AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0916290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0916290 MtrunA17_Chr7g0236991 63.489 556 148 2 1 504 1 553 0.0 726
Msa0916290 MtrunA17_Chr7g0237001 63.309 556 149 2 1 504 1 553 0.0 724
Msa0916290 MtrunA17_Chr7g0237041 63.309 556 149 2 1 504 1 553 0.0 724
Msa0916290 MtrunA17_Chr7g0237081 63.309 556 149 2 1 504 1 553 0.0 724
Msa0916290 MtrunA17_Chr7g0237051 63.309 556 149 2 1 504 1 553 0.0 724
Msa0916290 MtrunA17_Chr6g0466051 62.590 556 153 2 1 504 1 553 0.0 712
Msa0916290 MtrunA17_Chr6g0465911 62.410 556 154 2 1 504 1 553 0.0 711
Msa0916290 MtrunA17_Chr5g0425371 61.151 556 161 2 1 504 1 553 0.0 696
Msa0916290 MtrunA17_Chr6g0465441 60.971 556 162 2 1 504 1 553 0.0 694
Msa0916290 MtrunA17_Chr6g0451711 60.144 557 169 2 1 504 1 557 0.0 692
Msa0916290 MtrunA17_Chr3g0105071 59.246 557 174 2 1 504 1 557 0.0 677
Msa0916290 MtrunA17_Chr6g0465851 62.934 518 140 1 39 504 1 518 0.0 665
Msa0916290 MtrunA17_Chr3g0082691 58.974 546 171 2 12 504 8 553 0.0 662
Msa0916290 MtrunA17_Chr4g0024691 59.016 549 173 1 8 504 13 561 0.0 660
Msa0916290 MtrunA17_Chr7g0236961 63.855 498 128 1 59 504 1 498 0.0 658
Msa0916290 MtrunA17_Chr7g0237011 63.855 498 128 1 59 504 1 498 0.0 657
Msa0916290 MtrunA17_Chr5g0431571 60.110 544 164 2 12 502 4 547 0.0 653
Msa0916290 MtrunA17_Chr5g0431651 57.326 546 179 3 13 504 7 552 0.0 636
Msa0916290 MtrunA17_Chr4g0042111 51.526 557 215 3 2 504 7 562 0.0 577
Msa0916290 MtrunA17_Chr7g0236971 61.097 401 104 1 156 504 1 401 9.15e-178 505
Msa0916290 MtrunA17_Chr6g0465981 61.170 376 91 2 1 324 1 373 3.29e-160 459
Msa0916290 MtrunA17_Chr6g0465871 61.170 376 91 2 1 324 1 373 3.29e-160 459
Msa0916290 MtrunA17_Chr6g0466081 61.170 376 91 2 1 324 1 373 3.29e-160 459
Msa0916290 MtrunA17_Chr6g0466111 61.834 338 77 1 39 324 1 338 3.33e-143 414
Msa0916290 MtrunA17_Chr2g0319041 40.328 548 267 9 15 504 12 557 6.99e-143 422
Msa0916290 MtrunA17_Chr6g0465931 61.538 338 78 1 39 324 1 338 4.59e-142 412
Msa0916290 MtrunA17_Chr7g0236951 62.300 313 66 1 59 319 1 313 6.89e-135 392
Msa0916290 MtrunA17_Chr7g0237031 62.300 313 66 1 59 319 1 313 2.02e-134 391
Msa0916290 MtrunA17_Chr8g0336181 38.727 550 277 7 13 504 9 556 5.95e-133 396
Msa0916290 MtrunA17_Chr2g0319051 39.173 508 251 7 53 504 9 514 6.36e-131 390
Msa0916290 MtrunA17_Chr6g0466031 65.385 260 90 0 245 504 1 260 8.27e-122 357
Msa0916290 MtrunA17_Chr7g0237061 61.154 260 78 2 245 504 1 237 8.76e-108 320
Msa0916290 MtrunA17_Chr6g0466021 70.707 198 55 1 1 198 1 195 6.83e-98 294
Msa0916290 MtrunA17_Chr4g0008621 40.000 400 184 5 15 358 19 418 4.70e-95 295
Msa0916290 MtrunA17_Chr4g0023911 31.136 546 313 5 13 502 41 579 2.86e-93 295
Msa0916290 MtrunA17_Chr7g0237021 68.605 172 54 0 333 504 1 172 3.16e-85 260
Msa0916290 MtrunA17_Chr7g0236941 68.605 172 54 0 333 504 1 172 3.16e-85 260
Msa0916290 MtrunA17_Chr2g0310331 33.026 542 297 11 17 502 53 584 9.73e-82 265
Msa0916290 MtrunA17_Chr2g0319071 32.193 497 253 12 53 502 28 487 1.42e-81 262
Msa0916290 MtrunA17_Chr2g0323131 30.724 511 283 8 49 502 67 563 3.85e-79 258
Msa0916290 MtrunA17_Chr6g0465941 65.116 172 60 0 333 504 1 172 7.18e-79 244
Msa0916290 MtrunA17_Chr6g0466121 65.116 172 60 0 333 504 1 172 7.18e-79 244
Msa0916290 MtrunA17_Chr6g0465991 65.116 172 60 0 333 504 1 172 7.18e-79 244
Msa0916290 MtrunA17_Chr6g0466091 65.116 172 60 0 333 504 1 172 7.18e-79 244
Msa0916290 MtrunA17_Chr6g0465881 64.535 172 61 0 333 504 1 172 3.68e-78 242
Msa0916290 MtrunA17_Chr2g0323151 31.838 468 252 5 71 482 4 460 4.72e-78 252
Msa0916290 MtrunA17_Chr2g0319081 39.535 301 167 5 206 504 140 427 6.64e-75 243
Msa0916290 MtrunA17_Chr2g0319081 39.344 122 73 1 15 135 19 140 1.73e-22 99.8
Msa0916290 MtrunA17_Chr5g0445501 61.628 172 66 0 333 504 1 172 2.14e-74 232
Msa0916290 MtrunA17_Chr4g0048921 31.373 510 287 7 44 498 64 565 2.76e-74 245
Msa0916290 MtrunA17_Chr8g0357411 29.091 550 329 8 7 502 45 587 4.34e-73 242
Msa0916290 MtrunA17_Chr4g0048911 29.112 529 312 10 25 496 34 556 9.27e-73 241
Msa0916290 MtrunA17_Chr5g0445511 48.536 239 71 1 151 337 1 239 1.92e-72 229
Msa0916290 MtrunA17_Chr7g0236921 63.291 158 54 1 351 504 1 158 1.75e-69 219
Msa0916290 MtrunA17_Chr7g0237071 74.286 140 36 0 59 198 1 140 9.16e-67 214
Msa0916290 MtrunA17_Chr7g0236931 61.039 154 57 1 351 504 1 151 1.11e-64 206
