AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0959210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959210 MtrunA17_Chr7g0236991 68.885 556 170 1 1 556 1 553 0.0 819
Msa0959210 MtrunA17_Chr7g0237001 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959210 MtrunA17_Chr7g0237041 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959210 MtrunA17_Chr7g0237081 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959210 MtrunA17_Chr7g0237051 68.705 556 171 1 1 556 1 553 0.0 818
Msa0959210 MtrunA17_Chr6g0466051 69.245 556 168 1 1 556 1 553 0.0 815
Msa0959210 MtrunA17_Chr6g0465911 69.065 556 169 1 1 556 1 553 0.0 813
Msa0959210 MtrunA17_Chr5g0425371 68.165 556 174 1 1 556 1 553 0.0 803
Msa0959210 MtrunA17_Chr6g0465441 67.446 556 178 1 1 556 1 553 0.0 795
Msa0959210 MtrunA17_Chr6g0451711 65.889 557 189 1 1 556 1 557 0.0 787
Msa0959210 MtrunA17_Chr3g0105071 66.068 557 188 1 1 556 1 557 0.0 781
Msa0959210 MtrunA17_Chr4g0024691 66.302 549 185 0 8 556 13 561 0.0 771
Msa0959210 MtrunA17_Chr6g0465851 70.270 518 154 0 39 556 1 518 0.0 770
Msa0959210 MtrunA17_Chr3g0082691 65.751 546 186 1 12 556 8 553 0.0 766
Msa0959210 MtrunA17_Chr7g0236961 69.880 498 150 0 59 556 1 498 0.0 752
Msa0959210 MtrunA17_Chr7g0237011 69.880 498 150 0 59 556 1 498 0.0 751
Msa0959210 MtrunA17_Chr5g0431571 66.360 544 182 1 12 554 4 547 0.0 749
Msa0959210 MtrunA17_Chr5g0431651 64.835 546 190 2 13 556 7 552 0.0 742
Msa0959210 MtrunA17_Chr4g0042111 57.092 557 236 2 2 556 7 562 0.0 669
Msa0959210 MtrunA17_Chr7g0236971 68.828 401 125 0 156 556 1 401 0.0 600
Msa0959210 MtrunA17_Chr6g0465981 71.277 376 105 1 1 376 1 373 0.0 563
Msa0959210 MtrunA17_Chr6g0465871 71.277 376 105 1 1 376 1 373 0.0 563
Msa0959210 MtrunA17_Chr6g0466081 71.277 376 105 1 1 376 1 373 0.0 563
Msa0959210 MtrunA17_Chr6g0466111 73.373 338 90 0 39 376 1 338 0.0 519
Msa0959210 MtrunA17_Chr6g0465931 73.077 338 91 0 39 376 1 338 0.0 516
Msa0959210 MtrunA17_Chr2g0319041 45.255 548 292 8 15 556 12 557 5.92e-173 501
Msa0959210 MtrunA17_Chr7g0236951 72.204 313 87 0 59 371 1 313 8.44e-171 486
Msa0959210 MtrunA17_Chr7g0237031 72.204 313 87 0 59 371 1 313 3.34e-170 484
Msa0959210 MtrunA17_Chr8g0336181 44.909 550 295 6 13 556 9 556 4.34e-170 493
Msa0959210 MtrunA17_Chr2g0319051 44.444 513 279 6 48 556 4 514 4.80e-162 471
Msa0959210 MtrunA17_Chr4g0008621 45.000 400 216 4 15 410 19 418 9.08e-122 365
Msa0959210 MtrunA17_Chr6g0466031 64.615 260 92 0 297 556 1 260 8.22e-121 356
Msa0959210 MtrunA17_Chr4g0023911 34.799 546 345 4 13 554 41 579 5.02e-115 353
Msa0959210 MtrunA17_Chr5g0445511 65.966 238 81 0 152 389 2 239 4.18e-113 336
Msa0959210 MtrunA17_Chr2g0319071 36.434 516 276 11 43 554 20 487 2.01e-111 341
Msa0959210 MtrunA17_Chr7g0237061 60.385 260 80 2 297 556 1 237 1.11e-106 319
Msa0959210 MtrunA17_Chr2g0310331 36.414 541 332 8 17 554 53 584 8.98e-105 327
Msa0959210 MtrunA17_Chr2g0323151 35.456 471 289 4 68 534 1 460 5.21e-101 313
Msa0959210 MtrunA17_Chr2g0323131 34.420 491 305 6 49 534 67 545 1.13e-100 315
Msa0959210 MtrunA17_Chr6g0466021 70.098 204 58 1 1 204 1 201 2.32e-99 299
Msa0959210 MtrunA17_Chr7g0237071 70.792 202 59 0 59 260 1 202 1.89e-98 298
Msa0959210 MtrunA17_Chr8g0357411 32.364 550 363 5 7 554 45 587 8.25e-95 301
Msa0959210 MtrunA17_Chr4g0048921 32.621 515 334 6 44 554 64 569 1.16e-88 284
Msa0959210 MtrunA17_Chr7g0237021 68.023 172 55 0 385 556 1 172 7.95e-85 261
Msa0959210 MtrunA17_Chr7g0236941 68.023 172 55 0 385 556 1 172 7.95e-85 261
Msa0959210 MtrunA17_Chr4g0048911 31.076 502 332 7 55 548 61 556 1.65e-81 265
Msa0959210 MtrunA17_Chr6g0465941 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959210 MtrunA17_Chr6g0466121 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959210 MtrunA17_Chr6g0465991 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959210 MtrunA17_Chr6g0466091 64.535 172 61 0 385 556 1 172 3.41e-78 243
Msa0959210 MtrunA17_Chr6g0465881 63.953 172 62 0 385 556 1 172 1.65e-77 242
Msa0959210 MtrunA17_Chr2g0319081 39.755 327 175 8 233 556 120 427 1.65e-75 246
Msa0959210 MtrunA17_Chr2g0319081 31.651 218 139 4 15 224 19 234 3.10e-22 99.4
Msa0959210 MtrunA17_Chr5g0445501 61.628 172 66 0 385 556 1 172 1.71e-74 234
Msa0959210 MtrunA17_Chr2g0280581 29.151 518 342 8 47 547 9 518 9.44e-73 241
Msa0959210 MtrunA17_Chr2g0310401 32.710 428 283 4 130 554 5 430 1.42e-70 233
