52766333-52766352 Msa0555020:intron 25.0%
!!! TTTTAAATGTGGTTTTGAGA+AGG + chr4_1:52767096-52767115 Msa0555020:intron 25.0%
!! ATGCATTGTTTTCTTTAACA+AGG + chr4_1:52767273-52767292 Msa0555020:intron 25.0%
!!! TTATTATGCTTTAACTTGAG+TGG + chr4_1:52767308-52767327 Msa0555020:intron 25.0%
!!! TATTATGCTTTAACTTGAGT+GGG + chr4_1:52767309-52767328 Msa0555020:intron 25.0%
! TAAGATTAGGAATTGATCAT+AGG - chr4_1:52767393-52767412 None:intergenic 25.0%
! GAATGTAAAAACAAGCAATA+TGG - chr4_1:52767438-52767457 None:intergenic 25.0%
!!! GAGATAAAAGTGTTATTGAT+TGG - chr4_1:52767599-52767618 None:intergenic 25.0%
! AGCATGATCCTTAAAATAAT+CGG + chr4_1:52767745-52767764 Msa0555020:intron 25.0%
! AATCTTTATACAACATAGCT+CGG + chr4_1:52767893-52767912 Msa0555020:CDS 25.0%
!!! TCATTTTGAAGTTTAGGAAT+TGG - chr4_1:52767997-52768016 None:intergenic 25.0%
!!! ATACTCTCATTTTGAAGTTT+AGG - chr4_1:52768003-52768022 None:intergenic 25.0%
! ATCTGCATTTAATCTACAAA+AGG + chr4_1:52768082-52768101 Msa0555020:CDS 25.0%
! ATTTAATCTACAAAAGGAGT+GGG + chr4_1:52768088-52768107 Msa0555020:CDS 25.0%
! AATGATCATATAACCTCAAA+CGG - chr4_1:52768154-52768173 None:intergenic 25.0%
!!! ATTATCTTCAGGGTTTTATT+TGG + chr4_1:52768185-52768204 Msa0555020:three_prime_UTR 25.0%
! GCTTATCAGACAAAATATAA+AGG - chr4_1:52768215-52768234 None:intergenic 25.0%
!! AGTTTTTGCTCTATTTTGTT+CGG + chr4_1:52768432-52768451 Msa0555020:three_prime_UTR 25.0%
TGTTCAATTGTACCAGAAAT+TGG + chr4_1:52754168-52754187 Msa0555020:CDS 30.0%
! AGTTTGAATTTGAGTTCAGA+TGG + chr4_1:52754311-52754330 Msa0555020:intron 30.0%
! ACTTGGATTTAGTGACTTTT+TGG + chr4_1:52754395-52754414 Msa0555020:intron 30.0%
AAACATATATAAGTCGGATC+CGG - chr4_1:52754554-52754573 None:intergenic 30.0%
AGAGGAGGAATTAATGAATT+TGG + chr4_1:52754671-52754690 Msa0555020:CDS 30.0%
GAGGAGGAATTAATGAATTT+GGG + chr4_1:52754672-52754691 Msa0555020:CDS 30.0%
! GAATTAATGAATTTGGGACA+GGG + chr4_1:52754678-52754697 Msa0555020:CDS 30.0%
GCAGAAAATTAACGAAAACA+AGG - chr4_1:52755005-52755024 None:intergenic 30.0%
! CATGTTCATTTTCCCTTTAA+AGG + chr4_1:52755057-52755076 Msa0555020:intron 30.0%
GCATTCTCAATTACATGTTA+TGG + chr4_1:52755107-52755126 Msa0555020:intron 30.0%
! TGTTGTTTATATTCCAGAAG+CGG + chr4_1:52755178-52755197 Msa0555020:intron 30.0%
AAAAAAAGAGGTAGGCAAAA+AGG + chr4_1:52755204-52755223 Msa0555020:CDS 30.0%
AATAATGTACCGTGTCATAA+CGG - chr4_1:52755299-52755318 None:intergenic 30.0%
!!! ATGTTACAAGATGGTTTTGT+AGG + chr4_1:52755600-52755619 Msa0555020:intron 30.0%
!!! TGTTACAAGATGGTTTTGTA+GGG + chr4_1:52755601-52755620 Msa0555020:intron 30.0%
TTAGCTATACATTGTTGTGT+TGG + chr4_1:52756037-52756056 Msa0555020:intron 30.0%
TCCAAAAGATTCATCACTTT+GGG + chr4_1:52756208-52756227 Msa0555020:CDS 30.0%
ATGAAGTAAACATAGTGAAG+GGG - chr4_1:52756454-52756473 None:intergenic 30.0%
GATGAAGTAAACATAGTGAA+GGG - chr4_1:52756455-52756474 None:intergenic 30.0%
CTTCACTATGTTTACTTCAT+CGG + chr4_1:52756454-52756473 Msa0555020:intron 30.0%
! GTGTTAATATGGCAGATTTT+TGG - chr4_1:52756587-52756606 None:intergenic 30.0%
AGGAGAAATAAGGAAGTAAA+TGG - chr4_1:52757127-52757146 None:intergenic 30.0%
AATATATGTCTCGTGTATCT+AGG - chr4_1:52757147-52757166 None:intergenic 30.0%
ATCTCATAGAAAATGAAGGA+AGG - chr4_1:52757466-52757485 None:intergenic 30.0%
GAGAATCTCATAGAAAATGA+AGG - chr4_1:52757470-52757489 None:intergenic 30.0%
!!! TTTTGTCATTTTAGGGTAAC+AGG - chr4_1:52757492-52757511 None:intergenic 30.0%
! GAAATGGTTAGTTACTAAGT+TGG + chr4_1:52757600-52757619 Msa0555020:intron 30.0%
TGCTTTCGAAATACAATAAC+TGG - chr4_1:52757668-52757687 None:intergenic 30.0%
!! TTCTAAGACTAATATCTTGG+GGG - chr4_1:52757702-52757721 None:intergenic 30.0%
!! CTTCTAAGACTAATATCTTG+GGG - chr4_1:52757703-52757722 None:intergenic 30.0%
!! CCTTCTAAGACTAATATCTT+GGG - chr4_1:52757704-52757723 None:intergenic 30.0%
AAATTATCAAAAAGCTGCTG+AGG + chr4_1:52757753-52757772 Msa0555020:CDS 30.0%
!! TTAGTCTTTTTCTTTTGAGC+TGG + chr4_1:52757836-52757855 Msa0555020:intron 30.0%
! TTTTTCTTTTGAGCTGGATT+TGG + chr4_1:52757842-52757861 Msa0555020:intron 30.0%
TAATTATAGCCTATTACCAG+GGG + chr4_1:52757999-52758018 Msa0555020:intron 30.0%
ATGAAAACCAGAGAAAAAGT+TGG + chr4_1:52758230-52758249 Msa0555020:intron 30.0%
AATACTTCAGGGACAAAATT+AGG + chr4_1:52758262-52758281 Msa0555020:intron 30.0%
ATACTTCAGGGACAAAATTA+GGG + chr4_1:52758263-52758282 Msa0555020:intron 30.0%
!!! CACTACTTTTTTGCTTAAGT+CGG + chr4_1:52758304-52758323 Msa0555020:intron 30.0%
!!! ACTACTTTTTTGCTTAAGTC+GGG + chr4_1:52758305-52758324 Msa0555020:intron 30.0%
! GTTTTGCCAATGATAAATAC+TGG - chr4_1:52758393-52758412 None:intergenic 30.0%
GTATTTATCATTGGCAAAAC+TGG + chr4_1:52758393-52758412 Msa0555020:intron 30.0%
!! AATTTGATTTGCTTGATCAC+TGG + chr4_1:52758818-52758837 Msa0555020:intron 30.0%
GAACCTCATAATATAATGCT+AGG + chr4_1:52758862-52758881 Msa0555020:intron 30.0%
GCTAGGTTTATTGATATTTG+AGG + chr4_1:52758879-52758898 Msa0555020:intron 30.0%
!! ATATTTGAGGGTATCATGAA+TGG + chr4_1:52758892-52758911 Msa0555020:intron 30.0%
!! TATTTGAGGGTATCATGAAT+GGG + chr4_1:52758893-52758912 Msa0555020:intron 30.0%
AAAGCTCTATTTAAGAAGGT+GGG - chr4_1:52759079-52759098 None:intergenic 30.0%
TATAACCTGAATGATGTTAC+AGG + chr4_1:52759102-52759121 Msa0555020:intron 30.0%
ACAAGATGGAGATAATTTCA+TGG - chr4_1:52759147-52759166 None:intergenic 30.0%
AAGATGGCATAACATAATAC+AGG - chr4_1:52759271-52759290 None:intergenic 30.0%
!! ATATTGACAAGCTTTGGAAA+GGG - chr4_1:52759391-52759410 None:intergenic 30.0%
!! TATATTGACAAGCTTTGGAA+AGG - chr4_1:52759392-52759411 None:intergenic 30.0%
AACGATATATTGACAAGCTT+TGG - chr4_1:52759397-52759416 None:intergenic 30.0%
ACTAAATCAAATTACCCAAG+GGG - chr4_1:52759939-52759958 None:intergenic 30.0%
CTACTAAATCAAATTACCCA+AGG - chr4_1:52759941-52759960 None:intergenic 30.0%
! CTTGGGTAATTTGATTTAGT+AGG + chr4_1:52759939-52759958 Msa0555020:intron 30.0%
!! AGTTTCACAGTTTTGTAAGA+AGG + chr4_1:52760316-52760335 Msa0555020:intron 30.0%
ACTAGAACAGTCATTATTAG+TGG + chr4_1:52760850-52760869 Msa0555020:intron 30.0%
CTAGAACAGTCATTATTAGT+GGG + chr4_1:52760851-52760870 Msa0555020:intron 30.0%
GTGTCAAACTTATATAGTCT+AGG + chr4_1:52760889-52760908 Msa0555020:intron 30.0%
ATTGTACCTATCGTACTATT+AGG + chr4_1:52761010-52761029 Msa0555020:intron 30.0%
! TTTCCACCAACATTTTCATT+TGG + chr4_1:52761244-52761263 Msa0555020:intron 30.0%
! TATAGAGGTATGGTATGTTA+TGG - chr4_1:52761385-52761404 None:intergenic 30.0%
CATGTCCTACAACTATTATT+GGG - chr4_1:52761497-52761516 None:intergenic 30.0%
AAGCCAAAGTAGTCTTTATA+AGG - chr4_1:52761592-52761611 None:intergenic 30.0%
! TTGAAACCTCTTTTTGTGAT+AGG + chr4_1:52761755-52761774 Msa0555020:intron 30.0%
AGAAAAAAGAGAGTCAAAAG+GGG + chr4_1:52761791-52761810 Msa0555020:intron 30.0%
ATTAGAACTGAAGAATACGA+AGG - chr4_1:52761946-52761965 None:intergenic 30.0%
CATTGTCTTGTAGTATTTCT+AGG - chr4_1:52761986-52762005 None:intergenic 30.0%
TCCATGGAGATATATACTAA+TGG + chr4_1:52762137-52762156 Msa0555020:CDS 30.0%
ACCATTAGTATATATCTCCA+TGG - chr4_1:52762141-52762160 None:intergenic 30.0%
TGAAAAGTCAAATAGATGGT+GGG + chr4_1:52762193-52762212 Msa0555020:CDS 30.0%
TCAAATATTACCTTTCGTCT+AGG - chr4_1:52762332-52762351 None:intergenic 30.0%
ATTTGATTGCTCGGTTAAAA+AGG + chr4_1:52762520-52762539 Msa0555020:intron 30.0%
!!! TTTGGTTTTGAAAAGAAGAC+TGG + chr4_1:52762588-52762607 Msa0555020:intron 30.0%
TTAATTGAGGAAGTGATATC+AGG + chr4_1:52762728-52762747 Msa0555020:intron 30.0%
! AAAGGAAAGGTTTTCTACTT+AGG + chr4_1:52762829-52762848 Msa0555020:intron 30.0%
TTTCTATGGTGTATTTGGTT+TGG + chr4_1:52763042-52763061 Msa0555020:CDS 30.0%
TTGAATAAACCGGAAGTAAT+AGG - chr4_1:52763157-52763176 None:intergenic 30.0%
GTAAAGCTTCTTGAATAAAC+CGG - chr4_1:52763167-52763186 None:intergenic 30.0%
TATATCTTAATCCCAGAGAA+AGG - chr4_1:52763290-52763309 None:intergenic 30.0%
TTATTGGGTGAAATTCACAA+GGG + chr4_1:52763459-52763478 Msa0555020:intron 30.0%
ATTTGAGGGAGAAAAAGTTT+GGG - chr4_1:52763706-52763725 None:intergenic 30.0%
TATTTGAGGGAGAAAAAGTT+TGG - chr4_1:52763707-52763726 None:intergenic 30.0%
ACGTTAGAGACAATATTTGA+GGG - chr4_1:52763720-52763739 None:intergenic 30.0%
TACGTTAGAGACAATATTTG+AGG - chr4_1:52763721-52763740 None:intergenic 30.0%
AAAGACCAAAAAAACCTGTT+CGG - chr4_1:52763812-52763831 None:intergenic 30.0%
TTTCTCATGGGAAAAGATAA+AGG + chr4_1:52763881-52763900 Msa0555020:intron 30.0%
AATAAGACTTCTTGGAAATC+AGG - chr4_1:52763933-52763952 None:intergenic 30.0%
!! TTGTGAAAACTTGCTTGTTT+TGG - chr4_1:52764132-52764151 None:intergenic 30.0%
TAAATCAAGGAATCGTAACA+CGG - chr4_1:52764397-52764416 None:intergenic 30.0%
GACTTCAAATAGCTCAATAA+TGG - chr4_1:52764536-52764555 None:intergenic 30.0%
! AAAGGAGTACATATTTAGAG+AGG - chr4_1:52764599-52764618 None:intergenic 30.0%
AAAAAGGAATACATCCTTAC+TGG + chr4_1:52764656-52764675 Msa0555020:intron 30.0%
! TCTTTTCTCAAGATCTCTTA+TGG - chr4_1:52764715-52764734 None:intergenic 30.0%
AGATCTTGAGAAAAGAGTAA+GGG + chr4_1:52764719-52764738 Msa0555020:intron 30.0%
GTCTTATCTCTATTCTATGT+GGG + chr4_1:52764904-52764923 Msa0555020:intron 30.0%
TCTTATCTCTATTCTATGTG+GGG + chr4_1:52764905-52764924 Msa0555020:intron 30.0%
CATATACTATACTAGAGTAG+TGG + chr4_1:52765023-52765042 Msa0555020:intron 30.0%
AAAAAAGTTGCTCCAGAAAA+AGG + chr4_1:52765145-52765164 Msa0555020:CDS 30.0%
! AGATTTTGTGTATATTGGGT+GGG + chr4_1:52765317-52765336 Msa0555020:intron 30.0%
TCTTTGTGAAGATTACACAA+GGG - chr4_1:52765371-52765390 None:intergenic 30.0%
ATCTTTGTGAAGATTACACA+AGG - chr4_1:52765372-52765391 None:intergenic 30.0%
TGTAATCTTCACAAAGATGA+AGG + chr4_1:52765374-52765393 Msa0555020:CDS 30.0%
TACTAACATCAATGATTAGC+TGG - chr4_1:52765406-52765425 None:intergenic 30.0%
ACTGTACATTCATATTAAGG+TGG - chr4_1:52765472-52765491 None:intergenic 30.0%
! CAATTTTGTGTTCACAGAAA+TGG + chr4_1:52765808-52765827 Msa0555020:intron 30.0%
! ACACAATCAAAACCTTGTTT+AGG - chr4_1:52765851-52765870 None:intergenic 30.0%
AACGAAATTATAGAAGAACC+AGG - chr4_1:52766029-52766048 None:intergenic 30.0%
! TTTTATCCTTTTCGATAGAC+TGG + chr4_1:52766056-52766075 Msa0555020:intron 30.0%
! AAATTTTTACGTTCCATGCA+AGG + chr4_1:52766102-52766121 Msa0555020:CDS 30.0%
! GTTCAATTTTTGCTTGTTCT+TGG - chr4_1:52766312-52766331 None:intergenic 30.0%
TCATCAATGTTTCTTAGGTA+CGG + chr4_1:52766338-52766357 Msa0555020:intron 30.0%
AGCATTCCTCTACAATAATT+TGG + chr4_1:52766425-52766444 Msa0555020:CDS 30.0%
AGATCTCCAAATTATTGTAG+AGG - chr4_1:52766434-52766453 None:intergenic 30.0%
!! TGGTTTGAAGCTTTTAAATG+TGG + chr4_1:52767085-52767104 Msa0555020:intron 30.0%
TGCATATAGATGTAATGGTT+GGG - chr4_1:52767248-52767267 None:intergenic 30.0%
TTTGCTGCATATAGATGTAA+TGG - chr4_1:52767253-52767272 None:intergenic 30.0%
!! ATTATGCTTTAACTTGAGTG+GGG + chr4_1:52767310-52767329 Msa0555020:intron 30.0%
! CTAGGAGATAATCTAAGATT+AGG - chr4_1:52767406-52767425 None:intergenic 30.0%
CTAATCTTAGATTATCTCCT+AGG + chr4_1:52767404-52767423 Msa0555020:intron 30.0%
ACTTATTTACATTTCCCTCT+TGG - chr4_1:52767533-52767552 None:intergenic 30.0%
! ACTTTTATCTCATAACGAGT+TGG + chr4_1:52767608-52767627 Msa0555020:intron 30.0%
TTAAGGATCATGCTAACTTA+AGG - chr4_1:52767739-52767758 None:intergenic 30.0%
GCATGATCCTTAAAATAATC+GGG + chr4_1:52767746-52767765 Msa0555020:intron 30.0%
CATGATCCTTAAAATAATCG+GGG + chr4_1:52767747-52767766 Msa0555020:intron 30.0%
TCATTTAAGAAACTTACAGC+TGG + chr4_1:52767777-52767796 Msa0555020:intron 30.0%
AATTGATTGCTAAGCTTTAC+AGG + chr4_1:52767870-52767889 Msa0555020:intron 30.0%
ATCTTTATACAACATAGCTC+GGG + chr4_1:52767894-52767913 Msa0555020:CDS 30.0%
CATTTAATCTACAAAAGGAG+TGG + chr4_1:52768087-52768106 Msa0555020:CDS 30.0%
TTTAATCTACAAAAGGAGTG+GGG + chr4_1:52768089-52768108 Msa0555020:CDS 30.0%
ACAAACTGCAAATTATCTTC+AGG + chr4_1:52768174-52768193 Msa0555020:three_prime_UTR 30.0%
CAAACTGCAAATTATCTTCA+GGG + chr4_1:52768175-52768194 Msa0555020:three_prime_UTR 30.0%
TAGTAGATGGTTTCTGTATA+TGG + chr4_1:52768291-52768310 Msa0555020:three_prime_UTR 30.0%
AATGGAAGTGATTAACCAGA+AGG + chr4_1:52753931-52753950 Msa0555020:exon 35.0%
TTCTGGTACAATTGAACACT+GGG - chr4_1:52754166-52754185 None:intergenic 35.0%
! TTTCTGGTACAATTGAACAC+TGG - chr4_1:52754167-52754186 None:intergenic 35.0%
! TGGATTTAGTGACTTTTTGG+CGG + chr4_1:52754398-52754417 Msa0555020:intron 35.0%
!! ACTTTAAGGCAGGAAAATCA+CGG - chr4_1:52754523-52754542 None:intergenic 35.0%
TGCCTTAAAGTTAGCAAATC+CGG + chr4_1:52754532-52754551 Msa0555020:intron 35.0%
!! ATCCGGATTTGCTAACTTTA+AGG - chr4_1:52754537-52754556 None:intergenic 35.0%
! TGAAGAGACTTCTTCTAAGA+AGG + chr4_1:52754608-52754627 Msa0555020:CDS 35.0%
CAAGGGAAGATGATATTTCT+GGG + chr4_1:52754631-52754650 Msa0555020:CDS 35.0%
! AAGGGAAGATGATATTTCTG+GGG + chr4_1:52754632-52754651 Msa0555020:CDS 35.0%
! GGAATTAATGAATTTGGGAC+AGG + chr4_1:52754677-52754696 Msa0555020:CDS 35.0%
!! TATCCAATCCTAGCTTTTTC+TGG + chr4_1:52754922-52754941 Msa0555020:intron 35.0%
! GTTTCTATCTTTTACATGCC+AGG + chr4_1:52754948-52754967 Msa0555020:intron 35.0%
!! CTGCTTTAGATGTAAGCTTT+TGG + chr4_1:52755021-52755040 Msa0555020:intron 35.0%
TCTGTGGTCTAACAATCTAT+AGG + chr4_1:52755318-52755337 Msa0555020:intron 35.0%
CGTAGTCAATTTGATGAACT+TGG - chr4_1:52755383-52755402 None:intergenic 35.0%
TAGCAAGATCAAAAGTGGAT+TGG - chr4_1:52755414-52755433 None:intergenic 35.0%
TGTTGTAGCAAGATCAAAAG+TGG - chr4_1:52755419-52755438 None:intergenic 35.0%
!! CAAAAAGCATTTCAGTAGAC+AGG - chr4_1:52755507-52755526 None:intergenic 35.0%
AGGCTATATATATCTGACGT+GGG - chr4_1:52755549-52755568 None:intergenic 35.0%
ACATTCCTCATGTTACAAGA+TGG + chr4_1:52755591-52755610 Msa0555020:intron 35.0%
CAAAACCATCTTGTAACATG+AGG - chr4_1:52755599-52755618 None:intergenic 35.0%
! ACATCTTTCACCTTTCAAGT+TGG + chr4_1:52755809-52755828 Msa0555020:intron 35.0%
!!! ACCTTTCAAGTTGGTTTTGT+AGG + chr4_1:52755818-52755837 Msa0555020:intron 35.0%
!!! CCTTTCAAGTTGGTTTTGTA+GGG + chr4_1:52755819-52755838 Msa0555020:intron 35.0%
TTGGTTCAGCTTTCATTAAG+CGG + chr4_1:52755886-52755905 Msa0555020:intron 35.0%
!!! TGTTGTGTTGGCTTTTTTGT+AGG + chr4_1:52756049-52756068 Msa0555020:intron 35.0%
TGGGGATCATGAAAATGAAA+TGG + chr4_1:52756157-52756176 Msa0555020:CDS 35.0%
GGGGATCATGAAAATGAAAT+GGG + chr4_1:52756158-52756177 Msa0555020:CDS 35.0%
CTCCAAAAGATTCATCACTT+TGG + chr4_1:52756207-52756226 Msa0555020:CDS 35.0%
! TCCCAAAGTGATGAATCTTT+TGG - chr4_1:52756212-52756231 None:intergenic 35.0%
! AAGATTCATCACTTTGGGAA+AGG + chr4_1:52756213-52756232 Msa0555020:CDS 35.0%
GTGTGTACGGTGTATATTAA+TGG + chr4_1:52756388-52756407 Msa0555020:intron 35.0%
!!! ACATAGTGAAGGGGTATTTT+CGG - chr4_1:52756445-52756464 None:intergenic 35.0%
CGATGAAGTAAACATAGTGA+AGG - chr4_1:52756456-52756475 None:intergenic 35.0%
GTACTCAGTTGAATTCAAAG+AGG - chr4_1:52756860-52756879 None:intergenic 35.0%
!! GATAATTGTAGGGGGTATTT+GGG - chr4_1:52756988-52757007 None:intergenic 35.0%
TCGTGTATCTAGGAGAAATA+AGG - chr4_1:52757137-52757156 None:intergenic 35.0%
!! CCCAAGATATTAGTCTTAGA+AGG + chr4_1:52757701-52757720 Msa0555020:CDS 35.0%
!! GCCTTCTAAGACTAATATCT+TGG - chr4_1:52757705-52757724 None:intergenic 35.0%
TCCATTATATAGCATCAGAG+AGG - chr4_1:52757954-52757973 None:intergenic 35.0%
!! TTGAGTTGGCATTATTGTAG+TGG + chr4_1:52758022-52758041 Msa0555020:intron 35.0%
! TGAGTTGGCATTATTGTAGT+GGG + chr4_1:52758023-52758042 Msa0555020:intron 35.0%
! AAACATCACCTTTTCCCAAA+TGG - chr4_1:52758052-52758071 None:intergenic 35.0%
TAGTGACTCAAGCAATCATA+GGG - chr4_1:52758289-52758308 None:intergenic 35.0%
!!! CTACTTTTTTGCTTAAGTCG+GGG + chr4_1:52758306-52758325 Msa0555020:intron 35.0%
!!! AAAACTGGTTTTTCTTCTGC+TGG + chr4_1:52758408-52758427 Msa0555020:intron 35.0%
! CACACTTTTGGTAGAACTAA+AGG - chr4_1:52758534-52758553 None:intergenic 35.0%
!! CTTTAGTTCTACCAAAAGTG+TGG + chr4_1:52758532-52758551 Msa0555020:intron 35.0%
TATCTGAAGAGTAAACCAGA+TGG + chr4_1:52758589-52758608 Msa0555020:CDS 35.0%
TCTACTTGGTACCATATTGA+TGG + chr4_1:52758633-52758652 Msa0555020:CDS 35.0%
CGCCTTAATTTCCATCAATA+TGG - chr4_1:52758647-52758666 None:intergenic 35.0%
GTTCATAGAACAATCTCAAG+TGG + chr4_1:52758684-52758703 Msa0555020:CDS 35.0%
ATAGAACAATCTCAAGTGGT+TGG + chr4_1:52758688-52758707 Msa0555020:CDS 35.0%
TAGAACAATCTCAAGTGGTT+GGG + chr4_1:52758689-52758708 Msa0555020:CDS 35.0%
!! ATCATGAATGGGTATTGAGT+TGG + chr4_1:52758904-52758923 Msa0555020:intron 35.0%
!! TCATGAATGGGTATTGAGTT+GGG + chr4_1:52758905-52758924 Msa0555020:intron 35.0%
!! TTGGAAGTGCTATACTTCAT+GGG - chr4_1:52758987-52759006 None:intergenic 35.0%
!! TTTGGAAGTGCTATACTTCA+TGG - chr4_1:52758988-52759007 None:intergenic 35.0%
CAAAGCTCTATTTAAGAAGG+TGG - chr4_1:52759080-52759099 None:intergenic 35.0%
TGTTACCTGTAACATCATTC+AGG - chr4_1:52759110-52759129 None:intergenic 35.0%
ATGGCATAACATAATACAGG+AGG - chr4_1:52759268-52759287 None:intergenic 35.0%
!! TATTGACAAGCTTTGGAAAG+GGG - chr4_1:52759390-52759409 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr4_1:52759844-52759863 None:intergenic 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr4_1:52759844-52759863 Msa0555020:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG - chr4_1:52759849-52759868 None:intergenic 35.0%
AAGCCTCTTGTGTAAAAAAC+AGG - chr4_1:52759850-52759869 None:intergenic 35.0%
CTAAATCAAATTACCCAAGG+GGG - chr4_1:52759938-52759957 None:intergenic 35.0%
! ATTAATAGGTTGCAGGCTTT+TGG + chr4_1:52760191-52760210 Msa0555020:intron 35.0%
! TTAATAGGTTGCAGGCTTTT+GGG + chr4_1:52760192-52760211 Msa0555020:intron 35.0%
ACCATCAATCTTGCCAAAAT+TGG - chr4_1:52760267-52760286 None:intergenic 35.0%
CTCAATGTCACTACACATAA+AGG - chr4_1:52760382-52760401 None:intergenic 35.0%
! GTTAATTGATGGGGAGTATA+AGG + chr4_1:52760421-52760440 Msa0555020:intron 35.0%
AAAGGACAAACTGCTAAATG+GGG - chr4_1:52760545-52760564 None:intergenic 35.0%
GAAAGGACAAACTGCTAAAT+GGG - chr4_1:52760546-52760565 None:intergenic 35.0%
GGGAATAAGACATAAAGGAA+AGG - chr4_1:52760563-52760582 None:intergenic 35.0%
! TATCATTGTCGACAGTCTTT+TGG + chr4_1:52760608-52760627 Msa0555020:intron 35.0%
!!! CATACAAAGTTGGTTTTGTG+TGG + chr4_1:52760721-52760740 Msa0555020:intron 35.0%
GATTGACCTAATAGTACGAT+AGG - chr4_1:52761019-52761038 None:intergenic 35.0%
TCGTGTATTGCAAAACAAGA+GGG - chr4_1:52761212-52761231 None:intergenic 35.0%
TTCGTGTATTGCAAAACAAG+AGG - chr4_1:52761213-52761232 None:intergenic 35.0%
! AACCCTTATATCGACTACTT+TGG + chr4_1:52761359-52761378 Msa0555020:intron 35.0%
TGAGCATAAGTATAGAGGTA+TGG - chr4_1:52761395-52761414 None:intergenic 35.0%
ATACCTCTATACTTATGCTC+AGG + chr4_1:52761394-52761413 Msa0555020:intron 35.0%
GATGACCCAATAATAGTTGT+AGG + chr4_1:52761489-52761508 Msa0555020:intron 35.0%
GCATGTCCTACAACTATTAT+TGG - chr4_1:52761498-52761517 None:intergenic 35.0%
! AGGCCTTATAAAGACTACTT+TGG + chr4_1:52761586-52761605 Msa0555020:intron 35.0%
ACGAAACTCAAAGATGTTGT+TGG - chr4_1:52761645-52761664 None:intergenic 35.0%
! TTCGTTACCAACCTTTTTCT+TGG + chr4_1:52761660-52761679 Msa0555020:intron 35.0%
! TCGTTACCAACCTTTTTCTT+GGG + chr4_1:52761661-52761680 Msa0555020:intron 35.0%
GAAAAAAGAGAGTCAAAAGG+GGG + chr4_1:52761792-52761811 Msa0555020:intron 35.0%
TTACAAGTACCAGAATCCTT+TGG - chr4_1:52762086-52762105 None:intergenic 35.0%
TTGTGATCAAAGTTCTTCCA+TGG + chr4_1:52762121-52762140 Msa0555020:CDS 35.0%
GGAGATATATACTAATGGTG+AGG + chr4_1:52762142-52762161 Msa0555020:CDS 35.0%
CTGAAAAGTCAAATAGATGG+TGG + chr4_1:52762192-52762211 Msa0555020:CDS 35.0%
GTTGAACATAGATATACGAG+TGG + chr4_1:52762415-52762434 Msa0555020:intron 35.0%
! TAGTGAAAGTGTGAAACCTA+AGG + chr4_1:52762657-52762676 Msa0555020:intron 35.0%
GCATGATTATCATCAACCTT+AGG - chr4_1:52762676-52762695 None:intergenic 35.0%
! AGGAAGTGATATCAGGTTTT+TGG + chr4_1:52762735-52762754 Msa0555020:intron 35.0%
TGAGAATGTTATGTTATGGG+TGG + chr4_1:52762772-52762791 Msa0555020:intron 35.0%
ATGGAAGCTGTTGAAGTTTA+TGG - chr4_1:52762946-52762965 None:intergenic 35.0%
AAACTTCAACAGCTTCCATT+TGG + chr4_1:52762947-52762966 Msa0555020:intron 35.0%
! TTGTGATGGCATTGAGTTTA+TGG + chr4_1:52763119-52763138 Msa0555020:CDS 35.0%
TTGAGTTTATGGTCTCTCTT+TGG + chr4_1:52763130-52763149 Msa0555020:intron 35.0%
! AATCCCAGAGAAAGGTTTTA+GGG - chr4_1:52763282-52763301 None:intergenic 35.0%
! TAATCCCAGAGAAAGGTTTT+AGG - chr4_1:52763283-52763302 None:intergenic 35.0%
!! ATTTTGGGAGCTTAAGCTTT+TGG + chr4_1:52763364-52763383 Msa0555020:intron 35.0%
CTTATTGGGTGAAATTCACA+AGG + chr4_1:52763458-52763477 Msa0555020:intron 35.0%
TGGGTATTACCACTTAATGA+GGG - chr4_1:52763507-52763526 None:intergenic 35.0%
CATGTTGCACAAGAATTTAG+GGG - chr4_1:52763682-52763701 None:intergenic 35.0%
GCATGTTGCACAAGAATTTA+GGG - chr4_1:52763683-52763702 None:intergenic 35.0%
TTTGAGGGAGAAAAAGTTTG+GGG - chr4_1:52763705-52763724 None:intergenic 35.0%
!! TTTTTCAGAAAGGCTTGTTC+TGG + chr4_1:52763829-52763848 Msa0555020:intron 35.0%
!! TTTTCAGAAAGGCTTGTTCT+GGG + chr4_1:52763830-52763849 Msa0555020:intron 35.0%
TGGGAAGCAAATATTTCTCA+TGG + chr4_1:52763868-52763887 Msa0555020:intron 35.0%
GGGAAGCAAATATTTCTCAT+GGG + chr4_1:52763869-52763888 Msa0555020:intron 35.0%
! TTTTCTCATAAACGAGGGAA+AGG + chr4_1:52763952-52763971 Msa0555020:intron 35.0%
! AGCAAGTTTTCACAAAACAG+AGG + chr4_1:52764137-52764156 Msa0555020:intron 35.0%
GAAGTCAAGATCGTAAATCA+AGG - chr4_1:52764410-52764429 None:intergenic 35.0%
TGATTTACGATCTTGACTTC+TGG + chr4_1:52764410-52764429 Msa0555020:intron 35.0%
AGTTGTATTTGCAACACTGA+AGG - chr4_1:52764463-52764482 None:intergenic 35.0%
GAGATCTTGAGAAAAGAGTA+AGG + chr4_1:52764718-52764737 Msa0555020:intron 35.0%
CGAAATACGCTATTTGTTTC+TGG - chr4_1:52764756-52764775 None:intergenic 35.0%
GAAACAAATAGCGTATTTCG+AGG + chr4_1:52764756-52764775 Msa0555020:intron 35.0%
AGATCAGATGATGAGGTTAT+GGG - chr4_1:52764789-52764808 None:intergenic 35.0%
! CATTTCCAATTGTACTGATC+TGG + chr4_1:52764839-52764858 Msa0555020:intron 35.0%
ACAAACCAGATCAGTACAAT+TGG - chr4_1:52764847-52764866 None:intergenic 35.0%
! TGTACTGATCTGGTTTGTAA+TGG + chr4_1:52764849-52764868 Msa0555020:intron 35.0%
! GTACTGATCTGGTTTGTAAT+GGG + chr4_1:52764850-52764869 Msa0555020:intron 35.0%
! GGTCTTATCTCTATTCTATG+TGG + chr4_1:52764903-52764922 Msa0555020:intron 35.0%
CACCCAATATACACAAAATC+TGG - chr4_1:52765318-52765337 None:intergenic 35.0%
! CAGATTTTGTGTATATTGGG+TGG + chr4_1:52765316-52765335 Msa0555020:intron 35.0%
!! ACTAATTTGTTGTTCTAGGG+TGG + chr4_1:52765760-52765779 Msa0555020:intron 35.0%
!! CTAATTTGTTGTTCTAGGGT+GGG + chr4_1:52765761-52765780 Msa0555020:intron 35.0%
! AAAACCTTGTTTAGGATCTG+TGG - chr4_1:52765843-52765862 None:intergenic 35.0%
ATTTGTCATGCCTTGTATCT+CGG - chr4_1:52766086-52766105 None:intergenic 35.0%
! ATCGACAAATTTTCCTTGCA+TGG - chr4_1:52766118-52766137 None:intergenic 35.0%
! AGATTAACCAATGGATTCTC+AGG - chr4_1:52766237-52766256 None:intergenic 35.0%
! CCATTGGTTAATCTTTGTGT+CGG + chr4_1:52766243-52766262 Msa0555020:CDS 35.0%
TTTCTTCTTAAATGGGCACA+AGG - chr4_1:52766489-52766508 None:intergenic 35.0%
CTTGGTCATAGATGTAATGT+TGG + chr4_1:52766769-52766788 Msa0555020:intron 35.0%
AGAATGATCATCTTGGACAA+TGG - chr4_1:52766828-52766847 None:intergenic 35.0%
! ATTCTGACGATGACTTTTGT+TGG + chr4_1:52766843-52766862 Msa0555020:intron 35.0%
!! ACGATGACTTTTGTTGGTTA+TGG + chr4_1:52766849-52766868 Msa0555020:intron 35.0%
!! CGATGACTTTTGTTGGTTAT+GGG + chr4_1:52766850-52766869 Msa0555020:intron 35.0%
!! TTTTGTTGGTTATGGGCTTA+TGG + chr4_1:52766857-52766876 Msa0555020:intron 35.0%
TAAAACTGCTTCTGGTACAA+AGG - chr4_1:52767060-52767079 None:intergenic 35.0%
CTGCATATAGATGTAATGGT+TGG - chr4_1:52767249-52767268 None:intergenic 35.0%
!! TTATGCTTTAACTTGAGTGG+GGG + chr4_1:52767311-52767330 Msa0555020:intron 35.0%
GCAATATGGAAGATAATCCT+AGG - chr4_1:52767424-52767443 None:intergenic 35.0%
GTAAAAACTATCACCACTAG+CGG + chr4_1:52767551-52767570 Msa0555020:intron 35.0%
TGTTGACCAATCACTGTTAT+CGG + chr4_1:52767648-52767667 Msa0555020:intron 35.0%
!! AAGCTACCCCGATTATTTTA+AGG - chr4_1:52767756-52767775 None:intergenic 35.0%
GGCAGCAATATATTATGAGA+AGG + chr4_1:52767945-52767964 Msa0555020:CDS 35.0%
! ATGAGAAGGTGATTGCTATT+AGG + chr4_1:52767959-52767978 Msa0555020:CDS 35.0%
! TGAGAAGGTGATTGCTATTA+GGG + chr4_1:52767960-52767979 Msa0555020:CDS 35.0%
GTCATTGAAAATCACAAACC+TGG + chr4_1:52768027-52768046 Msa0555020:CDS 35.0%
AAAGATCATTGTTCCGTTTG+AGG + chr4_1:52768138-52768157 Msa0555020:CDS 35.0%
AGATGGTTTCTGTATATGGT+TGG + chr4_1:52768295-52768314 Msa0555020:three_prime_UTR 35.0%
GAGAATGAAGAAGAAGAGGA+AGG + chr4_1:52754061-52754080 Msa0555020:CDS 40.0%
! GAGGAAGATCAATTCAGGTT+CGG + chr4_1:52754100-52754119 Msa0555020:CDS 40.0%
GATTAAGTTAGTTACCGGTG+AGG - chr4_1:52754262-52754281 None:intergenic 40.0%
!! CAGATGGTATGAGTGTTGAA+CGG + chr4_1:52754327-52754346 Msa0555020:intron 40.0%
ATCCAAGTCCATTAAGTCCA+TGG - chr4_1:52754383-52754402 None:intergenic 40.0%
!! GGATTTAGTGACTTTTTGGC+GGG + chr4_1:52754399-52754418 Msa0555020:intron 40.0%
!! ACTTTTTGGCGGGAAAGTTT+CGG + chr4_1:52754409-52754428 Msa0555020:intron 40.0%
!! GGATTTGCTAACTTTAAGGC+AGG - chr4_1:52754533-52754552 None:intergenic 40.0%
! AGACTTCTTCTAAGAAGGCA+AGG + chr4_1:52754613-52754632 Msa0555020:CDS 40.0%
! GACTTCTTCTAAGAAGGCAA+GGG + chr4_1:52754614-52754633 Msa0555020:CDS 40.0%
GCAAGGGAAGATGATATTTC+TGG + chr4_1:52754630-52754649 Msa0555020:CDS 40.0%
!! GAAGATGATATTTCTGGGGT+AGG + chr4_1:52754636-52754655 Msa0555020:CDS 40.0%
!! CAAGCTTTAGACTCTAGCAA+TGG + chr4_1:52754823-52754842 Msa0555020:intron 40.0%
TCTAGCAATGGAATGTGCAT+CGG + chr4_1:52754835-52754854 Msa0555020:intron 40.0%
! GCATCGGTGAATAATGCATT+TGG + chr4_1:52754851-52754870 Msa0555020:intron 40.0%
TCTCCAGAAAAAGCTAGGAT+TGG - chr4_1:52754928-52754947 None:intergenic 40.0%
GAAACTCTCCAGAAAAAGCT+AGG - chr4_1:52754933-52754952 None:intergenic 40.0%
!!! CTCTTTTTTTTGACCGCTTC+TGG - chr4_1:52755194-52755213 None:intergenic 40.0%
CAGAAGCGGTCAAAAAAAAG+AGG + chr4_1:52755192-52755211 Msa0555020:intron 40.0%
AGCGGTCAAAAAAAAGAGGT+AGG + chr4_1:52755196-52755215 Msa0555020:CDS 40.0%
TGACACGGTACATTATTCTG+TGG + chr4_1:52755302-52755321 Msa0555020:intron 40.0%
! TAGCTATGTGTTGTTGTTGG+AGG - chr4_1:52755473-52755492 None:intergenic 40.0%
! CTGTAGCTATGTGTTGTTGT+TGG - chr4_1:52755476-52755495 None:intergenic 40.0%
CAACAACAACACATAGCTAC+AGG + chr4_1:52755474-52755493 Msa0555020:intron 40.0%
CAGGCTATATATATCTGACG+TGG - chr4_1:52755550-52755569 None:intergenic 40.0%
!!! TGGTTTTGTAGGGTTGAGTT+TGG + chr4_1:52755611-52755630 Msa0555020:intron 40.0%
CACTCCAAATGTCTTGTCTT+CGG + chr4_1:52755710-52755729 Msa0555020:intron 40.0%
CCCTACAAAACCAACTTGAA+AGG - chr4_1:52755822-52755841 None:intergenic 40.0%
ATGTGTTGCATGAAGTTGTC+AGG + chr4_1:52756078-52756097 Msa0555020:CDS 40.0%
TGATACGGGTCAGGTAAATT+TGG - chr4_1:52756110-52756129 None:intergenic 40.0%
TTTGTGTGGTCCATGTAAGA+TGG + chr4_1:52756239-52756258 Msa0555020:intron 40.0%
TCACTTGTCAGTGTTGTCAA+CGG + chr4_1:52756554-52756573 Msa0555020:intron 40.0%
! GCCATATTAACACGCCATTT+TGG + chr4_1:52756594-52756613 Msa0555020:intron 40.0%
GCCAAAATGGCGTGTTAATA+TGG - chr4_1:52756598-52756617 None:intergenic 40.0%
ATCCCATCACAAACTACCTA+TGG + chr4_1:52756640-52756659 Msa0555020:intron 40.0%
TCGTTAAAGATCTGCCATGA+TGG + chr4_1:52756666-52756685 Msa0555020:intron 40.0%
AACTATATCATCCCGCAAAG+TGG - chr4_1:52756745-52756764 None:intergenic 40.0%
CAAACAACCCCTCTCATATT+TGG + chr4_1:52756800-52756819 Msa0555020:intron 40.0%
! ATTTTCTCAGAGGAAAGCCT+CGG - chr4_1:52756922-52756941 None:intergenic 40.0%
! AGACGGAACTATTTTCTCAG+AGG - chr4_1:52756932-52756951 None:intergenic 40.0%
!! GGATAATTGTAGGGGGTATT+TGG - chr4_1:52756989-52757008 None:intergenic 40.0%
ATGTGCGTGGGATAATTGTA+GGG - chr4_1:52756998-52757017 None:intergenic 40.0%
AATGTGCGTGGGATAATTGT+AGG - chr4_1:52756999-52757018 None:intergenic 40.0%
GGAGTTACATAAATGTGCGT+GGG - chr4_1:52757010-52757029 None:intergenic 40.0%
AGGAGTTACATAAATGTGCG+TGG - chr4_1:52757011-52757030 None:intergenic 40.0%
ACTTACCCACATTCTGACTT+TGG + chr4_1:52757191-52757210 Msa0555020:intron 40.0%
TACAGAAAACAAGGTGATGC+TGG + chr4_1:52757637-52757656 Msa0555020:intron 40.0%
TGCACTAAAAGAAGCAGCTA+AGG + chr4_1:52757813-52757832 Msa0555020:CDS 40.0%
GCCTCTCTGATGCTATATAA+TGG + chr4_1:52757950-52757969 Msa0555020:intron 40.0%
TTGGGAAAAGGTGATGTTTC+AGG + chr4_1:52758053-52758072 Msa0555020:intron 40.0%
AACCAGAGAAAAAGTTGGAC+TGG + chr4_1:52758235-52758254 Msa0555020:intron 40.0%
!! AACCAGTCCAACTTTTTCTC+TGG - chr4_1:52758240-52758259 None:intergenic 40.0%
!! TGGACTGGTTCAAATACTTC+AGG + chr4_1:52758250-52758269 Msa0555020:intron 40.0%
!! GGACTGGTTCAAATACTTCA+GGG + chr4_1:52758251-52758270 Msa0555020:intron 40.0%
GTAGTGACTCAAGCAATCAT+AGG - chr4_1:52758290-52758309 None:intergenic 40.0%
GATTTCACGACAAAAGTGGT+TGG - chr4_1:52758335-52758354 None:intergenic 40.0%
!! ACCACTTTTGTCGTGAAATC+AGG + chr4_1:52758335-52758354 Msa0555020:intron 40.0%
TCCTGATTTCACGACAAAAG+TGG - chr4_1:52758339-52758358 None:intergenic 40.0%
GTCCTGCCAGTATTTATCAT+TGG + chr4_1:52758384-52758403 Msa0555020:intron 40.0%
TGCCAATGATAAATACTGGC+AGG - chr4_1:52758389-52758408 None:intergenic 40.0%
ACACTTGCATTTACTCCATC+TGG - chr4_1:52758607-52758626 None:intergenic 40.0%
GCAAGTGTAGTTGATCTACT+TGG + chr4_1:52758619-52758638 Msa0555020:CDS 40.0%
CCATGTTTCCAAGATGAACA+TGG - chr4_1:52758756-52758775 None:intergenic 40.0%
CCATGTTCATCTTGGAAACA+TGG + chr4_1:52758753-52758772 Msa0555020:CDS 40.0%
CATCATGAATAACAAGCGGA+AGG - chr4_1:52758959-52758978 None:intergenic 40.0%
!! ATTGACAAGCTTTGGAAAGG+GGG - chr4_1:52759389-52759408 None:intergenic 40.0%
GTAAAAAATAAAGGGCAGCC+TGG + chr4_1:52759752-52759771 Msa0555020:intron 40.0%
CATGCAATACACCAATTGGT+GGG - chr4_1:52759818-52759837 None:intergenic 40.0%
!! TTACACAAGAGGCTTTTTCC+AGG + chr4_1:52759855-52759874 Msa0555020:intron 40.0%
!! AGGAGTAGTGGATTGGATTA+TGG - chr4_1:52760031-52760050 None:intergenic 40.0%
CATAGTGAATTAGGCTAGAG+AGG - chr4_1:52760051-52760070 None:intergenic 40.0%
AGAGATCTGCCAGGATTAAT+AGG + chr4_1:52760177-52760196 Msa0555020:intron 40.0%
! TGAGTGCTAGTTGCCAATTT+TGG + chr4_1:52760251-52760270 Msa0555020:intron 40.0%
!! GCCAATTTTGGCAAGATTGA+TGG + chr4_1:52760263-52760282 Msa0555020:intron 40.0%
AAGGACAAACTGCTAAATGG+GGG - chr4_1:52760544-52760563 None:intergenic 40.0%
GGAAAGGACAAACTGCTAAA+TGG - chr4_1:52760547-52760566 None:intergenic 40.0%
AGACTGTCGACAATGATATC+TGG - chr4_1:52760606-52760625 None:intergenic 40.0%
! ATTGTCGACAGTCTTTTGGA+GGG + chr4_1:52760612-52760631 Msa0555020:intron 40.0%
!! ACAGTCTTTTGGAGGGATAA+AGG + chr4_1:52760619-52760638 Msa0555020:intron 40.0%
!! CAGTCTTTTGGAGGGATAAA+GGG + chr4_1:52760620-52760639 Msa0555020:intron 40.0%
GCAAGCTTCACATACAAAGT+TGG + chr4_1:52760711-52760730 Msa0555020:intron 40.0%
AGTTATTGGACCACCCATTA+GGG + chr4_1:52760805-52760824 Msa0555020:intron 40.0%
GAACAGTCATTATTAGTGGG+AGG + chr4_1:52760854-52760873 Msa0555020:intron 40.0%
ATAAGTTTGACACCCGATGA+GGG - chr4_1:52760882-52760901 None:intergenic 40.0%
TATAAGTTTGACACCCGATG+AGG - chr4_1:52760883-52760902 None:intergenic 40.0%
TGCTAGATGTTATCGATCCT+TGG + chr4_1:52761089-52761108 Msa0555020:CDS 40.0%
GTTATCGATCCTTGGAAGAA+AGG + chr4_1:52761097-52761116 Msa0555020:CDS 40.0%
TGCTTGTTTCCTTTCTTCCA+AGG - chr4_1:52761109-52761128 None:intergenic 40.0%
TTGCAAAACAAGAGGGGAAT+GGG - chr4_1:52761205-52761224 None:intergenic 40.0%
ATTGCAAAACAAGAGGGGAA+TGG - chr4_1:52761206-52761225 None:intergenic 40.0%
CGTGTATTGCAAAACAAGAG+GGG - chr4_1:52761211-52761230 None:intergenic 40.0%
TCAGCGCCAAATGAAAATGT+TGG - chr4_1:52761253-52761272 None:intergenic 40.0%
GGCCAAAGTAGTCGATATAA+GGG - chr4_1:52761364-52761383 None:intergenic 40.0%
TGGCCAAAGTAGTCGATATA+AGG - chr4_1:52761365-52761384 None:intergenic 40.0%
GATCCTGAGCATAAGTATAG+AGG - chr4_1:52761400-52761419 None:intergenic 40.0%
ATGGCTAATAGTAGGCATGA+GGG - chr4_1:52761444-52761463 None:intergenic 40.0%
TATGGCTAATAGTAGGCATG+AGG - chr4_1:52761445-52761464 None:intergenic 40.0%
CATGCCTACTATTAGCCATA+TGG + chr4_1:52761445-52761464 Msa0555020:intron 40.0%
! AATCACAGAGCTAGCTTAAG+AGG + chr4_1:52761551-52761570 Msa0555020:intron 40.0%
! CGTTACCAACCTTTTTCTTG+GGG + chr4_1:52761662-52761681 Msa0555020:intron 40.0%
! GTTACCAACCTTTTTCTTGG+GGG + chr4_1:52761663-52761682 Msa0555020:intron 40.0%
AGAAAACTCCCCCAAGAAAA+AGG - chr4_1:52761674-52761693 None:intergenic 40.0%
TGTGAATGTAAGTCTCCCTT+TGG + chr4_1:52762280-52762299 Msa0555020:CDS 40.0%
TCAGAGATTCGTGTACCAAA+GGG - chr4_1:52762298-52762317 None:intergenic 40.0%
TTCAGAGATTCGTGTACCAA+AGG - chr4_1:52762299-52762318 None:intergenic 40.0%
GAATGTGCTTGTATGAAAGC+AGG - chr4_1:52762384-52762403 None:intergenic 40.0%
TAAGGAGCTAGAGAACCAAA+TGG - chr4_1:52762965-52762984 None:intergenic 40.0%
CTTATCAGTCATGAAGTGAC+TGG + chr4_1:52763002-52763021 Msa0555020:intron 40.0%
!! TGCACTTGCACTTTTTGTGA+TGG + chr4_1:52763105-52763124 Msa0555020:CDS 40.0%
CTCTTTGGTCCTATTACTTC+CGG + chr4_1:52763145-52763164 Msa0555020:intron 40.0%
TTAGAGACGTGAACACTCTA+AGG - chr4_1:52763204-52763223 None:intergenic 40.0%
CAAAGAGCTTTCATTTGAGG+TGG - chr4_1:52763231-52763250 None:intergenic 40.0%
GCTCAAAGAGCTTTCATTTG+AGG - chr4_1:52763234-52763253 None:intergenic 40.0%
CTTCCCTAAAACCTTTCTCT+GGG + chr4_1:52763276-52763295 Msa0555020:intron 40.0%
AAGACTTCGATAATGTGTGC+AGG + chr4_1:52763333-52763352 Msa0555020:intron 40.0%
CTTAAGCTCCCAAAATGTGT+TGG - chr4_1:52763360-52763379 None:intergenic 40.0%
GGAATCATTGCCTAAATGGT+GGG - chr4_1:52763486-52763505 None:intergenic 40.0%
TGAGGGAATCATTGCCTAAA+TGG - chr4_1:52763490-52763509 None:intergenic 40.0%
GCAATGATTCCCTCATTAAG+TGG + chr4_1:52763495-52763514 Msa0555020:intron 40.0%
GTGGGTATTACCACTTAATG+AGG - chr4_1:52763508-52763527 None:intergenic 40.0%
CTCAATAAGAGAGTGAGTGT+TGG + chr4_1:52763538-52763557 Msa0555020:intron 40.0%
!!! TTTTAGAGTGAGTGTTGCCA+AGG + chr4_1:52763569-52763588 Msa0555020:intron 40.0%
GGCATGTTGCACAAGAATTT+AGG - chr4_1:52763684-52763703 None:intergenic 40.0%
ACCAAAAAAACCTGTTCGGA+CGG - chr4_1:52763808-52763827 None:intergenic 40.0%
! TTTCAGAAAGGCTTGTTCTG+GGG + chr4_1:52763831-52763850 Msa0555020:intron 40.0%
TTGCATAACCAATTCCCTTG+GGG - chr4_1:52764109-52764128 None:intergenic 40.0%
GTTGCATAACCAATTCCCTT+GGG - chr4_1:52764110-52764129 None:intergenic 40.0%
!! ATGGAGAGACGCTTTTTGAT+TGG - chr4_1:52764696-52764715 None:intergenic 40.0%
ATAGCGTATTTCGAGGATTC+AGG + chr4_1:52764763-52764782 Msa0555020:intron 40.0%
CAGATCAGATGATGAGGTTA+TGG - chr4_1:52764790-52764809 None:intergenic 40.0%
! TGATCTGGTTTGTAATGGGA+GGG + chr4_1:52764854-52764873 Msa0555020:intron 40.0%
CTTTGTGAGCAAATGAAGTG+AGG - chr4_1:52765070-52765089 None:intergenic 40.0%
AATTAGGTCGAAAGCTTCCA+GGG + chr4_1:52765121-52765140 Msa0555020:intron 40.0%
! CCTTCTCAATTGCCTTTTTC+TGG - chr4_1:52765160-52765179 None:intergenic 40.0%
CCAGAAAAAGGCAATTGAGA+AGG + chr4_1:52765157-52765176 Msa0555020:CDS 40.0%
AACACCAAACAGATTACCTG+AGG - chr4_1:52765248-52765267 None:intergenic 40.0%
GCGCACATTAAAAAGGAAAG+GGG - chr4_1:52765450-52765469 None:intergenic 40.0%
GGCGCACATTAAAAAGGAAA+GGG - chr4_1:52765451-52765470 None:intergenic 40.0%
TGGCGCACATTAAAAAGGAA+AGG - chr4_1:52765452-52765471 None:intergenic 40.0%
TAAGGTGGCGCACATTAAAA+AGG - chr4_1:52765457-52765476 None:intergenic 40.0%
ATGCATTAGCATCCTTGCAA+AGG + chr4_1:52765498-52765517 Msa0555020:CDS 40.0%
CTCATTCTTCTCAGTAGACA+GGG - chr4_1:52765576-52765595 None:intergenic 40.0%
TCTCATTCTTCTCAGTAGAC+AGG - chr4_1:52765577-52765596 None:intergenic 40.0%
AACACCACAGATCCTAAACA+AGG + chr4_1:52765836-52765855 Msa0555020:CDS 40.0%
GTCGTATCGAGGTAAATTTG+TGG + chr4_1:52765929-52765948 Msa0555020:intron 40.0%
!! CCAGGTTCTACTTTTACTTC+AGG - chr4_1:52766011-52766030 None:intergenic 40.0%
CCTGAAGTAAAAGTAGAACC+TGG + chr4_1:52766008-52766027 Msa0555020:intron 40.0%
! GGTTTTCCAGTCTATCGAAA+AGG - chr4_1:52766065-52766084 None:intergenic 40.0%
TAAACTGATGCGCAGAAATG+AGG - chr4_1:52766155-52766174 None:intergenic 40.0%
ATGTAGCCATCATCAAGATG+CGG + chr4_1:52766179-52766198 Msa0555020:CDS 40.0%
CCGACACAAAGATTAACCAA+TGG - chr4_1:52766246-52766265 None:intergenic 40.0%
AAGCATCAGTGTGTTGTACA+AGG + chr4_1:52766399-52766418 Msa0555020:CDS 40.0%
TTCCCCACTTATTCACCATA+TGG + chr4_1:52766615-52766634 Msa0555020:intron 40.0%
TCCCCACTTATTCACCATAT+GGG + chr4_1:52766616-52766635 Msa0555020:intron 40.0%
ACCCCATATGGTGAATAAGT+GGG - chr4_1:52766621-52766640 None:intergenic 40.0%
TGTTTGGTCAAGTAACCTAG+TGG - chr4_1:52766654-52766673 None:intergenic 40.0%
CATCGTCAGAATGATCATCT+TGG - chr4_1:52766835-52766854 None:intergenic 40.0%
CTCTAGCCAAACTCTCTATT+CGG + chr4_1:52766884-52766903 Msa0555020:intron 40.0%
TCTAGCCAAACTCTCTATTC+GGG + chr4_1:52766885-52766904 Msa0555020:intron 40.0%
ATTAGTGGTGCACTGGAAAA+AGG - chr4_1:52766932-52766951 None:intergenic 40.0%
CCAACTCTTAAAACTGCTTC+TGG - chr4_1:52767068-52767087 None:intergenic 40.0%
!!! CCAGAAGCAGTTTTAAGAGT+TGG + chr4_1:52767065-52767084 Msa0555020:intron 40.0%
CTTGCCATGAAATTTCTCTC+AGG + chr4_1:52767140-52767159 Msa0555020:intron 40.0%
TCTGCCTGAGAGAAATTTCA+TGG - chr4_1:52767147-52767166 None:intergenic 40.0%
ATGGTTGGGAAGACAACTTA+GGG - chr4_1:52767234-52767253 None:intergenic 40.0%
AATGGTTGGGAAGACAACTT+AGG - chr4_1:52767235-52767254 None:intergenic 40.0%
GTGAAAGGCGAATCTTTATC+AGG - chr4_1:52767493-52767512 None:intergenic 40.0%
TACATTTCCCTCTTGGAATC+CGG - chr4_1:52767526-52767545 None:intergenic 40.0%
! TATCGGTGTCTCAGATTTGA+TGG + chr4_1:52767665-52767684 Msa0555020:intron 40.0%
GTGTTACAAGACCAACATGA+TGG - chr4_1:52767924-52767943 None:intergenic 40.0%
!! TCATGTTGGTCTTGTAACAC+TGG + chr4_1:52767924-52767943 Msa0555020:CDS 40.0%
TGGTTTCTGTATATGGTTGG+TGG + chr4_1:52768298-52768317 Msa0555020:three_prime_UTR 40.0%
GTCTTTGAATCATTGCTGCT+GGG - chr4_1:52768354-52768373 None:intergenic 40.0%
TGTCTTTGAATCATTGCTGC+TGG - chr4_1:52768355-52768374 None:intergenic 40.0%
! CAAAGACATGCTGAAGTGTT+TGG + chr4_1:52768367-52768386 Msa0555020:three_prime_UTR 40.0%
GGAAGTGATTAACCAGAAGG+AGG + chr4_1:52753934-52753953 Msa0555020:CDS 45.0%
GATGATCTTCATCCTCCTTC+TGG - chr4_1:52753949-52753968 None:intergenic 45.0%
AGGAGGATGAAGATCATCCA+AGG + chr4_1:52753951-52753970 Msa0555020:CDS 45.0%
GGAGGATGAAGATCATCCAA+GGG + chr4_1:52753952-52753971 Msa0555020:CDS 45.0%
GTCGGAGAATGAAGAAGAAG+AGG + chr4_1:52754057-52754076 Msa0555020:CDS 45.0%
GGAAGGAGAAAACGATACAG+TGG + chr4_1:52754078-52754097 Msa0555020:CDS 45.0%
AGGAGAAAACGATACAGTGG+AGG + chr4_1:52754081-52754100 Msa0555020:CDS 45.0%
CAGTGGAGGAAGATCAATTC+AGG + chr4_1:52754095-52754114 Msa0555020:CDS 45.0%
! GATCAATTCAGGTTCGGCAA+CGG + chr4_1:52754106-52754125 Msa0555020:CDS 45.0%
CTGTTACGTACGAAGTCCAA+CGG - chr4_1:52754139-52754158 None:intergenic 45.0%
GGTGGTAGTCTTCCAATTTC+TGG - chr4_1:52754183-52754202 None:intergenic 45.0%
AGACTACCACCAGAAATCGA+TGG + chr4_1:52754192-52754211 Msa0555020:CDS 45.0%
!! TGGTATGAGTGTTGAACGGA+AGG + chr4_1:52754331-52754350 Msa0555020:intron 45.0%
!! GGTATGAGTGTTGAACGGAA+GGG + chr4_1:52754332-52754351 Msa0555020:intron 45.0%
!! GTTTTGCTACTTGCATGCCA+TGG + chr4_1:52754363-52754382 Msa0555020:intron 45.0%
CTTGCATGCCATGGACTTAA+TGG + chr4_1:52754372-52754391 Msa0555020:intron 45.0%
!! TGCCATGGACTTAATGGACT+TGG + chr4_1:52754378-52754397 Msa0555020:intron 45.0%
ATTCCTCCTCTACATCAGCT+AGG - chr4_1:52754662-52754681 None:intergenic 45.0%
ACAGGGCAAGAGGTCAAAAA+AGG + chr4_1:52754695-52754714 Msa0555020:CDS 45.0%
TTACATGCCAGGTGACTTTG+CGG + chr4_1:52754959-52754978 Msa0555020:intron 45.0%
AAAAATGCCGCAAAGTCACC+TGG - chr4_1:52754969-52754988 None:intergenic 45.0%
ACGTTTACCTTTCTGACGAG+AGG + chr4_1:52755441-52755460 Msa0555020:intron 45.0%
GAAACTTCCTCTCGTCAGAA+AGG - chr4_1:52755451-52755470 None:intergenic 45.0%
!! TGGTCTAGTAATGGATGTCC+CGG - chr4_1:52755680-52755699 None:intergenic 45.0%
GACTTGAGGTGGTCTAGTAA+TGG - chr4_1:52755689-52755708 None:intergenic 45.0%
! ATTTGGAGTGTGACTTGAGG+TGG - chr4_1:52755700-52755719 None:intergenic 45.0%
! GACATTTGGAGTGTGACTTG+AGG - chr4_1:52755703-52755722 None:intergenic 45.0%
TACGCCGAAGACAAGACATT+TGG - chr4_1:52755717-52755736 None:intergenic 45.0%
ACAGCTCCAAGGATGTGATA+CGG - chr4_1:52756125-52756144 None:intergenic 45.0%
TTTGGGAAAGGCTCTTTGTG+TGG + chr4_1:52756225-52756244 Msa0555020:CDS 45.0%
TCAGTGTTGTCAACGGAGAA+AGG + chr4_1:52756561-52756580 Msa0555020:intron 45.0%
! CGCCATAGGTAGTTTGTGAT+GGG - chr4_1:52756645-52756664 None:intergenic 45.0%
CCATCACAAACTACCTATGG+CGG + chr4_1:52756643-52756662 Msa0555020:intron 45.0%
AGATCTTTAACGACCGCCAT+AGG - chr4_1:52756659-52756678 None:intergenic 45.0%
TGTTGGTCATGGAACCATCA+TGG - chr4_1:52756683-52756702 None:intergenic 45.0%
CAACCTGCCAAATATGAGAG+GGG - chr4_1:52756810-52756829 None:intergenic 45.0%
CCAACCTGCCAAATATGAGA+GGG - chr4_1:52756811-52756830 None:intergenic 45.0%
TCCAACCTGCCAAATATGAG+AGG - chr4_1:52756812-52756831 None:intergenic 45.0%
! GGCAGGTTGGATCAATGATA+AGG + chr4_1:52756821-52756840 Msa0555020:intron 45.0%
TGTGCGTGGGATAATTGTAG+GGG - chr4_1:52756997-52757016 None:intergenic 45.0%
GTTGGCCAAAGTCAGAATGT+GGG - chr4_1:52757199-52757218 None:intergenic 45.0%
TGTTGGCCAAAGTCAGAATG+TGG - chr4_1:52757200-52757219 None:intergenic 45.0%
AATAATGCCAACTCAACCCC+TGG - chr4_1:52758018-52758037 None:intergenic 45.0%
! GTTGGCATTATTGTAGTGGG+TGG + chr4_1:52758026-52758045 Msa0555020:intron 45.0%
!! TATTGTAGTGGGTGGCCATT+TGG + chr4_1:52758034-52758053 Msa0555020:intron 45.0%
!! ATTGTAGTGGGTGGCCATTT+GGG + chr4_1:52758035-52758054 Msa0555020:intron 45.0%
!!! CTTTTTTGCTTAAGTCGGGG+AGG + chr4_1:52758309-52758328 Msa0555020:intron 45.0%
! GCTCAACTTGACCACACTTT+TGG - chr4_1:52758546-52758565 None:intergenic 45.0%
GGAATCTGCCATGTTCATCT+TGG + chr4_1:52758745-52758764 Msa0555020:CDS 45.0%
TGGAAACATGGAAATCGCTC+AGG + chr4_1:52758765-52758784 Msa0555020:CDS 45.0%
!! TTGACAAGCTTTGGAAAGGG+GGG - chr4_1:52759388-52759407 None:intergenic 45.0%
GCATGCAATACACCAATTGG+TGG - chr4_1:52759819-52759838 None:intergenic 45.0%
GCTGCATGCAATACACCAAT+TGG - chr4_1:52759822-52759841 None:intergenic 45.0%
ATTAGGCTAGAGAGGAGTAG+TGG - chr4_1:52760043-52760062 None:intergenic 45.0%
TTAATCCTGGCAGATCTCTC+TGG - chr4_1:52760176-52760195 None:intergenic 45.0%
TGCCAGGATTAATAGGTTGC+AGG + chr4_1:52760184-52760203 Msa0555020:intron 45.0%
AGCCTGCAACCTATTAATCC+TGG - chr4_1:52760189-52760208 None:intergenic 45.0%
! CATTGTCGACAGTCTTTTGG+AGG + chr4_1:52760611-52760630 Msa0555020:intron 45.0%
! AGGGATAAAGGGTACGTTAG+AGG + chr4_1:52760631-52760650 Msa0555020:intron 45.0%
TTTGTTGGGCCACCAGTTAT+TGG + chr4_1:52760791-52760810 Msa0555020:intron 45.0%
! CTAATGGGTGGTCCAATAAC+TGG - chr4_1:52760806-52760825 None:intergenic 45.0%
CAGTTATTGGACCACCCATT+AGG + chr4_1:52760804-52760823 Msa0555020:intron 45.0%
GTTATTGGACCACCCATTAG+GGG + chr4_1:52760806-52760825 Msa0555020:intron 45.0%
GCGCCAAATGAAAATGTTGG+TGG - chr4_1:52761250-52761269 None:intergenic 45.0%
!!! CAAGCTTTTGAGGTAGAGCT+AGG - chr4_1:52761318-52761337 None:intergenic 45.0%
! ACCTCAAAAGCTTGCTCTAG+AGG + chr4_1:52761324-52761343 Msa0555020:intron 45.0%
TGGCTAATAGTAGGCATGAG+GGG - chr4_1:52761443-52761462 None:intergenic 45.0%
CGCTCCATATGGCTAATAGT+AGG - chr4_1:52761452-52761471 None:intergenic 45.0%
! CGTATTTTCTGCGCTCCATA+TGG - chr4_1:52761463-52761482 None:intergenic 45.0%
CTGTTTGTAACCACAACGAC+TGG - chr4_1:52761620-52761639 None:intergenic 45.0%
AACTCCCCCAAGAAAAAGGT+TGG - chr4_1:52761670-52761689 None:intergenic 45.0%
! GGGGAGTTTTCTCGAGAATT+CGG + chr4_1:52761682-52761701 Msa0555020:intron 45.0%
! GTTGCACACTCTTTTGACAC+AGG + chr4_1:52761824-52761843 Msa0555020:intron 45.0%
TGTTGAAGCACGCATAGCTT+TGG + chr4_1:52762004-52762023 Msa0555020:CDS 45.0%
! TTTGGCTTCCCTTCTAGTTG+AGG + chr4_1:52762022-52762041 Msa0555020:CDS 45.0%
TTTCCCCTCCTCAACTAGAA+GGG - chr4_1:52762033-52762052 None:intergenic 45.0%
TGGAGGAGACAACAAGGAAA+TGG - chr4_1:52762066-52762085 None:intergenic 45.0%
! TTCCTTGTTGTCTCCTCCAA+AGG + chr4_1:52762067-52762086 Msa0555020:CDS 45.0%
! ATCCTTTGGAGGAGACAACA+AGG - chr4_1:52762072-52762091 None:intergenic 45.0%
TTGTCTCCTCCAAAGGATTC+TGG + chr4_1:52762074-52762093 Msa0555020:CDS 45.0%
CAAGTACCAGAATCCTTTGG+AGG - chr4_1:52762083-52762102 None:intergenic 45.0%
ATTACCTTTCGTCTAGGAGC+TGG - chr4_1:52762326-52762345 None:intergenic 45.0%
AACTGAGCATGCATGTACAC+AGG - chr4_1:52762450-52762469 None:intergenic 45.0%
CTCGGTTAAAAAGGTTCAGC+TGG + chr4_1:52762529-52762548 Msa0555020:intron 45.0%
! ATCTTAGCTCGTGGTCTTGA+GGG + chr4_1:52762857-52762876 Msa0555020:intron 45.0%
TTCAAGAAGCTTTACCTGCC+CGG + chr4_1:52763172-52763191 Msa0555020:intron 45.0%
AGCTCTTTGAGCTTGAAGCA+AGG + chr4_1:52763242-52763261 Msa0555020:intron 45.0%
GCTTCCCTAAAACCTTTCTC+TGG + chr4_1:52763275-52763294 Msa0555020:intron 45.0%
! TGTGCAGGACCAACACATTT+TGG + chr4_1:52763348-52763367 Msa0555020:intron 45.0%
! GTGCAGGACCAACACATTTT+GGG + chr4_1:52763349-52763368 Msa0555020:intron 45.0%
TCCGACACTCACTCTCTTAT+TGG + chr4_1:52763443-52763462 Msa0555020:intron 45.0%
CCCAATAAGAGAGTGAGTGT+CGG - chr4_1:52763447-52763466 None:intergenic 45.0%
CCGACACTCACTCTCTTATT+GGG + chr4_1:52763444-52763463 Msa0555020:intron 45.0%
GGGAATCATTGCCTAAATGG+TGG - chr4_1:52763487-52763506 None:intergenic 45.0%
!!! GATCGCGATTTTGACTACCT+TGG - chr4_1:52763589-52763608 None:intergenic 45.0%
AGGTAGTCAAAATCGCGATC+TGG + chr4_1:52763589-52763608 Msa0555020:intron 45.0%
GGTAGTCAAAATCGCGATCT+GGG + chr4_1:52763590-52763609 Msa0555020:intron 45.0%
ATCGTACGCTTCCATGATCT+TGG + chr4_1:52763620-52763639 Msa0555020:intron 45.0%
GAGTAAGACCTCCAAGATCA+TGG - chr4_1:52763634-52763653 None:intergenic 45.0%
!!! ACCGTCCGAACAGGTTTTTT+TGG + chr4_1:52763804-52763823 Msa0555020:intron 45.0%
TTGCTTCCCACTCACTTGTT+TGG - chr4_1:52763858-52763877 None:intergenic 45.0%
!! AATGCTAAAGAGTGCCCCAA+GGG + chr4_1:52764092-52764111 Msa0555020:intron 45.0%
GGTTGCATAACCAATTCCCT+TGG - chr4_1:52764111-52764130 None:intergenic 45.0%
! CGATCTTGACTTCTGGTCTT+TGG + chr4_1:52764417-52764436 Msa0555020:intron 45.0%
! CTTGACTTCTGGTCTTTGGT+CGG + chr4_1:52764421-52764440 Msa0555020:intron 45.0%
CACTCACAGATCAGATGATG+AGG - chr4_1:52764796-52764815 None:intergenic 45.0%
! CTGATCTGGTTTGTAATGGG+AGG + chr4_1:52764853-52764872 Msa0555020:intron 45.0%
! GATCTGGTTTGTAATGGGAG+GGG + chr4_1:52764855-52764874 Msa0555020:intron 45.0%
CAATTAGGTCGAAAGCTTCC+AGG + chr4_1:52765120-52765139 Msa0555020:intron 45.0%
ACTTAGCCAGTCAATTCCAG+AGG - chr4_1:52765207-52765226 None:intergenic 45.0%
TGAGCCTCAGGTAATCTGTT+TGG + chr4_1:52765241-52765260 Msa0555020:intron 45.0%
ATATTGGGTGGGATGTTTCC+AGG + chr4_1:52765328-52765347 Msa0555020:intron 45.0%
GAGAATCTGTGTTAGGTTCC+TGG - chr4_1:52765349-52765368 None:intergenic 45.0%
CACAAGGGAGAATCTGTGTT+AGG - chr4_1:52765356-52765375 None:intergenic 45.0%
TGCTTCGCTATACCTTTGCA+AGG - chr4_1:52765513-52765532 None:intergenic 45.0%
! GCAAAGGTATAGCGAAGCAT+TGG + chr4_1:52765514-52765533 Msa0555020:CDS 45.0%
ATGCACATAGTGTTGCAGCT+TGG + chr4_1:52765891-52765910 Msa0555020:CDS 45.0%
GTGGATGCAAGACGTTAGTT+TGG + chr4_1:52765948-52765967 Msa0555020:intron 45.0%
GACTGGAAAACCGAGATACA+AGG + chr4_1:52766073-52766092 Msa0555020:intron 45.0%
TGATGCGCAGAAATGAGGAT+AGG - chr4_1:52766150-52766169 None:intergenic 45.0%
ACTTCTGCCTGAGAATCCAT+TGG + chr4_1:52766227-52766246 Msa0555020:CDS 45.0%
ATGTTTCTTAGGTACGGCCT+TGG + chr4_1:52766344-52766363 Msa0555020:intron 45.0%
TGGTGAATAAGTGGGGAATC+CGG - chr4_1:52766613-52766632 None:intergenic 45.0%
CCCCATATGGTGAATAAGTG+GGG - chr4_1:52766620-52766639 None:intergenic 45.0%
CCCCACTTATTCACCATATG+GGG + chr4_1:52766617-52766636 Msa0555020:intron 45.0%
CACCCCATATGGTGAATAAG+TGG - chr4_1:52766622-52766641 None:intergenic 45.0%
GGCTAGAAATTCACCCCATA+TGG - chr4_1:52766633-52766652 None:intergenic 45.0%
ACCAAGATGAGCAGTGCATT+GGG - chr4_1:52766755-52766774 None:intergenic 45.0%
! TGCATTTGGGATGAAGGATG+AGG - chr4_1:52766795-52766814 None:intergenic 45.0%
! AGCTAGTGCATTTGGGATGA+AGG - chr4_1:52766801-52766820 None:intergenic 45.0%
TGGCTCAAGCTAGTGCATTT+GGG - chr4_1:52766808-52766827 None:intergenic 45.0%
ATGGCTCAAGCTAGTGCATT+TGG - chr4_1:52766809-52766828 None:intergenic 45.0%
AGCATCCCGAATAGAGAGTT+TGG - chr4_1:52766893-52766912 None:intergenic 45.0%
ACTCTCTATTCGGGATGCTT+TGG + chr4_1:52766894-52766913 Msa0555020:intron 45.0%
! TTTGGGATGAAGGATGAAGC+CGG - chr4_1:52766971-52766990 None:intergenic 45.0%
! AGCTAGTGTGTTTGGGATGA+AGG - chr4_1:52766981-52767000 None:intergenic 45.0%
AAGGCTGAGCTAGTGTGTTT+GGG - chr4_1:52766988-52767007 None:intergenic 45.0%
AAAGGCTGAGCTAGTGTGTT+TGG - chr4_1:52766989-52767008 None:intergenic 45.0%
GGCAGATCATGCTATCAATC+TGG + chr4_1:52767161-52767180 Msa0555020:intron 45.0%
AGATTCGCCTTTCACCCAAA+AGG + chr4_1:52767498-52767517 Msa0555020:intron 45.0%
! CTTGGAATCCGGATCCTTTT+GGG - chr4_1:52767515-52767534 None:intergenic 45.0%
! TCTTGGAATCCGGATCCTTT+TGG - chr4_1:52767516-52767535 None:intergenic 45.0%
AAAAGGATCCGGATTCCAAG+AGG + chr4_1:52767515-52767534 Msa0555020:intron 45.0%
AAAGGATCCGGATTCCAAGA+GGG + chr4_1:52767516-52767535 Msa0555020:intron 45.0%
GAGACACCGATAACAGTGAT+TGG - chr4_1:52767657-52767676 None:intergenic 45.0%
!! TTATTAATTACAATTATAAT+TGG + chr4_1:52757325-52757344 Msa0555020:intron 5.0%
!!! TAAACATATTTTAATATTTA+TGG + chr4_1:52764357-52764376 Msa0555020:intron 5.0%
TCGTTGTCTTCTATCGCCCT+TGG - chr4_1:52753971-52753990 None:intergenic 50.0%
ACCGAAGACGACGCATTGTA+CGG + chr4_1:52754004-52754023 Msa0555020:CDS 50.0%
ACCGTACAATGCGTCGTCTT+CGG - chr4_1:52754008-52754027 None:intergenic 50.0%
TTGTACGGTGCGGAAGAGAA+CGG + chr4_1:52754019-52754038 Msa0555020:CDS 50.0%
!! GGTACTCCATCGATTTCTGG+TGG - chr4_1:52754201-52754220 None:intergenic 50.0%
!! CTCGGTACTCCATCGATTTC+TGG - chr4_1:52754204-52754223 None:intergenic 50.0%
GCTTTCTGTTGTCGAGAGCT+CGG - chr4_1:52754222-52754241 None:intergenic 50.0%
AGTTACCGGTGAGGTTGTTG+CGG - chr4_1:52754253-52754272 None:intergenic 50.0%
! TGAATTTGGGACAGGGCAAG+AGG + chr4_1:52754685-52754704 Msa0555020:CDS 50.0%
GCGACTCGTATAGTGCATGA+GGG - chr4_1:52755277-52755296 None:intergenic 50.0%
TACGAGTCGCCGTTATGACA+CGG + chr4_1:52755287-52755306 Msa0555020:CDS 50.0%
TAGTGCCCATCCAAATCCAC+CGG + chr4_1:52755658-52755677 Msa0555020:intron 50.0%
! ATGTCCCGGTGGATTTGGAT+GGG - chr4_1:52755666-52755685 None:intergenic 50.0%
! AATGGATGTCCCGGTGGATT+TGG - chr4_1:52755671-52755690 None:intergenic 50.0%
!! TCTAGTAATGGATGTCCCGG+TGG - chr4_1:52755677-52755696 None:intergenic 50.0%
AAGCGTGTTGAGAGTCTCAC+AGG + chr4_1:52755741-52755760 Msa0555020:intron 50.0%
CAGGCACTTCAGATGTGATC+TGG + chr4_1:52755760-52755779 Msa0555020:intron 50.0%
GTTGCATGAAGTTGTCAGGC+TGG + chr4_1:52756082-52756101 Msa0555020:CDS 50.0%
CAGCTCCAAGGATGTGATAC+GGG - chr4_1:52756124-52756143 None:intergenic 50.0%
GAGCTGTCCATGGTGCAATT+GGG + chr4_1:52756138-52756157 Msa0555020:CDS 50.0%
AGCTGTCCATGGTGCAATTG+GGG + chr4_1:52756139-52756158 Msa0555020:CDS 50.0%
CATGATCCCCAATTGCACCA+TGG - chr4_1:52756148-52756167 None:intergenic 50.0%
!! TAACACGCCATTTTGGCCTG+CGG + chr4_1:52756601-52756620 Msa0555020:intron 50.0%
! CCGCCATAGGTAGTTTGTGA+TGG - chr4_1:52756646-52756665 None:intergenic 50.0%
AGGTAGCGAACTCCACTTTG+CGG + chr4_1:52756730-52756749 Msa0555020:intron 50.0%
CAACCCCTCTCATATTTGGC+AGG + chr4_1:52756804-52756823 Msa0555020:intron 50.0%
CCCTCTCATATTTGGCAGGT+TGG + chr4_1:52756808-52756827 Msa0555020:intron 50.0%
GTGCGTGGGATAATTGTAGG+GGG - chr4_1:52756996-52757015 None:intergenic 50.0%
CCAACTCAACCCCTGGTAAT+AGG - chr4_1:52758011-52758030 None:intergenic 50.0%
CCTATTACCAGGGGTTGAGT+TGG + chr4_1:52758008-52758027 Msa0555020:intron 50.0%
ACGTGCTTGCTTGCATTCTC+TGG - chr4_1:52759564-52759583 None:intergenic 50.0%
CATCAATGAGTCTGCGACCT+CGG - chr4_1:52759598-52759617 None:intergenic 50.0%
GAGGTCGCAGACTCATTGAT+GGG + chr4_1:52759597-52759616 Msa0555020:CDS 50.0%
! GCAGACTCATTGATGGGTCT+TGG + chr4_1:52759603-52759622 Msa0555020:CDS 50.0%
ACTAAAGCTCCTGCATACGC+AGG + chr4_1:52759778-52759797 Msa0555020:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG + chr4_1:52759779-52759798 Msa0555020:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr4_1:52759888-52759907 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr4_1:52759889-52759908 None:intergenic 50.0%
GTGGTTGTCACGTGACTGAA+AGG - chr4_1:52759895-52759914 None:intergenic 50.0%
!! GCTAGAGAGGAGTAGTGGAT+TGG - chr4_1:52760038-52760057 None:intergenic 50.0%
TGATGCCATCACCATGTAGC+TGG + chr4_1:52760141-52760160 Msa0555020:intron 50.0%
TCTCTCCAGCTACATGGTGA+TGG - chr4_1:52760149-52760168 None:intergenic 50.0%
ATGGGTGGTCCAATAACTGG+TGG - chr4_1:52760803-52760822 None:intergenic 50.0%
ACACCCTCAACACCCCTAAT+GGG - chr4_1:52760821-52760840 None:intergenic 50.0%
AACACCCTCAACACCCCTAA+TGG - chr4_1:52760822-52760841 None:intergenic 50.0%
!!! GCCTCTAGAGCAAGCTTTTG+AGG - chr4_1:52761328-52761347 None:intergenic 50.0%
!! AAAAGCTTGCTCTAGAGGCG+AGG + chr4_1:52761329-52761348 Msa0555020:intron 50.0%
!! GCATGAGGGGGTGTTGTTAT+TGG - chr4_1:52761430-52761449 None:intergenic 50.0%
GGCTAATAGTAGGCATGAGG+GGG - chr4_1:52761442-52761461 None:intergenic 50.0%
TTAAGAGGCGAGGATTGCTC+AGG + chr4_1:52761566-52761585 Msa0555020:intron 50.0%
! GGCTTTATCTCCAGTCGTTG+TGG + chr4_1:52761607-52761626 Msa0555020:intron 50.0%
! AGAGTCAAAAGGGGGTGCAT+CGG + chr4_1:52761800-52761819 Msa0555020:intron 50.0%
! GCTTCCCTTCTAGTTGAGGA+GGG + chr4_1:52762026-52762045 Msa0555020:CDS 50.0%
! CTTCCCTTCTAGTTGAGGAG+GGG + chr4_1:52762027-52762046 Msa0555020:CDS 50.0%
CTTTCCCCTCCTCAACTAGA+AGG - chr4_1:52762034-52762053 None:intergenic 50.0%
TGTTCCAGCTCCTAGACGAA+AGG + chr4_1:52762319-52762338 Msa0555020:CDS 50.0%
TCTTCCCTGCTTGTGGGAAA+AGG + chr4_1:52762613-52762632 Msa0555020:intron 50.0%
! AACGCCTTTTCCCACAAGCA+GGG - chr4_1:52762620-52762639 None:intergenic 50.0%
! AAACGCCTTTTCCCACAAGC+AGG - chr4_1:52762621-52762640 None:intergenic 50.0%
CTCAAGACCACGAGCTAAGA+TGG - chr4_1:52762858-52762877 None:intergenic 50.0%
! CATCTTAGCTCGTGGTCTTG+AGG + chr4_1:52762856-52762875 Msa0555020:intron 50.0%
!! AACACTCTAAGGCTAGCACC+GGG - chr4_1:52763193-52763212 None:intergenic 50.0%
!! GAACACTCTAAGGCTAGCAC+CGG - chr4_1:52763194-52763213 None:intergenic 50.0%
!! GAGCTTAAGCTTTTGGCTGC+AGG + chr4_1:52763371-52763390 Msa0555020:intron 50.0%
TCACAAGGGTCCCACCATTT+AGG + chr4_1:52763473-52763492 Msa0555020:intron 50.0%
GTACGCTTCCATGATCTTGG+AGG + chr4_1:52763623-52763642 Msa0555020:intron 50.0%
ACAGGCAGATGAAGGAGAGA+GGG - chr4_1:52763746-52763765 None:intergenic 50.0%
AGGAAGACACAGGCAGATGA+AGG - chr4_1:52763754-52763773 None:intergenic 50.0%
CAGAAGCTAGAGGAAGACAC+AGG - chr4_1:52763764-52763783 None:intergenic 50.0%
TTCGGACGGTAAGAAGCAGA+GGG - chr4_1:52763794-52763813 None:intergenic 50.0%
TGGGGACCAAACAAGTGAGT+GGG + chr4_1:52763849-52763868 Msa0555020:intron 50.0%
CGAGGGAAAGGCAACGTAAT+TGG + chr4_1:52763964-52763983 Msa0555020:intron 50.0%
!! GAATGCTAAAGAGTGCCCCA+AGG + chr4_1:52764091-52764110 Msa0555020:intron 50.0%
!! AAAGAGTGCCCCAAGGGAAT+TGG + chr4_1:52764098-52764117 Msa0555020:intron 50.0%
! TCCTTACTGGTTGTTGCTGC+AGG + chr4_1:52764669-52764688 Msa0555020:intron 50.0%
! CCTTACTGGTTGTTGCTGCA+GGG + chr4_1:52764670-52764689 Msa0555020:intron 50.0%
!!! CTGGAGCAACTTTTTTGCCC+TGG - chr4_1:52765141-52765160 None:intergenic 50.0%
GAAGGAGAGAAAGAAAGCCG+AGG + chr4_1:52765175-52765194 Msa0555020:CDS 50.0%
TGACTCAGATGATGAGCCTC+AGG + chr4_1:52765229-52765248 Msa0555020:CDS 50.0%
GCTACTACAAGGTCGTATCG+AGG + chr4_1:52765918-52765937 Msa0555020:CDS 50.0%
TGCGCAGAAATGAGGATAGG+AGG - chr4_1:52766147-52766166 None:intergenic 50.0%
TCCTTGCCGCATCTTGATGA+TGG - chr4_1:52766188-52766207 None:intergenic 50.0%
GGAGATCTGCAAGAACAGTC+AGG + chr4_1:52766446-52766465 Msa0555020:CDS 50.0%
TGCCAACTGAGCTATGCTCA+CGG - chr4_1:52766554-52766573 None:intergenic 50.0%
TGAGCATAGCTCAGTTGGCA+GGG + chr4_1:52766554-52766573 Msa0555020:intron 50.0%
CAGGGACATTGCAGCATACA+GGG + chr4_1:52766572-52766591 Msa0555020:intron 50.0%
AGGGACATTGCAGCATACAG+GGG + chr4_1:52766573-52766592 Msa0555020:intron 50.0%
ACATTGCAGCATACAGGGGT+CGG + chr4_1:52766577-52766596 Msa0555020:intron 50.0%
GTGAATAAGTGGGGAATCCG+GGG - chr4_1:52766611-52766630 None:intergenic 50.0%
GGTGAATAAGTGGGGAATCC+GGG - chr4_1:52766612-52766631 None:intergenic 50.0%
!! GGGGTGAATTTCTAGCCACT+AGG + chr4_1:52766636-52766655 Msa0555020:intron 50.0%
TCCCAATGCACTGCTCATCT+TGG + chr4_1:52766751-52766770 Msa0555020:intron 50.0%
GACCAAGATGAGCAGTGCAT+TGG - chr4_1:52766756-52766775 None:intergenic 50.0%
TATTCGGGATGCTTTGGCCT+CGG + chr4_1:52766900-52766919 Msa0555020:intron 50.0%
TTCCAGTGCACCACTAATCC+TGG + chr4_1:52766934-52766953 Msa0555020:intron 50.0%
! GCATCTAGGACCAGGATTAG+TGG - chr4_1:52766947-52766966 None:intergenic 50.0%
AATCCTGGTCCTAGATGCAC+CGG + chr4_1:52766949-52766968 Msa0555020:intron 50.0%
! AGGATGATGCCAGAGCATCT+GGG - chr4_1:52767014-52767033 None:intergenic 50.0%
! AAGGATGATGCCAGAGCATC+TGG - chr4_1:52767015-52767034 None:intergenic 50.0%
! AGTCAGTGCATCTGGAACGA+AGG - chr4_1:52767034-52767053 None:intergenic 50.0%
!! TCGTTCCAGATGCACTGACT+TGG + chr4_1:52767034-52767053 Msa0555020:intron 50.0%
AAAGGCCAAGTCAGTGCATC+TGG - chr4_1:52767042-52767061 None:intergenic 50.0%
TTAGGGAGGCTGAAGAAGTC+GGG - chr4_1:52767217-52767236 None:intergenic 50.0%
CTTAGGGAGGCTGAAGAAGT+CGG - chr4_1:52767218-52767237 None:intergenic 50.0%
GTTGGGAAGACAACTTAGGG+AGG - chr4_1:52767231-52767250 None:intergenic 50.0%
GCCTTTCACCCAAAAGGATC+CGG + chr4_1:52767504-52767523 Msa0555020:intron 50.0%
!! TCCGGATCCTTTTGGGTGAA+AGG - chr4_1:52767508-52767527 None:intergenic 50.0%
TTACTGCAACCTTCGCAGAG+AGG + chr4_1:52768050-52768069 Msa0555020:CDS 50.0%
AGACGACGCATTGTACGGTG+CGG + chr4_1:52754009-52754028 Msa0555020:CDS 55.0%
CGGAGAAGAAGAAGACGCGT+CGG + chr4_1:52754039-52754058 Msa0555020:CDS 55.0%
CGGCAACGGTGTAAATCCGT+TGG + chr4_1:52754120-52754139 Msa0555020:CDS 55.0%
AACCACCGCAACAACCTCAC+CGG + chr4_1:52754245-52754264 Msa0555020:CDS 55.0%
GGTAGGCCTAGCTGATGTAG+AGG + chr4_1:52754653-52754672 Msa0555020:CDS 55.0%
AGGCCTAGCTGATGTAGAGG+AGG + chr4_1:52754656-52754675 Msa0555020:CDS 55.0%
GGCGACTCGTATAGTGCATG+AGG - chr4_1:52755278-52755297 None:intergenic 55.0%
AGTGCCCATCCAAATCCACC+GGG + chr4_1:52755659-52755678 Msa0555020:intron 55.0%
! GATGTCCCGGTGGATTTGGA+TGG - chr4_1:52755667-52755686 None:intergenic 55.0%
CCAAGGATGTGATACGGGTC+AGG - chr4_1:52756119-52756138 None:intergenic 55.0%
CCTGACCCGTATCACATCCT+TGG + chr4_1:52756116-52756135 Msa0555020:CDS 55.0%
CACATCCTTGGAGCTGTCCA+TGG + chr4_1:52756128-52756147 Msa0555020:CDS 55.0%
TTGCACCATGGACAGCTCCA+AGG - chr4_1:52756136-52756155 None:intergenic 55.0%
GGAGCTGTCCATGGTGCAAT+TGG + chr4_1:52756137-52756156 Msa0555020:CDS 55.0%
TGATGGGATGCCAGCCATGA+CGG - chr4_1:52756629-52756648 None:intergenic 55.0%
GGTAGCGAACTCCACTTTGC+GGG + chr4_1:52756731-52756750 Msa0555020:intron 55.0%
AGAGGAAAGCCTCGGCTCTA+AGG - chr4_1:52756914-52756933 None:intergenic 55.0%
GTGGGTGGCCATTTGGGAAA+AGG + chr4_1:52758041-52758060 Msa0555020:intron 55.0%
!! AAGCTTTGGAAAGGGGGGAG+GGG - chr4_1:52759383-52759402 None:intergenic 55.0%
!! CAAGCTTTGGAAAGGGGGGA+GGG - chr4_1:52759384-52759403 None:intergenic 55.0%
!! ACAAGCTTTGGAAAGGGGGG+AGG - chr4_1:52759385-52759404 None:intergenic 55.0%
!! GCACGTTGAGTTGATCACCG+AGG + chr4_1:52759578-52759597 Msa0555020:CDS 55.0%
CGAGGTCGCAGACTCATTGA+TGG + chr4_1:52759596-52759615 Msa0555020:CDS 55.0%
! TGCAGGAGCTTTAGTGCACC+AGG - chr4_1:52759773-52759792 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr4_1:52759876-52759895 None:intergenic 55.0%
AATTACCCAAGGGGGAGCCT+TGG - chr4_1:52759930-52759949 None:intergenic 55.0%
GGAGCTTCTCTCCAGCTACA+TGG - chr4_1:52760155-52760174 None:intergenic 55.0%
AAGCTCCAGAGAGATCTGCC+AGG + chr4_1:52760168-52760187 Msa0555020:intron 55.0%
!! ACCACCCATTAGGGGTGTTG+AGG + chr4_1:52760814-52760833 Msa0555020:intron 55.0%
!! CCACCCATTAGGGGTGTTGA+GGG + chr4_1:52760815-52760834 Msa0555020:intron 55.0%
!! TTAGTGGGAGGCACCCTCAT+CGG + chr4_1:52760866-52760885 Msa0555020:intron 55.0%
! CAGAGCTAGCTTAAGAGGCG+AGG + chr4_1:52761556-52761575 Msa0555020:intron 55.0%
! GAGTCAAAAGGGGGTGCATC+GGG + chr4_1:52761801-52761820 Msa0555020:intron 55.0%
! AGTCAAAAGGGGGTGCATCG+GGG + chr4_1:52761802-52761821 Msa0555020:intron 55.0%
! GGCTTCCCTTCTAGTTGAGG+AGG + chr4_1:52762025-52762044 Msa0555020:CDS 55.0%
! GGTGAGGTACTTGCAGACTC+TGG + chr4_1:52762158-52762177 Msa0555020:CDS 55.0%
ACTGGCATCTTCCCTGCTTG+TGG + chr4_1:52762606-52762625 Msa0555020:intron 55.0%
CTGGCATCTTCCCTGCTTGT+GGG + chr4_1:52762607-52762626 Msa0555020:intron 55.0%
TAGGCTGCCATCTTAGCTCG+TGG + chr4_1:52762848-52762867 Msa0555020:intron 55.0%
CACAGGCAGATGAAGGAGAG+AGG - chr4_1:52763747-52763766 None:intergenic 55.0%
GTTCGGACGGTAAGAAGCAG+AGG - chr4_1:52763795-52763814 None:intergenic 55.0%
CTGCTTCTTACCGTCCGAAC+AGG + chr4_1:52763795-52763814 Msa0555020:intron 55.0%
CTGGGGACCAAACAAGTGAG+TGG + chr4_1:52763848-52763867 Msa0555020:intron 55.0%
CCCTGCAGCAACAACCAGTA+AGG - chr4_1:52764673-52764692 None:intergenic 55.0%
GAGAAAGAAAGCCGAGGCAG+TGG + chr4_1:52765181-52765200 Msa0555020:CDS 55.0%
AATTCCAGAGGCCACTGCCT+CGG - chr4_1:52765195-52765214 None:intergenic 55.0%
!! CAGTGGCCTCTGGAATTGAC+TGG + chr4_1:52765198-52765217 Msa0555020:CDS 55.0%
GCCATCATCAAGATGCGGCA+AGG + chr4_1:52766184-52766203 Msa0555020:CDS 55.0%
CCAACTGAGCTATGCTCACG+GGG - chr4_1:52766552-52766571 None:intergenic 55.0%
GCCAACTGAGCTATGCTCAC+GGG - chr4_1:52766553-52766572 None:intergenic 55.0%
GTGAGCATAGCTCAGTTGGC+AGG + chr4_1:52766553-52766572 Msa0555020:intron 55.0%
GCAGGGACATTGCAGCATAC+AGG + chr4_1:52766571-52766590 Msa0555020:intron 55.0%
CATTGCAGCATACAGGGGTC+GGG + chr4_1:52766578-52766597 Msa0555020:intron 55.0%
ATTGCAGCATACAGGGGTCG+GGG + chr4_1:52766579-52766598 Msa0555020:intron 55.0%
GGTGCACTGGAAAAAGGCTC+AGG - chr4_1:52766926-52766945 None:intergenic 55.0%
! GACCAGGATTAGTGGTGCAC+TGG - chr4_1:52766939-52766958 None:intergenic 55.0%
AGGATGAAGCCGGTGCATCT+AGG - chr4_1:52766961-52766980 None:intergenic 55.0%
AGCCTTTGTCCCAGATGCTC+TGG + chr4_1:52767002-52767021 Msa0555020:intron 55.0%
! TGCCAGAGCATCTGGGACAA+AGG - chr4_1:52767007-52767026 None:intergenic 55.0%
ACTATCACCACTAGCGGCAC+TGG + chr4_1:52767557-52767576 Msa0555020:intron 55.0%
CTATCACCACTAGCGGCACT+GGG + chr4_1:52767558-52767577 Msa0555020:intron 55.0%
TATCACCACTAGCGGCACTG+GGG + chr4_1:52767559-52767578 Msa0555020:intron 55.0%
GCTCGGGCATACCATCATGT+TGG + chr4_1:52767910-52767929 Msa0555020:CDS 55.0%
CTGCGAAGGTTGCAGTAACC+AGG - chr4_1:52768048-52768067 None:intergenic 55.0%
TGTAAGCTGCCTCTCTGCGA+AGG - chr4_1:52768062-52768081 None:intergenic 55.0%
!! TGCGTCGTCTTCGGTGTCGA+CGG - chr4_1:52753999-52754018 None:intergenic 60.0%
TACCGGTGAGGTTGTTGCGG+TGG - chr4_1:52754250-52754269 None:intergenic 60.0%
GACGGTACCGCAGGCCAAAA+TGG - chr4_1:52756611-52756630 None:intergenic 60.0%
TTTGGCCTGCGGTACCGTCA+TGG + chr4_1:52756612-52756631 Msa0555020:intron 60.0%
!! GAAAGCCTCGGCTCTAAGGC+TGG - chr4_1:52756910-52756929 None:intergenic 60.0%
!! AGCTTTGGAAAGGGGGGAGG+GGG - chr4_1:52759382-52759401 None:intergenic 60.0%
CTCCTGCATACGCAGGGTCT+GGG + chr4_1:52759785-52759804 Msa0555020:intron 60.0%
TTCCCAGACCCTGCGTATGC+AGG - chr4_1:52759790-52759809 None:intergenic 60.0%
TGCATACGCAGGGTCTGGGA+AGG + chr4_1:52759789-52759808 Msa0555020:intron 60.0%
GCATACGCAGGGTCTGGGAA+GGG + chr4_1:52759790-52759809 Msa0555020:intron 60.0%
CATACGCAGGGTCTGGGAAG+GGG + chr4_1:52759791-52759810 Msa0555020:intron 60.0%
TGGGAAGGGGTCCCACCAAT+TGG + chr4_1:52759804-52759823 Msa0555020:intron 60.0%
ACCACTTTACCGCTGCGCCA+AGG + chr4_1:52759910-52759929 Msa0555020:intron 60.0%
CCCTCAACACCCCTAATGGG+TGG - chr4_1:52760818-52760837 None:intergenic 60.0%
!! TAGTGGGAGGCACCCTCATC+GGG + chr4_1:52760867-52760886 Msa0555020:intron 60.0%
! GCTCGTGGTCTTGAGGGTAC+TGG + chr4_1:52762863-52762882 Msa0555020:intron 60.0%
GGGCAGTTCGCAGAAGCTAG+AGG - chr4_1:52763774-52763793 None:intergenic 60.0%
AGGTACGGCCTTGGTCAACC+TGG + chr4_1:52766353-52766372 Msa0555020:intron 60.0%
! GAAGTCTGAAACCCAGCGCC+AGG - chr4_1:52766374-52766393 None:intergenic 60.0%
CCCCGTGAGCATAGCTCAGT+TGG + chr4_1:52766549-52766568 Msa0555020:intron 60.0%
CTGGAAAAAGGCTCAGGCCG+AGG - chr4_1:52766920-52766939 None:intergenic 60.0%
! AAGCCGGTGCATCTAGGACC+AGG - chr4_1:52766955-52766974 None:intergenic 60.0%
!! CCTCGGCTCTAAGGCTGGCA+GGG - chr4_1:52756905-52756924 None:intergenic 65.0%
!! GCTTTGGAAAGGGGGGAGGG+GGG - chr4_1:52759381-52759400 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+TGG + chr4_1:52759784-52759803 Msa0555020:intron 65.0%
GCCTTGGCGCAGCGGTAAAG+TGG - chr4_1:52759914-52759933 None:intergenic 65.0%
!! CTCTAAGGCTAGCACCGGGC+AGG - chr4_1:52763189-52763208 None:intergenic 65.0%
AAAGCCGAGGCAGTGGCCTC+TGG + chr4_1:52765188-52765207 Msa0555020:CDS 65.0%
GCCTTGGTCAACCTGGCGCT+GGG + chr4_1:52766360-52766379 Msa0555020:CDS 65.0%
! ACCCAGCGCCAGGTTGACCA+AGG - chr4_1:52766364-52766383 None:intergenic 65.0%
! TCAGTCCCCAGTGCCGCTAG+TGG - chr4_1:52767567-52767586 None:intergenic 65.0%
GCCTGCGGTACCGTCATGGC+TGG + chr4_1:52756616-52756635 Msa0555020:intron 70.0%
GCCAGCCATGACGGTACCGC+AGG - chr4_1:52756620-52756639 None:intergenic 70.0%
CCCTGCCAGCCTTAGAGCCG+AGG + chr4_1:52756902-52756921 Msa0555020:intron 70.0%
!! GCCTCGGCTCTAAGGCTGGC+AGG - chr4_1:52756906-52756925 None:intergenic 70.0%
AAGGGGGAGCCTTGGCGCAG+CGG - chr4_1:52759922-52759941 None:intergenic 70.0%
CTGCGCCAAGGCTCCCCCTT+GGG + chr4_1:52759922-52759941 Msa0555020:intron 70.0%
GGCCTTGGTCAACCTGGCGC+TGG + chr4_1:52766359-52766378 Msa0555020:CDS 70.0%
AGGGGTCGGGGTTCGAACCC+CGG + chr4_1:52766591-52766610 Msa0555020:intron 70.0%
GCTGCGCCAAGGCTCCCCCT+TGG + chr4_1:52759921-52759940 Msa0555020:intron 75.0%
! AGGGGGGAGGGGGGACGTGC+TGG - chr4_1:52759372-52759391 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 52753916 52768466 52753916 ID=Msa0555020;Name=Msa0555020
chr4_1 mRNA 52753916 52768466 52753916 ID=Msa0555020-mRNA-1;Parent=Msa0555020;Name=Msa0555020-mRNA-1;_AED=0.24;_eAED=0.26;_QI=16|0.86|0.81|1|1|1|16|308|982
chr4_1 exon 52753916 52754266 52753916 ID=Msa0555020-mRNA-1:exon:15273;Parent=Msa0555020-mRNA-1
chr4_1 exon 52754608 52754716 52754608 ID=Msa0555020-mRNA-1:exon:15274;Parent=Msa0555020-mRNA-1
chr4_1 exon 52755195 52755308 52755195 ID=Msa0555020-mRNA-1:exon:15275;Parent=Msa0555020-mRNA-1
chr4_1 exon 52756071 52756252 52756071 ID=Msa0555020-mRNA-1:exon:15276;Parent=Msa0555020-mRNA-1
chr4_1 exon 52757642 52757834 52757642 ID=Msa0555020-mRNA-1:exon:15277;Parent=Msa0555020-mRNA-1
chr4_1 exon 52758538 52758786 52758538 ID=Msa0555020-mRNA-1:exon:15278;Parent=Msa0555020-mRNA-1
chr4_1 exon 52759540 52759686 52759540 ID=Msa0555020-mRNA-1:exon:15279;Parent=Msa0555020-mRNA-1
chr4_1 exon 52761069 52761147 52761069 ID=Msa0555020-mRNA-1:exon:15280;Parent=Msa0555020-mRNA-1
chr4_1 exon 52761982 52762340 52761982 ID=Msa0555020-mRNA-1:exon:15281;Parent=Msa0555020-mRNA-1
chr4_1 exon 52763037 52763140 52763037 ID=Msa0555020-mRNA-1:exon:15282;Parent=Msa0555020-mRNA-1
chr4_1 exon 52765127 52765250 52765127 ID=Msa0555020-mRNA-1:exon:15283;Parent=Msa0555020-mRNA-1
chr4_1 exon 52765350 52765617 52765350 ID=Msa0555020-mRNA-1:exon:15284;Parent=Msa0555020-mRNA-1
chr4_1 exon 52765825 52765939 52765825 ID=Msa0555020-mRNA-1:exon:15285;Parent=Msa0555020-mRNA-1
chr4_1 exon 52766074 52766264 52766074 ID=Msa0555020-mRNA-1:exon:15286;Parent=Msa0555020-mRNA-1
chr4_1 exon 52766355 52766467 52766355 ID=Msa0555020-mRNA-1:exon:15287;Parent=Msa0555020-mRNA-1
chr4_1 exon 52767892 52768466 52767892 ID=Msa0555020-mRNA-1:exon:15288;Parent=Msa0555020-mRNA-1
chr4_1 five_prime_UTR 52753916 52753931 52753916 ID=Msa0555020-mRNA-1:five_prime_utr;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52753932 52754266 52753932 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52754608 52754716 52754608 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52755195 52755308 52755195 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52756071 52756252 52756071 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52757642 52757834 52757642 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52758538 52758786 52758538 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52759540 52759686 52759540 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52761069 52761147 52761069 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52761982 52762340 52761982 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52763037 52763140 52763037 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52765127 52765250 52765127 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52765350 52765617 52765350 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52765825 52765939 52765825 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52766074 52766264 52766074 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52766355 52766467 52766355 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 CDS 52767892 52768158 52767892 ID=Msa0555020-mRNA-1:cds;Parent=Msa0555020-mRNA-1
chr4_1 three_prime_UTR 52768159 52768466 52768159 ID=Msa0555020-mRNA-1:three_prime_utr;Parent=Msa0555020-mRNA-1
Gene Sequence

>Msa0555020

ATGGAAGTGATTAACCAGAAGGAGGATGAAGATCATCCAAGGGCGATAGAAGACAACGACAACGCCGTCGACACCGAAGACGACGCATTGTACGGTGCGGAAGAGAACGGAGAAGAAGAAGACGCGTCGGAGAATGAAGAAGAAGAGGAAGGAGAAAACGATACAGTGGAGGAAGATCAATTCAGGTTCGGCAACGGTGTAAATCCGTTGGACTTCGTACGTAACAGTGATCCCAGTGTTCAATTGTACCAGAAATTGGAAGACTACCACCAGAAATCGATGGAGTACCGAGCTCTCGACAACAGAAAGCGAAAACCACCGCAACAACCTCACCGTGAAGAGACTTCTTCTAAGAAGGCAAGGGAAGATGATATTTCTGGGGTAGGCCTAGCTGATGTAGAGGAGGAATTAATGAATTTGGGACAGGGCAAGAGGTCAAAAAAGAAGCGGTCAAAAAAAAGAGGTAGGCAAAAAGGATCAAAGAAGAAACTTGACGAAAAGATATCACAAATGTTCGGTGATGCCCTCATGCACTATACGAGTCGCCGTTATGACACGGCTATAGATGTGTTGCATGAAGTTGTCAGGCTGGAACCAAATTTACCTGACCCGTATCACATCCTTGGAGCTGTCCATGGTGCAATTGGGGATCATGAAAATGAAATGGGTTTTTACATGATTTATGCTCATTTGACTCCAAAAGATTCATCACTTTGGGAAAGGCTCTTTGTGTGGTCCATAAAACAAGGTGATGCTGGTCAAGCCAGTTATTGTATTTCGAAAGCAATAAAAGCAGACCCCCAAGATATTAGTCTTAGAAGGCATCAAGCATTGCTTTATGCTGAAAGTCAAAATTATCAAAAAGCTGCTGAGGCATATGAACAAATACATCAACTTTGTCGTGAAGATGATGCACTAAAAGAAGCAGCTAAGTTCTACCAAAAGTGTGGTCAAGTTGAGCGCTCAATTTGCATTCTCGAAGACTATCTGAAGAGTAAACCAGATGGAGTAAATGCAAGTGTAGTTGATCTACTTGGTACCATATTGATGGAAATTAAGGCGCATGACAGAGCTCTTCAGTTCATAGAACAATCTCAAGTGGTTGGGAAAGAATTGCCCTTAAATTTGAAAGTTAAAGCTGGAATCTGCCATGTTCATCTTGGAAACATGGAAATCGCTCAGGTTTTCTTCAATGATTTGAAACCAGAGAATGCAAGCAAGCACGTTGAGTTGATCACCGAGGTCGCAGACTCATTGATGGGTCTTGGACATTATAATTCTGCATTGAATTATTTTAAGATGTTGGAAGGAAATAGTAAAAATGAAAATGGTCTTCTGTATTTGAAAATTGCTAGATGTTATCGATCCTTGGAAGAAAGGAAACAAGCAATTATCTCTTTTTACAAAGCCCTAGAAATACTACAAGACAATGTTGAAGCACGCATAGCTTTGGCTTCCCTTCTAGTTGAGGAGGGGAAAGAAAATGAAGCCATTTCCTTGTTGTCTCCTCCAAAGGATTCTGGTACTTGTAAAAATGTTTTCTTTCTTTGTGATCAAAGTTCTTCCATGGAGATATATACTAATGGTGAGGTACTTGCAGACTCTGGTGAAGCACATTCTGAAAAGTCAAATAGATGGTGGGTTGATGTGAGAATAAAACTTAAGCTCTGTAACATTTTTCAGATTAGAGGGATGCTTAATGATTTTGTGAATGTAAGTCTCCCTTTGGTACACGAATCTCTGAATGTTCCAGCTCCTAGACGAAAGTTTTATTTCTATGGTGTATTTGGTTTGGATAAGAATGTCTACATTGATTATTATCAAGCATGTCTCTTTGCACTTGCACTTTTTGTGATGGCATTGAGTTTATGGTCGAAAGCTTCCAGGGCAAAAAAGTTGCTCCAGAAAAAGGCAATTGAGAAGGAGAGAAAGAAAGCCGAGGCAGTGGCCTCTGGAATTGACTGGCTAAGTGATGACTCAGATGATGAGCCTCAGGAACCTAACACAGATTCTCCCTTGTGTAATCTTCACAAAGATGAAGGATATCACCAGCTAATCATTGATGTTAGTACTTCTATCACTTTTTCTGTATCCCCTTTCCTTTTTAATGTGCGCCACCTTAATATGAATGTACAGTTGTGCAATGCATTAGCATCCTTGCAAAGGTATAGCGAAGCATTGGAGATTATCAATTTAACTCTAAGATTGGCTCATACTTCCCTGTCTACTGAGAAGAATGAGAAGCTTCGATCTCTTGAAGTTCAAATGGCATACAACACCACAGATCCTAAACAAGGTTTTGATTGTGTAAAAGACATGGTTCAACAACATGCACATAGTGTTGCAGCTTGGAATTGCTACTACAAGGTCGTATCGAGACTGGAAAACCGAGATACAAGGCATGACAAATTTTTACGTTCCATGCAAGGAAAATTTGTCGATTGTGTGCCTCCTATCCTCATTTCTGCGCATCAGTTTACTCTATGTAGCCATCATCAAGATGCGGCAAGGAAATATCTTGAAGCTTATAAACTTCTGCCTGAGAATCCATTGGTTAATCTTTGTGTCGGTACGGCCTTGGTCAACCTGGCGCTGGGTTTCAGACTTCAAAATAAGCATCAGTGTGTTGTACAAGGTTTAGCATTCCTCTACAATAATTTGGAGATCTGCAAGAACAGTCAGGAATCTTTATACAACATAGCTCGGGCATACCATCATGTTGGTCTTGTAACACTGGCAGCAATATATTATGAGAAGGTGATTGCTATTAGGGAGAGAGACTATCCAATTCCTAAACTTCAAAATGAGAGTATTGATGTCATTGAAAATCACAAACCTGGTTACTGCAACCTTCGCAGAGAGGCAGCTTACAATCTGCATTTAATCTACAAAAGGAGTGGGGCTGTCGATCTTGCTAGACAAGTTTTGAAAGATCATTGTTCCGTTTGA
Protein sequence

>Msa0555020

MEVINQKEDEDHPRAIEDNDNAVDTEDDALYGAEENGEEEDASENEEEEEGENDTVEEDQFRFGNGVNPLDFVRNSDPSVQLYQKLEDYHQKSMEYRALDNRKRKPPQQPHREETSSKKAREDDISGVGLADVEEELMNLGQGKRSKKKRSKKRGRQKGSKKKLDEKISQMFGDALMHYTSRRYDTAIDVLHEVVRLEPNLPDPYHILGAVHGAIGDHENEMGFYMIYAHLTPKDSSLWERLFVWSIKQGDAGQASYCISKAIKADPQDISLRRHQALLYAESQNYQKAAEAYEQIHQLCREDDALKEAAKFYQKCGQVERSICILEDYLKSKPDGVNASVVDLLGTILMEIKAHDRALQFIEQSQVVGKELPLNLKVKAGICHVHLGNMEIAQVFFNDLKPENASKHVELITEVADSLMGLGHYNSALNYFKMLEGNSKNENGLLYLKIARCYRSLEERKQAIISFYKALEILQDNVEARIALASLLVEEGKENEAISLLSPPKDSGTCKNVFFLCDQSSSMEIYTNGEVLADSGEAHSEKSNRWWVDVRIKLKLCNIFQIRGMLNDFVNVSLPLVHESLNVPAPRRKFYFYGVFGLDKNVYIDYYQACLFALALFVMALSLWSKASRAKKLLQKKAIEKERKKAEAVASGIDWLSDDSDDEPQEPNTDSPLCNLHKDEGYHQLIIDVSTSITFSVSPFLFNVRHLNMNVQLCNALASLQRYSEALEIINLTLRLAHTSLSTEKNEKLRSLEVQMAYNTTDPKQGFDCVKDMVQQHAHSVAAWNCYYKVVSRLENRDTRHDKFLRSMQGKFVDCVPPILISAHQFTLCSHHQDAARKYLEAYKLLPENPLVNLCVGTALVNLALGFRLQNKHQCVVQGLAFLYNNLEICKNSQESLYNIARAYHHVGLVTLAAIYYEKVIAIRERDYPIPKLQNESIDVIENHKPGYCNLRREAAYNLHLIYKRSGAVDLARQVLKDHCSV*