Msa0916290 MtrunA17_Chr7g0236981 65.926 135 43 1 1 135 1 132 5.01e-58 189
Msa0916290 MtrunA17_Chr2g0280581 27.237 514 305 11 47 495 9 518 1.95e-56 196
Msa0916290 MtrunA17_Chr6g0477111 27.696 473 284 8 73 487 6 478 1.50e-55 193
Msa0916290 MtrunA17_Chr3g0105691 27.515 487 294 9 54 482 46 531 6.41e-55 193
Msa0916290 MtrunA17_Chr3g0099031 27.038 503 306 8 54 498 13 512 1.61e-54 191
Msa0916290 MtrunA17_Chr2g0310401 29.206 428 246 6 130 502 5 430 2.41e-52 183
Msa0916290 MtrunA17_Chr3g0108941 26.389 504 309 13 54 498 13 513 1.49e-50 180
Msa0916290 MtrunA17_Chr3g0109031 26.176 489 298 11 54 482 13 498 3.01e-50 179
Msa0916290 MtrunA17_Chr3g0109001 26.735 490 295 12 54 482 13 499 5.54e-49 176
Msa0916290 MtrunA17_Chr7g0217361 32.226 301 203 1 203 502 8 308 1.73e-48 169
Msa0916290 MtrunA17_Chr3g0109021 26.176 489 298 10 54 482 13 498 2.63e-48 174
Msa0916290 MtrunA17_Chr3g0108991 25.257 487 305 10 54 482 13 498 4.55e-47 171
Msa0916290 MtrunA17_Chr3g0108951 25.257 487 305 10 54 482 13 498 4.55e-47 171
Msa0916290 MtrunA17_Chr3g0108981 26.261 476 288 11 68 482 1 474 6.29e-47 170
Msa0916290 MtrunA17_Chr3g0108961 26.261 476 288 11 68 482 1 474 6.29e-47 170
Msa0916290 MtrunA17_Chr3g0108971 24.947 473 297 9 68 482 1 473 5.82e-46 167
Msa0916290 MtrunA17_Chr6g0477121 27.053 414 241 7 133 487 10 421 7.83e-46 165
Msa0916290 MtrunA17_Chr3g0109011 24.842 475 295 9 68 482 1 473 1.51e-44 163
Msa0916290 MtrunA17_Chr5g0445521 65.306 98 34 0 1 98 1 98 4.75e-40 140
Msa0916290 MtrunA17_Chr8g0357231 28.682 258 182 2 246 502 1 257 8.63e-34 128
Msa0916290 MtrunA17_Chr3g0082711 48.276 116 43 1 389 504 1 99 9.92e-32 117
Msa0916290 MtrunA17_Chr8g0357221 37.853 177 104 2 10 186 48 218 1.98e-29 117
Msa0916290 MtrunA17_Chr7g0233861 58.824 85 26 1 194 278 83 158 3.90e-26 105
Msa0916290 MtrunA17_Chr3g0101681 21.195 519 309 16 70 502 276 780 9.09e-17 83.6
Msa0916290 MtrunA17_Chr2g0281651 23.548 310 223 9 199 502 61 362 3.83e-16 80.5
Msa0916290 MtrunA17_Chr7g0259881 33.125 160 92 4 68 221 227 377 1.30e-15 79.7
Msa0916290 MtrunA17_Chr7g0217351 32.051 156 99 4 46 199 62 212 4.08e-14 73.2
Msa0916290 MtrunA17_Chr7g0218001 33.871 124 76 2 68 185 344 467 2.58e-13 72.8
Msa0916290 MtrunA17_Chr2g0310411 32.540 126 69 4 10 131 51 164 3.37e-13 67.8
Msa0916290 MtrunA17_Chr2g0310121 20.732 328 228 11 191 502 468 779 6.73e-12 68.2
Msa0916290 MtrunA17_Chr2g0310121 34.746 118 74 3 70 185 275 391 1.68e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0916290 AT5G23960.2 34.489 548 298 6 13 504 3 545 1.17e-116 354
Msa0916290 AT5G23960.1 34.483 551 296 8 13 504 3 547 1.47e-115 352
Msa0916290 AT3G14490.1 33.150 546 303 7 17 504 60 601 5.58e-101 316
Msa0916290 AT3G14520.1 31.423 541 309 6 22 504 68 604 1.62e-97 307
Msa0916290 AT1G31950.3 31.204 548 302 7 22 504 70 607 8.22e-97 305
Msa0916290 AT1G31950.1 31.423 541 309 6 22 504 70 606 1.01e-96 305
Msa0916290 AT1G33750.1 31.273 534 311 4 24 504 73 603 1.05e-95 302
Msa0916290 AT3G14540.1 31.481 540 310 5 22 504 65 601 2.30e-95 301
Msa0916290 AT3G29410.1 32.044 543 311 7 17 504 64 603 2.05e-94 299
Msa0916290 AT5G44630.1 31.752 548 305 9 18 502 14 555 2.53e-93 295
Msa0916290 AT3G32030.1 30.556 540 315 7 22 504 68 604 1.28e-92 294
Msa0916290 AT3G29410.2 32.200 500 283 5 59 504 1 498 5.74e-90 284
Msa0916290 AT4G20200.1 31.853 518 287 9 48 504 92 604 1.92e-89 286
Msa0916290 AT4G20210.1 29.927 548 319 8 17 504 58 600 3.43e-89 285
Msa0916290 AT3G29190.1 29.502 522 300 8 45 504 86 601 9.20e-81 263
Msa0916290 AT4G15870.1 30.129 541 300 11 25 504 75 598 2.82e-79 259
Msa0916290 AT1G31950.2 31.533 463 242 7 22 419 70 522 3.09e-79 257
Msa0916290 AT3G14540.2 32.063 446 244 4 22 411 65 507 1.78e-78 254
Msa0916290 AT3G29110.1 30.331 544 318 9 17 502 55 595 8.01e-77 253
Msa0916290 AT1G48800.1 29.121 546 319 10 17 500 63 602 1.73e-76 252
Msa0916290 AT4G20230.1 28.942 539 313 10 25 500 70 601 6.29e-75 248
Msa0916290 AT4G20230.2 28.942 539 313 10 25 500 82 613 6.75e-75 248
Msa0916290 AT1G61680.1 30.279 502 280 7 54 494 77 569 2.72e-74 245
Msa0916290 AT1G66020.1 28.413 542 327 8 17 500 56 594 1.32e-72 241
Msa0916290 AT5G48110.1 37.013 308 189 5 198 504 36 339 1.08e-71 231
Msa0916290 AT1G61680.2 29.880 502 275 8 54 494 77 562 9.02e-71 236