Msa0959210 MtrunA17_Chr3g0108941 29.307 505 345 9 54 550 13 513 1.86e-69 232
Msa0959210 MtrunA17_Chr7g0236921 63.291 158 54 1 403 556 1 158 2.07e-69 220
Msa0959210 MtrunA17_Chr3g0105691 29.979 487 334 6 54 534 46 531 2.70e-68 230
Msa0959210 MtrunA17_Chr3g0109031 29.592 490 332 8 54 534 13 498 4.85e-68 228
Msa0959210 MtrunA17_Chr3g0109001 29.835 486 327 8 54 529 13 494 1.30e-67 227
Msa0959210 MtrunA17_Chr3g0109021 29.897 485 327 8 54 529 13 493 1.65e-67 227
Msa0959210 MtrunA17_Chr6g0477111 29.314 481 328 7 68 539 1 478 3.17e-66 223
Msa0959210 MtrunA17_Chr3g0099031 29.365 504 345 9 54 550 13 512 1.51e-65 222
Msa0959210 MtrunA17_Chr3g0108981 29.299 471 322 5 68 529 1 469 1.67e-65 221
Msa0959210 MtrunA17_Chr3g0108961 29.299 471 322 5 68 529 1 469 1.67e-65 221
Msa0959210 MtrunA17_Chr3g0108991 29.098 488 337 8 54 534 13 498 3.29e-65 221
Msa0959210 MtrunA17_Chr3g0108951 29.098 488 337 8 54 534 13 498 3.29e-65 221
Msa0959210 MtrunA17_Chr7g0236931 60.390 154 58 1 403 556 1 151 6.96e-64 206
Msa0959210 MtrunA17_Chr3g0108971 28.692 474 330 7 68 534 1 473 1.15e-63 216
Msa0959210 MtrunA17_Chr3g0109011 28.571 476 328 7 68 534 1 473 2.21e-63 215
Msa0959210 MtrunA17_Chr7g0236981 65.926 135 43 1 1 135 1 132 1.97e-57 188
Msa0959210 MtrunA17_Chr6g0477121 28.889 405 277 6 133 529 10 411 1.08e-55 193
Msa0959210 MtrunA17_Chr7g0233861 63.704 135 40 1 196 330 33 158 2.69e-52 176
Msa0959210 MtrunA17_Chr7g0217361 32.558 301 202 1 255 554 8 308 3.91e-48 169
Msa0959210 MtrunA17_Chr8g0357221 35.341 249 154 4 10 257 48 290 1.38e-39 145
Msa0959210 MtrunA17_Chr5g0445521 64.286 98 35 0 1 98 1 98 4.19e-39 138
Msa0959210 MtrunA17_Chr3g0101681 25.769 520 336 15 70 554 276 780 1.59e-37 148
Msa0959210 MtrunA17_Chr2g0310121 24.521 522 340 16 70 554 275 779 9.79e-36 142
Msa0959210 MtrunA17_Chr5g0445401 70.526 95 24 2 166 257 1 94 1.79e-34 125
Msa0959210 MtrunA17_Chr8g0357231 29.457 258 180 2 298 554 1 257 5.44e-34 129
Msa0959210 MtrunA17_Chr3g0082711 48.276 116 43 1 441 556 1 99 6.31e-32 118
Msa0959210 MtrunA17_Chr7g0259881 27.273 275 168 6 68 313 227 498 1.98e-24 107
Msa0959210 MtrunA17_Chr7g0218001 29.927 274 160 6 68 310 344 616 3.77e-24 107
Msa0959210 MtrunA17_Chr7g0217351 29.167 216 146 4 46 258 62 273 2.23e-21 94.7
Msa0959210 MtrunA17_Chr2g0281651 23.476 328 237 9 233 554 43 362 1.44e-19 91.3
Msa0959210 MtrunA17_Chr7g0218041 30.802 237 139 6 120 332 3 238 3.96e-15 77.8
Msa0959210 MtrunA17_Chr2g0310411 31.967 122 75 3 10 131 51 164 1.95e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0959210 AT5G23960.2 39.564 551 318 7 13 556 3 545 3.95e-144 427
Msa0959210 AT5G23960.1 39.531 554 316 9 13 556 3 547 5.66e-143 424
Msa0959210 AT1G70080.1 37.163 557 340 7 8 556 57 611 2.69e-131 396
Msa0959210 AT3G14490.1 37.546 546 331 5 17 556 60 601 1.82e-126 384
Msa0959210 AT3G14520.1 36.599 541 333 5 22 556 68 604 2.07e-126 384
Msa0959210 AT1G31950.3 36.314 548 326 6 22 556 70 607 2.38e-125 381
Msa0959210 AT1G31950.1 36.599 541 333 5 22 556 70 606 1.10e-124 379
Msa0959210 AT3G14540.1 36.852 540 333 4 22 556 65 601 6.13e-124 377
Msa0959210 AT3G29410.1 35.424 542 346 3 17 556 64 603 5.06e-118 362
Msa0959210 AT3G32030.1 34.444 540 346 6 22 556 68 604 2.33e-116 357
Msa0959210 AT5G44630.1 35.963 545 338 8 18 554 14 555 1.07e-115 354
Msa0959210 AT4G20210.1 34.672 548 345 7 17 556 58 600 1.11e-115 355
Msa0959210 AT4G13300.1 35.250 539 338 7 25 556 20 554 1.21e-113 349
Msa0959210 AT1G33750.1 34.019 535 347 4 24 556 73 603 2.60e-113 350
Msa0959210 AT4G20200.1 35.521 518 320 8 48 556 92 604 1.82e-112 347
Msa0959210 AT3G29410.2 35.800 500 317 3 59 556 1 498 2.00e-112 344
Msa0959210 AT4G15870.1 35.305 541 324 10 25 556 75 598 1.95e-108 337
Msa0959210 AT4G13280.2 34.637 537 340 7 27 556 22 554 3.53e-108 335
Msa0959210 AT1G31950.2 36.933 463 269 6 22 471 70 522 5.72e-106 328
Msa0959210 AT3G14540.2 37.892 446 270 3 22 463 65 507 1.51e-105 327
Msa0959210 AT3G29190.1 33.141 519 331 7 48 556 89 601 3.11e-105 328
Msa0959210 AT4G20230.1 33.147 537 345 8 25 552 70 601 1.46e-102 322
Msa0959210 AT4G20230.2 33.147 537 345 8 25 552 82 613 2.00e-102 322
Msa0959210 AT3G29110.1 34.559 544 347 8 17 554 55 595 2.07e-102 321
Msa0959210 AT2G23230.2 34.249 546 344 9 16 551 55 595 2.38e-102 322
Msa0959210 AT2G23230.1 34.066 546 340 10 16 551 55 590 5.21e-100 315
Msa0959210 AT1G66020.1 32.418 546 360 6 17 556 56 598 1.29e-98 311
Msa0959210 AT1G48800.1 32.418 546 353 9 17 552 63 602 9.13e-97 306
Msa0959210 AT4G13280.1 33.706 537 315 9 27 556 22 524 2.37e-96 303
Msa0959210 AT4G16730.1 32.197 528 336 9 42 554 17 537 1.02e-94 299
Msa0959210 AT4G16730.2 32.265 499 317 8 73 556 1 493 3.80e-91 289
Msa0959210 AT4G16740.1 31.655 556 353 13 14 556 23 564 1.02e-88 285
Msa0959210 AT1G61680.1 32.265 499 326 4 54 546 77 569 4.30e-88 283
Msa0959210 AT2G24210.1 31.250 560 364 11 10 556 39 590 2.81e-87 281
Msa0959210 AT1G61680.2 31.864 499 321 5 54 546 77 562 1.00e-84 274
Msa0959210 AT1G48820.1 31.169 539 321 11 17 549 63 557 2.51e-84 273
Msa0959210 AT5G48110.1 37.609 343 209 5 215 556 1 339 2.75e-84 266
Msa0959210 AT3G25820.1 29.730 555 372 12 15 556 45 594 8.60e-80 262
Msa0959210 AT3G25830.1 29.730 555 372 12 15 556 45 594 8.60e-80 262
Msa0959210 AT3G25810.1 30.427 562 362 12 15 556 45 597 4.65e-79 260
Msa0959210 AT4G16740.2 34.301 379 228 8 14 381 23 391 4.29e-69 228
Msa0959210 AT1G66020.2 34.417 369 233 6 17 379 56 421 1.21e-67 225
Msa0959210 AT3G25820.2 31.414 382 251 8 15 389 45 422 3.66e-61 209
Msa0959210 AT4G16740.4 34.451 328 195 7 14 330 23 341 1.38e-58 199
Msa0959210 AT4G16740.3 34.451 328 195 7 14 330 23 341 1.38e-58 199
Msa0959210 AT3G25820.4 31.988 322 210 6 15 330 45 363 1.65e-53 187
Msa0959210 AT3G25820.3 31.988 322 210 6 15 330 45 363 1.65e-53 187
Msa0959210 AT1G79460.1 24.525 526 338 20 70 556 274 779 1.72e-31 130
Msa0959210 AT1G61120.1 23.715 506 356 10 71 556 289 784 8.72e-28 119
Msa0959210 AT4G02780.1 28.846 260 157 5 68 300 329 587 8.48e-23 103

Find 94 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTGCTGTGCTATTT+AGG 0.103456 6_3:-75627111 Msa0959210:CDS
TCTACTTGCATTGGCAAAAT+TGG 0.119753 6_3:-75626137 Msa0959210:CDS
AATAAATACTCAAATTTCTA+TGG 0.184094 6_3:+75623945 None:intergenic
TTCTCTTGCTGTGCTATTTA+GGG 0.189824 6_3:-75627110 Msa0959210:CDS
TCCTTATGCTTCAGATTCTA+TGG 0.234780 6_3:-75627723 Msa0959210:intron
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6_3:+75625864 None:intergenic
ATGCAAGTAGAATTTCATTA+TGG 0.248221 6_3:+75626149 None:intergenic
AGCCTACATCAAAAGGAATT+TGG 0.257080 6_3:-75626097 Msa0959210:CDS
TACAAGAGTTATGTTCAAAA+TGG 0.269625 6_3:-75627160 Msa0959210:CDS
CTGCTATACATTGCAGGCTT+AGG 0.276774 6_3:-75624381 Msa0959210:CDS
AGACGAAATTAATCAAGTTT+TGG 0.301364 6_3:-75627191 Msa0959210:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6_3:+75625822 None:intergenic
TGCAAAACCGATTTCTCATT+AGG 0.335406 6_3:+75627794 None:intergenic
TAATTGCTTGGAGGATCTTC+CGG 0.335446 6_3:-75625459 Msa0959210:CDS
TGAGGGAATATGATTTGAAT+AGG 0.340079 6_3:-75624179 Msa0959210:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6_3:+75626425 None:intergenic
GAGTAGTAGAATGTTGCTTT+TGG 0.347068 6_3:-75625909 Msa0959210:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6_3:-75624387 Msa0959210:CDS
TGTGCCGCAGTATTCATATC+AGG 0.354426 6_3:+75627331 None:intergenic
CATCAATCCTAATGAGAAAT+CGG 0.381109 6_3:-75627801 Msa0959210:CDS
TGCAAGTAGAATTTCATTAT+GGG 0.387262 6_3:+75626150 None:intergenic
CGTACTTAGAATGTTATATG+AGG 0.388941 6_3:-75624197 Msa0959210:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6_3:+75626171 None:intergenic
GATTGACTCGATATGTCGTT+TGG 0.393872 6_3:-75627233 Msa0959210:CDS
TAAAGCAACTTCGTGTAATC+CGG 0.404734 6_3:+75625440 None:intergenic
GTTGCTTTATAAATCACTCT+TGG 0.404999 6_3:-75625426 Msa0959210:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6_3:+75624526 None:intergenic
AAAAGAAAATTGACAACGCT+TGG 0.444020 6_3:-75624134 Msa0959210:CDS
TTCTGGTCACCTTGAGTCCA+TGG 0.446304 6_3:-75626293 Msa0959210:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6_3:-75624380 Msa0959210:CDS
GCTCCAAAGCCTACATCAAA+AGG 0.450495 6_3:-75626104 Msa0959210:CDS
TAGGTGGGATATTAATTGCT+TGG 0.452782 6_3:-75625471 Msa0959210:CDS
TACGACTTCTTACATTGGAA+TGG 0.454510 6_3:-75624467 Msa0959210:CDS
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6_3:+75624552 None:intergenic
CAGATTTCCACCCTAGCGTA+TGG 0.460138 6_3:-75627760 Msa0959210:CDS
TAATGAAATTCTACTTGCAT+TGG 0.460272 6_3:-75626146 Msa0959210:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6_3:-75624466 Msa0959210:CDS
GATGACACATATGATGCATA+TGG 0.467097 6_3:-75625805 Msa0959210:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6_3:-75625386 Msa0959210:CDS
AAACAGTTTGAGCAGAAAAG+AGG 0.472567 6_3:-75624231 Msa0959210:intron
GAGGGAATATGATTTGAATA+GGG 0.475500 6_3:-75624178 Msa0959210:CDS
ATAAATACTCAAATTTCTAT+GGG 0.482609 6_3:+75623946 None:intergenic
TTGCAAGAGAAGGACTCAAT+CGG 0.484754 6_3:+75626266 None:intergenic
ATTGACTCGATATGTCGTTT+GGG 0.487347 6_3:-75627232 Msa0959210:CDS
CGCTTGGAAAGATATAAATC+AGG 0.490061 6_3:-75624118 Msa0959210:CDS
TTGAGAACACACGTAAGAAT+AGG 0.491590 6_3:+75624066 None:intergenic
ATATTGGGGCTCAAAATATA+CGG 0.495144 6_3:+75625879 None:intergenic
CTGTGCTATTTAGGGTGTTG+AGG 0.502767 6_3:-75627102 Msa0959210:CDS
ACCATAGAATCTGAAGCATA+AGG 0.512185 6_3:+75627722 None:intergenic
CATGGACTTTACGTTTCACC+TGG 0.512238 6_3:-75627076 Msa0959210:intron
AGGACTCAATCGGGTGGCCA+TGG 0.512884 6_3:+75626276 None:intergenic
AGATGTGTTCAACCAATTCA+AGG 0.513117 6_3:-75626437 Msa0959210:CDS
CGACAAAAGACATCTTTGAC+TGG 0.519009 6_3:-75624435 Msa0959210:CDS
TAACTTCTTGCCACTAGCCT+AGG 0.521919 6_3:+75626199 None:intergenic
GCCTCACATATGATGGTTCA+TGG 0.522278 6_3:-75626349 Msa0959210:CDS
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6_3:+75624478 None:intergenic
ATATAGGTGGTGGAAGGAGT+TGG 0.524102 6_3:-75625965 Msa0959210:intron
TGAATTAGAACTCTTTACTC+AGG 0.528343 6_3:-75625773 Msa0959210:CDS
GTGGGATATTAATTGCTTGG+AGG 0.529634 6_3:-75625468 Msa0959210:CDS
TGGCCTCACTCATATAAGCT+TGG 0.531321 6_3:+75624572 None:intergenic
AACAATGGTCAGAGATGTTG+AGG 0.533818 6_3:-75626392 Msa0959210:CDS
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6_3:+75625865 None:intergenic
AGATTTCCACCCTAGCGTAT+GGG 0.542999 6_3:-75627759 Msa0959210:CDS
TGCAAGAGAAGGACTCAATC+GGG 0.546913 6_3:+75626267 None:intergenic
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6_3:-75625867 Msa0959210:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6_3:-75624567 Msa0959210:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.552007 6_3:-75627094 Msa0959210:CDS
TTTACTTGTGTTGCAAGAGA+AGG 0.558925 6_3:+75626256 None:intergenic
ATCGGGTGGCCATGGACTCA+AGG 0.566605 6_3:+75626284 None:intergenic
GTATGAAGCCTCACATATGA+TGG 0.567934 6_3:-75626356 Msa0959210:CDS
ATAGGTAACGGAACATCAGT+TGG 0.569838 6_3:+75624084 None:intergenic
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6_3:-75624491 Msa0959210:CDS
ATAGCACAGCAAGAGAATGA+AGG 0.572946 6_3:+75627116 None:intergenic
GTACTTAGAATGTTATATGA+GGG 0.573263 6_3:-75624196 Msa0959210:CDS
GATTTCCACCCTAGCGTATG+GGG 0.586157 6_3:-75627758 Msa0959210:CDS
TTGGCTACGACTTCTTACAT+TGG 0.586299 6_3:-75624472 Msa0959210:CDS
TCTTTACTCAGGCAATTGAA+AGG 0.586966 6_3:-75625762 Msa0959210:intron
CTTTATATATAGGTGGTGGA+AGG 0.588928 6_3:-75625971 Msa0959210:intron
ACTACTCTATCTCGTGCATA+CGG 0.590301 6_3:+75625925 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6_3:-75624505 Msa0959210:CDS
AATCTCCCCATACGCTAGGG+TGG 0.601357 6_3:+75627753 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6_3:-75624006 Msa0959210:CDS
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6_3:+75624479 None:intergenic
AACCAATTCAAGGACGAGCA+AGG 0.615624 6_3:-75626427 Msa0959210:CDS
AGGAAACTTCAGTGAAACAA+TGG 0.623863 6_3:-75626407 Msa0959210:CDS
GACAAAAGACATCTTTGACT+GGG 0.626667 6_3:-75624434 Msa0959210:CDS
ACCATGAACCATCATATGTG+AGG 0.634158 6_3:+75626348 None:intergenic
AATCCAAGCTTATATGAGTG+AGG 0.644710 6_3:-75624575 Msa0959210:CDS
ACAATGGTCAGAGATGTTGA+GGG 0.666287 6_3:-75626391 Msa0959210:CDS
GGATGAAATTGTGTCAAGCG+AGG 0.675331 6_3:-75624359 Msa0959210:intron
ACACACGTAAGAATAGGTAA+CGG 0.686084 6_3:+75624072 None:intergenic
AAGAGAAGGACTCAATCGGG+TGG 0.695745 6_3:+75626270 None:intergenic
GGAACCTGATATGAATACTG+CGG 0.696636 6_3:-75627335 Msa0959210:CDS
TAACTATATACCAACAACAG+AGG 0.703519 6_3:-75624536 Msa0959210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACTAATAAAAATTAC+AGG + chr6_3:75624925-75624944 None:intergenic 10.0%
!! TGATTATAAAGTAATATTAA+TGG - chr6_3:75625124-75625143 Msa0959210:intron 10.0%
!!! TATTTTTTGTCTTTATATAT+AGG - chr6_3:75625791-75625810 Msa0959210:CDS 10.0%
!!! ATTTCATTTTAAATTTTGTA+TGG - chr6_3:75626545-75626564 Msa0959210:intron 10.0%
!!! CATTAATTTTTATTCTTTTA+TGG + chr6_3:75626922-75626941 None:intergenic 10.0%
!! AATATAAAATAAACGTTAAT+AGG + chr6_3:75627151-75627170 None:intergenic 10.0%
!! AAAAAAAAAAAGACCATTTA+AGG + chr6_3:75624158-75624177 None:intergenic 15.0%
!! ATGAGTAAATAAATAGTATA+AGG + chr6_3:75624299-75624318 None:intergenic 15.0%
!! ACAAATTGATAAACTAAAAA+AGG - chr6_3:75624461-75624480 Msa0959210:CDS 15.0%
!! TTGAGTAAAACAAATTATAT+TGG - chr6_3:75624784-75624803 Msa0959210:intron 15.0%
!! TAATATGAATGTCTAAAAAA+TGG - chr6_3:75624885-75624904 Msa0959210:intron 15.0%
!!! ATACTTTTATATTTTGATGT+AGG + chr6_3:75625729-75625748 None:intergenic 15.0%
!! ATAAAGACAAAAAATAGTAT+AGG + chr6_3:75625787-75625806 None:intergenic 15.0%
!!! TTGTAATCAAAATGATTTTT+AGG - chr6_3:75626282-75626301 Msa0959210:CDS 15.0%
!!! AATCATTTTTACATCTTTTT+AGG - chr6_3:75626646-75626665 Msa0959210:intron 15.0%
!! TTGTAGAATTAATATTACAA+AGG + chr6_3:75627026-75627045 None:intergenic 15.0%
!! TTAACAACATTTAATTACAT+AGG - chr6_3:75627109-75627128 Msa0959210:CDS 15.0%
!!! TTTAATTACATAGGTTTTTT+TGG - chr6_3:75627118-75627137 Msa0959210:CDS 15.0%
!! AATTGATAAACTAAAAAAGG+AGG - chr6_3:75624464-75624483 Msa0959210:CDS 20.0%
!! ATGTGAACATTACAAATATA+AGG + chr6_3:75625039-75625058 None:intergenic 20.0%
!! GAGAATAATTAAAAGAATTG+AGG + chr6_3:75625062-75625081 None:intergenic 20.0%
!! AATATTAATGGTATACATGT+AGG - chr6_3:75625136-75625155 Msa0959210:intron 20.0%
!!! ATTGTTGTTTAATATTATCG+TGG - chr6_3:75625294-75625313 Msa0959210:intron 20.0%
!!! TTTTTGTCTTTATATATAGG+TGG - chr6_3:75625794-75625813 Msa0959210:CDS 20.0%
!!! ATTGTTTTATCTCTAAAGTT+TGG + chr6_3:75626082-75626101 None:intergenic 20.0%
!!! TTCTTTTAACAATAGAGTAA+TGG - chr6_3:75626253-75626272 Msa0959210:CDS 20.0%
!!! TAATCAAAATGATTTTTAGG+TGG - chr6_3:75626285-75626304 Msa0959210:CDS 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG - chr6_3:75626286-75626305 Msa0959210:CDS 20.0%
!! TGTAAAAAACTTATTATCCA+TGG - chr6_3:75626785-75626804 Msa0959210:intron 20.0%
!!! TATCTTGACATTTTAATTAG+TGG - chr6_3:75627052-75627071 Msa0959210:intron 20.0%
! AATTCTTTAAATCAACAGCA+AGG - chr6_3:75624077-75624096 Msa0959210:CDS 25.0%
!! ATGACACTTAATTGTTGTTA+TGG + chr6_3:75624372-75624391 None:intergenic 25.0%
!!! TGTATGTTTTGAATACATAC+AGG - chr6_3:75624416-75624435 Msa0959210:CDS 25.0%
!! AGACGAAATTAATCAAGTTT+TGG - chr6_3:75624581-75624600 Msa0959210:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG - chr6_3:75624612-75624631 Msa0959210:intron 25.0%
!! TAAGTTGAGATATATATACC+AGG + chr6_3:75624717-75624736 None:intergenic 25.0%
!! GTAATATTTGACTTTGTCAT+GGG - chr6_3:75624856-75624875 Msa0959210:intron 25.0%
! TGCAAGTAGAATTTCATTAT+GGG + chr6_3:75625625-75625644 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG + chr6_3:75625626-75625645 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG - chr6_3:75625626-75625645 Msa0959210:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG + chr6_3:75625953-75625972 None:intergenic 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG + chr6_3:75626431-75626450 None:intergenic 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG + chr6_3:75626432-75626451 None:intergenic 25.0%
!! AAATTTTGTATGGTTATCGA+AGG - chr6_3:75626555-75626574 Msa0959210:intron 25.0%
!! AATTTTGTATGGTTATCGAA+GGG - chr6_3:75626556-75626575 Msa0959210:intron 25.0%
!! AAAGTATCACTATAATGACT+TGG - chr6_3:75626681-75626700 Msa0959210:intron 25.0%
!! TCATGAAGATACATTTTTCT+TGG + chr6_3:75626707-75626726 None:intergenic 25.0%
!!! TATCCATGGTTTTATTAACT+CGG - chr6_3:75626799-75626818 Msa0959210:intron 25.0%
! AAGAAAAATGTATCATCATG+AGG - chr6_3:75626861-75626880 Msa0959210:intron 25.0%
! TGCAAAAAACTTATTATCCA+TGG - chr6_3:75626940-75626959 Msa0959210:intron 25.0%
!! CATAATAAGTTGACATAATG+AGG - chr6_3:75627465-75627484 Msa0959210:intron 25.0%
! GTACTTAGAATGTTATATGA+GGG - chr6_3:75627576-75627595 Msa0959210:intron 25.0%
CATCAATCCTAATGAGAAAT+CGG - chr6_3:75623971-75623990 Msa0959210:CDS 30.0%
ACGCATAACAAAACCTTAAA+TGG - chr6_3:75624142-75624161 Msa0959210:CDS 30.0%
GGAATGAAACTTGATATTCT+AGG - chr6_3:75624194-75624213 Msa0959210:CDS 30.0%
AATCCTGAGCTAATATTAAG+TGG + chr6_3:75624259-75624278 None:intergenic 30.0%
!!! ATCAAGTTGACTTTTTCCAT+GGG + chr6_3:75624522-75624541 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+TGG + chr6_3:75624523-75624542 None:intergenic 30.0%
! CGTAATATTTGACTTTGTCA+TGG - chr6_3:75624855-75624874 Msa0959210:intron 30.0%
TAAAAATTACAGGCTAACAG+TGG + chr6_3:75624915-75624934 None:intergenic 30.0%
GGTTCATGGTGAAAAAATAT+TGG - chr6_3:75625437-75625456 Msa0959210:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG - chr6_3:75625443-75625462 Msa0959210:CDS 30.0%
! TTCCAAATTCCTTTTGATGT+AGG + chr6_3:75625680-75625699 None:intergenic 30.0%
TTGTCTTTATATATAGGTGG+TGG - chr6_3:75625797-75625816 Msa0959210:CDS 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG - chr6_3:75625864-75625883 Msa0959210:CDS 30.0%
ATATTGGGGCTCAAAATATA+CGG + chr6_3:75625896-75625915 None:intergenic 30.0%
TTTCCTTGCTTGAGAATATT+GGG + chr6_3:75625911-75625930 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG + chr6_3:75625912-75625931 None:intergenic 30.0%
TGAATTAGAACTCTTTACTC+AGG - chr6_3:75625999-75626018 Msa0959210:intron 30.0%
AATTTACCCATCTTCAATCT+TGG - chr6_3:75626165-75626184 Msa0959210:CDS 30.0%
! GTTGCTTTATAAATCACTCT+TGG - chr6_3:75626346-75626365 Msa0959210:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG + chr6_3:75626430-75626449 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG - chr6_3:75627236-75627255 Msa0959210:CDS 30.0%
CACATATCAACAATATCAAG+TGG - chr6_3:75627267-75627286 Msa0959210:CDS 30.0%
CGTACTTAGAATGTTATATG+AGG - chr6_3:75627575-75627594 Msa0959210:intron 30.0%
TGAGGGAATATGATTTGAAT+AGG - chr6_3:75627593-75627612 Msa0959210:intron 30.0%
GAGGGAATATGATTTGAATA+GGG - chr6_3:75627594-75627613 Msa0959210:intron 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG + chr6_3:75627626-75627645 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG + chr6_3:75627639-75627658 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG - chr6_3:75627638-75627657 Msa0959210:intron 30.0%
! TGCAAAACCGATTTCTCATT+AGG + chr6_3:75623981-75624000 None:intergenic 35.0%
TCCTTATGCTTCAGATTCTA+TGG - chr6_3:75624049-75624068 Msa0959210:CDS 35.0%
! ACCATAGAATCTGAAGCATA+AGG + chr6_3:75624053-75624072 None:intergenic 35.0%
CTGAGCTAATATTAAGTGGT+TGG + chr6_3:75624255-75624274 None:intergenic 35.0%
CAACCACTTAATATTAGCTC+AGG - chr6_3:75624253-75624272 Msa0959210:intron 35.0%
! TTTTGCTAAATGCAGTCCAT+AGG - chr6_3:75624341-75624360 Msa0959210:intron 35.0%
TGTTGTTATGGATCAACCTA+TGG + chr6_3:75624360-75624379 None:intergenic 35.0%
!! ATTGACTCGATATGTCGTTT+GGG - chr6_3:75624540-75624559 Msa0959210:CDS 35.0%
!! ATTCTCTTGCTGTGCTATTT+AGG - chr6_3:75624661-75624680 Msa0959210:intron 35.0%
!! TTCTCTTGCTGTGCTATTTA+GGG - chr6_3:75624662-75624681 Msa0959210:intron 35.0%
GGAGTTGTCTAATATGTATC+CGG + chr6_3:75625018-75625037 None:intergenic 35.0%
AGATGTGTTCAACCAATTCA+AGG - chr6_3:75625335-75625354 Msa0959210:intron 35.0%
AGGAAACTTCAGTGAAACAA+TGG - chr6_3:75625365-75625384 Msa0959210:CDS 35.0%
! AAAAATATTGGAAGAGGCGT+TGG - chr6_3:75625449-75625468 Msa0959210:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+AGG + chr6_3:75625519-75625538 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG - chr6_3:75625635-75625654 Msa0959210:intron 35.0%
! ATTCCTTTTGATGTAGGCTT+TGG + chr6_3:75625674-75625693 None:intergenic 35.0%
AGCCTACATCAAAAGGAATT+TGG - chr6_3:75625675-75625694 Msa0959210:intron 35.0%
!! CTTTATATATAGGTGGTGGA+AGG - chr6_3:75625801-75625820 Msa0959210:CDS 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG - chr6_3:75625863-75625882 Msa0959210:CDS 35.0%
TTCCTTGCTTGAGAATATTG+GGG + chr6_3:75625910-75625929 None:intergenic 35.0%
GATGACACATATGATGCATA+TGG - chr6_3:75625967-75625986 Msa0959210:intron 35.0%
TCTTTACTCAGGCAATTGAA+AGG - chr6_3:75626010-75626029 Msa0959210:intron 35.0%
! CTAGTCATCAAGTTTAGAGT+TGG - chr6_3:75626120-75626139 Msa0959210:CDS 35.0%
TAGCAACCAAGATTGAAGAT+GGG + chr6_3:75626174-75626193 None:intergenic 35.0%
TTAGCAACCAAGATTGAAGA+TGG + chr6_3:75626175-75626194 None:intergenic 35.0%
TAGGTGGGATATTAATTGCT+TGG - chr6_3:75626301-75626320 Msa0959210:CDS 35.0%
TAAAGCAACTTCGTGTAATC+CGG + chr6_3:75626335-75626354 None:intergenic 35.0%
GAGCAAGAAATGAAGAAAGA+AGG - chr6_3:75626386-75626405 Msa0959210:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG + chr6_3:75626423-75626442 None:intergenic 35.0%
GAACCGAGTTAATAAAACCA+TGG + chr6_3:75626805-75626824 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG - chr6_3:75627197-75627216 Msa0959210:CDS 35.0%
TACGACTTCTTACATTGGAA+TGG - chr6_3:75627305-75627324 Msa0959210:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG - chr6_3:75627306-75627325 Msa0959210:CDS 35.0%
GACAAAAGACATCTTTGACT+GGG - chr6_3:75627338-75627357 Msa0959210:intron 35.0%
! GCAGCAGCATTAACAATTTT+TGG + chr6_3:75627375-75627394 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG - chr6_3:75627541-75627560 Msa0959210:intron 35.0%
CGCTTGGAAAGATATAAATC+AGG - chr6_3:75627654-75627673 Msa0959210:intron 35.0%
ACACACGTAAGAATAGGTAA+CGG + chr6_3:75627703-75627722 None:intergenic 35.0%
TTGAGAACACACGTAAGAAT+AGG + chr6_3:75627709-75627728 None:intergenic 35.0%
AAAAATCTCCCCATACGCTA+GGG + chr6_3:75624025-75624044 None:intergenic 40.0%
AAAAAATCTCCCCATACGCT+AGG + chr6_3:75624026-75624045 None:intergenic 40.0%
GGAACCTGATATGAATACTG+CGG - chr6_3:75624437-75624456 Msa0959210:CDS 40.0%
CTCAAAAACAGAGAAACCCA+TGG - chr6_3:75624503-75624522 Msa0959210:CDS 40.0%
!! GATTGACTCGATATGTCGTT+TGG - chr6_3:75624539-75624558 Msa0959210:CDS 40.0%
ATAGCACAGCAAGAGAATGA+AGG + chr6_3:75624659-75624678 None:intergenic 40.0%
!! AAGAGTGTCTTTCGTTTGAC+CGG - chr6_3:75624996-75625015 Msa0959210:intron 40.0%
!! GTGTTTCTGAAGTGCGAAAA+AGG + chr6_3:75625179-75625198 None:intergenic 40.0%
AACAATGGTCAGAGATGTTG+AGG - chr6_3:75625380-75625399 Msa0959210:CDS 40.0%
ACAATGGTCAGAGATGTTGA+GGG - chr6_3:75625381-75625400 Msa0959210:CDS 40.0%
GTATGAAGCCTCACATATGA+TGG - chr6_3:75625416-75625435 Msa0959210:CDS 40.0%
ACCATGAACCATCATATGTG+AGG + chr6_3:75625427-75625446 None:intergenic 40.0%
TTGCAAGAGAAGGACTCAAT+CGG + chr6_3:75625509-75625528 None:intergenic 40.0%
GGATGAATCTTGCTCATAGA+TGG + chr6_3:75625604-75625623 None:intergenic 40.0%
ACTACTCTATCTCGTGCATA+CGG + chr6_3:75625850-75625869 None:intergenic 40.0%
GTGGGATATTAATTGCTTGG+AGG - chr6_3:75626304-75626323 Msa0959210:CDS 40.0%
TAATTGCTTGGAGGATCTTC+CGG - chr6_3:75626313-75626332 Msa0959210:CDS 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG + chr6_3:75626424-75626443 None:intergenic 40.0%
TGGTTATCGAAGGGAAGTTT+AGG - chr6_3:75626565-75626584 Msa0959210:intron 40.0%
GAACTGAGTTCAGATAACCA+TGG + chr6_3:75626960-75626979 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG + chr6_3:75627223-75627242 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG - chr6_3:75627300-75627319 Msa0959210:CDS 40.0%
CGACAAAAGACATCTTTGAC+TGG - chr6_3:75627337-75627356 Msa0959210:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG - chr6_3:75627392-75627411 Msa0959210:intron 40.0%
!! ATAGGTAACGGAACATCAGT+TGG + chr6_3:75627691-75627710 None:intergenic 40.0%
!! CAATCTCTCGCGTTTTATTG+AGG - chr6_3:75627726-75627745 Msa0959210:CDS 40.0%
GATAACTACACACACTCTGA+CGG - chr6_3:75627766-75627785 Msa0959210:CDS 40.0%
AGATTTCCACCCTAGCGTAT+GGG - chr6_3:75624013-75624032 Msa0959210:CDS 45.0%
TGTGCCGCAGTATTCATATC+AGG + chr6_3:75624444-75624463 None:intergenic 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG - chr6_3:75624670-75624689 Msa0959210:intron 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG - chr6_3:75624678-75624697 Msa0959210:intron 45.0%
CATGGACTTTACGTTTCACC+TGG - chr6_3:75624696-75624715 Msa0959210:intron 45.0%
AACCAATTCAAGGACGAGCA+AGG - chr6_3:75625345-75625364 Msa0959210:intron 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG + chr6_3:75625350-75625369 None:intergenic 45.0%
GCCTCACATATGATGGTTCA+TGG - chr6_3:75625423-75625442 Msa0959210:CDS 45.0%
TGCAAGAGAAGGACTCAATC+GGG + chr6_3:75625508-75625527 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG - chr6_3:75625563-75625582 Msa0959210:intron 45.0%
! TAACTTCTTGCCACTAGCCT+AGG + chr6_3:75625576-75625595 None:intergenic 45.0%
GCTCCAAAGCCTACATCAAA+AGG - chr6_3:75625668-75625687 Msa0959210:intron 45.0%
!! ATATAGGTGGTGGAAGGAGT+TGG - chr6_3:75625807-75625826 Msa0959210:CDS 45.0%
AGCCCCAATATTCTCAAGCA+AGG - chr6_3:75625905-75625924 Msa0959210:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG + chr6_3:75627203-75627222 None:intergenic 45.0%
CTTATATGAGTGAGGCCAGA+TGG - chr6_3:75627205-75627224 Msa0959210:CDS 45.0%
TGCATGTACTCCTCTGTTGT+TGG + chr6_3:75627249-75627268 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG - chr6_3:75627281-75627300 Msa0959210:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG + chr6_3:75627296-75627315 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG + chr6_3:75627297-75627316 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG - chr6_3:75627385-75627404 Msa0959210:intron 45.0%
CTGCTATACATTGCAGGCTT+AGG - chr6_3:75627391-75627410 Msa0959210:intron 45.0%
GGATGAAATTGTGTCAAGCG+AGG - chr6_3:75627413-75627432 Msa0959210:intron 45.0%
!!! TTTTTTTTTTTTTTATCAAT+AGG - chr6_3:75624173-75624192 Msa0959210:CDS 5.0%
!!! ATTTTTTTTTGTTTTTAATT+TGG - chr6_3:75624753-75624772 Msa0959210:intron 5.0%
CAGATTTCCACCCTAGCGTA+TGG - chr6_3:75624012-75624031 Msa0959210:CDS 50.0%
GATTTCCACCCTAGCGTATG+GGG - chr6_3:75624014-75624033 Msa0959210:CDS 50.0%
!!! GAGGCGTTGGCTTTTACTTC+TGG - chr6_3:75625462-75625481 Msa0959210:CDS 50.0%
TTCTGGTCACCTTGAGTCCA+TGG - chr6_3:75625479-75625498 Msa0959210:intron 50.0%
AAGAGAAGGACTCAATCGGG+TGG + chr6_3:75625505-75625524 None:intergenic 50.0%
CTCTGCGCAAAAACTTGCCT+AGG - chr6_3:75625556-75625575 Msa0959210:intron 50.0%
AATCTCCCCATACGCTAGGG+TGG + chr6_3:75624022-75624041 None:intergenic 55.0%
ATCGGGTGGCCATGGACTCA+AGG + chr6_3:75625491-75625510 None:intergenic 60.0%
AGGACTCAATCGGGTGGCCA+TGG + chr6_3:75625499-75625518 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 75623954 75627840 75623954 ID=Msa0959210;Name=Msa0959210
chr6_3 mRNA 75623954 75627840 75623954 ID=Msa0959210-mRNA-1;Parent=Msa0959210;Name=Msa0959210-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|7|0|556
chr6_3 exon 75627724 75627840 75627724 ID=Msa0959210-mRNA-1:exon:13570;Parent=Msa0959210-mRNA-1
chr6_3 exon 75627077 75627356 75627077 ID=Msa0959210-mRNA-1:exon:13569;Parent=Msa0959210-mRNA-1
chr6_3 exon 75626085 75626457 75626085 ID=Msa0959210-mRNA-1:exon:13568;Parent=Msa0959210-mRNA-1
chr6_3 exon 75625763 75625981 75625763 ID=Msa0959210-mRNA-1:exon:13567;Parent=Msa0959210-mRNA-1
chr6_3 exon 75625352 75625490 75625352 ID=Msa0959210-mRNA-1:exon:13566;Parent=Msa0959210-mRNA-1
chr6_3 exon 75624360 75624608 75624360 ID=Msa0959210-mRNA-1:exon:13565;Parent=Msa0959210-mRNA-1
chr6_3 exon 75623954 75624247 75623954 ID=Msa0959210-mRNA-1:exon:13564;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75627724 75627840 75627724 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75627077 75627356 75627077 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75626085 75626457 75626085 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75625763 75625981 75625763 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75625352 75625490 75625352 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75624360 75624608 75624360 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
chr6_3 CDS 75623954 75624247 75623954 ID=Msa0959210-mRNA-1:cds;Parent=Msa0959210-mRNA-1
Gene Sequence

>Msa0959210

ATGTCTTCAGTAGATTACATCAATCCTAATGAGAAATCGGTTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTATGGGGAGATTTTTTCATTCCTTATGCTTCAGATTCTATGGAACCTGATATGAATACTGCGGCACAAATTGATAAACTAAAAAAGGAGGTTAGACAAATGCTTGTCTCAAAAACAGAGAAACCCATGGAAAAAGTCAACTTGATTGACTCGATATGTCGTTTGGGTGTGAGCTATCATTTTGAAGACGAAATTAATCAAGTTTTGGAACATATTTACAAGAGTTATGTTCAAAATGGAGAAATAACTCTCAAAGACAACCTTCATTCTCTTGCTGTGCTATTTAGGGTGTTGAGGCAACATGGACTTTACGTTTCACCTGATGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAACAATGGTCAGAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGATGGTTCATGGTGAAAAAATATTGGAAGAGGCGTTGGCTTTTACTTCTGGTCACCTTGAGTCCATGGCCACCCGATTGAGTCCTTCTCTTGCAACACAAGTAAAACAAAGCTTAAGACAATCTCTGCGCAAAAACTTGCCTAGGCTAGTGGCAAGAAGTTACATTTCCATCTATGAGCAAGATTCATCCCATAATGAAATTCTACTTGCATTGGCAAAATTGGATTTTAATATGCTCCAAAGCCTACATCAAAAGGAATTTGGAAACATTAGCAAGTGGTGGAAGGAGTTGGATATTGCTCAAAAACTACCGTATGCACGAGATAGAGTAGTAGAATGTTGCTTTTGGGTTATGACCGTATATTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATATGATGCATATGGAACTATTGATGAATTAGAACTCTTTACTCAGGCAATTGAAAGGTGGGATATTAATTGCTTGGAGGATCTTCCGGATTACACGAAGTTGCTTTATAAATCACTCTTGGATGTTTATCAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGACTGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGCGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTAGAATGTTATATGAGGGAATATGATTTGAATAGGGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAGGAATGTCTTAAGCCAACTGATGTTCCGTTACCTATTCTTACGTGTGTTCTCAATCTCTCGCGTTTTATTGAGGTTTTTTACAAAGATACAGATAACTACACACACTCTGACGGATTGATGAAGACATATATTAATGATTTGCTTGTCAATCCCATAGAAATTTGA
Protein sequence

>Msa0959210

MSSVDYINPNEKSVLQRNVADFHPSVWGDFFIPYASDSMEPDMNTAAQIDKLKKEVRQMLVSKTEKPMEKVNLIDSICRLGVSYHFEDEINQVLEHIYKSYVQNGEITLKDNLHSLAVLFRVLRQHGLYVSPDVFNQFKDEQGNFSETMVRDVEGMLNLYEASHMMVHGEKILEEALAFTSGHLESMATRLSPSLATQVKQSLRQSLRKNLPRLVARSYISIYEQDSSHNEILLALAKLDFNMLQSLHQKEFGNISKWWKELDIAQKLPYARDRVVECCFWVMTVYFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTQAIERWDINCLEDLPDYTKLLYKSLLDVYQEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDWVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDLNREAAIQECQKKIDNAWKDINQECLKPTDVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPIEI*