Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0920710 | XP_004497487.1 | 68.929 | 560 | 158 | 2 | 1 | 548 | 1 | 556 | 0.0 | 806 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0920710 | sp|Q6Q3H3|TPSGD_VITVI | 51.565 | 543 | 245 | 3 | 17 | 548 | 22 | 557 | 0.0 | 590 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0894010 | Msa0920710 | 0.836565 | 8.686365e-57 | -8.615850e-47 |
Msa0894080 | Msa0920710 | 0.834769 | 2.474832e-56 | -8.615850e-47 |
Msa0894100 | Msa0920710 | 0.801963 | 7.026351e-49 | -8.615850e-47 |
Msa0920680 | Msa0920710 | 0.806517 | 7.915311e-50 | -8.615850e-47 |
Msa0920710 | Msa0920720 | 0.863316 | 2.715583e-64 | -8.615850e-47 |
Msa0920710 | Msa0920760 | 0.823073 | 1.685359e-53 | -8.615850e-47 |
Msa0920710 | Msa0920770 | 0.810447 | 1.147664e-50 | -8.615850e-47 |
Msa0920710 | Msa0920810 | 0.803542 | 3.317272e-49 | -8.615850e-47 |
Msa0920710 | Msa0920820 | 0.817735 | 2.826827e-52 | -8.615850e-47 |
Msa0920710 | Msa0959170 | 0.813058 | 3.100959e-51 | -8.615850e-47 |
Msa0920710 | Msa0959180 | 0.854227 | 1.416035e-61 | -8.615850e-47 |
Msa0920710 | Msa0959190 | 0.876928 | 9.453209e-69 | -8.615850e-47 |
Msa0920710 | Msa0959210 | 0.826022 | 3.407191e-54 | -8.615850e-47 |
Msa0920710 | Msa0959250 | 0.830987 | 2.154175e-55 | -8.615850e-47 |
Msa0920710 | Msa0959280 | 0.864595 | 1.086099e-64 | -8.615850e-47 |
Msa0920710 | Msa0995410 | 0.835469 | 1.647970e-56 | -8.615850e-47 |
Msa0920710 | Msa0995420 | 0.805194 | 1.501331e-49 | -8.615850e-47 |
Msa0920710 | Msa0995430 | 0.836624 | 8.389012e-57 | -8.615850e-47 |
Msa0920710 | Msa0995440 | 0.827574 | 1.451430e-54 | -8.615850e-47 |
Msa0920710 | Msa0995460 | 0.812994 | 3.202752e-51 | -8.615850e-47 |
Msa0920710 | Msa0995470 | 0.820019 | 8.555813e-53 | -8.615850e-47 |
Msa0920710 | Msa0995480 | 0.821229 | 4.510819e-53 | -8.615850e-47 |
Msa0920710 | Msa0995490 | 0.825368 | 4.868582e-54 | -8.615850e-47 |
Msa0920710 | Msa0995500 | 0.807316 | 5.365761e-50 | -8.615850e-47 |
Msa0920710 | Msa0995600 | 0.811785 | 5.885221e-51 | -8.615850e-47 |
Msa0920710 | Msa0995630 | 0.803754 | 2.998122e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0920710 | MtrunA17_Chr7g0237001 | 64.928 | 556 | 184 | 2 | 1 | 548 | 1 | 553 | 0.0 | 754 |
Msa0920710 | MtrunA17_Chr7g0237041 | 64.928 | 556 | 184 | 2 | 1 | 548 | 1 | 553 | 0.0 | 754 |
Msa0920710 | MtrunA17_Chr7g0237081 | 64.928 | 556 | 184 | 2 | 1 | 548 | 1 | 553 | 0.0 | 754 |
Msa0920710 | MtrunA17_Chr7g0237051 | 64.928 | 556 | 184 | 2 | 1 | 548 | 1 | 553 | 0.0 | 754 |
Msa0920710 | MtrunA17_Chr7g0236991 | 64.928 | 556 | 184 | 2 | 1 | 548 | 1 | 553 | 0.0 | 754 |
Msa0920710 | MtrunA17_Chr6g0466051 | 64.821 | 560 | 178 | 3 | 1 | 548 | 1 | 553 | 0.0 | 747 |
Msa0920710 | MtrunA17_Chr6g0465911 | 64.643 | 560 | 179 | 3 | 1 | 548 | 1 | 553 | 0.0 | 745 |
Msa0920710 | MtrunA17_Chr5g0425371 | 64.107 | 560 | 182 | 3 | 1 | 548 | 1 | 553 | 0.0 | 738 |
Msa0920710 | MtrunA17_Chr6g0465441 | 63.571 | 560 | 185 | 3 | 1 | 548 | 1 | 553 | 0.0 | 731 |
Msa0920710 | MtrunA17_Chr6g0451711 | 62.923 | 561 | 191 | 3 | 1 | 548 | 1 | 557 | 0.0 | 729 |
Msa0920710 | MtrunA17_Chr4g0024691 | 64.663 | 549 | 186 | 2 | 8 | 548 | 13 | 561 | 0.0 | 723 |
Msa0920710 | MtrunA17_Chr3g0105071 | 62.478 | 557 | 200 | 2 | 1 | 548 | 1 | 557 | 0.0 | 722 |
Msa0920710 | MtrunA17_Chr3g0082691 | 62.821 | 546 | 194 | 2 | 12 | 548 | 8 | 553 | 0.0 | 713 |
Msa0920710 | MtrunA17_Chr6g0465851 | 65.326 | 522 | 165 | 2 | 39 | 548 | 1 | 518 | 0.0 | 702 |
Msa0920710 | MtrunA17_Chr5g0431571 | 62.591 | 548 | 188 | 2 | 12 | 546 | 4 | 547 | 0.0 | 692 |
Msa0920710 | MtrunA17_Chr7g0237011 | 65.663 | 498 | 163 | 1 | 59 | 548 | 1 | 498 | 0.0 | 689 |
Msa0920710 | MtrunA17_Chr7g0236961 | 65.462 | 498 | 164 | 1 | 59 | 548 | 1 | 498 | 0.0 | 687 |
Msa0920710 | MtrunA17_Chr5g0431651 | 61.355 | 546 | 201 | 2 | 13 | 548 | 7 | 552 | 0.0 | 686 |
Msa0920710 | MtrunA17_Chr4g0042111 | 55.636 | 550 | 233 | 4 | 9 | 548 | 14 | 562 | 0.0 | 622 |
Msa0920710 | MtrunA17_Chr7g0236971 | 69.077 | 401 | 124 | 0 | 148 | 548 | 1 | 401 | 0.0 | 600 |
Msa0920710 | MtrunA17_Chr6g0465981 | 65.000 | 380 | 114 | 3 | 1 | 368 | 1 | 373 | 4.14e-173 | 494 |
Msa0920710 | MtrunA17_Chr6g0465871 | 65.000 | 380 | 114 | 3 | 1 | 368 | 1 | 373 | 4.14e-173 | 494 |
Msa0920710 | MtrunA17_Chr6g0466081 | 65.000 | 380 | 114 | 3 | 1 | 368 | 1 | 373 | 4.14e-173 | 494 |
Msa0920710 | MtrunA17_Chr2g0319041 | 43.455 | 550 | 291 | 10 | 15 | 548 | 12 | 557 | 8.90e-160 | 467 |
Msa0920710 | MtrunA17_Chr8g0336181 | 44.000 | 550 | 292 | 9 | 13 | 548 | 9 | 556 | 2.42e-159 | 466 |
Msa0920710 | MtrunA17_Chr6g0466111 | 66.082 | 342 | 100 | 2 | 39 | 368 | 1 | 338 | 1.94e-156 | 450 |
Msa0920710 | MtrunA17_Chr6g0465931 | 65.789 | 342 | 101 | 2 | 39 | 368 | 1 | 338 | 2.45e-155 | 447 |
Msa0920710 | MtrunA17_Chr2g0319051 | 42.690 | 513 | 280 | 7 | 48 | 548 | 4 | 514 | 4.29e-149 | 438 |
Msa0920710 | MtrunA17_Chr7g0237031 | 65.176 | 313 | 101 | 1 | 59 | 363 | 1 | 313 | 1.77e-145 | 421 |
Msa0920710 | MtrunA17_Chr7g0236951 | 64.856 | 313 | 102 | 1 | 59 | 363 | 1 | 313 | 6.48e-145 | 420 |
Msa0920710 | MtrunA17_Chr6g0466031 | 64.231 | 260 | 93 | 0 | 289 | 548 | 1 | 260 | 1.11e-120 | 356 |
Msa0920710 | MtrunA17_Chr5g0445511 | 65.966 | 238 | 81 | 0 | 144 | 381 | 2 | 239 | 3.50e-113 | 336 |
Msa0920710 | MtrunA17_Chr4g0008621 | 42.574 | 404 | 212 | 5 | 15 | 402 | 19 | 418 | 2.32e-109 | 333 |
Msa0920710 | MtrunA17_Chr7g0237061 | 60.769 | 260 | 79 | 2 | 289 | 548 | 1 | 237 | 5.75e-107 | 320 |
Msa0920710 | MtrunA17_Chr4g0023911 | 33.883 | 546 | 342 | 6 | 13 | 546 | 41 | 579 | 1.15e-103 | 323 |
Msa0920710 | MtrunA17_Chr2g0323151 | 35.699 | 465 | 288 | 4 | 68 | 526 | 1 | 460 | 2.35e-97 | 304 |
Msa0920710 | MtrunA17_Chr2g0319071 | 34.682 | 519 | 273 | 14 | 43 | 546 | 20 | 487 | 4.01e-97 | 303 |
Msa0920710 | MtrunA17_Chr2g0323131 | 34.719 | 481 | 309 | 5 | 49 | 526 | 67 | 545 | 1.73e-96 | 304 |
Msa0920710 | MtrunA17_Chr2g0310331 | 34.944 | 538 | 336 | 10 | 17 | 546 | 53 | 584 | 5.28e-93 | 296 |
Msa0920710 | MtrunA17_Chr7g0237021 | 68.605 | 172 | 54 | 0 | 377 | 548 | 1 | 172 | 4.87e-85 | 261 |
Msa0920710 | MtrunA17_Chr7g0236941 | 68.605 | 172 | 54 | 0 | 377 | 548 | 1 | 172 | 4.87e-85 | 261 |
Msa0920710 | MtrunA17_Chr8g0357411 | 30.561 | 553 | 361 | 7 | 7 | 546 | 45 | 587 | 1.67e-81 | 266 |
Msa0920710 | MtrunA17_Chr4g0048921 | 31.721 | 517 | 328 | 7 | 44 | 546 | 64 | 569 | 1.18e-79 | 260 |
Msa0920710 | MtrunA17_Chr6g0465941 | 63.953 | 172 | 62 | 0 | 377 | 548 | 1 | 172 | 5.04e-78 | 243 |
Msa0920710 | MtrunA17_Chr6g0466121 | 63.953 | 172 | 62 | 0 | 377 | 548 | 1 | 172 | 5.04e-78 | 243 |
Msa0920710 | MtrunA17_Chr6g0465991 | 63.953 | 172 | 62 | 0 | 377 | 548 | 1 | 172 | 5.04e-78 | 243 |
Msa0920710 | MtrunA17_Chr6g0466091 | 63.953 | 172 | 62 | 0 | 377 | 548 | 1 | 172 | 5.04e-78 | 243 |
Msa0920710 | MtrunA17_Chr6g0465881 | 63.372 | 172 | 63 | 0 | 377 | 548 | 1 | 172 | 2.95e-77 | 241 |
Msa0920710 | MtrunA17_Chr2g0319081 | 39.450 | 327 | 176 | 8 | 225 | 548 | 120 | 427 | 2.55e-75 | 245 |
Msa0920710 | MtrunA17_Chr2g0319081 | 36.190 | 105 | 64 | 2 | 1 | 103 | 3 | 106 | 3.81e-14 | 74.7 |
Msa0920710 | MtrunA17_Chr5g0445501 | 62.209 | 172 | 65 | 0 | 377 | 548 | 1 | 172 | 1.03e-74 | 234 |
Msa0920710 | MtrunA17_Chr7g0237071 | 59.901 | 202 | 73 | 1 | 59 | 252 | 1 | 202 | 6.80e-74 | 234 |
Msa0920710 | MtrunA17_Chr6g0466021 | 58.654 | 208 | 67 | 3 | 1 | 196 | 1 | 201 | 8.84e-73 | 230 |
Msa0920710 | MtrunA17_Chr4g0048911 | 29.283 | 502 | 333 | 8 | 55 | 540 | 61 | 556 | 7.84e-71 | 237 |
Msa0920710 | MtrunA17_Chr2g0310401 | 32.471 | 425 | 282 | 4 | 125 | 546 | 8 | 430 | 6.75e-70 | 231 |
Msa0920710 | MtrunA17_Chr7g0236921 | 63.924 | 158 | 53 | 1 | 395 | 548 | 1 | 158 | 1.13e-69 | 221 |
Msa0920710 | MtrunA17_Chr7g0236931 | 61.039 | 154 | 57 | 1 | 395 | 548 | 1 | 151 | 4.54e-64 | 206 |
Msa0920710 | MtrunA17_Chr3g0108941 | 28.317 | 505 | 342 | 9 | 54 | 542 | 13 | 513 | 3.49e-61 | 210 |
Msa0920710 | MtrunA17_Chr2g0280581 | 27.586 | 522 | 337 | 9 | 47 | 539 | 9 | 518 | 7.20e-61 | 209 |
Msa0920710 | MtrunA17_Chr3g0109031 | 28.980 | 490 | 327 | 8 | 54 | 526 | 13 | 498 | 9.81e-61 | 209 |
Msa0920710 | MtrunA17_Chr3g0105691 | 28.953 | 487 | 331 | 7 | 54 | 526 | 46 | 531 | 4.53e-60 | 208 |
Msa0920710 | MtrunA17_Chr3g0109001 | 28.807 | 486 | 324 | 8 | 54 | 521 | 13 | 494 | 1.24e-59 | 206 |
Msa0920710 | MtrunA17_Chr3g0109021 | 28.866 | 485 | 324 | 8 | 54 | 521 | 13 | 493 | 2.16e-59 | 205 |
Msa0920710 | MtrunA17_Chr6g0477111 | 28.392 | 479 | 327 | 7 | 68 | 531 | 1 | 478 | 6.15e-59 | 203 |
Msa0920710 | MtrunA17_Chr3g0108991 | 28.484 | 488 | 332 | 8 | 54 | 526 | 13 | 498 | 1.43e-58 | 203 |
Msa0920710 | MtrunA17_Chr3g0108951 | 28.484 | 488 | 332 | 8 | 54 | 526 | 13 | 498 | 1.43e-58 | 203 |
Msa0920710 | MtrunA17_Chr3g0099031 | 28.373 | 504 | 342 | 9 | 54 | 542 | 13 | 512 | 2.45e-57 | 199 |
Msa0920710 | MtrunA17_Chr3g0109011 | 27.941 | 476 | 323 | 7 | 68 | 526 | 1 | 473 | 6.42e-57 | 198 |
Msa0920710 | MtrunA17_Chr3g0108971 | 28.059 | 474 | 325 | 7 | 68 | 526 | 1 | 473 | 7.27e-57 | 198 |
Msa0920710 | MtrunA17_Chr6g0477121 | 28.818 | 406 | 278 | 6 | 124 | 521 | 9 | 411 | 5.31e-56 | 194 |
Msa0920710 | MtrunA17_Chr3g0108981 | 28.025 | 471 | 320 | 5 | 68 | 521 | 1 | 469 | 6.87e-56 | 195 |
Msa0920710 | MtrunA17_Chr3g0108961 | 28.025 | 471 | 320 | 5 | 68 | 521 | 1 | 469 | 6.87e-56 | 195 |
Msa0920710 | MtrunA17_Chr7g0233861 | 63.704 | 135 | 40 | 1 | 188 | 322 | 33 | 158 | 2.36e-52 | 176 |
Msa0920710 | MtrunA17_Chr7g0217361 | 32.667 | 300 | 201 | 1 | 247 | 545 | 8 | 307 | 3.05e-48 | 169 |
Msa0920710 | MtrunA17_Chr5g0445521 | 65.306 | 98 | 34 | 0 | 1 | 98 | 1 | 98 | 6.78e-40 | 140 |
Msa0920710 | MtrunA17_Chr7g0236981 | 65.306 | 98 | 31 | 1 | 1 | 98 | 1 | 95 | 7.08e-37 | 133 |
Msa0920710 | MtrunA17_Chr5g0445401 | 70.526 | 95 | 24 | 2 | 158 | 249 | 1 | 94 | 2.29e-34 | 125 |
Msa0920710 | MtrunA17_Chr8g0357231 | 29.070 | 258 | 181 | 2 | 290 | 546 | 1 | 257 | 9.95e-34 | 129 |
Msa0920710 | MtrunA17_Chr3g0082711 | 49.138 | 116 | 42 | 1 | 433 | 548 | 1 | 99 | 3.57e-32 | 119 |
Msa0920710 | MtrunA17_Chr3g0101681 | 23.892 | 519 | 339 | 15 | 70 | 546 | 276 | 780 | 2.02e-28 | 120 |
Msa0920710 | MtrunA17_Chr8g0357221 | 31.746 | 252 | 151 | 6 | 10 | 249 | 48 | 290 | 5.51e-27 | 110 |
Msa0920710 | MtrunA17_Chr2g0310121 | 22.649 | 521 | 343 | 16 | 70 | 546 | 275 | 779 | 6.56e-27 | 115 |
Msa0920710 | MtrunA17_Chr2g0281651 | 23.625 | 309 | 223 | 8 | 225 | 527 | 43 | 344 | 1.19e-19 | 91.7 |
Msa0920710 | MtrunA17_Chr7g0218001 | 28.102 | 274 | 157 | 6 | 68 | 302 | 344 | 616 | 1.29e-14 | 77.0 |
Msa0920710 | MtrunA17_Chr7g0259881 | 24.818 | 274 | 166 | 6 | 69 | 305 | 228 | 498 | 1.58e-13 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0920710 | AT5G23960.2 | 38.768 | 552 | 313 | 6 | 13 | 548 | 3 | 545 | 5.77e-138 | 411 |
Msa0920710 | AT5G23960.1 | 38.739 | 555 | 311 | 8 | 13 | 548 | 3 | 547 | 1.31e-136 | 407 |
Msa0920710 | AT3G14490.1 | 37.363 | 546 | 324 | 6 | 17 | 548 | 60 | 601 | 5.95e-121 | 369 |
Msa0920710 | AT1G70080.1 | 36.655 | 562 | 328 | 9 | 8 | 548 | 57 | 611 | 5.49e-120 | 367 |
Msa0920710 | AT1G31950.3 | 36.066 | 549 | 318 | 7 | 22 | 548 | 70 | 607 | 1.72e-119 | 365 |
Msa0920710 | AT3G14520.1 | 35.978 | 542 | 327 | 6 | 22 | 548 | 68 | 604 | 1.91e-119 | 365 |
Msa0920710 | AT1G31950.1 | 36.347 | 542 | 325 | 6 | 22 | 548 | 70 | 606 | 2.39e-118 | 362 |
Msa0920710 | AT3G14540.1 | 36.162 | 542 | 326 | 6 | 22 | 548 | 65 | 601 | 6.34e-116 | 356 |
Msa0920710 | AT3G29410.1 | 34.679 | 545 | 338 | 5 | 17 | 548 | 64 | 603 | 1.54e-111 | 345 |
Msa0920710 | AT3G32030.1 | 33.630 | 562 | 347 | 9 | 2 | 548 | 54 | 604 | 1.38e-110 | 342 |
Msa0920710 | AT4G20210.1 | 33.394 | 548 | 344 | 7 | 17 | 548 | 58 | 600 | 2.77e-106 | 331 |
Msa0920710 | AT3G29410.2 | 35.141 | 498 | 315 | 3 | 59 | 548 | 1 | 498 | 4.09e-106 | 327 |
Msa0920710 | AT1G33750.1 | 33.892 | 537 | 337 | 6 | 24 | 548 | 73 | 603 | 1.45e-105 | 329 |
Msa0920710 | AT5G44630.1 | 34.991 | 543 | 338 | 9 | 18 | 546 | 14 | 555 | 2.42e-105 | 327 |
Msa0920710 | AT4G13300.1 | 33.764 | 542 | 334 | 7 | 25 | 548 | 20 | 554 | 1.69e-104 | 325 |
Msa0920710 | AT4G20200.1 | 35.135 | 518 | 314 | 9 | 48 | 548 | 92 | 604 | 9.48e-104 | 325 |
Msa0920710 | AT1G31950.2 | 36.853 | 464 | 260 | 7 | 22 | 463 | 70 | 522 | 3.17e-100 | 313 |
Msa0920710 | AT4G13280.2 | 33.333 | 540 | 335 | 7 | 27 | 548 | 22 | 554 | 1.07e-99 | 312 |
Msa0920710 | AT2G23230.2 | 33.764 | 542 | 344 | 7 | 16 | 543 | 55 | 595 | 1.26e-99 | 314 |
Msa0920710 | AT4G15870.1 | 34.438 | 543 | 318 | 12 | 25 | 548 | 75 | 598 | 3.40e-99 | 313 |
Msa0920710 | AT3G29190.1 | 33.013 | 521 | 321 | 9 | 48 | 548 | 89 | 601 | 1.20e-97 | 308 |
Msa0920710 | AT3G14540.2 | 36.712 | 444 | 270 | 3 | 22 | 455 | 65 | 507 | 1.37e-97 | 306 |
Msa0920710 | AT2G23230.1 | 33.579 | 542 | 340 | 8 | 16 | 543 | 55 | 590 | 4.79e-97 | 307 |
Msa0920710 | AT4G20230.2 | 33.463 | 514 | 321 | 8 | 48 | 544 | 104 | 613 | 2.51e-94 | 300 |
Msa0920710 | AT4G20230.1 | 33.463 | 514 | 321 | 8 | 48 | 544 | 92 | 601 | 2.55e-94 | 300 |
Msa0920710 | AT3G29110.1 | 33.883 | 546 | 340 | 10 | 17 | 546 | 55 | 595 | 8.31e-94 | 298 |
Msa0920710 | AT1G66020.1 | 31.434 | 544 | 360 | 6 | 17 | 548 | 56 | 598 | 6.97e-90 | 288 |
Msa0920710 | AT1G48800.1 | 32.418 | 546 | 345 | 11 | 17 | 544 | 63 | 602 | 4.68e-89 | 286 |
Msa0920710 | AT4G13280.1 | 32.407 | 540 | 310 | 9 | 27 | 548 | 22 | 524 | 3.80e-88 | 281 |
Msa0920710 | AT5G48110.1 | 37.318 | 343 | 210 | 5 | 207 | 548 | 1 | 339 | 3.31e-84 | 265 |
Msa0920710 | AT4G16730.1 | 30.331 | 544 | 346 | 10 | 28 | 546 | 2 | 537 | 8.37e-84 | 271 |
Msa0920710 | AT1G48820.1 | 31.073 | 531 | 324 | 10 | 17 | 541 | 63 | 557 | 4.72e-83 | 269 |
Msa0920710 | AT4G16730.2 | 30.400 | 500 | 317 | 8 | 73 | 548 | 1 | 493 | 4.52e-80 | 259 |
Msa0920710 | AT4G16740.1 | 30.466 | 558 | 353 | 13 | 12 | 548 | 21 | 564 | 1.39e-79 | 260 |
Msa0920710 | AT1G61680.1 | 30.505 | 495 | 332 | 5 | 54 | 538 | 77 | 569 | 3.31e-77 | 254 |
Msa0920710 | AT2G24210.1 | 29.803 | 557 | 368 | 12 | 10 | 548 | 39 | 590 | 1.42e-75 | 250 |
Msa0920710 | AT1G61680.2 | 30.223 | 493 | 329 | 5 | 54 | 538 | 77 | 562 | 3.49e-75 | 249 |
Msa0920710 | AT3G25820.1 | 28.495 | 558 | 367 | 12 | 15 | 548 | 45 | 594 | 5.84e-70 | 236 |
Msa0920710 | AT3G25830.1 | 28.495 | 558 | 367 | 12 | 15 | 548 | 45 | 594 | 5.84e-70 | 236 |
Msa0920710 | AT3G25810.1 | 28.546 | 557 | 371 | 11 | 15 | 548 | 45 | 597 | 3.19e-67 | 228 |
Msa0920710 | AT4G16740.2 | 32.546 | 381 | 228 | 8 | 12 | 373 | 21 | 391 | 8.02e-60 | 203 |
Msa0920710 | AT1G66020.2 | 33.243 | 367 | 232 | 6 | 17 | 371 | 56 | 421 | 3.18e-59 | 203 |
Msa0920710 | AT3G25820.2 | 29.870 | 385 | 245 | 8 | 15 | 381 | 45 | 422 | 3.97e-51 | 181 |
Msa0920710 | AT4G16740.4 | 32.622 | 328 | 193 | 7 | 14 | 322 | 23 | 341 | 1.57e-49 | 175 |
Msa0920710 | AT4G16740.3 | 32.622 | 328 | 193 | 7 | 14 | 322 | 23 | 341 | 1.57e-49 | 175 |
Msa0920710 | AT3G25820.4 | 30.154 | 325 | 204 | 6 | 15 | 322 | 45 | 363 | 1.63e-43 | 159 |
Msa0920710 | AT3G25820.3 | 30.154 | 325 | 204 | 6 | 15 | 322 | 45 | 363 | 1.63e-43 | 159 |
Msa0920710 | AT1G79460.1 | 23.629 | 529 | 331 | 21 | 70 | 548 | 274 | 779 | 1.79e-24 | 108 |
Msa0920710 | AT1G61120.1 | 21.359 | 412 | 307 | 6 | 148 | 548 | 379 | 784 | 1.28e-17 | 87.0 |
Msa0920710 | AT4G02780.1 | 27.203 | 261 | 152 | 8 | 68 | 292 | 329 | 587 | 1.41e-12 | 70.9 |
Find 85 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6_2:-56088188 | Msa0920710:CDS |
TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6_2:+56087915 | None:intergenic |
ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6_2:+56088200 | None:intergenic |
AGCCTACATCAAAAGGAATT+TGG | 0.257080 | 6_2:-56088148 | Msa0920710:CDS |
TCCTTATGCTTCAGAATCTA+TGG | 0.272455 | 6_2:-56089589 | Msa0920710:intron |
CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6_2:-56086431 | Msa0920710:CDS |
ATCAAGTGGTTACCCAGTTT+TGG | 0.294586 | 6_2:-56086541 | Msa0920710:CDS |
TTGAGTAAAACAAATTATAT+TGG | 0.308224 | 6_2:-56089016 | Msa0920710:intron |
TAAGAAGTCGTAGCCAAAAC+TGG | 0.310089 | 6_2:+56086528 | None:intergenic |
GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6_2:+56087873 | None:intergenic |
CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6_2:-56089626 | Msa0920710:CDS |
AGACGAAATCAATCAAGTTT+TGG | 0.320601 | 6_2:-56089107 | Msa0920710:CDS |
AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6_2:-56089625 | Msa0920710:CDS |
TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6_2:+56089660 | None:intergenic |
TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6_2:-56087510 | Msa0920710:CDS |
TGAGGGAATATGATTTGAAT+AGG | 0.340079 | 6_2:-56086229 | Msa0920710:CDS |
TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6_2:+56088476 | None:intergenic |
GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6_2:-56087960 | Msa0920710:CDS |
ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6_2:-56086437 | Msa0920710:CDS |
TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6_2:+56089247 | None:intergenic |
AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6_2:-56086261 | Msa0920710:CDS |
CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6_2:-56089667 | Msa0920710:CDS |
GATTGATTCAATATGTCGTT+TGG | 0.383797 | 6_2:-56089149 | Msa0920710:CDS |
TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6_2:+56088201 | None:intergenic |
CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6_2:-56086247 | Msa0920710:CDS |
GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6_2:+56088222 | None:intergenic |
TAAAGCAACTTCGTGTAATC+CGG | 0.404734 | 6_2:+56087491 | None:intergenic |
GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6_2:-56087477 | Msa0920710:CDS |
TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6_2:+56086576 | None:intergenic |
ATAAATACTCAAATTTCTAC+AGG | 0.441751 | 6_2:+56085996 | None:intergenic |
AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6_2:-56086184 | Msa0920710:CDS |
TTCTGGTCACCTTGAGTCCA+TGG | 0.446304 | 6_2:-56088344 | Msa0920710:CDS |
TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6_2:-56086430 | Msa0920710:CDS |
ATTGATTCAATATGTCGTTT+GGG | 0.450241 | 6_2:-56089148 | Msa0920710:CDS |
GCTCCAAAGCCTACATCAAA+AGG | 0.450495 | 6_2:-56088155 | Msa0920710:CDS |
TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6_2:-56087522 | Msa0920710:CDS |
TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6_2:-56086517 | Msa0920710:CDS |
ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6_2:+56086602 | None:intergenic |
TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6_2:-56088197 | Msa0920710:CDS |
ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6_2:-56086516 | Msa0920710:CDS |
GATGACACATATGATGCATA+TGG | 0.467097 | 6_2:-56087856 | Msa0920710:CDS |
GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6_2:-56087437 | Msa0920710:CDS |
GAGGGAATATGATTTGAATA+GGG | 0.475500 | 6_2:-56086228 | Msa0920710:CDS |
TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6_2:+56088317 | None:intergenic |
CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6_2:-56086168 | Msa0920710:CDS |
TTGAGAACACACGTAAGAAT+AGG | 0.491590 | 6_2:+56086116 | None:intergenic |
ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6_2:+56087930 | None:intergenic |
AGGACTCAATCGGGTGGCCA+TGG | 0.512884 | 6_2:+56088327 | None:intergenic |
AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6_2:-56088488 | Msa0920710:CDS |
ACCATAGATTCTGAAGCATA+AGG | 0.518574 | 6_2:+56089588 | None:intergenic |
CGACAAAAGACATCTTTGAC+TGG | 0.519009 | 6_2:-56086485 | Msa0920710:CDS |
TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6_2:+56088250 | None:intergenic |
GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6_2:-56088400 | Msa0920710:CDS |
ATATAGGTGGTGGAAGGAGT+TGG | 0.524102 | 6_2:-56088016 | Msa0920710:intron |
TTCACTTGTGTTGCAAGAGA+AGG | 0.525459 | 6_2:+56088307 | None:intergenic |
GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6_2:-56087519 | Msa0920710:CDS |
TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6_2:+56086622 | None:intergenic |
AACATTGGTCAGAGATGTTG+AGG | 0.533818 | 6_2:-56088443 | Msa0920710:CDS |
TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6_2:+56087916 | None:intergenic |
AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6_2:-56086281 | Msa0920710:intron |
TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6_2:+56088318 | None:intergenic |
AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6_2:-56087918 | Msa0920710:CDS |
CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6_2:-56086617 | Msa0920710:CDS |
ATCGGGTGGCCATGGACTCA+AGG | 0.566605 | 6_2:+56088335 | None:intergenic |
GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6_2:-56086246 | Msa0920710:CDS |
GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6_2:-56088407 | Msa0920710:CDS |
ATAGGTAACGGAACATCAGT+TGG | 0.569838 | 6_2:+56086134 | None:intergenic |
AGGAAACTTCAGTGAAACAT+TGG | 0.576091 | 6_2:-56088458 | Msa0920710:CDS |
ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6_2:+56087976 | None:intergenic |
CACATATCAACAATATCAAG+TGG | 0.594145 | 6_2:-56086555 | Msa0920710:CDS |
GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6_2:-56089624 | Msa0920710:CDS |
AAGAAGTCGTAGCCAAAACT+GGG | 0.599671 | 6_2:+56086529 | None:intergenic |
AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6_2:+56089619 | None:intergenic |
TTGGCTACGACTTCTTACAT+TGG | 0.608393 | 6_2:-56086522 | Msa0920710:CDS |
GATAACTACACACACTCTGA+CGG | 0.610210 | 6_2:-56086056 | Msa0920710:CDS |
AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6_2:-56088478 | Msa0920710:CDS |
GACAAAAGACATCTTTGACT+GGG | 0.626667 | 6_2:-56086484 | Msa0920710:CDS |
ACCATGAACCATCATATGTG+AGG | 0.634158 | 6_2:+56088399 | None:intergenic |
AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6_2:-56086625 | Msa0920710:CDS |
ACATTGGTCAGAGATGTTGA+GGG | 0.666287 | 6_2:-56088442 | Msa0920710:CDS |
GGATGAAATTGTGTCAAGCG+AGG | 0.675331 | 6_2:-56086409 | Msa0920710:intron |
ACACACGTAAGAATAGGTAA+CGG | 0.686084 | 6_2:+56086122 | None:intergenic |
AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6_2:+56088321 | None:intergenic |
GGAACCTGATATGAATACTG+CGG | 0.696636 | 6_2:-56089251 | Msa0920710:CDS |
TAACTATATACCAACAACAG+AGG | 0.703519 | 6_2:-56086586 | Msa0920710:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTATCAGT+AGG | - | chr6_2:56086199-56086218 | Msa0920710:CDS | 10.0% |
!!! | TTTTTACTAAAAAAAATTAC+AGG | + | chr6_2:56086813-56086832 | None:intergenic | 10.0% |
!! | AAATATAATTAAAAGAAATG+AGG | + | chr6_2:56086950-56086969 | None:intergenic | 10.0% |
!! | TGATTATAAAGTAATATTAA+TGG | - | chr6_2:56086998-56087017 | Msa0920710:intron | 10.0% |
!! | ATAAAAACAAAAAATAGTAT+AGG | + | chr6_2:56087652-56087671 | None:intergenic | 10.0% |
!! | AATATAAAATAAACGTTAAT+AGG | + | chr6_2:56089017-56089036 | None:intergenic | 10.0% |
!! | ACAAATTGATAAACTAAAAA+AGG | - | chr6_2:56086461-56086480 | Msa0920710:CDS | 15.0% |
!! | TTGAGTAAAACAAATTATAT+TGG | - | chr6_2:56086672-56086691 | Msa0920710:intron | 15.0% |
!! | TAATATGAATGTCTAAAAAA+TGG | - | chr6_2:56086773-56086792 | Msa0920710:intron | 15.0% |
!!! | ATACTTTTATATTTTGATGT+AGG | + | chr6_2:56087594-56087613 | None:intergenic | 15.0% |
!!! | TTTTTGTTTTTATATATAGG+TGG | - | chr6_2:56087659-56087678 | Msa0920710:intron | 15.0% |
!!! | ATTTCATTTTAAATTGTGTA+TGG | - | chr6_2:56088410-56088429 | Msa0920710:CDS | 15.0% |
!!! | AAACATTTTTACATCATTTT+AGG | - | chr6_2:56088511-56088530 | Msa0920710:intron | 15.0% |
!! | TTGTAGAATTAATATTACAA+AGG | + | chr6_2:56088891-56088910 | None:intergenic | 15.0% |
!! | TTAACAACATTTAATTACAT+AGG | - | chr6_2:56088974-56088993 | Msa0920710:intron | 15.0% |
!!! | TTAATTACATAGGTTTTTTT+TGG | - | chr6_2:56088984-56089003 | Msa0920710:intron | 15.0% |
!! | ATGACATTTAATTGTTGTAA+TGG | + | chr6_2:56086372-56086391 | None:intergenic | 20.0% |
!! | AATTGATAAACTAAAAAAGG+AGG | - | chr6_2:56086464-56086483 | Msa0920710:CDS | 20.0% |
!! | AATATTAATGGTATACATGT+AGG | - | chr6_2:56087010-56087029 | Msa0920710:intron | 20.0% |
!! | CTAATTGTTTAATATTATCG+TGG | - | chr6_2:56087159-56087178 | Msa0920710:intron | 20.0% |
!!! | ATTGTTTTATCTCTAAAGTT+TGG | + | chr6_2:56087947-56087966 | None:intergenic | 20.0% |
!!! | TTCTTTTAACAATAGAGTAA+TGG | - | chr6_2:56088118-56088137 | Msa0920710:intron | 20.0% |
!!! | TTGCAATCAAAATGATTTTT+AGG | - | chr6_2:56088147-56088166 | Msa0920710:CDS | 20.0% |
!!! | AATCAAAATGATTTTTAGGT+GGG | - | chr6_2:56088151-56088170 | Msa0920710:CDS | 20.0% |
!!! | TAATGAAGATACATTTTTCT+TGG | + | chr6_2:56088572-56088591 | None:intergenic | 20.0% |
!! | TGTAAAAAACTTATTATCCA+TGG | - | chr6_2:56088650-56088669 | Msa0920710:intron | 20.0% |
!!! | TATCTTGACATTTTAATTAG+TGG | - | chr6_2:56088917-56088936 | Msa0920710:intron | 20.0% |
!!! | TATAATAAGTTGACATAATG+AGG | - | chr6_2:56089331-56089350 | Msa0920710:intron | 20.0% |
! | AATTCTTTAAATCAACAGCA+AGG | - | chr6_2:56086127-56086146 | Msa0920710:CDS | 25.0% |
! | ATTATGAAAAGTGATTGAAG+AGG | - | chr6_2:56086158-56086177 | Msa0920710:CDS | 25.0% |
!!! | TGTATGTTTTGAATACATAC+AGG | - | chr6_2:56086416-56086435 | Msa0920710:CDS | 25.0% |
!! | ATTGATTCAATATGTCGTTT+GGG | - | chr6_2:56086540-56086559 | Msa0920710:CDS | 25.0% |
!! | GTAATATTTGACTTTGTCAT+GGG | - | chr6_2:56086744-56086763 | Msa0920710:intron | 25.0% |
! | ATGTGAACATTACATAGATA+AGG | + | chr6_2:56086927-56086946 | None:intergenic | 25.0% |
! | TGCAAGTAGAATTTCATTAT+GGG | + | chr6_2:56087490-56087509 | None:intergenic | 25.0% |
! | ATGCAAGTAGAATTTCATTA+TGG | + | chr6_2:56087491-56087510 | None:intergenic | 25.0% |
! | TAATGAAATTCTACTTGCAT+TGG | - | chr6_2:56087491-56087510 | Msa0920710:CDS | 25.0% |
!!! | TTGTTTTTATATATAGGTGG+TGG | - | chr6_2:56087662-56087681 | Msa0920710:intron | 25.0% |
! | GTCATCAATGTATGATAAAA+TGG | + | chr6_2:56087818-56087837 | None:intergenic | 25.0% |
!! | TGAATTAGAACTTTTTACTC+AGG | - | chr6_2:56087864-56087883 | Msa0920710:CDS | 25.0% |
!!! | CAATCAAAATGATTTTTAGG+TGG | - | chr6_2:56088150-56088169 | Msa0920710:CDS | 25.0% |
!!! | ACTCTTACTTCTTTTAAGAA+GGG | + | chr6_2:56088296-56088315 | None:intergenic | 25.0% |
!!! | AACTCTTACTTCTTTTAAGA+AGG | + | chr6_2:56088297-56088316 | None:intergenic | 25.0% |
! | AAATTGTGTATGGTTATCAA+AGG | - | chr6_2:56088420-56088439 | Msa0920710:CDS | 25.0% |
! | AATTGTGTATGGTTATCAAA+GGG | - | chr6_2:56088421-56088440 | Msa0920710:CDS | 25.0% |
!!! | TATCCATGGTTTTATTAACT+CGG | - | chr6_2:56088664-56088683 | Msa0920710:intron | 25.0% |
! | AAGAAAAATGTATCATCATG+AGG | - | chr6_2:56088726-56088745 | Msa0920710:intron | 25.0% |
! | TGCAAAAAACTTATTATCCA+TGG | - | chr6_2:56088805-56088824 | Msa0920710:intron | 25.0% |
CATCAATCCTAATGAGAAAT+CGG | - | chr6_2:56086021-56086040 | Msa0920710:CDS | 30.0% | |
GAAGAGGAATGAAACTTAAA+TGG | - | chr6_2:56086174-56086193 | Msa0920710:CDS | 30.0% | |
GGAATGAAACTTGATATTCT+AGG | - | chr6_2:56086220-56086239 | Msa0920710:CDS | 30.0% | |
!!! | ATCAAGTTGACTTTTTCCAT+GGG | + | chr6_2:56086522-56086541 | None:intergenic | 30.0% |
!!! | AATCAAGTTGACTTTTTCCA+TGG | + | chr6_2:56086523-56086542 | None:intergenic | 30.0% |
! | GATTGATTCAATATGTCGTT+TGG | - | chr6_2:56086539-56086558 | Msa0920710:CDS | 30.0% |
! | AGACGAAATCAATCAAGTTT+TGG | - | chr6_2:56086581-56086600 | Msa0920710:CDS | 30.0% |
! | CGTAATATTTGACTTTGTCA+TGG | - | chr6_2:56086743-56086762 | Msa0920710:intron | 30.0% |
AAAAAATTACAGGCTAACAG+TGG | + | chr6_2:56086803-56086822 | None:intergenic | 30.0% | |
GGTTCATGGTGAAAAAATAT+TGG | - | chr6_2:56087302-56087321 | Msa0920710:intron | 30.0% | |
TGGTGAAAAAATATTGGAAG+AGG | - | chr6_2:56087308-56087327 | Msa0920710:intron | 30.0% | |
! | TTCCAAATTCCTTTTGATGT+AGG | + | chr6_2:56087545-56087564 | None:intergenic | 30.0% |
!!! | TTTTATATATAGGTGGTGGA+AGG | - | chr6_2:56087666-56087685 | Msa0920710:intron | 30.0% |
!!! | AGTAGTAGAATGTTGCTTTT+GGG | - | chr6_2:56087729-56087748 | Msa0920710:intron | 30.0% |
ATATTGGGGCTCAAAATATA+CGG | + | chr6_2:56087761-56087780 | None:intergenic | 30.0% | |
TTTCCTTGCTTGAGAATATT+GGG | + | chr6_2:56087776-56087795 | None:intergenic | 30.0% | |
! | TTTTCCTTGCTTGAGAATAT+TGG | + | chr6_2:56087777-56087796 | None:intergenic | 30.0% |
! | TTTTTACTCAGGCAATTGAA+AGG | - | chr6_2:56087875-56087894 | Msa0920710:CDS | 30.0% |
AATTTACCCATCTTCAATCT+TGG | - | chr6_2:56088030-56088049 | Msa0920710:intron | 30.0% | |
! | GTTGCTTTATAAATCACTCT+TGG | - | chr6_2:56088211-56088230 | Msa0920710:CDS | 30.0% |
!! | CTCTTACTTCTTTTAAGAAG+GGG | + | chr6_2:56088295-56088314 | None:intergenic | 30.0% |
! | AAAGTATCACCATAATGACT+TGG | - | chr6_2:56088546-56088565 | Msa0920710:intron | 30.0% |
TAACTATATACCAACAACAG+AGG | - | chr6_2:56089102-56089121 | Msa0920710:CDS | 30.0% | |
CACATATCAACAATATCAAG+TGG | - | chr6_2:56089133-56089152 | Msa0920710:CDS | 30.0% | |
GTACTTGGAATGTTATATGA+GGG | - | chr6_2:56089442-56089461 | Msa0920710:intron | 30.0% | |
TGAGGGAATATGATTTGAAT+AGG | - | chr6_2:56089459-56089478 | Msa0920710:intron | 30.0% | |
GAGGGAATATGATTTGAATA+GGG | - | chr6_2:56089460-56089479 | Msa0920710:intron | 30.0% | |
! | TTTCTTTTGGCATTCTTGAA+TGG | + | chr6_2:56089492-56089511 | None:intergenic | 30.0% |
!! | AAGCGTTGTCAATTTTCTTT+TGG | + | chr6_2:56089505-56089524 | None:intergenic | 30.0% |
AAAAGAAAATTGACAACGCT+TGG | - | chr6_2:56089504-56089523 | Msa0920710:intron | 30.0% | |
! | TGCAAAACCGATTTCTCATT+AGG | + | chr6_2:56086031-56086050 | None:intergenic | 35.0% |
TCCTTATGCTTCAGAATCTA+TGG | - | chr6_2:56086099-56086118 | Msa0920710:CDS | 35.0% | |
!! | ACCATAGATTCTGAAGCATA+AGG | + | chr6_2:56086103-56086122 | None:intergenic | 35.0% |
AATCCTGGGCTAATATTAAG+TGG | + | chr6_2:56086285-56086304 | None:intergenic | 35.0% | |
ATGAGAGTAACTTGAATCCT+GGG | + | chr6_2:56086299-56086318 | None:intergenic | 35.0% | |
! | TTTTGCTAAATGCAGTCCAT+AGG | - | chr6_2:56086341-56086360 | Msa0920710:intron | 35.0% |
!! | TGTTGTAATGGATCAACCTA+TGG | + | chr6_2:56086360-56086379 | None:intergenic | 35.0% |
!! | AAGAGTGTCTTTCGTTTGAT+CGG | - | chr6_2:56086884-56086903 | Msa0920710:intron | 35.0% |
AGATGTGTTCAACCAATTCA+AGG | - | chr6_2:56087200-56087219 | Msa0920710:intron | 35.0% | |
AGGAAACTTCAGTGAAACAT+TGG | - | chr6_2:56087230-56087249 | Msa0920710:intron | 35.0% | |
! | AAAAATATTGGAAGAGGCGT+TGG | - | chr6_2:56087314-56087333 | Msa0920710:intron | 35.0% |
! | TCTACTTGCATTGGCAAAAT+TGG | - | chr6_2:56087500-56087519 | Msa0920710:CDS | 35.0% |
! | ATTCCTTTTGATGTAGGCTT+TGG | + | chr6_2:56087539-56087558 | None:intergenic | 35.0% |
AGCCTACATCAAAAGGAATT+TGG | - | chr6_2:56087540-56087559 | Msa0920710:intron | 35.0% | |
!!! | GAGTAGTAGAATGTTGCTTT+TGG | - | chr6_2:56087728-56087747 | Msa0920710:intron | 35.0% |
TTCCTTGCTTGAGAATATTG+GGG | + | chr6_2:56087775-56087794 | None:intergenic | 35.0% | |
GATGACACATATGATGCATA+TGG | - | chr6_2:56087832-56087851 | Msa0920710:CDS | 35.0% | |
! | CTAGTCATCAAGTTTAGAGT+TGG | - | chr6_2:56087985-56088004 | Msa0920710:CDS | 35.0% |
TAGCAACCAAGATTGAAGAT+GGG | + | chr6_2:56088039-56088058 | None:intergenic | 35.0% | |
TTAGCAACCAAGATTGAAGA+TGG | + | chr6_2:56088040-56088059 | None:intergenic | 35.0% | |
TAGGTGGGATATTAATTGCT+TGG | - | chr6_2:56088166-56088185 | Msa0920710:CDS | 35.0% | |
TAAAGCAACTTCGTGTAATC+CGG | + | chr6_2:56088200-56088219 | None:intergenic | 35.0% | |
GAGCAAGAAATGAAGAAAGA+AGG | - | chr6_2:56088251-56088270 | Msa0920710:CDS | 35.0% | |
!! | TTCTTTTAAGAAGGGGTCAA+GGG | + | chr6_2:56088288-56088307 | None:intergenic | 35.0% |
TGGTTATCAAAGGGAAGTTT+AGG | - | chr6_2:56088430-56088449 | Msa0920710:CDS | 35.0% | |
! | TTTTCTTGGCCAAGTCATTA+TGG | + | chr6_2:56088558-56088577 | None:intergenic | 35.0% |
GAACCGAGTTAATAAAACCA+TGG | + | chr6_2:56088670-56088689 | None:intergenic | 35.0% | |
GAACTGAGTTCATATAACCA+TGG | + | chr6_2:56088825-56088844 | None:intergenic | 35.0% | |
AATCCAAGCTTATATGAGTG+AGG | - | chr6_2:56089063-56089082 | Msa0920710:CDS | 35.0% | |
TACGACTTCTTACATTGGAA+TGG | - | chr6_2:56089171-56089190 | Msa0920710:CDS | 35.0% | |
ACGACTTCTTACATTGGAAT+GGG | - | chr6_2:56089172-56089191 | Msa0920710:CDS | 35.0% | |
GACAAAAGACATCTTTGACT+GGG | - | chr6_2:56089204-56089223 | Msa0920710:CDS | 35.0% | |
! | GCAGCAGCATTAACAATTTT+TGG | + | chr6_2:56089241-56089260 | None:intergenic | 35.0% |
AAACAGTTTGAGCAGAAAAG+AGG | - | chr6_2:56089407-56089426 | Msa0920710:intron | 35.0% | |
CGTACTTGGAATGTTATATG+AGG | - | chr6_2:56089441-56089460 | Msa0920710:intron | 35.0% | |
CGCTTGGAAAGATATAAATC+AGG | - | chr6_2:56089520-56089539 | Msa0920710:intron | 35.0% | |
ACACACGTAAGAATAGGTAA+CGG | + | chr6_2:56089569-56089588 | None:intergenic | 35.0% | |
TTGAGAACACACGTAAGAAT+AGG | + | chr6_2:56089575-56089594 | None:intergenic | 35.0% | |
AAAAATCTCCCCAAACGCTA+GGG | + | chr6_2:56086075-56086094 | None:intergenic | 40.0% | |
AAAAAATCTCCCCAAACGCT+AGG | + | chr6_2:56086076-56086095 | None:intergenic | 40.0% | |
CTGGGCTAATATTAAGTGGT+TGG | + | chr6_2:56086281-56086300 | None:intergenic | 40.0% | |
CAACCACTTAATATTAGCCC+AGG | - | chr6_2:56086279-56086298 | Msa0920710:intron | 40.0% | |
CATGAGAGTAACTTGAATCC+TGG | + | chr6_2:56086300-56086319 | None:intergenic | 40.0% | |
GGAACCTGATATGAATACTG+CGG | - | chr6_2:56086437-56086456 | Msa0920710:CDS | 40.0% | |
CTCAAAAACAGAGAAACCCA+TGG | - | chr6_2:56086503-56086522 | Msa0920710:CDS | 40.0% | |
!! | GTGTTTCTGAAGTGCGAAAA+AGG | + | chr6_2:56087053-56087072 | None:intergenic | 40.0% |
AACATTGGTCAGAGATGTTG+AGG | - | chr6_2:56087245-56087264 | Msa0920710:intron | 40.0% | |
ACATTGGTCAGAGATGTTGA+GGG | - | chr6_2:56087246-56087265 | Msa0920710:intron | 40.0% | |
GTATGAAGCCTCACATATGA+TGG | - | chr6_2:56087281-56087300 | Msa0920710:intron | 40.0% | |
ACCATGAACCATCATATGTG+AGG | + | chr6_2:56087292-56087311 | None:intergenic | 40.0% | |
TTGCAAGAGAAGGACTCAAT+CGG | + | chr6_2:56087374-56087393 | None:intergenic | 40.0% | |
TTCACTTGTGTTGCAAGAGA+AGG | + | chr6_2:56087384-56087403 | None:intergenic | 40.0% | |
GGATGAATCTTGCTCATAGA+TGG | + | chr6_2:56087469-56087488 | None:intergenic | 40.0% | |
ACTACTCTATCTCGTGCATA+CGG | + | chr6_2:56087715-56087734 | None:intergenic | 40.0% | |
GTGGGATATTAATTGCTTGG+AGG | - | chr6_2:56088169-56088188 | Msa0920710:CDS | 40.0% | |
TAATTGCTTGGAGGATCTTC+CGG | - | chr6_2:56088178-56088197 | Msa0920710:CDS | 40.0% | |
!! | CTTCTTTTAAGAAGGGGTCA+AGG | + | chr6_2:56088289-56088308 | None:intergenic | 40.0% |
ATAGTTAGCATTCAGCCATC+TGG | + | chr6_2:56089089-56089108 | None:intergenic | 40.0% | |
! | ATCAAGTGGTTACCCAGTTT+TGG | - | chr6_2:56089147-56089166 | Msa0920710:CDS | 40.0% |
AAGAAGTCGTAGCCAAAACT+GGG | + | chr6_2:56089162-56089181 | None:intergenic | 40.0% | |
TAAGAAGTCGTAGCCAAAAC+TGG | + | chr6_2:56089163-56089182 | None:intergenic | 40.0% | |
TTGGCTACGACTTCTTACAT+TGG | - | chr6_2:56089166-56089185 | Msa0920710:CDS | 40.0% | |
CGACAAAAGACATCTTTGAC+TGG | - | chr6_2:56089203-56089222 | Msa0920710:CDS | 40.0% | |
TGCTATACATTGCAGGCTTA+GGG | - | chr6_2:56089258-56089277 | Msa0920710:intron | 40.0% | |
AGGACATGTTTCTTCGTACT+TGG | - | chr6_2:56089427-56089446 | Msa0920710:intron | 40.0% | |
!! | ATAGGTAACGGAACATCAGT+TGG | + | chr6_2:56089557-56089576 | None:intergenic | 40.0% |
!! | CAATCTCTCGCGTTTTATTG+AGG | - | chr6_2:56089592-56089611 | Msa0920710:CDS | 40.0% |
GATAACTACACACACTCTGA+CGG | - | chr6_2:56089632-56089651 | Msa0920710:CDS | 40.0% | |
AGATTTCCACCCTAGCGTTT+GGG | - | chr6_2:56086063-56086082 | Msa0920710:CDS | 45.0% | |
TGTGCCGCAGTATTCATATC+AGG | + | chr6_2:56086444-56086463 | None:intergenic | 45.0% | |
AACCAATTCAAGGACGAGCA+AGG | - | chr6_2:56087210-56087229 | Msa0920710:intron | 45.0% | |
TTCCTTGCTCGTCCTTGAAT+TGG | + | chr6_2:56087215-56087234 | None:intergenic | 45.0% | |
GCCTCACATATGATGGTTCA+TGG | - | chr6_2:56087288-56087307 | Msa0920710:intron | 45.0% | |
TGCAAGAGAAGGACTCAATC+GGG | + | chr6_2:56087373-56087392 | None:intergenic | 45.0% | |
CAAAAACTTGCCTAGGCTAG+TGG | - | chr6_2:56087428-56087447 | Msa0920710:CDS | 45.0% | |
! | TAACTTCTTGCCACTAGCCT+AGG | + | chr6_2:56087441-56087460 | None:intergenic | 45.0% |
GCTCCAAAGCCTACATCAAA+AGG | - | chr6_2:56087533-56087552 | Msa0920710:intron | 45.0% | |
!! | ATATAGGTGGTGGAAGGAGT+TGG | - | chr6_2:56087672-56087691 | Msa0920710:intron | 45.0% |
AGCCCCAATATTCTCAAGCA+AGG | - | chr6_2:56087770-56087789 | Msa0920710:intron | 45.0% | |
TGGCCTCACTCATATAAGCT+TGG | + | chr6_2:56089069-56089088 | None:intergenic | 45.0% | |
CTTATATGAGTGAGGCCAGA+TGG | - | chr6_2:56089071-56089090 | Msa0920710:CDS | 45.0% | |
TGCATGTACTCCTCTGTTGT+TGG | + | chr6_2:56089115-56089134 | None:intergenic | 45.0% | |
ATGCTGCTGCTATACATTGC+AGG | - | chr6_2:56089251-56089270 | Msa0920710:CDS | 45.0% | |
CTGCTATACATTGCAGGCTT+AGG | - | chr6_2:56089257-56089276 | Msa0920710:intron | 45.0% | |
GGATGAAATTGTGTCAAGCG+AGG | - | chr6_2:56089279-56089298 | Msa0920710:intron | 45.0% | |
!!! | TTTTTTTTTTGTTTTTAATT+TGG | - | chr6_2:56086641-56086660 | Msa0920710:intron | 5.0% |
!!! | TATTTTTTGTTTTTATATAT+AGG | - | chr6_2:56087656-56087675 | Msa0920710:intron | 5.0% |
CAGATTTCCACCCTAGCGTT+TGG | - | chr6_2:56086062-56086081 | Msa0920710:CDS | 50.0% | |
GATTTCCACCCTAGCGTTTG+GGG | - | chr6_2:56086064-56086083 | Msa0920710:CDS | 50.0% | |
!!! | GAGGCGTTGGCTTTTACTTC+TGG | - | chr6_2:56087327-56087346 | Msa0920710:intron | 50.0% |
TTCTGGTCACCTTGAGTCCA+TGG | - | chr6_2:56087344-56087363 | Msa0920710:intron | 50.0% | |
AAGAGAAGGACTCAATCGGG+TGG | + | chr6_2:56087370-56087389 | None:intergenic | 50.0% | |
CTCTGCGCAAAAACTTGCCT+AGG | - | chr6_2:56087421-56087440 | Msa0920710:CDS | 50.0% | |
AATCTCCCCAAACGCTAGGG+TGG | + | chr6_2:56086072-56086091 | None:intergenic | 55.0% | |
ATCGGGTGGCCATGGACTCA+AGG | + | chr6_2:56087356-56087375 | None:intergenic | 60.0% | |
AGGACTCAATCGGGTGGCCA+TGG | + | chr6_2:56087364-56087383 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 56086004 | 56089706 | 56086004 | ID=Msa0920710;Name=Msa0920710 |
chr6_2 | mRNA | 56086004 | 56089706 | 56086004 | ID=Msa0920710-mRNA-1;Parent=Msa0920710;Name=Msa0920710-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0.83|0.71|7|0|548 |
chr6_2 | exon | 56089590 | 56089706 | 56089590 | ID=Msa0920710-mRNA-1:exon:8379;Parent=Msa0920710-mRNA-1 |
chr6_2 | exon | 56089017 | 56089272 | 56089017 | ID=Msa0920710-mRNA-1:exon:8378;Parent=Msa0920710-mRNA-1 |
chr6_2 | exon | 56088136 | 56088508 | 56088136 | ID=Msa0920710-mRNA-1:exon:8377;Parent=Msa0920710-mRNA-1 |
chr6_2 | exon | 56087814 | 56088032 | 56087814 | ID=Msa0920710-mRNA-1:exon:8376;Parent=Msa0920710-mRNA-1 |
chr6_2 | exon | 56087403 | 56087541 | 56087403 | ID=Msa0920710-mRNA-1:exon:8375;Parent=Msa0920710-mRNA-1 |
chr6_2 | exon | 56086410 | 56086658 | 56086410 | ID=Msa0920710-mRNA-1:exon:8374;Parent=Msa0920710-mRNA-1 |
chr6_2 | exon | 56086004 | 56086297 | 56086004 | ID=Msa0920710-mRNA-1:exon:8373;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56089590 | 56089706 | 56089590 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56089017 | 56089272 | 56089017 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56088136 | 56088508 | 56088136 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56087814 | 56088032 | 56087814 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56087403 | 56087541 | 56087403 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56086410 | 56086658 | 56086410 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
chr6_2 | CDS | 56086004 | 56086297 | 56086004 | ID=Msa0920710-mRNA-1:cds;Parent=Msa0920710-mRNA-1 |
Gene Sequence |
Protein sequence |