Msa0916290 AT1G70080.1 36.066 305 193 2 198 500 303 607 1.41e-69 234
Msa0916290 AT1G70080.1 38.333 180 107 4 8 185 57 234 1.57e-30 125
Msa0916290 AT1G48820.1 27.644 539 288 12 17 497 63 557 1.28e-63 217
Msa0916290 AT2G23230.2 28.000 550 329 14 16 503 55 599 5.73e-63 216
Msa0916290 AT3G25820.1 27.158 556 333 13 15 504 45 594 1.86e-62 214
Msa0916290 AT3G25830.1 27.158 556 333 13 15 504 45 594 1.86e-62 214
Msa0916290 AT2G23230.1 27.818 550 325 15 16 503 55 594 1.36e-60 209
Msa0916290 AT2G24210.1 25.000 556 352 11 10 504 39 590 5.77e-56 197
Msa0916290 AT4G13300.1 31.715 309 209 2 198 504 246 554 5.90e-55 193
Msa0916290 AT4G13300.1 38.554 166 95 4 25 187 20 181 1.15e-25 110
Msa0916290 AT4G13280.2 31.392 309 210 2 198 504 246 554 1.07e-54 192
Msa0916290 AT4G13280.2 37.195 164 96 4 27 187 22 181 3.29e-21 97.4
Msa0916290 AT1G66020.2 29.810 369 198 8 17 327 56 421 3.29e-47 169
Msa0916290 AT4G16730.2 29.073 313 213 5 198 504 184 493 5.25e-47 171
Msa0916290 AT4G16730.2 37.500 128 76 2 73 199 1 125 4.50e-18 87.4
Msa0916290 AT4G16730.1 29.260 311 211 5 198 502 230 537 9.07e-47 171
Msa0916290 AT4G16730.1 34.483 174 108 4 28 199 2 171 6.30e-21 96.3
Msa0916290 AT3G25810.1 29.870 308 210 3 203 504 290 597 2.32e-45 168
Msa0916290 AT3G25810.1 30.769 169 105 4 15 177 45 207 1.22e-14 77.0
Msa0916290 AT3G25820.2 28.198 383 210 9 15 337 45 422 9.71e-45 163
Msa0916290 AT4G16740.1 30.844 308 206 6 199 504 262 564 4.18e-44 164
Msa0916290 AT4G16740.1 32.961 179 107 5 12 185 21 191 5.27e-20 93.6
Msa0916290 AT4G13280.1 29.773 309 185 4 198 504 246 524 1.56e-43 161
Msa0916290 AT4G13280.1 37.195 164 96 4 27 187 22 181 1.99e-21 97.8
Msa0916290 AT4G16740.2 27.676 383 200 9 12 329 21 391 3.78e-42 155
Msa0916290 AT3G25820.4 28.173 323 169 7 15 278 45 363 4.56e-37 141
Msa0916290 AT3G25820.3 28.173 323 169 7 15 278 45 363 4.56e-37 141
Msa0916290 AT1G79460.1 22.485 507 304 16 70 494 274 773 4.51e-21 97.4
Msa0916290 AT4G16740.4 32.778 180 108 5 14 188 23 194 1.22e-20 94.0
Msa0916290 AT4G16740.4 37.500 80 50 0 199 278 262 341 6.01e-15 77.0
Msa0916290 AT4G16740.3 32.778 180 108 5 14 188 23 194 1.22e-20 94.0
Msa0916290 AT4G16740.3 37.500 80 50 0 199 278 262 341 6.01e-15 77.0
Msa0916290 AT4G02780.1 34.959 123 74 2 68 184 329 451 8.04e-14 74.7
Msa0916290 AT1G61120.1 20.370 324 250 5 183 504 467 784 1.07e-11 68.2

Find 85 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACTTGCTGTGCTATTT+AGG 0.113115 6_2:+35741505 Msa0916290:CDS
TTCACTTGCTGTGCTATTTA+GGG 0.203680 6_2:+35741506 Msa0916290:CDS
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6_2:-35742720 None:intergenic
TACAAGAGTTATGTTCAAAA+TGG 0.269625 6_2:+35741456 Msa0916290:CDS
TCCTTATGCTTCAGAATCTA+TGG 0.272455 6_2:+35740904 Msa0916290:CDS
AGCCTGCATCAAAAGGAATT+TGG 0.274366 6_2:+35742488 Msa0916290:intron
CTGCTATACATTGCAGGCTT+AGG 0.276774 6_2:+35744191 Msa0916290:CDS
AGACGAAATTAATCAAGTTT+TGG 0.301364 6_2:+35741425 Msa0916290:CDS
TAATTGCATGGAGGATCTTC+CGG 0.302913 6_2:+35743112 Msa0916290:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6_2:-35742762 None:intergenic
CAGATTTCCACCCTAGCGTT+TGG 0.311610 6_2:+35740867 Msa0916290:CDS
AGATTTCCACCCTAGCGTTT+GGG 0.325288 6_2:+35740868 Msa0916290:CDS
TGCAAAACCGATTTCTCATT+AGG 0.335406 6_2:-35740833 None:intergenic
TTTGCGGCAATATTCATATC+AGG 0.335782 6_2:-35741285 None:intergenic
TGAGGGAATATGATATGAAT+AGG 0.340079 6_2:+35744393 Msa0916290:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6_2:-35742160 None:intergenic
GAGTAGTTGAATGTTGCTTT+TGG 0.353926 6_2:+35742675 Msa0916290:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6_2:+35744185 Msa0916290:CDS
AATTGCATGGAGGATCTTCC+GGG 0.355403 6_2:+35743113 Msa0916290:CDS
AGGACATGTTTCTTCGTACT+TGG 0.361077 6_2:+35744361 Msa0916290:CDS
GACATATATTAATGATTTGC+TGG 0.369605 6_2:+35744598 Msa0916290:CDS
CATCAATCCTAATGAGAAAT+CGG 0.381109 6_2:+35740826 Msa0916290:CDS
CGTACTTGGAATGTTATATG+AGG 0.388936 6_2:+35744375 Msa0916290:CDS
GATTGACTCAATATGTCGTT+TGG 0.390339 6_2:+35741383 Msa0916290:CDS
CGACAAAAGACATCTTTGAT+TGG 0.390521 6_2:+35744137 Msa0916290:CDS
GTTGCTTTATAAATCACTCT+TGG 0.404999 6_2:+35743145 Msa0916290:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6_2:-35744046 None:intergenic
ATAAATACTCAAATTTCTAA+AGG 0.433133 6_2:-35744626 None:intergenic
GACAAAAGACATCTTTGATT+GGG 0.442878 6_2:+35744138 Msa0916290:CDS
AAAAGAAAATTGACAACGCT+TGG 0.444020 6_2:+35744438 Msa0916290:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6_2:+35744192 Msa0916290:CDS
TACGACTTCTTACATTGGAA+TGG 0.454510 6_2:+35744105 Msa0916290:CDS
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6_2:-35744020 None:intergenic
GATGACACATACGATGCATA+TGG 0.460937 6_2:+35742779 Msa0916290:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6_2:+35744106 Msa0916290:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6_2:+35743185 Msa0916290:CDS
ATTGACTCAATATGTCGTTT+GGG 0.473862 6_2:+35741384 Msa0916290:CDS
GAGGGAATATGATATGAATA+GGG 0.475500 6_2:+35744394 Msa0916290:CDS
TTGCAAGAGAAGGACTCAAT+CGG 0.484754 6_2:-35742319 None:intergenic
CGCTTGGAAAGATATAAATC+AGG 0.490061 6_2:+35744454 Msa0916290:CDS
TTCTGGTCACCTTGAGTCGA+TGG 0.501829 6_2:+35742292 Msa0916290:CDS
CTGTGCTATTTAGGGTGTTG+AGG 0.502767 6_2:+35741514 Msa0916290:CDS
TTGAGAACACACGTCAGAAT+AGG 0.502783 6_2:-35744506 None:intergenic
CATGGACTTTACGTTTCACC+TGG 0.512238 6_2:+35741540 Msa0916290:CDS
ATACAGGTGGTGGAAGGAGT+TGG 0.512387 6_2:+35742619 Msa0916290:intron
AGATGTGTTCAACCAATTCA+AGG 0.513117 6_2:+35742148 Msa0916290:intron
ACCATAGATTCTGAAGCATA+AGG 0.518574 6_2:-35740905 None:intergenic
GCCTCACATATGATGGTTCA+TGG 0.522278 6_2:+35742236 Msa0916290:CDS
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6_2:-35744094 None:intergenic
TGGCCTCACTCATATAAGCT+TGG 0.531321 6_2:-35744000 None:intergenic
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6_2:-35742719 None:intergenic
ATAGGTAACGGAACTTCAGT+TGG 0.538099 6_2:-35744488 None:intergenic
AAACAGTTTGAGCAGAAAAG+AGG 0.539017 6_2:+35744341 Msa0916290:intron
TAGGTGGGATATTAATTGCA+TGG 0.539587 6_2:+35743100 Msa0916290:intron
AACATTGGTCGTAGATGTTG+AGG 0.541350 6_2:+35742193 Msa0916290:CDS
TGCAAGAGAAGGACTCAATC+GGG 0.546913 6_2:-35742318 None:intergenic
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6_2:+35742717 Msa0916290:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6_2:+35744005 Msa0916290:CDS
TTTAGGGTGTTGAGGCAACA+TGG 0.552007 6_2:+35741522 Msa0916290:CDS
TTTACTTGTGTTGCAAGAGA+AGG 0.558925 6_2:-35742329 None:intergenic
ATCGGGTGGCCATCGACTCA+AGG 0.563910 6_2:-35742301 None:intergenic
GTACTTGGAATGTTATATGA+GGG 0.567173 6_2:+35744376 Msa0916290:CDS
GTATGAAGCCTCACATATGA+TGG 0.567934 6_2:+35742229 Msa0916290:CDS
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6_2:+35744081 Msa0916290:CDS
ATAGCACAGCAAGTGAATGA+AGG 0.574168 6_2:-35741500 None:intergenic
CTTTATATACAGGTGGTGGA+AGG 0.574461 6_2:+35742613 Msa0916290:intron
TAAAGCAACTTCATGTAACC+CGG 0.582030 6_2:-35743131 None:intergenic
TTGGCTACGACTTCTTACAT+TGG 0.586299 6_2:+35744100 Msa0916290:CDS
AGGAAACTTCAGTGAAACAT+TGG 0.587870 6_2:+35742178 Msa0916290:CDS
ACTACTCTATCTCGTGCATA+CGG 0.592321 6_2:-35742659 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6_2:+35744067 Msa0916290:CDS
GATTTCCACCCTAGCGTTTG+GGG 0.596026 6_2:+35740869 Msa0916290:CDS
AATCTCCCCAAACGCTAGGG+TGG 0.601357 6_2:-35740874 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6_2:+35744566 Msa0916290:CDS
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6_2:-35744093 None:intergenic
AACCAATTCAAGGACGAGCA+AGG 0.615624 6_2:+35742158 Msa0916290:CDS
ATATTGGGGCTCAAAACATA+CGG 0.620967 6_2:-35742705 None:intergenic
ACATTGGTCGTAGATGTTGA+GGG 0.633793 6_2:+35742194 Msa0916290:CDS
ACCATGAACCATCATATGTG+AGG 0.634158 6_2:-35742237 None:intergenic
AATCCAAGCTTATATGAGTG+AGG 0.644710 6_2:+35743997 Msa0916290:CDS
GGATGAAATTGTGTCAAGCG+AGG 0.666273 6_2:+35744213 Msa0916290:CDS
ACACACGTCAGAATAGGTAA+CGG 0.688917 6_2:-35744500 None:intergenic
AAGAGAAGGACTCAATCGGG+TGG 0.695745 6_2:-35742315 None:intergenic
TAACTATATACCAACAACAG+AGG 0.703519 6_2:+35744036 Msa0916290:CDS
GTGGGATATTAATTGCATGG+AGG 0.718260 6_2:+35743103 Msa0916290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTATCAAC+AGG + chr6_2:35741024-35741043 Msa0916290:intron 10.0%
!! AAAAATTGATAAACTAAAAA+AGG + chr6_2:35741305-35741324 Msa0916290:CDS 10.0%
!!! CATTTTTTATGTTTTTAATT+TGG + chr6_2:35741596-35741615 Msa0916290:intron 10.0%
!! GAAAAAAAATTACATAAAAT+AGG + chr6_2:35741790-35741809 Msa0916290:intron 10.0%
!! TGATTATAAAGTAATATTAA+TGG + chr6_2:35741905-35741924 Msa0916290:intron 10.0%
!!! AATTTCATTTAAATTTTTTG+TGG + chr6_2:35743343-35743362 Msa0916290:intron 10.0%
!!! TAATTACATAGTTTTTTTTT+TGG + chr6_2:35743918-35743937 Msa0916290:intron 10.0%
!! CATATAAAATAAATGTTAAT+AGG - chr6_2:35743951-35743970 None:intergenic 10.0%
!!! CTATTAACATTTATTTTATA+TGG + chr6_2:35743949-35743968 Msa0916290:intron 10.0%
!! AATAAAAAAAAGACCATTTA+AGG - chr6_2:35741014-35741033 None:intergenic 15.0%
!! ATGAGTAAATAAATAGTATA+AGG - chr6_2:35741150-35741169 None:intergenic 15.0%
!!! TTTTAGTTTATCAATTTTTG+CGG - chr6_2:35741304-35741323 None:intergenic 15.0%
!! TAATATGAATGTCTAAAAAA+TGG + chr6_2:35741721-35741740 Msa0916290:intron 15.0%
!!! ATTGTTGTTTAATATTATTG+TGG + chr6_2:35742107-35742126 Msa0916290:intron 15.0%
!!! TATTGTTTATCTTTAAAGTT+TGG - chr6_2:35742894-35742913 None:intergenic 15.0%
!! TGTAAAAAACTTATTATCTA+TGG + chr6_2:35743582-35743601 Msa0916290:intron 15.0%
!! TTGTAGAATTAATATTACAA+AGG - chr6_2:35743824-35743843 None:intergenic 15.0%
!! AATTGATAAACTAAAAAAGG+AGG + chr6_2:35741308-35741327 Msa0916290:CDS 20.0%
!!! AATTCTCTTTTTACTAAAAG+TGG - chr6_2:35741751-35741770 None:intergenic 20.0%
!! AAAAAAGGTTCTTACTTAAT+AGG - chr6_2:35741945-35741964 None:intergenic 20.0%
!!! CTATTTTTGTCTTTATATAC+AGG + chr6_2:35742603-35742622 Msa0916290:intron 20.0%
!!! TGAATTAGAACTTTTTACTA+AGG + chr6_2:35742811-35742830 Msa0916290:CDS 20.0%
!!! TGATTCTTTTAATAGAGTAA+TGG + chr6_2:35743052-35743071 Msa0916290:intron 20.0%
!!! TTGCAATCAAAATGATTTTT+AGG + chr6_2:35743081-35743100 Msa0916290:intron 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG + chr6_2:35743085-35743104 Msa0916290:intron 20.0%
!!! AATTTTTTGTGGTTATCAAA+TGG + chr6_2:35743354-35743373 Msa0916290:intron 20.0%
!!! TATCTTGACATTTTAATTAC+TGG + chr6_2:35743850-35743869 Msa0916290:intron 20.0%
! ATTCTTTAAATCAACAGCAA+AGG + chr6_2:35740933-35740952 Msa0916290:intron 25.0%
! AATGACACTTAATTGTTGTA+TGG - chr6_2:35741223-35741242 None:intergenic 25.0%
!!! ATCATGTTTTGAATACATAC+AGG + chr6_2:35741260-35741279 Msa0916290:intron 25.0%
!! AGACGAAATTAATCAAGTTT+TGG + chr6_2:35741425-35741444 Msa0916290:CDS 25.0%
! TACAAGAGTTATGTTCAAAA+TGG + chr6_2:35741456-35741475 Msa0916290:CDS 25.0%
!! TAAGTTGAGATATATATACC+AGG - chr6_2:35741561-35741580 None:intergenic 25.0%
! TTGAGTAAAACAAATTAGAC+AGG + chr6_2:35741627-35741646 Msa0916290:intron 25.0%
!! GTAATATTTGACTTTGTCAT+GGG + chr6_2:35741692-35741711 Msa0916290:intron 25.0%
! GAGAATAATTAAAAGAGATG+AGG - chr6_2:35741843-35741862 None:intergenic 25.0%
! AATATTAATGGCATACATGT+AGG + chr6_2:35741917-35741936 Msa0916290:intron 25.0%
! TGCAAGTAGAATTTCATTAT+GGG - chr6_2:35742438-35742457 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG - chr6_2:35742439-35742458 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG + chr6_2:35742439-35742458 Msa0916290:intron 25.0%
!! TTTTTGTCTTTATATACAGG+TGG + chr6_2:35742606-35742625 Msa0916290:intron 25.0%
! GTCATCAATGTATGATAAAA+TGG - chr6_2:35742765-35742784 None:intergenic 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + chr6_2:35742822-35742841 Msa0916290:CDS 25.0%
!! TCTTTAATCTAGTTTAGAGT+TGG + chr6_2:35742923-35742942 Msa0916290:intron 25.0%
! AATATATCCATCTTCAATCT+TGG + chr6_2:35742967-35742986 Msa0916290:intron 25.0%
!!! CAATCAAAATGATTTTTAGG+TGG + chr6_2:35743084-35743103 Msa0916290:intron 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG - chr6_2:35743230-35743249 None:intergenic 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG - chr6_2:35743231-35743250 None:intergenic 25.0%
! TTCAATCAAATAACTTCATG+AGG - chr6_2:35743520-35743539 None:intergenic 25.0%
! AAGAAAAATGTATCATCATG+AGG + chr6_2:35743659-35743678 Msa0916290:intron 25.0%
!! GACATATATTAATGATTTGC+TGG + chr6_2:35744598-35744617 Msa0916290:CDS 25.0%
CATCAATCCTAATGAGAAAT+CGG + chr6_2:35740826-35740845 Msa0916290:CDS 30.0%
ATGAAAAGTGATTGAAGAGT+AGG + chr6_2:35740967-35740986 Msa0916290:intron 30.0%
ACGCATAACAAAACCTTAAA+TGG + chr6_2:35740998-35741017 Msa0916290:intron 30.0%
GGAATGAAACTTGATATTCT+AGG + chr6_2:35741045-35741064 Msa0916290:intron 30.0%
!!! ATCAAGTTGACTTTTTCCAA+GGG - chr6_2:35741366-35741385 None:intergenic 30.0%
!!! AATCAAGTTGACTTTTTCCA+AGG - chr6_2:35741367-35741386 None:intergenic 30.0%
! ATTGACTCAATATGTCGTTT+GGG + chr6_2:35741384-35741403 Msa0916290:CDS 30.0%
! CGTAATATTTGACTTTGTCA+TGG + chr6_2:35741691-35741710 Msa0916290:intron 30.0%
!! GTGTTTCTGAAGTACAAAAA+AGG - chr6_2:35741960-35741979 None:intergenic 30.0%
GGTTCATGGTGAAAAAATAT+TGG + chr6_2:35742250-35742269 Msa0916290:CDS 30.0%
TGGTGAAAAAATATTGGAAG+AGG + chr6_2:35742256-35742275 Msa0916290:CDS 30.0%
AAAAATATTGGAAGAGGCTT+TGG + chr6_2:35742262-35742281 Msa0916290:CDS 30.0%
!!! AGTAGTTGAATGTTGCTTTT+GGG + chr6_2:35742676-35742695 Msa0916290:CDS 30.0%
TTTCCTTGCTTGAGAATATT+GGG - chr6_2:35742723-35742742 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG - chr6_2:35742724-35742743 None:intergenic 30.0%
! GTTGCTTTATAAATCACTCT+TGG + chr6_2:35743145-35743164 Msa0916290:CDS 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG - chr6_2:35743229-35743248 None:intergenic 30.0%
TGGTTATCAAATGGAAGTTT+AGG + chr6_2:35743363-35743382 Msa0916290:intron 30.0%
! AAAGTATCACCATAATCACT+AGG + chr6_2:35743479-35743498 Msa0916290:intron 30.0%
! TCATGAGGATACATTTTTCT+TGG - chr6_2:35743505-35743524 None:intergenic 30.0%
TGCAAAAAACTTATTGTCCA+TGG + chr6_2:35743738-35743757 Msa0916290:intron 30.0%
AAACTGAGTTCATATAACCA+TGG - chr6_2:35743758-35743777 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG + chr6_2:35744036-35744055 Msa0916290:CDS 30.0%
CACATATCAACAATATCAAG+TGG + chr6_2:35744067-35744086 Msa0916290:CDS 30.0%
GACAAAAGACATCTTTGATT+GGG + chr6_2:35744138-35744157 Msa0916290:CDS 30.0%
GTACTTGGAATGTTATATGA+GGG + chr6_2:35744376-35744395 Msa0916290:CDS 30.0%
TGAGGGAATATGATATGAAT+AGG + chr6_2:35744393-35744412 Msa0916290:CDS 30.0%
GAGGGAATATGATATGAATA+GGG + chr6_2:35744394-35744413 Msa0916290:CDS 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG - chr6_2:35744426-35744445 None:intergenic 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG - chr6_2:35744439-35744458 None:intergenic 30.0%
AAAAGAAAATTGACAACGCT+TGG + chr6_2:35744438-35744457 Msa0916290:CDS 30.0%
! TGCAAAACCGATTTCTCATT+AGG - chr6_2:35740836-35740855 None:intergenic 35.0%
TCCTTATGCTTCAGAATCTA+TGG + chr6_2:35740904-35740923 Msa0916290:CDS 35.0%
!! ACCATAGATTCTGAAGCATA+AGG - chr6_2:35740908-35740927 None:intergenic 35.0%
AATCCTGGGCTAATATTAAG+TGG - chr6_2:35741110-35741129 None:intergenic 35.0%
ATGAGAGTAACTTGAATCCT+GGG - chr6_2:35741124-35741143 None:intergenic 35.0%
AATGAGAGTAACTTGAATCC+TGG - chr6_2:35741125-35741144 None:intergenic 35.0%
! TTTTGCTAAATGCAGTCCAT+AGG + chr6_2:35741192-35741211 Msa0916290:intron 35.0%
TTGTTGTATGGATCAACCTA+TGG - chr6_2:35741211-35741230 None:intergenic 35.0%
TTTGCGGCAATATTCATATC+AGG - chr6_2:35741288-35741307 None:intergenic 35.0%
! GATTGACTCAATATGTCGTT+TGG + chr6_2:35741383-35741402 Msa0916290:CDS 35.0%
!! ATTCACTTGCTGTGCTATTT+AGG + chr6_2:35741505-35741524 Msa0916290:CDS 35.0%
!! TTCACTTGCTGTGCTATTTA+GGG + chr6_2:35741506-35741525 Msa0916290:CDS 35.0%
AGATGTGTTCAACCAATTCA+AGG + chr6_2:35742148-35742167 Msa0916290:intron 35.0%
AGGAAACTTCAGTGAAACAT+TGG + chr6_2:35742178-35742197 Msa0916290:CDS 35.0%
TTTACTTGTGTTGCAAGAGA+AGG - chr6_2:35742332-35742351 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG + chr6_2:35742448-35742467 Msa0916290:intron 35.0%
! TTCCAAATTCCTTTTGATGC+AGG - chr6_2:35742493-35742512 None:intergenic 35.0%
TTGTCTTTATATACAGGTGG+TGG + chr6_2:35742609-35742628 Msa0916290:intron 35.0%
!!! GAGTAGTTGAATGTTGCTTT+TGG + chr6_2:35742675-35742694 Msa0916290:CDS 35.0%
ATATTGGGGCTCAAAACATA+CGG - chr6_2:35742708-35742727 None:intergenic 35.0%
TTCCTTGCTTGAGAATATTG+GGG - chr6_2:35742722-35742741 None:intergenic 35.0%
TAGGTGGGATATTAATTGCA+TGG + chr6_2:35743100-35743119 Msa0916290:intron 35.0%
TAAAGCAACTTCATGTAACC+CGG - chr6_2:35743134-35743153 None:intergenic 35.0%
GAGCAAGAAATGAAGAAAGA+AGG + chr6_2:35743185-35743204 Msa0916290:CDS 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG - chr6_2:35743222-35743241 None:intergenic 35.0%
! TTTTCTTGGCCTAGTGATTA+TGG - chr6_2:35743491-35743510 None:intergenic 35.0%
AATCCAAGCTTATATGAGTG+AGG + chr6_2:35743997-35744016 Msa0916290:CDS 35.0%
TACGACTTCTTACATTGGAA+TGG + chr6_2:35744105-35744124 Msa0916290:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG + chr6_2:35744106-35744125 Msa0916290:CDS 35.0%
CGACAAAAGACATCTTTGAT+TGG + chr6_2:35744137-35744156 Msa0916290:CDS 35.0%
! GCAGCAGCATTAACAATTTT+TGG - chr6_2:35744175-35744194 None:intergenic 35.0%
AAACAGTTTGAGCAGAAAAG+AGG + chr6_2:35744341-35744360 Msa0916290:intron 35.0%
CGTACTTGGAATGTTATATG+AGG + chr6_2:35744375-35744394 Msa0916290:CDS 35.0%
CGCTTGGAAAGATATAAATC+AGG + chr6_2:35744454-35744473 Msa0916290:CDS 35.0%
AAAAATCTCCCCAAACGCTA+GGG - chr6_2:35740880-35740899 None:intergenic 40.0%
AAAAAATCTCCCCAAACGCT+AGG - chr6_2:35740881-35740900 None:intergenic 40.0%
CTGGGCTAATATTAAGTGGT+TGG - chr6_2:35741106-35741125 None:intergenic 40.0%
CAACCACTTAATATTAGCCC+AGG + chr6_2:35741104-35741123 Msa0916290:intron 40.0%
CTCAAAAACACAGAAACCCT+TGG + chr6_2:35741347-35741366 Msa0916290:CDS 40.0%
ATAGCACAGCAAGTGAATGA+AGG - chr6_2:35741503-35741522 None:intergenic 40.0%
AACATTGGTCGTAGATGTTG+AGG + chr6_2:35742193-35742212 Msa0916290:CDS 40.0%
ACATTGGTCGTAGATGTTGA+GGG + chr6_2:35742194-35742213 Msa0916290:CDS 40.0%
GTATGAAGCCTCACATATGA+TGG + chr6_2:35742229-35742248 Msa0916290:CDS 40.0%
ACCATGAACCATCATATGTG+AGG - chr6_2:35742240-35742259 None:intergenic 40.0%
TTGCAAGAGAAGGACTCAAT+CGG - chr6_2:35742322-35742341 None:intergenic 40.0%
GGATGAATCTTGCTCATAGA+TGG - chr6_2:35742417-35742436 None:intergenic 40.0%
AGCCTGCATCAAAAGGAATT+TGG + chr6_2:35742488-35742507 Msa0916290:intron 40.0%
!! CTTTATATACAGGTGGTGGA+AGG + chr6_2:35742613-35742632 Msa0916290:intron 40.0%
ACTACTCTATCTCGTGCATA+CGG - chr6_2:35742662-35742681 None:intergenic 40.0%
GATGACACATACGATGCATA+TGG + chr6_2:35742779-35742798 Msa0916290:CDS 40.0%
TTAGCGACCAAGATTGAAGA+TGG - chr6_2:35742977-35742996 None:intergenic 40.0%
GTGGGATATTAATTGCATGG+AGG + chr6_2:35743103-35743122 Msa0916290:CDS 40.0%
TAATTGCATGGAGGATCTTC+CGG + chr6_2:35743112-35743131 Msa0916290:CDS 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG - chr6_2:35743223-35743242 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG - chr6_2:35744023-35744042 None:intergenic 40.0%
TTGGCTACGACTTCTTACAT+TGG + chr6_2:35744100-35744119 Msa0916290:CDS 40.0%
TGCTATACATTGCAGGCTTA+GGG + chr6_2:35744192-35744211 Msa0916290:CDS 40.0%
AGGACATGTTTCTTCGTACT+TGG + chr6_2:35744361-35744380 Msa0916290:CDS 40.0%
!! ATAGGTAACGGAACTTCAGT+TGG - chr6_2:35744491-35744510 None:intergenic 40.0%
ACACACGTCAGAATAGGTAA+CGG - chr6_2:35744503-35744522 None:intergenic 40.0%
TTGAGAACACACGTCAGAAT+AGG - chr6_2:35744509-35744528 None:intergenic 40.0%
!! CAATCTCTCGCGTTTTATTG+AGG + chr6_2:35744526-35744545 Msa0916290:CDS 40.0%
GATAACTACACACACTCTGA+CGG + chr6_2:35744566-35744585 Msa0916290:CDS 40.0%
AGATTTCCACCCTAGCGTTT+GGG + chr6_2:35740868-35740887 Msa0916290:CDS 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG + chr6_2:35741514-35741533 Msa0916290:CDS 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG + chr6_2:35741522-35741541 Msa0916290:CDS 45.0%
CATGGACTTTACGTTTCACC+TGG + chr6_2:35741540-35741559 Msa0916290:CDS 45.0%
AACCAATTCAAGGACGAGCA+AGG + chr6_2:35742158-35742177 Msa0916290:CDS 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG - chr6_2:35742163-35742182 None:intergenic 45.0%
GCCTCACATATGATGGTTCA+TGG + chr6_2:35742236-35742255 Msa0916290:CDS 45.0%
!!! GAGGCTTTGGCTTTTACTTC+TGG + chr6_2:35742275-35742294 Msa0916290:CDS 45.0%
TGCAAGAGAAGGACTCAATC+GGG - chr6_2:35742321-35742340 None:intergenic 45.0%
! CTAGCCTAGGCAAGTTTTTG+CGG - chr6_2:35742376-35742395 None:intergenic 45.0%
CAAAAACTTGCCTAGGCTAG+TGG + chr6_2:35742376-35742395 Msa0916290:intron 45.0%
! TAACTTCTTGCCACTAGCCT+AGG - chr6_2:35742389-35742408 None:intergenic 45.0%
!! GCTCTAAAGCCTGCATCAAA+AGG + chr6_2:35742481-35742500 Msa0916290:intron 45.0%
AGCCCCAATATTCTCAAGCA+AGG + chr6_2:35742717-35742736 Msa0916290:CDS 45.0%
AATTGCATGGAGGATCTTCC+GGG + chr6_2:35743113-35743132 Msa0916290:CDS 45.0%
TGGCCTCACTCATATAAGCT+TGG - chr6_2:35744003-35744022 None:intergenic 45.0%
CTTATATGAGTGAGGCCAGA+TGG + chr6_2:35744005-35744024 Msa0916290:CDS 45.0%
TGCATGTACTCCTCTGTTGT+TGG - chr6_2:35744049-35744068 None:intergenic 45.0%
ATCAAGTGGTTACCCAGTGT+TGG + chr6_2:35744081-35744100 Msa0916290:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG - chr6_2:35744096-35744115 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG - chr6_2:35744097-35744116 None:intergenic 45.0%
ATGCTGCTGCTATACATTGC+AGG + chr6_2:35744185-35744204 Msa0916290:CDS 45.0%
CTGCTATACATTGCAGGCTT+AGG + chr6_2:35744191-35744210 Msa0916290:CDS 45.0%
GGATGAAATTGTGTCAAGCG+AGG + chr6_2:35744213-35744232 Msa0916290:CDS 45.0%
!!! ATTTTATAATAATAAAAGAT+AGG + chr6_2:35741768-35741787 Msa0916290:intron 5.0%
CAGATTTCCACCCTAGCGTT+TGG + chr6_2:35740867-35740886 Msa0916290:CDS 50.0%
GATTTCCACCCTAGCGTTTG+GGG + chr6_2:35740869-35740888 Msa0916290:CDS 50.0%
TTCTGGTCACCTTGAGTCGA+TGG + chr6_2:35742292-35742311 Msa0916290:CDS 50.0%
AAGAGAAGGACTCAATCGGG+TGG - chr6_2:35742318-35742337 None:intergenic 50.0%
CTCTCCGCAAAAACTTGCCT+AGG + chr6_2:35742369-35742388 Msa0916290:intron 50.0%
!! ATACAGGTGGTGGAAGGAGT+TGG + chr6_2:35742619-35742638 Msa0916290:intron 50.0%
AATCTCCCCAAACGCTAGGG+TGG - chr6_2:35740877-35740896 None:intergenic 55.0%
!! ATCGGGTGGCCATCGACTCA+AGG - chr6_2:35742304-35742323 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 35740809 35744640 35740809 ID=Msa0916290;Name=Msa0916290
chr6_2 mRNA 35740809 35744640 35740809 ID=Msa0916290-mRNA-1;Parent=Msa0916290;Name=Msa0916290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|8|0|504
chr6_2 exon 35740809 35740925 35740809 ID=Msa0916290-mRNA-1:exon:6249;Parent=Msa0916290-mRNA-1
chr6_2 exon 35741282 35741561 35741282 ID=Msa0916290-mRNA-1:exon:6250;Parent=Msa0916290-mRNA-1
chr6_2 exon 35742150 35742346 35742150 ID=Msa0916290-mRNA-1:exon:6251;Parent=Msa0916290-mRNA-1
chr6_2 exon 35742503 35742522 35742503 ID=Msa0916290-mRNA-1:exon:6252;Parent=Msa0916290-mRNA-1
chr6_2 exon 35742625 35742843 35742625 ID=Msa0916290-mRNA-1:exon:6253;Parent=Msa0916290-mRNA-1
chr6_2 exon 35743103 35743241 35743103 ID=Msa0916290-mRNA-1:exon:6254;Parent=Msa0916290-mRNA-1
chr6_2 exon 35743986 35744234 35743986 ID=Msa0916290-mRNA-1:exon:6255;Parent=Msa0916290-mRNA-1
chr6_2 exon 35744347 35744640 35744347 ID=Msa0916290-mRNA-1:exon:6256;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35740809 35740925 35740809 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35741282 35741561 35741282 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35742150 35742346 35742150 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35742503 35742522 35742503 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35742625 35742843 35742625 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35743103 35743241 35743103 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35743986 35744234 35743986 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
chr6_2 CDS 35744347 35744640 35744347 ID=Msa0916290-mRNA-1:cds;Parent=Msa0916290-mRNA-1
Gene Sequence

>Msa0916290

ATGTCTTCAGTAGATTACATCAATCCTAATGAGAAATCGGTTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTTTGGGGAGATTTTTTCATTCCTTATGCTTCAGAATCTATGGAACCTGATATGAATATTGCCGCAAAAATTGATAAACTAAAAAAGGAGGTTAGACAAATGCTTGTCTCAAAAACACAGAAACCCTTGGAAAAAGTCAACTTGATTGACTCAATATGTCGTTTGGGTGTGAGCTATCATTTTGAAGACGAAATTAATCAAGTTTTGGAACATATTTACAAGAGTTATGTTCAAAATGGAGAAATAACTCTCAAAGACAACCTTCATTCACTTGCTGTGCTATTTAGGGTGTTGAGGCAACATGGACTTTACGTTTCACCTGATGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAACATTGGTCGTAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGATGGTTCATGGTGAAAAAATATTGGAAGAGGCTTTGGCTTTTACTTCTGGTCACCTTGAGTCGATGGCCACCCGATTGAGTCCTTCTCTTGCAACACAAGAATTTGGAAACATTAGCAAGTGGTGGAAGGAGTTGGATATTGCTCAAAAACTACCGTATGCACGAGATAGAGTAGTTGAATGTTGCTTTTGGGTTATGACCGTATGTTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATACGATGCATATGGAACTATTGATGAATTAGAACTTTTTACTAAGGCAATTGAAAGGTGGGATATTAATTGCATGGAGGATCTTCCGGGTTACATGAAGTTGCTTTATAAATCACTCTTGGATGTTTATGAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGATTGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGCGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTGGAATGTTATATGAGGGAATATGATATGAATAGGGAAGCTTCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAGGAATGTCTTAAGCCAACTGAAGTTCCGTTACCTATTCTGACGTGTGTTCTCAATCTCTCGCGTTTTATTGAGGTTTTTTACAAAGATACAGATAACTACACACACTCTGACGGACTAATGAAGACATATATTAATGATTTGCTGGTCAATCCTTTAGAAATTTGA
Protein sequence

>Msa0916290

MSSVDYINPNEKSVLQRNVADFHPSVWGDFFIPYASESMEPDMNIAAKIDKLKKEVRQMLVSKTQKPLEKVNLIDSICRLGVSYHFEDEINQVLEHIYKSYVQNGEITLKDNLHSLAVLFRVLRQHGLYVSPDVFNQFKDEQGNFSETLVVDVEGMLNLYEASHMMVHGEKILEEALAFTSGHLESMATRLSPSLATQEFGNISKWWKELDIAQKLPYARDRVVECCFWVMTVCFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTKAIERWDINCMEDLPGYMKLLYKSLLDVYEEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDWVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDMNREASIQECQKKIDNAWKDINQECLKPTEVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPLEI*