AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007820 MtrunA17_Chr7g0218081 97.137 524 12 2 1 524 1 521 0.0 1040
Msa1007820 MtrunA17_Chr5g0418191 49.027 514 156 13 14 522 20 432 7.43e-140 410
Msa1007820 MtrunA17_Chr4g0042831 40.845 497 162 15 36 522 14 388 9.91e-97 298
Msa1007820 MtrunA17_Chr7g0249311 50.662 302 114 7 226 494 176 475 4.68e-87 282
Msa1007820 MtrunA17_Chr5g0445311 40.222 450 211 9 96 506 29 459 1.56e-86 277
Msa1007820 MtrunA17_Chr3g0101131 48.693 306 131 5 209 506 223 510 2.80e-86 278
Msa1007820 MtrunA17_Chr3g0079691 50.000 304 112 8 227 493 278 578 3.27e-84 275
Msa1007820 MtrunA17_Chr3g0106491 41.814 397 182 10 109 479 60 433 1.13e-80 260
Msa1007820 MtrunA17_Chr7g0263531 49.466 281 117 5 214 487 174 436 3.94e-80 257
Msa1007820 MtrunA17_Chr7g0243891 51.481 270 87 5 226 485 213 448 4.00e-78 255
Msa1007820 MtrunA17_Chr5g0432161 41.463 410 184 12 112 475 86 485 1.07e-77 254
Msa1007820 MtrunA17_Chr4g0004911 40.897 379 174 11 114 473 51 398 1.92e-72 238
Msa1007820 MtrunA17_Chr7g0249301 45.215 303 104 8 226 473 59 354 7.76e-71 231
Msa1007820 MtrunA17_Chr7g0249301 51.282 78 30 2 410 487 61 130 6.54e-15 76.6
Msa1007820 MtrunA17_Chr4g0074001 40.945 254 127 5 227 473 184 421 4.55e-49 177
Msa1007820 MtrunA17_Chr1g0188941 60.714 84 33 0 387 470 27 110 1.32e-31 117
Msa1007820 MtrunA17_Chr1g0188941 56.452 62 22 2 229 287 51 110 8.60e-16 73.6
Msa1007820 MtrunA17_Chr7g0270191 60.215 93 37 0 390 482 124 216 1.21e-30 120
Msa1007820 MtrunA17_Chr7g0270191 45.745 94 35 2 199 291 130 208 1.70e-16 80.1
Msa1007820 MtrunA17_Chr8g0335811 63.636 77 28 0 391 467 134 210 2.23e-30 118
Msa1007820 MtrunA17_Chr8g0335811 63.158 57 20 1 229 284 154 210 9.98e-18 82.4
Msa1007820 MtrunA17_Chr1g0194481 61.728 81 31 0 396 476 143 223 2.19e-29 118
Msa1007820 MtrunA17_Chr1g0194481 45.745 94 35 2 199 291 143 221 1.28e-16 81.3
Msa1007820 MtrunA17_Chr3g0129361 63.514 74 27 0 394 467 127 200 8.12e-29 114
Msa1007820 MtrunA17_Chr3g0129361 59.649 57 22 1 229 284 144 200 7.12e-16 77.0
Msa1007820 MtrunA17_Chr4g0051881 63.158 76 28 0 397 472 164 239 2.62e-28 115
Msa1007820 MtrunA17_Chr4g0051881 59.375 64 25 1 229 291 178 241 4.53e-16 79.7
Msa1007820 MtrunA17_Chr2g0294231 63.636 77 28 0 396 472 188 264 7.36e-28 115
Msa1007820 MtrunA17_Chr2g0294231 46.809 94 34 2 199 291 188 266 2.95e-17 83.6
Msa1007820 MtrunA17_Chr5g0418781 49.107 112 53 2 391 498 104 215 1.11e-27 112
Msa1007820 MtrunA17_Chr5g0418781 41.463 123 47 5 163 284 82 180 2.31e-15 76.6
Msa1007820 MtrunA17_Chr7g0224801 68.182 66 21 0 402 467 84 149 1.13e-27 108
Msa1007820 MtrunA17_Chr7g0224801 56.140 57 24 1 229 284 93 149 1.40e-15 74.7
Msa1007820 MtrunA17_Chr5g0443131 61.842 76 29 0 397 472 143 218 1.32e-27 112
Msa1007820 MtrunA17_Chr5g0443131 59.375 64 25 1 229 291 157 220 2.77e-16 79.7
Msa1007820 MtrunA17_Chr8g0383251 56.962 79 34 0 398 476 95 173 3.00e-27 108
Msa1007820 MtrunA17_Chr8g0383251 56.667 60 25 1 229 287 108 167 8.83e-14 70.1
Msa1007820 MtrunA17_Chr8g0383351 62.667 75 27 1 394 467 142 216 3.07e-27 109
Msa1007820 MtrunA17_Chr8g0383351 59.649 57 22 1 229 284 160 216 3.62e-16 78.2
Msa1007820 MtrunA17_Chr5g0447701 57.647 85 36 0 396 480 237 321 4.04e-27 113
Msa1007820 MtrunA17_Chr5g0447701 45.263 95 44 4 375 467 59 147 1.02e-12 69.7
Msa1007820 MtrunA17_Chr8g0386241 53.571 84 39 0 392 475 84 167 1.07e-26 106
Msa1007820 MtrunA17_Chr8g0386241 52.632 57 26 1 229 284 103 159 4.55e-15 73.6
Msa1007820 MtrunA17_Chr7g0248721 59.740 77 30 1 391 467 121 196 9.24e-25 102
Msa1007820 MtrunA17_Chr7g0248721 58.065 62 24 2 224 284 136 196 3.49e-16 77.8
Msa1007820 MtrunA17_Chr1g0150801 54.545 77 34 1 391 467 83 158 2.99e-24 99.4
Msa1007820 MtrunA17_Chr1g0150801 36.207 116 67 3 174 284 45 158 1.27e-13 68.9
Msa1007820 MtrunA17_Chr3g0129321 52.000 75 36 0 397 471 104 178 4.39e-24 100
Msa1007820 MtrunA17_Chr3g0129321 58.333 60 24 1 229 287 118 177 3.66e-15 74.3
Msa1007820 MtrunA17_Chr7g0270831 52.222 90 41 2 398 485 203 292 6.12e-24 104
Msa1007820 MtrunA17_Chr7g0270831 47.887 71 35 2 230 298 217 287 5.61e-13 70.9
Msa1007820 MtrunA17_Chr2g0288871 31.818 242 141 7 240 470 137 365 6.35e-24 105
Msa1007820 MtrunA17_Chr4g0068541 47.000 100 51 1 398 497 195 292 2.08e-23 102
Msa1007820 MtrunA17_Chr4g0068541 60.000 60 23 1 229 287 208 267 6.59e-16 80.1
Msa1007820 MtrunA17_Chr1g0189391 52.273 88 40 2 398 484 84 170 2.42e-23 101
Msa1007820 MtrunA17_Chr1g0189391 53.448 58 25 2 229 284 97 154 8.70e-12 66.6
Msa1007820 MtrunA17_Chr3g0099641 39.516 124 65 3 372 485 204 327 3.18e-23 102
Msa1007820 MtrunA17_Chr3g0099641 53.333 60 26 2 230 287 252 311 3.34e-13 71.6
Msa1007820 MtrunA17_Chr2g0322391 47.525 101 51 2 387 485 325 425 4.36e-23 103
Msa1007820 MtrunA17_Chr4g0025061 46.392 97 51 1 387 482 336 432 5.31e-23 102
Msa1007820 MtrunA17_Chr4g0025061 29.530 149 96 3 152 298 290 431 2.79e-11 66.2
Msa1007820 MtrunA17_Chr6g0485431 45.833 96 51 1 376 470 119 214 9.03e-23 99.8
Msa1007820 MtrunA17_Chr6g0485431 44.776 67 35 2 228 292 153 219 2.30e-12 68.6
Msa1007820 MtrunA17_Chr4g0075201 51.190 84 40 1 390 472 246 329 1.26e-22 101
Msa1007820 MtrunA17_Chr4g0075201 52.459 61 27 2 229 287 267 327 1.33e-12 70.1
Msa1007820 MtrunA17_Chr5g0432071 61.429 70 25 1 229 298 104 171 1.41e-21 93.2
Msa1007820 MtrunA17_Chr5g0432071 43.434 99 45 4 411 506 104 194 4.56e-15 74.3
Msa1007820 MtrunA17_Chr4g0060271 45.918 98 48 2 374 470 222 315 1.84e-21 98.2
Msa1007820 MtrunA17_Chr4g0060271 49.254 67 31 3 224 287 249 315 1.52e-11 67.0
Msa1007820 MtrunA17_Chr4g0051181 51.163 86 37 2 388 472 224 305 1.90e-21 97.4
Msa1007820 MtrunA17_Chr4g0051181 50.820 61 28 2 229 287 243 303 3.85e-11 65.5
Msa1007820 MtrunA17_Chr4g0025051 42.241 116 56 2 378 482 292 407 2.88e-21 97.4
Msa1007820 MtrunA17_Chr1g0147881 53.012 83 35 2 391 472 245 324 1.31e-20 93.2
Msa1007820 MtrunA17_Chr1g0147881 47.059 85 39 4 220 302 254 334 1.23e-13 72.4
Msa1007820 MtrunA17_Chr4g0053281 51.807 83 36 2 391 472 249 328 2.53e-20 92.4
Msa1007820 MtrunA17_Chr4g0053281 51.471 68 30 3 225 290 263 329 4.43e-14 73.6
Msa1007820 MtrunA17_Chr5g0401821 61.905 63 23 1 408 469 196 258 4.82e-20 90.1
Msa1007820 MtrunA17_Chr5g0401821 53.226 62 26 3 225 284 196 256 3.64e-13 70.1
Msa1007820 MtrunA17_Chr2g0302391 47.674 86 44 1 398 482 198 283 6.65e-20 92.4
Msa1007820 MtrunA17_Chr2g0302391 48.387 62 30 2 230 289 212 273 1.29e-11 66.6
Msa1007820 MtrunA17_Chr7g0216891 43.011 93 48 2 376 467 188 276 2.04e-19 91.7
Msa1007820 MtrunA17_Chr7g0216891 43.023 86 46 3 202 284 191 276 2.70e-11 66.2
Msa1007820 MtrunA17_Chr7g0238921 61.017 59 23 0 409 467 122 180 2.12e-19 89.4
Msa1007820 MtrunA17_Chr7g0238921 39.344 122 58 6 170 284 68 180 9.64e-14 72.4
Msa1007820 MtrunA17_Chr2g0333851 44.828 87 47 1 409 494 167 253 4.81e-19 88.2
Msa1007820 MtrunA17_Chr2g0333851 48.333 60 29 2 230 287 170 229 3.83e-11 64.3
Msa1007820 MtrunA17_Chr8g0348311 42.202 109 59 3 388 495 133 238 4.87e-19 88.6
Msa1007820 MtrunA17_Chr5g0447711 40.000 90 54 0 396 485 215 304 5.63e-19 87.8
Msa1007820 MtrunA17_Chr5g0447711 48.333 60 31 0 230 289 84 143 5.15e-13 70.1
Msa1007820 MtrunA17_Chr5g0447711 42.667 75 40 2 228 301 229 301 6.64e-11 63.5
Msa1007820 MtrunA17_Chr4g0024391 40.000 100 59 1 384 482 202 301 6.51e-19 89.7
Msa1007820 MtrunA17_Chr3g0136961 54.795 73 30 3 398 467 123 195 7.45e-19 87.0
Msa1007820 MtrunA17_Chr3g0136961 40.659 91 51 3 230 317 139 229 5.61e-13 69.7
Msa1007820 MtrunA17_Chr2g0293481 47.778 90 36 2 412 490 268 357 1.07e-18 89.0
Msa1007820 MtrunA17_Chr2g0284321 43.750 112 44 4 376 481 11 109 1.50e-18 84.7
Msa1007820 MtrunA17_Chr2g0284321 37.288 118 56 5 225 324 31 148 1.26e-13 70.1
Msa1007820 MtrunA17_Chr7g0270051 52.857 70 32 1 412 480 54 123 1.99e-18 85.5
Msa1007820 MtrunA17_Chr7g0270051 51.613 62 28 2 230 289 54 115 2.79e-12 67.0
Msa1007820 MtrunA17_Chr8g0387501 48.052 77 39 1 410 485 128 204 3.34e-18 84.7
Msa1007820 MtrunA17_Chr8g0387501 46.479 71 34 3 224 292 124 192 2.60e-11 64.3
Msa1007820 MtrunA17_Chr4g0071521 59.016 61 24 1 408 467 242 302 4.26e-18 85.5
Msa1007820 MtrunA17_Chr4g0071521 50.746 67 30 3 220 284 237 302 5.50e-13 70.1
Msa1007820 MtrunA17_Chr1g0184691 60.656 61 23 1 408 467 290 350 4.63e-18 85.9
Msa1007820 MtrunA17_Chr1g0184691 53.125 64 27 3 225 286 290 352 4.04e-13 70.9
Msa1007820 MtrunA17_Chr7g0248691 47.191 89 45 2 388 475 132 219 9.02e-18 84.7
Msa1007820 MtrunA17_Chr6g0468181 58.462 65 27 0 245 309 18 82 1.26e-17 79.0
Msa1007820 MtrunA17_Chr1g0202461 43.956 91 50 1 386 475 236 326 2.05e-17 84.3
Msa1007820 MtrunA17_Chr1g0202461 44.615 65 34 2 225 287 257 321 8.18e-12 67.0
Msa1007820 MtrunA17_Chr8g0379461 50.000 66 32 1 412 476 77 142 2.40e-17 81.6
Msa1007820 MtrunA17_Chr8g0379461 33.051 118 61 4 227 331 74 186 3.81e-12 66.2
Msa1007820 MtrunA17_Chr1g0150281 47.945 73 35 2 398 467 125 197 3.92e-17 82.0
Msa1007820 MtrunA17_Chr1g0150281 49.123 57 27 2 230 284 141 197 3.44e-11 64.3
Msa1007820 MtrunA17_Chr7g0228941 54.098 61 27 1 408 467 49 109 1.71e-16 75.9
Msa1007820 MtrunA17_Chr7g0228941 48.529 68 32 3 220 285 44 110 1.98e-13 67.4
Msa1007820 MtrunA17_Chr4g0001361 50.000 70 30 2 403 467 150 219 3.30e-16 79.7
Msa1007820 MtrunA17_Chr4g0001361 50.000 60 28 2 230 287 163 222 3.36e-12 67.8
Msa1007820 MtrunA17_Chr2g0319961 42.105 95 49 3 391 481 57 149 3.65e-16 78.6
Msa1007820 MtrunA17_Chr2g0289181 50.000 74 36 1 400 472 3 76 3.91e-16 77.8
Msa1007820 MtrunA17_Chr2g0289181 50.704 71 33 2 225 293 10 80 2.81e-15 75.5
Msa1007820 MtrunA17_Chr1g0188961 61.111 54 21 0 431 484 3 56 6.87e-16 72.4
Msa1007820 MtrunA17_Chr3g0126391 36.290 124 60 4 410 522 132 247 1.63e-15 77.8
Msa1007820 MtrunA17_Chr3g0126391 49.231 65 29 2 222 282 126 190 1.08e-14 75.5
Msa1007820 MtrunA17_Chr1g0150271 40.909 88 46 3 386 470 77 161 1.72e-15 76.6
Msa1007820 MtrunA17_Chr3g0139021 53.226 62 28 1 408 468 311 372 3.39e-15 77.8
Msa1007820 MtrunA17_Chr3g0139021 47.826 69 33 3 220 286 306 373 3.65e-12 68.2
Msa1007820 MtrunA17_Chr1g0188971 45.570 79 42 1 354 431 4 82 4.44e-15 70.5
Msa1007820 MtrunA17_Chr8g0387981 44.048 84 39 2 390 465 106 189 9.66e-14 72.8
Msa1007820 MtrunA17_Chr8g0387981 49.206 63 28 2 224 282 127 189 2.18e-13 71.6
Msa1007820 MtrunA17_Chr5g0419241 50.000 50 25 0 390 439 56 105 1.26e-13 67.4
Msa1007820 MtrunA17_Chr4g0009881 47.059 68 35 1 221 288 9 75 2.35e-12 63.9
Msa1007820 MtrunA17_Chr7g0275531 46.154 65 31 2 229 289 118 182 3.42e-12 67.8
Msa1007820 MtrunA17_Chr7g0275531 47.458 59 28 1 410 465 117 175 1.70e-11 65.5
Msa1007820 MtrunA17_Chr8g0347251 47.458 59 27 2 228 282 135 193 3.61e-12 67.8
Msa1007820 MtrunA17_Chr2g0315361 46.667 60 29 1 409 465 146 205 4.01e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007820 AT2G03340.1 52.110 545 192 17 6 522 9 512 1.09e-147 434
Msa1007820 AT1G13960.1 50.185 542 207 17 6 521 8 512 7.39e-144 424
Msa1007820 AT1G13960.2 52.273 396 140 12 138 521 1 359 3.09e-106 322
Msa1007820 AT3G01080.2 41.948 534 196 16 15 524 18 461 1.66e-103 318
Msa1007820 AT3G01080.1 54.605 304 91 8 225 524 163 423 6.45e-90 282
Msa1007820 AT4G26640.5 54.762 252 96 3 228 476 34 270 4.41e-81 258
Msa1007820 AT4G26640.6 54.762 252 96 3 228 476 34 270 4.41e-81 258
Msa1007820 AT4G26640.4 54.762 252 96 3 228 476 34 270 4.41e-81 258
Msa1007820 AT4G26640.3 54.762 252 96 3 228 476 34 270 4.41e-81 258
Msa1007820 AT4G26640.1 54.331 254 98 3 228 478 138 376 1.01e-80 260
Msa1007820 AT4G26440.1 48.936 282 118 4 221 483 170 444 1.14e-80 263
Msa1007820 AT4G26640.7 54.331 254 98 3 228 478 170 408 1.20e-80 261
Msa1007820 AT4G26640.2 54.331 254 98 3 228 478 210 448 3.01e-80 261
Msa1007820 AT2G38470.1 52.128 282 107 6 226 493 181 448 9.48e-80 259
Msa1007820 AT5G07100.1 40.164 366 117 10 112 473 29 296 5.23e-68 221
Msa1007820 AT5G07100.1 40.000 95 46 1 397 480 92 186 7.11e-15 75.9
Msa1007820 AT5G07100.1 57.576 66 23 2 229 291 234 297 1.62e-14 75.1
Msa1007820 AT5G07100.2 47.200 250 65 5 225 473 20 203 7.67e-64 207
Msa1007820 AT5G07100.2 48.571 70 36 0 411 480 24 93 1.45e-14 73.6
Msa1007820 AT5G07100.2 57.576 66 23 2 229 291 141 204 1.77e-14 73.2
Msa1007820 AT5G07100.4 47.200 250 65 5 225 473 20 203 7.67e-64 207
Msa1007820 AT5G07100.4 48.571 70 36 0 411 480 24 93 1.45e-14 73.6
Msa1007820 AT5G07100.4 57.576 66 23 2 229 291 141 204 1.77e-14 73.2
Msa1007820 AT5G07100.5 47.200 250 65 5 225 473 20 203 7.67e-64 207
Msa1007820 AT5G07100.5 48.571 70 36 0 411 480 24 93 1.45e-14 73.6
Msa1007820 AT5G07100.5 57.576 66 23 2 229 291 141 204 1.77e-14 73.2
Msa1007820 AT5G07100.3 47.200 250 65 5 225 473 20 203 7.67e-64 207
Msa1007820 AT5G07100.3 48.571 70 36 0 411 480 24 93 1.45e-14 73.6
Msa1007820 AT5G07100.3 57.576 66 23 2 229 291 141 204 1.77e-14 73.2
Msa1007820 AT2G30250.1 46.850 254 105 5 224 472 161 389 2.52e-61 207
Msa1007820 AT2G37260.3 46.008 263 108 7 225 469 81 327 3.47e-60 202
Msa1007820 AT2G37260.3 48.750 80 36 2 393 472 71 145 7.40e-14 73.6
Msa1007820 AT2G37260.2 46.008 263 108 7 225 469 79 325 5.16e-60 202
Msa1007820 AT2G37260.2 48.750 80 36 2 393 472 69 143 8.42e-14 73.2
Msa1007820 AT2G37260.1 46.008 263 108 7 225 469 161 407 1.33e-59 203
Msa1007820 AT2G37260.1 48.750 80 36 2 393 472 151 225 1.42e-13 73.2
Msa1007820 AT2G04880.2 40.129 309 163 9 175 478 59 350 2.12e-57 198
Msa1007820 AT4G30935.1 42.400 250 115 7 227 471 166 391 9.72e-49 175
Msa1007820 AT4G12020.6 42.810 306 133 14 133 431 391 661 1.54e-48 181
Msa1007820 AT4G12020.6 45.333 75 40 1 410 484 467 540 8.97e-12 68.6
Msa1007820 AT4G12020.8 42.810 306 133 14 133 431 391 661 1.54e-48 181
Msa1007820 AT4G12020.8 45.333 75 40 1 410 484 467 540 8.97e-12 68.6
Msa1007820 AT4G12020.3 42.810 306 133 14 133 431 391 661 1.60e-48 181
Msa1007820 AT4G12020.3 45.333 75 40 1 410 484 467 540 8.31e-12 68.9
Msa1007820 AT4G12020.1 42.810 306 133 14 133 431 391 661 1.63e-48 181
Msa1007820 AT4G12020.1 45.333 75 40 1 410 484 467 540 9.23e-12 68.6
Msa1007820 AT4G12020.9 42.810 306 133 14 133 431 391 661 1.63e-48 181
Msa1007820 AT4G12020.9 45.333 75 40 1 410 484 467 540 9.23e-12 68.6
Msa1007820 AT4G12020.10 42.810 306 133 14 133 431 391 661 1.63e-48 181
Msa1007820 AT4G12020.10 45.333 75 40 1 410 484 467 540 8.23e-12 68.9
Msa1007820 AT4G12020.7 42.810 306 133 14 133 431 391 661 1.77e-48 181
Msa1007820 AT4G12020.7 45.333 75 40 1 410 484 467 540 9.06e-12 68.6
Msa1007820 AT4G12020.2 43.092 304 135 13 133 431 391 661 2.07e-48 181
Msa1007820 AT4G12020.2 45.333 75 40 1 410 484 467 540 8.54e-12 68.9
Msa1007820 AT4G12020.11 42.810 306 133 14 133 431 391 661 2.11e-48 181
Msa1007820 AT4G12020.11 45.333 75 40 1 410 484 467 540 1.33e-11 68.2
Msa1007820 AT4G12020.4 42.810 306 133 14 133 431 391 661 2.17e-48 181
Msa1007820 AT4G12020.4 45.333 75 40 1 410 484 467 540 8.54e-12 68.9
Msa1007820 AT4G12020.5 42.810 306 133 14 133 431 324 594 2.44e-48 181
Msa1007820 AT4G12020.5 45.333 75 40 1 410 484 400 473 9.17e-12 68.6
Msa1007820 AT3G01080.3 36.991 319 131 10 15 311 18 288 4.10e-47 167
Msa1007820 AT3G01080.3 55.556 63 27 1 411 473 205 266 2.04e-15 77.8
Msa1007820 AT5G56270.1 72.449 98 27 0 376 473 452 549 4.49e-43 163
Msa1007820 AT2G04880.1 50.000 116 57 1 373 488 270 384 2.38e-32 130
Msa1007820 AT2G04880.1 44.444 117 59 3 175 289 59 171 2.71e-20 94.4
Msa1007820 AT2G04880.1 50.000 92 34 4 228 310 306 394 2.15e-17 85.5
Msa1007820 AT2G04880.1 51.562 64 30 1 409 472 109 171 8.38e-14 74.3
Msa1007820 AT4G18170.1 41.667 168 87 3 315 471 65 232 3.84e-30 120
Msa1007820 AT4G18170.1 60.000 60 23 1 229 287 172 231 2.74e-15 77.4
Msa1007820 AT2G44745.1 56.383 94 38 2 391 482 125 217 4.55e-30 117
Msa1007820 AT2G44745.1 63.158 57 20 1 229 284 145 201 1.00e-17 82.8
Msa1007820 AT1G29860.1 62.338 77 29 0 396 472 121 197 4.67e-29 116
Msa1007820 AT1G29860.1 47.872 94 33 2 199 291 121 199 3.53e-16 79.3
Msa1007820 AT4G39410.1 62.821 78 29 0 390 467 202 279 4.74e-29 117
Msa1007820 AT4G39410.1 57.895 57 23 1 229 284 223 279 2.95e-14 73.9
Msa1007820 AT1G64000.1 61.039 77 30 0 391 467 94 170 7.64e-29 113
Msa1007820 AT1G64000.1 55.738 61 26 1 225 284 110 170 2.81e-16 77.8
Msa1007820 AT5G13080.1 67.164 67 22 0 401 467 57 123 1.35e-28 111
Msa1007820 AT5G13080.1 54.386 57 25 1 229 284 67 123 8.11e-15 72.0
Msa1007820 AT5G46350.1 45.378 119 53 2 397 509 169 281 1.72e-28 116
Msa1007820 AT5G46350.1 57.576 66 26 2 229 293 183 247 2.98e-15 77.4
Msa1007820 AT5G41570.1 66.197 71 24 0 397 467 84 154 2.13e-28 111
Msa1007820 AT5G41570.1 55.738 61 26 1 225 284 94 154 9.07e-16 75.9
Msa1007820 AT1G69310.4 48.718 117 55 1 351 467 92 203 2.68e-28 114
Msa1007820 AT1G69310.4 58.621 58 23 1 229 285 147 204 1.13e-15 78.2
Msa1007820 AT1G69310.2 48.718 117 55 1 351 467 92 203 2.68e-28 114
Msa1007820 AT1G69310.2 58.621 58 23 1 229 285 147 204 1.13e-15 78.2
Msa1007820 AT1G69310.1 48.718 117 55 1 351 467 92 203 2.68e-28 114
Msa1007820 AT1G69310.1 58.621 58 23 1 229 285 147 204 1.13e-15 78.2
Msa1007820 AT2G47260.1 61.250 80 31 0 391 470 154 233 4.11e-28 115
Msa1007820 AT2G47260.1 45.745 94 35 2 199 291 159 237 3.70e-16 80.1
Msa1007820 AT5G26170.1 62.857 70 26 0 398 467 100 169 1.82e-27 108
Msa1007820 AT5G26170.1 56.140 57 24 1 229 284 113 169 7.60e-15 73.2
Msa1007820 AT3G01970.1 55.952 84 37 0 398 481 52 135 2.73e-27 107
Msa1007820 AT3G01970.1 53.846 65 27 2 229 290 65 129 4.75e-14 70.1
Msa1007820 AT5G49520.1 59.740 77 31 0 396 472 206 282 4.45e-27 113
Msa1007820 AT5G49520.1 59.375 64 25 1 229 291 221 284 6.80e-17 83.2
Msa1007820 AT3G62340.1 48.696 115 56 1 397 511 104 215 2.66e-26 108
Msa1007820 AT3G62340.1 52.500 80 32 3 229 305 118 194 1.52e-14 74.7
Msa1007820 AT1G55600.1 57.831 83 35 0 390 472 286 368 1.92e-25 109
Msa1007820 AT1G55600.1 56.452 62 26 1 229 289 307 368 5.20e-15 77.8
Msa1007820 AT4G04450.2 50.000 104 50 2 384 485 171 274 2.71e-25 108
Msa1007820 AT4G04450.2 53.333 60 26 2 230 287 199 258 7.05e-13 71.2
Msa1007820 AT2G46130.1 56.579 76 33 0 392 467 11 86 2.74e-25 100
Msa1007820 AT2G46130.1 61.404 57 21 1 229 284 30 86 3.22e-17 77.8
Msa1007820 AT5G64810.1 53.846 78 36 0 391 468 90 167 5.05e-25 102
Msa1007820 AT5G64810.1 53.448 58 26 1 229 285 110 167 9.82e-13 67.4
Msa1007820 AT4G04450.1 50.000 104 50 2 384 485 265 368 1.05e-24 108
Msa1007820 AT4G04450.1 53.333 60 26 2 230 287 293 352 1.28e-12 70.5
Msa1007820 AT1G69310.3 46.154 117 54 2 351 467 92 199 1.99e-23 100
Msa1007820 AT1G69310.3 53.448 58 22 2 229 285 147 200 4.02e-11 64.3
Msa1007820 AT1G68150.1 44.762 105 57 1 379 482 203 307 3.87e-23 101
Msa1007820 AT1G68150.1 34.146 123 53 5 190 284 170 292 3.79e-11 65.5
Msa1007820 AT1G62300.1 40.580 138 75 4 339 470 236 372 5.18e-23 103
Msa1007820 AT1G62300.1 53.333 60 26 2 230 287 313 372 2.20e-12 70.1
Msa1007820 AT4G22070.4 52.439 82 38 1 390 470 276 357 9.93e-23 102
Msa1007820 AT4G22070.4 53.333 60 26 2 230 287 298 357 2.70e-12 69.7
Msa1007820 AT4G22070.3 52.439 82 38 1 390 470 276 357 9.93e-23 102
Msa1007820 AT4G22070.3 53.333 60 26 2 230 287 298 357 2.70e-12 69.7
Msa1007820 AT4G22070.2 52.439 82 38 1 390 470 276 357 9.93e-23 102
Msa1007820 AT4G22070.2 53.333 60 26 2 230 287 298 357 2.70e-12 69.7
Msa1007820 AT4G22070.1 52.439 82 38 1 390 470 276 357 9.93e-23 102
Msa1007820 AT4G22070.1 53.333 60 26 2 230 287 298 357 2.70e-12 69.7
Msa1007820 AT2G21900.1 41.346 104 57 2 386 485 80 183 5.60e-22 94.4
Msa1007820 AT2G21900.1 46.250 80 37 3 229 305 109 185 2.22e-13 69.7
Msa1007820 AT5G15130.2 46.237 93 49 1 391 482 165 257 6.14e-22 99.4
Msa1007820 AT5G15130.2 50.820 61 28 2 229 287 185 245 3.15e-11 66.2
Msa1007820 AT5G15130.1 46.237 93 49 1 391 482 207 299 7.22e-22 99.4
Msa1007820 AT5G15130.1 50.820 61 28 2 229 287 227 287 3.63e-11 66.2
Msa1007820 AT2G23320.1 34.783 161 92 2 310 469 151 299 3.22e-21 95.1
Msa1007820 AT2G23320.1 56.452 62 24 3 225 284 237 297 7.39e-14 73.2
Msa1007820 AT1G18860.1 51.852 81 38 1 391 470 219 299 3.76e-21 97.1
Msa1007820 AT4G01720.1 50.000 84 41 1 388 470 216 299 3.31e-20 94.0
Msa1007820 AT4G01720.1 51.613 62 28 2 228 287 238 299 2.23e-12 69.7
Msa1007820 AT4G23550.1 35.938 128 81 1 363 489 92 219 4.08e-20 91.7
Msa1007820 AT4G23550.1 51.667 60 27 2 230 287 141 200 1.29e-11 66.2
Msa1007820 AT4G31550.2 54.430 79 32 2 391 468 228 303 1.90e-19 89.7
Msa1007820 AT4G31550.2 54.237 59 25 2 230 286 246 304 2.18e-12 68.6
Msa1007820 AT4G31550.1 54.430 79 32 2 391 468 229 304 1.98e-19 89.7
Msa1007820 AT4G31550.1 54.237 59 25 2 230 286 247 305 2.20e-12 68.6
Msa1007820 AT4G24240.1 45.000 100 42 2 371 469 253 340 5.73e-19 89.0
Msa1007820 AT4G24240.1 52.239 67 29 3 220 284 273 338 1.12e-13 72.8
Msa1007820 AT2G46130.2 52.632 76 32 1 392 467 11 82 5.85e-19 82.8
Msa1007820 AT2G46130.2 56.140 57 20 2 229 284 30 82 1.66e-11 61.6
Msa1007820 AT5G52830.1 42.574 101 57 1 390 489 144 244 1.05e-18 88.2
Msa1007820 AT4G01250.1 57.353 68 28 1 409 475 126 193 2.19e-18 86.3
Msa1007820 AT5G28650.1 54.930 71 31 1 408 477 259 329 2.42e-18 86.7
Msa1007820 AT5G28650.1 49.254 67 29 3 225 286 255 321 8.88e-12 67.0
Msa1007820 AT3G04670.1 54.930 71 31 1 408 477 259 329 4.51e-18 85.9
Msa1007820 AT3G04670.1 50.746 67 28 3 225 286 255 321 2.65e-12 68.6
Msa1007820 AT1G80840.1 48.571 70 35 1 409 477 144 213 6.14e-18 85.1
Msa1007820 AT2G24570.1 52.564 78 33 2 391 467 226 300 8.11e-18 85.1
Msa1007820 AT2G24570.1 47.945 73 36 2 230 300 244 316 4.98e-13 70.5
Msa1007820 AT2G25000.2 51.562 64 30 1 410 472 102 165 9.32e-18 82.8
Msa1007820 AT2G25000.2 47.826 69 32 3 230 294 104 172 8.33e-11 62.8
Msa1007820 AT2G25000.4 51.562 64 30 1 410 472 102 165 9.32e-18 82.8
Msa1007820 AT2G25000.4 47.826 69 32 3 230 294 104 172 8.33e-11 62.8
Msa1007820 AT2G30590.1 60.656 61 23 1 408 467 310 370 1.29e-17 85.1
Msa1007820 AT2G30590.1 53.125 64 27 3 225 286 310 372 1.00e-12 70.1
Msa1007820 AT5G43290.1 57.627 59 25 0 409 467 112 170 1.51e-17 83.2
Msa1007820 AT5G43290.1 35.915 142 77 3 228 355 113 254 6.07e-15 75.5
Msa1007820 AT2G34830.1 53.846 65 29 1 412 475 216 280 1.54e-17 85.5
Msa1007820 AT2G34830.2 53.846 65 29 1 412 475 225 289 1.65e-17 85.5
Msa1007820 AT2G25000.3 51.562 64 30 1 410 472 124 187 1.76e-17 82.8
Msa1007820 AT3G58710.2 42.105 114 56 4 372 481 36 143 2.06e-17 82.8
Msa1007820 AT2G25000.1 51.562 64 30 1 410 472 145 208 2.49e-17 82.8
Msa1007820 AT3G58710.1 41.739 115 56 4 372 481 36 144 2.53e-17 82.8
Msa1007820 AT4G31800.2 51.562 64 30 1 410 472 110 173 3.24e-17 81.6
Msa1007820 AT4G31800.2 48.387 62 30 2 230 289 112 173 1.05e-11 65.5
Msa1007820 AT1G30650.1 53.846 65 29 1 412 475 218 282 4.88e-17 84.0
Msa1007820 AT4G31800.1 53.226 62 28 1 412 472 177 238 5.27e-17 82.4
Msa1007820 AT4G31800.1 48.387 62 30 2 230 289 177 238 1.55e-11 65.9
Msa1007820 AT1G29280.1 42.574 101 47 3 373 470 42 134 1.68e-16 80.1
Msa1007820 AT1G29280.1 49.206 63 30 2 227 287 72 134 2.67e-12 67.4
Msa1007820 AT5G45050.4 53.846 65 29 1 412 475 1042 1106 4.03e-16 82.4
Msa1007820 AT5G45050.1 53.846 65 29 1 412 475 1181 1245 4.09e-16 82.4
Msa1007820 AT5G45050.2 53.846 65 29 1 412 475 1153 1217 4.33e-16 82.4
Msa1007820 AT2G40740.1 51.613 62 26 2 225 282 169 230 6.44e-15 75.9
Msa1007820 AT1G69810.2 40.625 96 53 3 391 484 125 218 7.04e-15 76.3
Msa1007820 AT2G40740.3 51.613 62 26 2 225 282 178 239 8.89e-15 75.5
Msa1007820 AT1G69810.1 40.625 96 53 3 391 484 183 276 9.72e-15 76.6
Msa1007820 AT1G66560.1 44.286 70 36 1 411 477 103 172 2.52e-13 70.5
Msa1007820 AT4G23810.1 45.312 64 31 2 224 283 153 216 3.72e-13 70.9
Msa1007820 AT2G46400.1 34.615 104 58 2 372 465 58 161 6.34e-13 70.1
Msa1007820 AT5G24110.1 42.857 63 32 2 224 282 108 170 4.73e-12 67.4
Msa1007820 AT1G66550.2 35.227 88 54 1 411 495 103 190 5.58e-12 66.6
Msa1007820 AT4G11070.2 46.032 63 30 2 224 282 104 166 5.73e-12 67.0
Msa1007820 AT1G66550.1 40.909 88 44 3 411 495 108 190 6.60e-12 66.2
Msa1007820 AT5G45260.1 33.333 120 68 4 370 484 1172 1284 7.96e-12 68.6
Msa1007820 AT4G11070.1 46.032 63 30 2 224 282 136 198 8.49e-12 66.6
Msa1007820 AT1G80590.1 36.782 87 50 2 412 495 86 170 7.83e-11 62.8

Find 160 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTTTGCACAATAATTT+TGG 0.075608 7_1:+7540780 None:intergenic
ACAAAGTAGACCAATGAATT+TGG 0.210187 7_1:-7544044 Msa1007820:CDS
TCTTCATCTTCTTCCCTTGC+TGG 0.224677 7_1:-7544124 Msa1007820:CDS
CCTCCTGGTTTGAGTCCTTC+TGG 0.239836 7_1:-7543992 Msa1007820:CDS
AAGAAGTGAAGTTGATCTTT+TGG 0.241380 7_1:-7540761 Msa1007820:CDS
GTGATGGTGGGGCGAGGTGG+TGG 0.252742 7_1:+7544295 None:intergenic
TATGTAGTTATGACAGCTTT+TGG 0.273007 7_1:+7538733 None:intergenic
TATGGACAGAAGCAGGTTAA+AGG 0.275933 7_1:-7541655 Msa1007820:CDS
GATGATGGTGGGTCCCTTAA+TGG 0.295876 7_1:-7544076 Msa1007820:CDS
TATGAGACCGGCTGGTATTC+AGG 0.304475 7_1:+7541877 None:intergenic
ACCTTCTCTCAGCTTCTTGC+TGG 0.306616 7_1:-7544172 Msa1007820:CDS
GCACCCTTTGCTTAAAGATA+TGG 0.306944 7_1:-7538605 Msa1007820:CDS
AGTCGGTAATGCAGAGAATA+AGG 0.319523 7_1:-7541290 Msa1007820:CDS
TCAAACTCACAAGGCTGGTT+TGG 0.329319 7_1:-7541430 Msa1007820:CDS
GCATTTCTAGCTTCTGATAC+AGG 0.329336 7_1:+7541778 None:intergenic
TTCTGAGATGGAGGTACTTC+AGG 0.332008 7_1:+7540817 None:intergenic
AGCGTAAATGTACAGGTCTT+TGG 0.336116 7_1:+7538566 None:intergenic
ATGGTGGGGCGAGGTGGTGG+TGG 0.337588 7_1:+7544298 None:intergenic
CAATGTATACAGAGCCCCTT+TGG 0.338611 7_1:-7541976 Msa1007820:intron
TTGTTTAAACCCACCATTAA+GGG 0.345628 7_1:+7544063 None:intergenic
CAACGGAGGGACGGGGTGGG+AGG 0.348056 7_1:+7544272 None:intergenic
TGAGGTGTCGGCGGAGGAAG+GGG 0.349619 7_1:+7544321 None:intergenic
ATAACTGAAATTATCTATAA+AGG 0.355344 7_1:-7541547 Msa1007820:CDS
GGCTACAACTGGCGTAAGTA+TGG 0.356050 7_1:-7541673 Msa1007820:CDS
ACGGGGTGGGAGGGTGATGG+TGG 0.356979 7_1:+7544282 None:intergenic
GGGAGGGTGATGGTGGGGCG+AGG 0.357108 7_1:+7544289 None:intergenic
TTGCGGCGGGCTTTGGTGGT+TGG 0.366164 7_1:+7544361 None:intergenic
GGTGAGGTGTCGGCGGAGGA+AGG 0.366857 7_1:+7544319 None:intergenic
TGGCTGCTGTTTCTAGCAGC+AGG 0.368911 7_1:+7538685 None:intergenic
ACTTGCCTTCTCTTAGGGTT+TGG 0.383067 7_1:+7541247 None:intergenic
GGGGCGAGGTGGTGGTGGTG+AGG 0.384405 7_1:+7544303 None:intergenic
GGCTCTGGTGGCGAAGAATC+AGG 0.385934 7_1:+7541379 None:intergenic
AGGGTGATGGTGGGGCGAGG+TGG 0.386427 7_1:+7544292 None:intergenic
GGCTACAGATGGAGAAAGTA+TGG 0.390807 7_1:-7540733 Msa1007820:CDS
GTGAGGTGTCGGCGGAGGAA+GGG 0.396156 7_1:+7544320 None:intergenic
TGCTCTACCAATCGTTCAGT+GGG 0.398511 7_1:+7541847 None:intergenic
CTTTGGGATGTCACACCAAC+AGG 0.401538 7_1:-7541959 Msa1007820:CDS
TTAAGCAAAGGGTGCTTCTC+TGG 0.402684 7_1:+7538613 None:intergenic
TTTGTTTAAACCCACCATTA+AGG 0.402771 7_1:+7544062 None:intergenic
CGGCGGGCTTTGGTGGTTGG+TGG 0.405643 7_1:+7544364 None:intergenic
TTGCTTAAAGATATGGAGTT+CGG 0.416668 7_1:-7538598 Msa1007820:CDS
GGTGCTGCCACTTGCTGCTC+CGG 0.417228 7_1:+7541799 None:intergenic
GTCAGGTCACTCTCAGGCTC+TGG 0.419822 7_1:+7541364 None:intergenic
AAGCTTGAAACAAGTGTCAT+AGG 0.423831 7_1:+7544214 None:intergenic
CTTGCTGGTGAATATAGTTA+TGG 0.423938 7_1:-7544109 Msa1007820:CDS
GAATGCTTCAACGGAGGGAC+GGG 0.428763 7_1:+7544264 None:intergenic
ATGAGAAGCCTCAGGCGAAT+AGG 0.433247 7_1:-7541513 Msa1007820:CDS
ATGGACAGAAGCAGGTTAAA+GGG 0.434917 7_1:-7541654 Msa1007820:CDS
TCAGCTTCTTGCTGGTGCTA+TGG 0.437218 7_1:-7544164 Msa1007820:CDS
TATTACAAGTGCACTAGTGC+TGG 0.440044 7_1:-7538796 Msa1007820:CDS
TCATCTGCAGGTTTGTCAAT+AGG 0.444331 7_1:+7541697 None:intergenic
CGGGGTGGGAGGGTGATGGT+GGG 0.446290 7_1:+7544283 None:intergenic
GTCTTTCAGGAGCATTGAAC+CGG 0.452255 7_1:-7540845 Msa1007820:intron
GAGGCTTCTCATGGTTATGC+TGG 0.453633 7_1:+7541524 None:intergenic
TAGCCCCTTGATTGGATGTC+AGG 0.455071 7_1:+7541347 None:intergenic
CTGCAGATGACGGCTACAAC+TGG 0.458752 7_1:-7541684 Msa1007820:CDS
TGTGAGTTTGAGTCAGACTT+AGG 0.459987 7_1:+7541442 None:intergenic
TGGTGGTGAGGTGTCGGCGG+AGG 0.462006 7_1:+7544315 None:intergenic
AGGTGGTGGTGGTGAGGTGT+CGG 0.464221 7_1:+7544309 None:intergenic
GCCATCAAAACCACAGGCCT+TGG 0.467026 7_1:-7538638 Msa1007820:CDS
AGAAGCTAGAAATGCTCAAA+TGG 0.468981 7_1:-7541770 Msa1007820:CDS
GAAAACAACAGTGACTTGAA+TGG 0.470727 7_1:-7541481 Msa1007820:CDS
ATTTCAGTTATGTGACCGTC+AGG 0.478963 7_1:+7541559 None:intergenic
GGGGTGGGAGGGTGATGGTG+GGG 0.480359 7_1:+7544284 None:intergenic
GGGACGGGGTGGGAGGGTGA+TGG 0.483065 7_1:+7544279 None:intergenic
TTGGATGTCAGGTCACTCTC+AGG 0.484478 7_1:+7541358 None:intergenic
CGAGCAATAACCAAATTCAT+TGG 0.486817 7_1:+7544034 None:intergenic
TCTTTCAAGCGTAAATGTAC+AGG 0.486956 7_1:+7538559 None:intergenic
CAGTTGTAGCCGTCATCTGC+AGG 0.487042 7_1:+7541685 None:intergenic
ACTTCCAACGCCGTTAGCCC+TGG 0.490755 7_1:-7544238 Msa1007820:CDS
TGGTCTGATAGCCCCTTGAT+TGG 0.499177 7_1:+7541339 None:intergenic
AATGTATACAGAGCCCCTTT+GGG 0.503601 7_1:-7541975 Msa1007820:intron
GATGGTGGGTCCCTTAATGG+TGG 0.511624 7_1:-7544073 Msa1007820:CDS
TGCAGGTTTGTCAATAGGTA+AGG 0.517173 7_1:+7541702 None:intergenic
TAAAGCAATCACCTTGGATG+AGG 0.519370 7_1:+7540688 None:intergenic
AACGGAGGGACGGGGTGGGA+GGG 0.520141 7_1:+7544273 None:intergenic
TATTCGCCTGAGGCTTCTCA+TGG 0.521211 7_1:+7541515 None:intergenic
TTATGCTCAAAATGAAGCTC+CGG 0.521354 7_1:-7541818 Msa1007820:CDS
ACTCCATATCTTTAAGCAAA+GGG 0.522555 7_1:+7538602 None:intergenic
ACACCAACAGGCTTTAGCTC+AGG 0.523835 7_1:-7541947 Msa1007820:CDS
TAATGCAGAGAATAAGGAAG+AGG 0.525319 7_1:-7541284 Msa1007820:CDS
CTCTCACTTGATCCAGGTCG+TGG 0.526754 7_1:+7541319 None:intergenic
CTGCTCTACCAATCGTTCAG+TGG 0.530315 7_1:+7541846 None:intergenic
TCTGTGACAGTCTTCTGAGA+TGG 0.533538 7_1:+7540805 None:intergenic
TTGTCAATAGGTAAGGAAGA+TGG 0.534643 7_1:+7541709 None:intergenic
AGGACCAGGGCTAACGGCGT+TGG 0.536480 7_1:+7544234 None:intergenic
GAAACAAGTGTCATAGGACC+AGG 0.536637 7_1:+7544220 None:intergenic
TGTTGGTGTGACATCCCAAA+GGG 0.541113 7_1:+7541961 None:intergenic
TGGTGGTGGTGAGGTGTCGG+CGG 0.543728 7_1:+7544312 None:intergenic
GGGCTTCGTATGAGACCGGC+TGG 0.543970 7_1:+7541869 None:intergenic
TCCTCACTCTCACTTGATCC+AGG 0.545744 7_1:+7541313 None:intergenic
CTTCAACGGAGGGACGGGGT+GGG 0.550861 7_1:+7544269 None:intergenic
GAGAAAGTATGGTCAGAAAG+TGG 0.552442 7_1:-7540722 Msa1007820:CDS
AGTGACCTGACATCCAATCA+AGG 0.552843 7_1:-7541352 Msa1007820:CDS
GTGAAGAATGCTTCAACGGA+GGG 0.552887 7_1:+7544259 None:intergenic
GCTTCAACGGAGGGACGGGG+TGG 0.554589 7_1:+7544268 None:intergenic
AGTGAAGAATGCTTCAACGG+AGG 0.555116 7_1:+7544258 None:intergenic
AATTGCTACTAGCTGTGTTG+TGG 0.558213 7_1:+7538665 None:intergenic
AGGTCACTCTCAGGCTCTGG+TGG 0.559342 7_1:+7541367 None:intergenic
ATGGTGGGTCCCTTAATGGT+GGG 0.560001 7_1:-7544072 Msa1007820:CDS
GCGTAAGTATGGACAGAAGC+AGG 0.565005 7_1:-7541662 Msa1007820:CDS
GGCTGCTGTTTCTAGCAGCA+GGG 0.565081 7_1:+7538686 None:intergenic
TTCAATGCCATCAAAACCAC+AGG 0.565251 7_1:-7538644 Msa1007820:CDS
AGAATGCTTCAACGGAGGGA+CGG 0.566781 7_1:+7544263 None:intergenic
GCATAACCATGAGAAGCCTC+AGG 0.567008 7_1:-7541521 Msa1007820:CDS
AGCAAGAAGCTGAGAGAAGG+TGG 0.567351 7_1:+7544174 None:intergenic
ACCAGCAAGAAGCTGAGAGA+AGG 0.568077 7_1:+7544171 None:intergenic
TGTCATAGGACCAGGGCTAA+CGG 0.570262 7_1:+7544228 None:intergenic
GGTGTCGGCGGAGGAAGGGG+TGG 0.572761 7_1:+7544324 None:intergenic
ATTACAAGTGCACTAGTGCT+GGG 0.575578 7_1:-7538795 Msa1007820:CDS
AAACCAGAAGGACTCAAACC+AGG 0.575799 7_1:+7543989 None:intergenic
CTGACTCAAACTCACAAGGC+TGG 0.581200 7_1:-7541435 Msa1007820:CDS
GTATGGTCAGAAAGTGGTGA+AGG 0.582502 7_1:-7540716 Msa1007820:CDS
ATATAGTTATGGTGGTAAAG+AGG 0.582591 7_1:-7544098 Msa1007820:CDS
GGAGGTACTTCAGGAACCGC+CGG 0.588740 7_1:+7540826 None:intergenic
TTCTCTGGTACCAAGGCCTG+TGG 0.590238 7_1:+7538628 None:intergenic
GGTGGTAAAGAGGATGATGG+TGG 0.591276 7_1:-7544088 Msa1007820:CDS
GAAGCCTCAGGCGAATAGGC+GGG 0.591591 7_1:-7541509 Msa1007820:CDS
TTGACCCGCCTATTCGCCTG+AGG 0.591896 7_1:+7541505 None:intergenic
AAAGTTGAGCGTGCACCTGA+CGG 0.592511 7_1:-7541574 Msa1007820:CDS
AATGCTTCAACGGAGGGACG+GGG 0.594666 7_1:+7544265 None:intergenic
TATGGTCAGAAAGTGGTGAA+GGG 0.596197 7_1:-7540715 Msa1007820:CDS
AGGGTGCTTCTCTGGTACCA+AGG 0.596792 7_1:+7538621 None:intergenic
AACTCCATATCTTTAAGCAA+AGG 0.596983 7_1:+7538601 None:intergenic
GTGACCTGACATCCAATCAA+GGG 0.600848 7_1:-7541351 Msa1007820:CDS
AGAAGCCTCAGGCGAATAGG+CGG 0.605518 7_1:-7541510 Msa1007820:CDS
CTCTACCAATCGTTCAGTGG+GGG 0.606161 7_1:+7541849 None:intergenic
GGAAGTGAAGAATGCTTCAA+CGG 0.607790 7_1:+7544255 None:intergenic
TTAAAGGGAGCGAGTATCCA+CGG 0.608431 7_1:-7541639 Msa1007820:CDS
ATTGACAAACCTGCAGATGA+CGG 0.609202 7_1:-7541694 Msa1007820:CDS
TGAAGCTCCGGAGCAGCAAG+TGG 0.609950 7_1:-7541806 Msa1007820:CDS
CATAACTATATTCACCAGCA+AGG 0.613727 7_1:+7544110 None:intergenic
ACCTGGATCAAGTGAGAGTG+AGG 0.614136 7_1:-7541314 Msa1007820:CDS
CAATAGGTAAGGAAGATGGT+TGG 0.614676 7_1:+7541713 None:intergenic
TTTCAGGAGCATTGAACCGG+CGG 0.614996 7_1:-7540842 Msa1007820:intron
ACATGTTGAGAGAGCATCAA+CGG 0.615250 7_1:-7538758 Msa1007820:CDS
TATGGTGGTAAAGAGGATGA+TGG 0.615581 7_1:-7544091 Msa1007820:CDS
GTGAGCCAAACCCTAAGAGA+AGG 0.619230 7_1:-7541252 Msa1007820:intron
ATAACTATATTCACCAGCAA+GGG 0.620679 7_1:+7544111 None:intergenic
AATGCAGAGAATAAGGAAGA+GGG 0.624503 7_1:-7541283 Msa1007820:CDS
GTGACAGTCTTCTGAGATGG+AGG 0.627629 7_1:+7540808 None:intergenic
AAGAAGCTGAGAGAAGGTGG+CGG 0.633346 7_1:+7544177 None:intergenic
TAACCTGAGCTAAAGCCTGT+TGG 0.633996 7_1:+7541944 None:intergenic
TGAAGGGAAATCCTCATCCA+AGG 0.635283 7_1:-7540699 Msa1007820:intron
GCATATTATGAGATTGTGCT+AGG 0.638871 7_1:+7541908 None:intergenic
AGCTGTCATAACTACATACG+AGG 0.647376 7_1:-7538728 Msa1007820:CDS
CTGTTGGTGTGACATCCCAA+AGG 0.648368 7_1:+7541960 None:intergenic
CATGCAACCTGAATACCAGC+CGG 0.650592 7_1:-7541884 Msa1007820:CDS
TCAAGTGAGAGTGAGGAAGT+CGG 0.661722 7_1:-7541307 Msa1007820:CDS
GGAGAGTTAAGAAAACCAGA+AGG 0.664457 7_1:+7543977 None:intergenic
TGACCTGACATCCAATCAAG+GGG 0.668410 7_1:-7541350 Msa1007820:CDS
GTGGTAAAGAGGATGATGGT+GGG 0.669463 7_1:-7544087 Msa1007820:CDS
AAGTCTGACTCAAACTCACA+AGG 0.672355 7_1:-7541439 Msa1007820:CDS
GTTGGTGTGACATCCCAAAG+GGG 0.679816 7_1:+7541962 None:intergenic
GCTGGTGAATATAGTTATGG+TGG 0.682108 7_1:-7544106 Msa1007820:CDS
GCTCTACCAATCGTTCAGTG+GGG 0.682396 7_1:+7541848 None:intergenic
GCTGTCATAACTACATACGA+GGG 0.696077 7_1:-7538727 Msa1007820:CDS
AAACAAGTGTCATAGGACCA+GGG 0.712649 7_1:+7544221 None:intergenic
CCAGAAGGACTCAAACCAGG+AGG 0.725995 7_1:+7543992 None:intergenic
GTGCATTTGTAGTAGCTCCG+TGG 0.754411 7_1:+7541622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAAAAATACAAAGAT+TGG + chr7_1:7542562-7542581 None:intergenic 10.0%
!!! AAAAATAATACTTCATTTTA+GGG + chr7_1:7543162-7543181 None:intergenic 10.0%
!!! TTTGTATTCAATTTTCAAAA+GGG - chr7_1:7539059-7539078 Msa1007820:intron 15.0%
!! TAAAAAAGTTAGATTTGATA+CGG - chr7_1:7539127-7539146 Msa1007820:intron 15.0%
!!! TTGTAATGTTATTTTGATTT+TGG - chr7_1:7539418-7539437 Msa1007820:intron 15.0%
!!! TGTAATGTTATTTTGATTTT+GGG - chr7_1:7539419-7539438 Msa1007820:intron 15.0%
!! ATAACTGAAATTATCTATAA+AGG - chr7_1:7541416-7541435 Msa1007820:CDS 15.0%
!! AAATTCATCTTTATTCAATT+TGG - chr7_1:7541911-7541930 Msa1007820:CDS 15.0%
!!! GAAAAATAATACTTCATTTT+AGG + chr7_1:7543163-7543182 None:intergenic 15.0%
!! GAAACAAAATTTAGTCAAAA+GGG + chr7_1:7539039-7539058 None:intergenic 20.0%
!! AGAAACAAAATTTAGTCAAA+AGG + chr7_1:7539040-7539059 None:intergenic 20.0%
!!! CTTTGTATTCAATTTTCAAA+AGG - chr7_1:7539058-7539077 Msa1007820:intron 20.0%
!! AAAAAAGTTAGATTTGATAC+GGG - chr7_1:7539128-7539147 Msa1007820:intron 20.0%
!!! GTAAAATGAAAAGTTTTATG+TGG - chr7_1:7539721-7539740 Msa1007820:intron 20.0%
!!! AACTCAAAAACTTTTCATTA+TGG + chr7_1:7539781-7539800 None:intergenic 20.0%
!! TGAATAATATATTAACATGC+CGG + chr7_1:7540031-7540050 None:intergenic 20.0%
!!! TTCTTTTGTATTAGTTTTGA+TGG - chr7_1:7540513-7540532 Msa1007820:intron 20.0%
!!! TCTTTTGTATTAGTTTTGAT+GGG - chr7_1:7540514-7540533 Msa1007820:intron 20.0%
!! AAAAACAAAGATAAAGTTTG+TGG - chr7_1:7540554-7540573 Msa1007820:intron 20.0%
!!! GAAAAACTTTTGATTATGAA+GGG + chr7_1:7540613-7540632 None:intergenic 20.0%
!!! CTTCATAATCAAAAGTTTTT+CGG - chr7_1:7540612-7540631 Msa1007820:intron 20.0%
!! CATTATATTACATCATTTAC+TGG - chr7_1:7540866-7540885 Msa1007820:intron 20.0%
!! ATTGAATAAAGATGAATTTG+AGG + chr7_1:7541910-7541929 None:intergenic 20.0%
!! GATAAACTTCATAACTATTA+AGG + chr7_1:7542436-7542455 None:intergenic 20.0%
!!! AAATGCACTTTTATAGTATT+TGG - chr7_1:7542485-7542504 Msa1007820:intron 20.0%
!! AACTTCTAAATTATAAGCAA+GGG - chr7_1:7542705-7542724 Msa1007820:intron 20.0%
!! AAGATCAAACTAATATCAAT+CGG + chr7_1:7542856-7542875 None:intergenic 20.0%
!!! GATCTTGAAATATCATTTTA+AGG - chr7_1:7542870-7542889 Msa1007820:intron 20.0%
!! TCAAAATATAAATCAGTTCA+GGG + chr7_1:7543095-7543114 None:intergenic 20.0%
!!! AACTGATTTATATTTTGAGA+CGG - chr7_1:7543097-7543116 Msa1007820:intron 20.0%
!!! AGAAACTCATTATTTTAACT+TGG - chr7_1:7543364-7543383 Msa1007820:intron 20.0%
!! AGAAACAAAAACATATGTTT+AGG + chr7_1:7543590-7543609 None:intergenic 20.0%
!!! TAAACATATGTTTTTGTTTC+TGG - chr7_1:7543589-7543608 Msa1007820:intron 20.0%
! AAAAAGTTAGATTTGATACG+GGG - chr7_1:7539129-7539148 Msa1007820:intron 25.0%
!!! ATGTTATTTTGATTTTGGGA+TGG - chr7_1:7539423-7539442 Msa1007820:intron 25.0%
!!! TGTTATTTTGATTTTGGGAT+GGG - chr7_1:7539424-7539443 Msa1007820:intron 25.0%
!!! TAGTGGATTAATGATTCTTT+AGG - chr7_1:7539557-7539576 Msa1007820:intron 25.0%
!!! AGTGGATTAATGATTCTTTA+GGG - chr7_1:7539558-7539577 Msa1007820:intron 25.0%
!!! TCATTTTTACAAAGTTTGTG+TGG - chr7_1:7539636-7539655 Msa1007820:intron 25.0%
!! ATTTTCTTTTGTGGTAGTTT+TGG - chr7_1:7540083-7540102 Msa1007820:intron 25.0%
! TAAAATGACGATAAAGTTTG+TGG - chr7_1:7540127-7540146 Msa1007820:intron 25.0%
!!! TTGTGGCTTTTATTTGTTTT+TGG - chr7_1:7540144-7540163 Msa1007820:intron 25.0%
!! TGTGAATCAATTTTCACTTT+TGG - chr7_1:7540400-7540419 Msa1007820:intron 25.0%
!!! TTTCACTTTTGGTTTTTGTT+TGG - chr7_1:7540411-7540430 Msa1007820:intron 25.0%
! ATAGTTACATGATTGGATAA+TGG - chr7_1:7540445-7540464 Msa1007820:intron 25.0%
!!! CTTTTGTATTAGTTTTGATG+GGG - chr7_1:7540515-7540534 Msa1007820:intron 25.0%
!!! TTGTGGCTTTAATTTGTTTT+TGG - chr7_1:7540571-7540590 Msa1007820:intron 25.0%
!!! CGAAAAACTTTTGATTATGA+AGG + chr7_1:7540614-7540633 None:intergenic 25.0%
! TTTGTAATTTCGATACATTC+AGG - chr7_1:7541973-7541992 Msa1007820:intron 25.0%
! TTGTAATTTCGATACATTCA+GGG - chr7_1:7541974-7541993 Msa1007820:intron 25.0%
!! CTTGTTTGCACAATAATTTT+GGG + chr7_1:7542185-7542204 None:intergenic 25.0%
!!! TCTTGTTTGCACAATAATTT+TGG + chr7_1:7542186-7542205 None:intergenic 25.0%
!! CTATAGCAGAAATTTGTTTA+AGG + chr7_1:7542381-7542400 None:intergenic 25.0%
! ACTGAAACAAATTTAGACAA+TGG - chr7_1:7542671-7542690 Msa1007820:intron 25.0%
! GAACTTCTAAATTATAAGCA+AGG - chr7_1:7542704-7542723 Msa1007820:intron 25.0%
! TAAAACTAGTACAATGTAGT+TGG - chr7_1:7543020-7543039 Msa1007820:intron 25.0%
! CTCAAAATATAAATCAGTTC+AGG + chr7_1:7543096-7543115 None:intergenic 25.0%
!!! ACTGATTTATATTTTGAGAC+GGG - chr7_1:7543098-7543117 Msa1007820:intron 25.0%
!!! TTAAGTTTGTTGTTCTCAAA+TGG + chr7_1:7543309-7543328 None:intergenic 25.0%
!! AACCATTAATTTTCTACATG+TGG - chr7_1:7543427-7543446 Msa1007820:intron 25.0%
! TACCACATGTAGAAAATTAA+TGG + chr7_1:7543432-7543451 None:intergenic 25.0%
! ATCATTTGTCATGTAACTTT+GGG - chr7_1:7543668-7543687 Msa1007820:intron 25.0%
! ATCATTTGTCATGTAACTTT+GGG - chr7_1:7543668-7543687 Msa1007820:intron 25.0%
ATAACTATATTCACCAGCAA+GGG + chr7_1:7538855-7538874 None:intergenic 30.0%
ATATAGTTATGGTGGTAAAG+AGG - chr7_1:7538865-7538884 Msa1007820:intron 30.0%
TTGTTTAAACCCACCATTAA+GGG + chr7_1:7538903-7538922 None:intergenic 30.0%
TTTGTTTAAACCCACCATTA+AGG + chr7_1:7538904-7538923 None:intergenic 30.0%
ACAAAGTAGACCAATGAATT+TGG - chr7_1:7538919-7538938 Msa1007820:intron 30.0%
!! TCTGTGTTTTTGTGTGAAAT+TGG - chr7_1:7539180-7539199 Msa1007820:intron 30.0%
!! TGTTTTTGTGTGAAATTGGT+TGG - chr7_1:7539184-7539203 Msa1007820:intron 30.0%
! TTTTGTTGAGCTGTGTATAT+TGG - chr7_1:7539381-7539400 Msa1007820:intron 30.0%
!! AAATCTGTCTGTGTTTTTGT+AGG - chr7_1:7539469-7539488 Msa1007820:intron 30.0%
!!! TCTTTAGGGTTCTTTTGATT+TGG - chr7_1:7539572-7539591 Msa1007820:intron 30.0%
!!! TTGATTTGGTGTGTTTTTGA+AGG - chr7_1:7539586-7539605 Msa1007820:intron 30.0%
!!! TGATTTGGTGTGTTTTTGAA+GGG - chr7_1:7539587-7539606 Msa1007820:intron 30.0%
!!! CTTTTGTGATAGTTTTGATG+CGG - chr7_1:7539683-7539702 Msa1007820:intron 30.0%
! GTTTTATGTGGATGACTTTT+TGG - chr7_1:7539733-7539752 Msa1007820:intron 30.0%
! TATGGAGTGTCTTACAAAAA+CGG + chr7_1:7539763-7539782 None:intergenic 30.0%
ACTGAAGTGTATTGTAAAGA+CGG + chr7_1:7540174-7540193 None:intergenic 30.0%
TTCCCGTCAATTCTTTATAA+TGG - chr7_1:7540206-7540225 Msa1007820:intron 30.0%
TGCCATTATAAAGAATTGAC+GGG + chr7_1:7540211-7540230 None:intergenic 30.0%
! GTGCCATTATAAAGAATTGA+CGG + chr7_1:7540212-7540231 None:intergenic 30.0%
!! ACACAGATTTGACTTTTGAT+TGG + chr7_1:7540270-7540289 None:intergenic 30.0%
TAAATACATGCGAACTAAGA+CGG + chr7_1:7540368-7540387 None:intergenic 30.0%
GTTTCTGATAGTTACATGAT+TGG - chr7_1:7540438-7540457 Msa1007820:intron 30.0%
!! GATTAAGCATTACTTTTGTG+TGG - chr7_1:7540484-7540503 Msa1007820:intron 30.0%
! ACACCTTTAATCTGAAATGT+CGG + chr7_1:7540720-7540739 None:intergenic 30.0%
! TTTCAGATTAAAGGTGTGTT+TGG - chr7_1:7540723-7540742 Msa1007820:CDS 30.0%
! TATCTGAAACTAACATGTGT+CGG + chr7_1:7540752-7540771 None:intergenic 30.0%
! GACACATTTAGGTATGTTTT+AGG + chr7_1:7541837-7541856 None:intergenic 30.0%
TTGAGGACTAAACTAACTAA+TGG + chr7_1:7541893-7541912 None:intergenic 30.0%
TGTAATTTCGATACATTCAG+GGG - chr7_1:7541975-7541994 Msa1007820:intron 30.0%
!! AAGAAGTGAAGTTGATCTTT+TGG - chr7_1:7542202-7542221 Msa1007820:intron 30.0%
AATAGTTAAAGCAATCACCT+TGG + chr7_1:7542284-7542303 None:intergenic 30.0%
GAATTCAAAATCACAAAGCA+AGG + chr7_1:7543192-7543211 None:intergenic 30.0%
ACAACTGACAAATCCTATAT+TGG + chr7_1:7543260-7543279 None:intergenic 30.0%
AGAATCTCGTTTCTTATAGT+AGG + chr7_1:7543285-7543304 None:intergenic 30.0%
!!! CTCATTATTTTAACTTGGCA+AGG - chr7_1:7543369-7543388 Msa1007820:intron 30.0%
!! TGTTCATTCACTTTTCTTTC+TGG - chr7_1:7543501-7543520 Msa1007820:intron 30.0%
!! GTTCATTCACTTTTCTTTCT+GGG - chr7_1:7543502-7543521 Msa1007820:intron 30.0%
! TGTTTAGGACATCAATGTAT+GGG + chr7_1:7543575-7543594 None:intergenic 30.0%
! ATGTTTAGGACATCAATGTA+TGG + chr7_1:7543576-7543595 None:intergenic 30.0%
CATCATTTGTCATGTAACTT+TGG - chr7_1:7543667-7543686 Msa1007820:intron 30.0%
CATCATTTGTCATGTAACTT+TGG - chr7_1:7543667-7543686 Msa1007820:intron 30.0%
!! CAATTTGTTGCAAGATTGAA+AGG + chr7_1:7544061-7544080 None:intergenic 30.0%
! ATGTAGTTATGACAGCTTTT+GGG + chr7_1:7544232-7544251 None:intergenic 30.0%
! TATGTAGTTATGACAGCTTT+TGG + chr7_1:7544233-7544252 None:intergenic 30.0%
ACTCCATATCTTTAAGCAAA+GGG + chr7_1:7544364-7544383 None:intergenic 30.0%
AACTCCATATCTTTAAGCAA+AGG + chr7_1:7544365-7544384 None:intergenic 30.0%
TTGCTTAAAGATATGGAGTT+CGG - chr7_1:7544365-7544384 Msa1007820:five_prime_UTR 30.0%
!! TGGTTGTTGACATGTTTTTG+CGG + chr7_1:7538622-7538641 None:intergenic 35.0%
AAGCTTGAAACAAGTGTCAT+AGG + chr7_1:7538752-7538771 None:intergenic 35.0%
GAAGATGAAGAAAAAGCAAG+AGG + chr7_1:7538830-7538849 None:intergenic 35.0%
CATAACTATATTCACCAGCA+AGG + chr7_1:7538856-7538875 None:intergenic 35.0%
CTTGCTGGTGAATATAGTTA+TGG - chr7_1:7538854-7538873 Msa1007820:intron 35.0%
CGAGCAATAACCAAATTCAT+TGG + chr7_1:7538932-7538951 None:intergenic 35.0%
!! GTTTTTGAAGGGATTGATGA+AGG - chr7_1:7539598-7539617 Msa1007820:intron 35.0%
! ATTGATGAAGGTGTAGTGTT+TGG - chr7_1:7539610-7539629 Msa1007820:intron 35.0%
TGATTAAGTGACACAATGAC+AGG - chr7_1:7539809-7539828 Msa1007820:intron 35.0%
ACATAATTCATGAGTCATGC+CGG - chr7_1:7540009-7540028 Msa1007820:intron 35.0%
! AAAGTGAAACGACTTTTGTG+TGG - chr7_1:7540057-7540076 Msa1007820:intron 35.0%
! GTGTGGATGATTTTCTTTTG+TGG - chr7_1:7539669-7539688 Msa1007820:intron 35.0%
!!! TTCTTTTGTGGTAGTTTTGG+TGG - chr7_1:7540086-7540105 Msa1007820:intron 35.0%
!!! TCTTTTGTGGTAGTTTTGGT+GGG - chr7_1:7540087-7540106 Msa1007820:intron 35.0%
TTAATTAATAAGCAGCCCAG+TGG + chr7_1:7540247-7540266 None:intergenic 35.0%
CAAAAGTCAAATCTGTGTGA+TGG - chr7_1:7540272-7540291 Msa1007820:intron 35.0%
!!! TTGTGTGATGGGTTTTTGAT+TGG - chr7_1:7540310-7540329 Msa1007820:intron 35.0%
!!! TGTGTGATGGGTTTTTGATT+GGG - chr7_1:7540311-7540330 Msa1007820:intron 35.0%
!! AAGCATTACTTTTGTGTGGA+TGG - chr7_1:7540488-7540507 Msa1007820:intron 35.0%
CATGAACAAGTAGAATGCTA+AGG + chr7_1:7540679-7540698 None:intergenic 35.0%
TAGCATTCTACTTGTTCATG+AGG - chr7_1:7540679-7540698 Msa1007820:intron 35.0%
GAACCGACATTTCAGATTAA+AGG - chr7_1:7540714-7540733 Msa1007820:CDS 35.0%
! AATGTCATCATTTTCCCTTG+AGG - chr7_1:7540925-7540944 Msa1007820:intron 35.0%
GCATATTATGAGATTGTGCT+AGG + chr7_1:7541058-7541077 None:intergenic 35.0%
! GCTTCATTTTGAGCATAAGA+CGG + chr7_1:7541143-7541162 None:intergenic 35.0%
TTATGCTCAAAATGAAGCTC+CGG - chr7_1:7541145-7541164 Msa1007820:intron 35.0%
AGAAGCTAGAAATGCTCAAA+TGG - chr7_1:7541193-7541212 Msa1007820:intron 35.0%
TTGTCAATAGGTAAGGAAGA+TGG + chr7_1:7541257-7541276 None:intergenic 35.0%
!!! ACGCTCAACTTTTTTCTTCA+CGG + chr7_1:7541381-7541400 None:intergenic 35.0%
GAAAACAACAGTGACTTGAA+TGG - chr7_1:7541482-7541501 Msa1007820:CDS 35.0%
TAATGCAGAGAATAAGGAAG+AGG - chr7_1:7541679-7541698 Msa1007820:CDS 35.0%
AATGCAGAGAATAAGGAAGA+GGG - chr7_1:7541680-7541699 Msa1007820:CDS 35.0%
GAAAAACTTGCCTTCTCTTA+GGG + chr7_1:7541724-7541743 None:intergenic 35.0%
AGAAAAACTTGCCTTCTCTT+AGG + chr7_1:7541725-7541744 None:intergenic 35.0%
GACAAACAGAAGACACATTT+AGG + chr7_1:7541848-7541867 None:intergenic 35.0%
ACTAATGGAATACACATTCG+AGG + chr7_1:7541878-7541897 None:intergenic 35.0%
CGCTTTAGCTAGTAATGTTA+CGG + chr7_1:7541938-7541957 None:intergenic 35.0%
TTAACCCTAAATGTGTGAGA+CGG + chr7_1:7542010-7542029 None:intergenic 35.0%
ATAGTTATACATAAGCGCAG+CGG + chr7_1:7542074-7542093 None:intergenic 35.0%
!! GAAGTTGATCTTTTGGATGA+TGG - chr7_1:7542209-7542228 Msa1007820:intron 35.0%
TGTGTAATATGAAACTGGAG+AGG + chr7_1:7542617-7542636 None:intergenic 35.0%
GTGCATGTGTAATATGAAAC+TGG + chr7_1:7542622-7542641 None:intergenic 35.0%
AGCAACAGTATGGAATAAGA+GGG + chr7_1:7542953-7542972 None:intergenic 35.0%
CAAAATCACAAAGCAAGGAT+GGG + chr7_1:7543187-7543206 None:intergenic 35.0%
TCAAAATCACAAAGCAAGGA+TGG + chr7_1:7543188-7543207 None:intergenic 35.0%
TTATCTGTGTATCAGCTTGA+AGG - chr7_1:7543225-7543244 Msa1007820:intron 35.0%
AAGGTTTCATGGACCAATAT+AGG - chr7_1:7543244-7543263 Msa1007820:intron 35.0%
! GTTTAGGACATCAATGTATG+GGG + chr7_1:7543574-7543593 None:intergenic 35.0%
TTACATGACAAATGATGCCT+TGG + chr7_1:7543664-7543683 None:intergenic 35.0%
TTACATGACAAATGATGCCT+TGG + chr7_1:7543664-7543683 None:intergenic 35.0%
GAGAGCTTATGAAAATAAGC+TGG + chr7_1:7543888-7543907 None:intergenic 35.0%
!! CTTATTTTCATAAGCTCTCC+AGG - chr7_1:7543889-7543908 Msa1007820:intron 35.0%
AATTCCTTTGTCGATGTGTA+TGG - chr7_1:7544017-7544036 Msa1007820:CDS 35.0%
AATGCTGAATTTCTGTGAAC+AGG - chr7_1:7544141-7544160 Msa1007820:CDS 35.0%
TCTTTCAAGCGTAAATGTAC+AGG + chr7_1:7544407-7544426 None:intergenic 35.0%
!! TTGTTGACATGTTTTTGCGG+CGG + chr7_1:7538619-7538638 None:intergenic 40.0%
GGAAGTGAAGAATGCTTCAA+CGG + chr7_1:7538711-7538730 None:intergenic 40.0%
AAACAAGTGTCATAGGACCA+GGG + chr7_1:7538745-7538764 None:intergenic 40.0%
GCTGGTGAATATAGTTATGG+TGG - chr7_1:7538857-7538876 Msa1007820:intron 40.0%
TATGGTGGTAAAGAGGATGA+TGG - chr7_1:7538872-7538891 Msa1007820:intron 40.0%
GGAGAGTTAAGAAAACCAGA+AGG + chr7_1:7538989-7539008 None:intergenic 40.0%
!!! TCTGGTTTTCTTAACTCTCC+TGG - chr7_1:7538989-7539008 Msa1007820:intron 40.0%
TCAAAAGGGTCAATTACCTG+AGG + chr7_1:7539025-7539044 None:intergenic 40.0%
TAGTGTTGTGTTGTCTCTAG+TGG - chr7_1:7539540-7539559 Msa1007820:intron 40.0%
! TGTGTGGAATGACTTTTGTG+TGG - chr7_1:7539652-7539671 Msa1007820:intron 40.0%
!!! TTGTGATAGTTTTGATGCGG+TGG - chr7_1:7539686-7539705 Msa1007820:intron 40.0%
GTACTTGTTCATGAGCTATG+AGG - chr7_1:7539849-7539868 Msa1007820:intron 40.0%
!!! CTTTTGTGGTAGTTTTGGTG+GGG - chr7_1:7540088-7540107 Msa1007820:intron 40.0%
! CACCGTGTAATTTTTCCACT+GGG - chr7_1:7540229-7540248 Msa1007820:intron 40.0%
AGCCCAGTGGAAAAATTACA+CGG + chr7_1:7540234-7540253 None:intergenic 40.0%
TTACGACAGTCATTGTGTGA+TGG - chr7_1:7540298-7540317 Msa1007820:intron 40.0%
TACGACAGTCATTGTGTGAT+GGG - chr7_1:7540299-7540318 Msa1007820:intron 40.0%
!!! GTGTGATGGGTTTTTGATTG+GGG - chr7_1:7540312-7540331 Msa1007820:intron 40.0%
AATGTATACAGAGCCCCTTT+GGG - chr7_1:7540988-7541007 Msa1007820:intron 40.0%
!! GCATTTCTAGCTTCTGATAC+AGG + chr7_1:7541188-7541207 None:intergenic 40.0%
CAATAGGTAAGGAAGATGGT+TGG + chr7_1:7541253-7541272 None:intergenic 40.0%
TGCAGGTTTGTCAATAGGTA+AGG + chr7_1:7541264-7541283 None:intergenic 40.0%
TCATCTGCAGGTTTGTCAAT+AGG + chr7_1:7541269-7541288 None:intergenic 40.0%
ATTGACAAACCTGCAGATGA+CGG - chr7_1:7541269-7541288 Msa1007820:CDS 40.0%
TATGGACAGAAGCAGGTTAA+AGG - chr7_1:7541308-7541327 Msa1007820:CDS 40.0%
ATGGACAGAAGCAGGTTAAA+GGG - chr7_1:7541309-7541328 Msa1007820:CDS 40.0%
!!! CGCTCAACTTTTTTCTTCAC+GGG + chr7_1:7541380-7541399 None:intergenic 40.0%
ATTTCAGTTATGTGACCGTC+AGG + chr7_1:7541407-7541426 None:intergenic 40.0%
TGTGAGTTTGAGTCAGACTT+AGG + chr7_1:7541524-7541543 None:intergenic 40.0%
AAGTCTGACTCAAACTCACA+AGG - chr7_1:7541524-7541543 Msa1007820:CDS 40.0%
AGTCGGTAATGCAGAGAATA+AGG - chr7_1:7541673-7541692 Msa1007820:CDS 40.0%
CCTTGAATAGTCAAACGTGT+CGG - chr7_1:7541768-7541787 Msa1007820:CDS 40.0%
CTTGAATAGTCAAACGTGTC+GGG - chr7_1:7541769-7541788 Msa1007820:CDS 40.0%
ATTACTAGCTAAAGCGACAC+TGG - chr7_1:7541942-7541961 Msa1007820:CDS 40.0%
TTACTAGCTAAAGCGACACT+GGG - chr7_1:7541943-7541962 Msa1007820:CDS 40.0%
GCTAAATCTCTCTGTCTTTC+AGG - chr7_1:7542105-7542124 Msa1007820:intron 40.0%
!! TTTTGGATGATGGCTACAGA+TGG - chr7_1:7542219-7542238 Msa1007820:intron 40.0%
! GAGAAAGTATGGTCAGAAAG+TGG - chr7_1:7542241-7542260 Msa1007820:intron 40.0%
TATGGTCAGAAAGTGGTGAA+GGG - chr7_1:7542248-7542267 Msa1007820:intron 40.0%
TAAAGCAATCACCTTGGATG+AGG + chr7_1:7542278-7542297 None:intergenic 40.0%
GAGTACGTAACGACTTTCTA+AGG + chr7_1:7542908-7542927 None:intergenic 40.0%
GAGCAACAGTATGGAATAAG+AGG + chr7_1:7542954-7542973 None:intergenic 40.0%
GCAATGAAAGAGCAACAGTA+TGG + chr7_1:7542963-7542982 None:intergenic 40.0%
TGTTGCTCTTTCATTGCACT+TGG - chr7_1:7542966-7542985 Msa1007820:intron 40.0%
GTATCAGCTTGAAGGTTTCA+TGG - chr7_1:7543233-7543252 Msa1007820:intron 40.0%
! CATGTAGAAAGCATGCAAGT+GGG + chr7_1:7543395-7543414 None:intergenic 40.0%
! TCATGTAGAAAGCATGCAAG+TGG + chr7_1:7543396-7543415 None:intergenic 40.0%
ATTCATGCAGTTTCTCGTTG+TGG - chr7_1:7543458-7543477 Msa1007820:intron 40.0%
TTCATGCAGTTTCTCGTTGT+GGG - chr7_1:7543459-7543478 Msa1007820:intron 40.0%
TTAGCACTAGTTAGTGTCCA+AGG - chr7_1:7543644-7543663 Msa1007820:intron 40.0%
!! GCTGTTTTCATAAGCAATCC+TGG + chr7_1:7543910-7543929 None:intergenic 40.0%
ACATCGACAAAGGAATTGCT+TGG + chr7_1:7544014-7544033 None:intergenic 40.0%
TCAACCATACACATCGACAA+AGG + chr7_1:7544024-7544043 None:intergenic 40.0%
TATTACAAGTGCACTAGTGC+TGG - chr7_1:7544167-7544186 Msa1007820:CDS 40.0%
ATTACAAGTGCACTAGTGCT+GGG - chr7_1:7544168-7544187 Msa1007820:CDS 40.0%
!! ACATGTTGAGAGAGCATCAA+CGG - chr7_1:7544205-7544224 Msa1007820:CDS 40.0%
AGCTGTCATAACTACATACG+AGG - chr7_1:7544235-7544254 Msa1007820:CDS 40.0%
GCTGTCATAACTACATACGA+GGG - chr7_1:7544236-7544255 Msa1007820:CDS 40.0%
AATTGCTACTAGCTGTGTTG+TGG + chr7_1:7544301-7544320 None:intergenic 40.0%
TTCAATGCCATCAAAACCAC+AGG - chr7_1:7544319-7544338 Msa1007820:CDS 40.0%
GCACCCTTTGCTTAAAGATA+TGG - chr7_1:7544358-7544377 Msa1007820:five_prime_UTR 40.0%
AGCGTAAATGTACAGGTCTT+TGG + chr7_1:7544400-7544419 None:intergenic 40.0%
!! TGTTGACATGTTTTTGCGGC+GGG + chr7_1:7538618-7538637 None:intergenic 45.0%
GTGAAGAATGCTTCAACGGA+GGG + chr7_1:7538707-7538726 None:intergenic 45.0%
AGTGAAGAATGCTTCAACGG+AGG + chr7_1:7538708-7538727 None:intergenic 45.0%
GAAACAAGTGTCATAGGACC+AGG + chr7_1:7538746-7538765 None:intergenic 45.0%
TCTTCATCTTCTTCCCTTGC+TGG - chr7_1:7538839-7538858 Msa1007820:intron 45.0%
! GTGGTAAAGAGGATGATGGT+GGG - chr7_1:7538876-7538895 Msa1007820:intron 45.0%
CCAGGAGGAACAGTAAAAAC+AGG + chr7_1:7538959-7538978 None:intergenic 45.0%
!!! CCTGTTTTTACTGTTCCTCC+TGG - chr7_1:7538956-7538975 Msa1007820:intron 45.0%
AAACCAGAAGGACTCAAACC+AGG + chr7_1:7538977-7538996 None:intergenic 45.0%
!!! TCCTGGCTTTTTTTCACCTC+AGG - chr7_1:7539006-7539025 Msa1007820:intron 45.0%
ACCTGAGGTGAAAAAAAGCC+AGG + chr7_1:7539010-7539029 None:intergenic 45.0%
!!! GATTTTGGGATGGGAAGTTG+TGG - chr7_1:7539433-7539452 Msa1007820:intron 45.0%
! AATGCGAAGTGTCAGTGACT+TGG - chr7_1:7539982-7540001 Msa1007820:intron 45.0%
! GCACCGTGTAATTTTTCCAC+TGG - chr7_1:7540228-7540247 Msa1007820:intron 45.0%
TGTCGTGTCTGTAATCGTGA+AGG - chr7_1:7540837-7540856 Msa1007820:CDS 45.0%
GTCGTGTCTGTAATCGTGAA+GGG - chr7_1:7540838-7540857 Msa1007820:CDS 45.0%
! GTCATCATTTTCCCTTGAGG+TGG - chr7_1:7540928-7540947 Msa1007820:intron 45.0%
CAATGTATACAGAGCCCCTT+TGG - chr7_1:7540987-7541006 Msa1007820:intron 45.0%
TGTTGGTGTGACATCCCAAA+GGG + chr7_1:7541005-7541024 None:intergenic 45.0%
TAACCTGAGCTAAAGCCTGT+TGG + chr7_1:7541022-7541041 None:intergenic 45.0%
TGCTCTACCAATCGTTCAGT+GGG + chr7_1:7541119-7541138 None:intergenic 45.0%
TTAAAGGGAGCGAGTATCCA+CGG - chr7_1:7541324-7541343 Msa1007820:CDS 45.0%
! TCAAACTCACAAGGCTGGTT+TGG - chr7_1:7541533-7541552 Msa1007820:CDS 45.0%
AGTGACCTGACATCCAATCA+AGG - chr7_1:7541611-7541630 Msa1007820:CDS 45.0%
GTGACCTGACATCCAATCAA+GGG - chr7_1:7541612-7541631 Msa1007820:CDS 45.0%
TGACCTGACATCCAATCAAG+GGG - chr7_1:7541613-7541632 Msa1007820:CDS 45.0%
TCAAGTGAGAGTGAGGAAGT+CGG - chr7_1:7541656-7541675 Msa1007820:CDS 45.0%
ACTTGCCTTCTCTTAGGGTT+TGG + chr7_1:7541719-7541738 None:intergenic 45.0%
CCGACACGTTTGACTATTCA+AGG + chr7_1:7541771-7541790 None:intergenic 45.0%
TACTAGCTAAAGCGACACTG+GGG - chr7_1:7541944-7541963 Msa1007820:CDS 45.0%
AGACACCGTCTCACACATTT+AGG - chr7_1:7542002-7542021 Msa1007820:intron 45.0%
GACACCGTCTCACACATTTA+GGG - chr7_1:7542003-7542022 Msa1007820:intron 45.0%
TAAGCGCAGCGGAATGAATA+TGG + chr7_1:7542063-7542082 None:intergenic 45.0%
!! GTCTTTCAGGAGCATTGAAC+CGG - chr7_1:7542118-7542137 Msa1007820:intron 45.0%
!! TTCTGAGATGGAGGTACTTC+AGG + chr7_1:7542149-7542168 None:intergenic 45.0%
! TCTGTGACAGTCTTCTGAGA+TGG + chr7_1:7542161-7542180 None:intergenic 45.0%
GGCTACAGATGGAGAAAGTA+TGG - chr7_1:7542230-7542249 Msa1007820:intron 45.0%
GTATGGTCAGAAAGTGGTGA+AGG - chr7_1:7542247-7542266 Msa1007820:intron 45.0%
TGAAGGGAAATCCTCATCCA+AGG - chr7_1:7542264-7542283 Msa1007820:intron 45.0%
GTGAGGGAGAGAAAAGGATT+CGG + chr7_1:7542775-7542794 None:intergenic 45.0%
TAGGACATCAATGTATGGGG+TGG + chr7_1:7543571-7543590 None:intergenic 45.0%
AACTTTGGGCGTGTTTGAAG+TGG - chr7_1:7543682-7543701 Msa1007820:intron 45.0%
TCAGCACTAGTTAGTGTCCA+AGG - chr7_1:7543780-7543799 Msa1007820:intron 45.0%
!! TTAAGCAAAGGGTGCTTCTC+TGG + chr7_1:7544353-7544372 None:intergenic 45.0%
AGAATGCTTCAACGGAGGGA+CGG + chr7_1:7538703-7538722 None:intergenic 50.0%
TGTCATAGGACCAGGGCTAA+CGG + chr7_1:7538738-7538757 None:intergenic 50.0%
AAGAAGCTGAGAGAAGGTGG+CGG + chr7_1:7538789-7538808 None:intergenic 50.0%
AGCAAGAAGCTGAGAGAAGG+TGG + chr7_1:7538792-7538811 None:intergenic 50.0%
ACCTTCTCTCAGCTTCTTGC+TGG - chr7_1:7538791-7538810 Msa1007820:CDS 50.0%
ACCAGCAAGAAGCTGAGAGA+AGG + chr7_1:7538795-7538814 None:intergenic 50.0%
! TCAGCTTCTTGCTGGTGCTA+TGG - chr7_1:7538799-7538818 Msa1007820:CDS 50.0%
! GGTGGTAAAGAGGATGATGG+TGG - chr7_1:7538875-7538894 Msa1007820:intron 50.0%
!! GATGATGGTGGGTCCCTTAA+TGG - chr7_1:7538887-7538906 Msa1007820:intron 50.0%
!! ATGGTGGGTCCCTTAATGGT+GGG - chr7_1:7538891-7538910 Msa1007820:intron 50.0%
GGCATGCATGACAGTAACAC+CGG - chr7_1:7539870-7539889 Msa1007820:intron 50.0%
CTGAGTGTCAGTTTCGTGTC+CGG + chr7_1:7539892-7539911 None:intergenic 50.0%
GGACACGACACTAACACATG+TGG + chr7_1:7539954-7539973 None:intergenic 50.0%
GACACTTCGCATTGAAAGCG+CGG + chr7_1:7539975-7539994 None:intergenic 50.0%
!!! TTGTGGTAGTTTTGGTGGGG+TGG - chr7_1:7540091-7540110 Msa1007820:intron 50.0%
CGCGAGTATATCCACCTCAA+GGG + chr7_1:7540942-7540961 None:intergenic 50.0%
GTTGGTGTGACATCCCAAAG+GGG + chr7_1:7541004-7541023 None:intergenic 50.0%
CTGTTGGTGTGACATCCCAA+AGG + chr7_1:7541006-7541025 None:intergenic 50.0%
!! CTTTGGGATGTCACACCAAC+AGG - chr7_1:7541004-7541023 Msa1007820:intron 50.0%
! ACACCAACAGGCTTTAGCTC+AGG - chr7_1:7541016-7541035 Msa1007820:intron 50.0%
CATGCAACCTGAATACCAGC+CGG - chr7_1:7541079-7541098 Msa1007820:intron 50.0%
TATGAGACCGGCTGGTATTC+AGG + chr7_1:7541089-7541108 None:intergenic 50.0%
CTCTACCAATCGTTCAGTGG+GGG + chr7_1:7541117-7541136 None:intergenic 50.0%
GCTCTACCAATCGTTCAGTG+GGG + chr7_1:7541118-7541137 None:intergenic 50.0%
CTGCTCTACCAATCGTTCAG+TGG + chr7_1:7541120-7541139 None:intergenic 50.0%
GGCTACAACTGGCGTAAGTA+TGG - chr7_1:7541290-7541309 Msa1007820:CDS 50.0%
GCGTAAGTATGGACAGAAGC+AGG - chr7_1:7541301-7541320 Msa1007820:CDS 50.0%
GTGCATTTGTAGTAGCTCCG+TGG + chr7_1:7541344-7541363 None:intergenic 50.0%
AAAGTTGAGCGTGCACCTGA+CGG - chr7_1:7541389-7541408 Msa1007820:CDS 50.0%
GAGGCTTCTCATGGTTATGC+TGG + chr7_1:7541442-7541461 None:intergenic 50.0%
GCATAACCATGAGAAGCCTC+AGG - chr7_1:7541442-7541461 Msa1007820:CDS 50.0%
TATTCGCCTGAGGCTTCTCA+TGG + chr7_1:7541451-7541470 None:intergenic 50.0%
ATGAGAAGCCTCAGGCGAAT+AGG - chr7_1:7541450-7541469 Msa1007820:CDS 50.0%
CTGACTCAAACTCACAAGGC+TGG - chr7_1:7541528-7541547 Msa1007820:CDS 50.0%
TTGGATGTCAGGTCACTCTC+AGG + chr7_1:7541608-7541627 None:intergenic 50.0%
TAGCCCCTTGATTGGATGTC+AGG + chr7_1:7541619-7541638 None:intergenic 50.0%
TGGTCTGATAGCCCCTTGAT+TGG + chr7_1:7541627-7541646 None:intergenic 50.0%
ACCTGGATCAAGTGAGAGTG+AGG - chr7_1:7541649-7541668 Msa1007820:CDS 50.0%
TCCTCACTCTCACTTGATCC+AGG + chr7_1:7541653-7541672 None:intergenic 50.0%
GTGAGCCAAACCCTAAGAGA+AGG - chr7_1:7541711-7541730 Msa1007820:CDS 50.0%
!! TTTCAGGAGCATTGAACCGG+CGG - chr7_1:7542121-7542140 Msa1007820:intron 50.0%
!! GTGACAGTCTTCTGAGATGG+AGG + chr7_1:7542158-7542177 None:intergenic 50.0%
GTGTGTGTGAGGGAGAGAAA+AGG + chr7_1:7542781-7542800 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGA+GGG + chr7_1:7542791-7542810 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+AGG + chr7_1:7542792-7542811 None:intergenic 50.0%
GGCACACAGAAGATTCTCAC+AGG + chr7_1:7543550-7543569 None:intergenic 50.0%
!!! ACCAAGGCCTGTGGTTTTGA+TGG + chr7_1:7544329-7544348 None:intergenic 50.0%
!! CATGTTTTTGCGGCGGGCTT+TGG + chr7_1:7538612-7538631 None:intergenic 55.0%
AATGCTTCAACGGAGGGACG+GGG + chr7_1:7538701-7538720 None:intergenic 55.0%
GAATGCTTCAACGGAGGGAC+GGG + chr7_1:7538702-7538721 None:intergenic 55.0%
!! GATGGTGGGTCCCTTAATGG+TGG - chr7_1:7538890-7538909 Msa1007820:intron 55.0%
CCAGAAGGACTCAAACCAGG+AGG + chr7_1:7538974-7538993 None:intergenic 55.0%
! CCTCCTGGTTTGAGTCCTTC+TGG - chr7_1:7538971-7538990 Msa1007820:intron 55.0%
GCGCGAGTATATCCACCTCA+AGG + chr7_1:7540943-7540962 None:intergenic 55.0%
GAGGTGGATATACTCGCGCA+AGG - chr7_1:7540944-7540963 Msa1007820:intron 55.0%
CAGTTGTAGCCGTCATCTGC+AGG + chr7_1:7541281-7541300 None:intergenic 55.0%
! CTGCAGATGACGGCTACAAC+TGG - chr7_1:7541279-7541298 Msa1007820:CDS 55.0%
AGAAGCCTCAGGCGAATAGG+CGG - chr7_1:7541453-7541472 Msa1007820:CDS 55.0%
CTCTCACTTGATCCAGGTCG+TGG + chr7_1:7541647-7541666 None:intergenic 55.0%
!! GGCTGCTGTTTCTAGCAGCA+GGG + chr7_1:7544280-7544299 None:intergenic 55.0%
!! TGGCTGCTGTTTCTAGCAGC+AGG + chr7_1:7544281-7544300 None:intergenic 55.0%
GCCATCAAAACCACAGGCCT+TGG - chr7_1:7544325-7544344 Msa1007820:CDS 55.0%
TTCTCTGGTACCAAGGCCTG+TGG + chr7_1:7544338-7544357 None:intergenic 55.0%
! AGGGTGCTTCTCTGGTACCA+AGG + chr7_1:7544345-7544364 None:intergenic 55.0%
!! GTTTTTGCGGCGGGCTTTGG+TGG + chr7_1:7538609-7538628 None:intergenic 60.0%
!! AGGTGGTGGTGGTGAGGTGT+CGG + chr7_1:7538657-7538676 None:intergenic 60.0%
ACTTCCAACGCCGTTAGCCC+TGG - chr7_1:7538725-7538744 Msa1007820:CDS 60.0%
GTGGGGGCTTCGTATGAGAC+CGG + chr7_1:7541101-7541120 None:intergenic 60.0%
CGAAGCCCCCACTGAACGAT+TGG - chr7_1:7541109-7541128 Msa1007820:intron 60.0%
TGAAGCTCCGGAGCAGCAAG+TGG - chr7_1:7541157-7541176 Msa1007820:intron 60.0%
GAAGCCTCAGGCGAATAGGC+GGG - chr7_1:7541454-7541473 Msa1007820:CDS 60.0%
TTGACCCGCCTATTCGCCTG+AGG + chr7_1:7541461-7541480 None:intergenic 60.0%
! GGCTCTGGTGGCGAAGAATC+AGG + chr7_1:7541587-7541606 None:intergenic 60.0%
! AGGTCACTCTCAGGCTCTGG+TGG + chr7_1:7541599-7541618 None:intergenic 60.0%
GTCAGGTCACTCTCAGGCTC+TGG + chr7_1:7541602-7541621 None:intergenic 60.0%
! GTCAAACGTGTCGGGCACTG+AGG - chr7_1:7541777-7541796 Msa1007820:CDS 60.0%
!! GGAGGTACTTCAGGAACCGC+CGG + chr7_1:7542140-7542159 None:intergenic 60.0%
! TTGCGGCGGGCTTTGGTGGT+TGG + chr7_1:7538605-7538624 None:intergenic 65.0%
!! TGAGGTGTCGGCGGAGGAAG+GGG + chr7_1:7538645-7538664 None:intergenic 65.0%
!! GTGAGGTGTCGGCGGAGGAA+GGG + chr7_1:7538646-7538665 None:intergenic 65.0%
!! TGGTGGTGGTGAGGTGTCGG+CGG + chr7_1:7538654-7538673 None:intergenic 65.0%
CTTCAACGGAGGGACGGGGT+GGG + chr7_1:7538697-7538716 None:intergenic 65.0%
AGGACCAGGGCTAACGGCGT+TGG + chr7_1:7538732-7538751 None:intergenic 65.0%
GGGCTTCGTATGAGACCGGC+TGG + chr7_1:7541097-7541116 None:intergenic 65.0%
! GGTGCTGCCACTTGCTGCTC+CGG + chr7_1:7541167-7541186 None:intergenic 65.0%
GGGGCTATCAGACCACGACC+TGG - chr7_1:7541632-7541651 Msa1007820:CDS 65.0%
! CGGCGGGCTTTGGTGGTTGG+TGG + chr7_1:7538602-7538621 None:intergenic 70.0%
!! GGTGAGGTGTCGGCGGAGGA+AGG + chr7_1:7538647-7538666 None:intergenic 70.0%
!! TGGTGGTGAGGTGTCGGCGG+AGG + chr7_1:7538651-7538670 None:intergenic 70.0%
! ATGGTGGGGCGAGGTGGTGG+TGG + chr7_1:7538668-7538687 None:intergenic 70.0%
!! GTGATGGTGGGGCGAGGTGG+TGG + chr7_1:7538671-7538690 None:intergenic 70.0%
!! AGGGTGATGGTGGGGCGAGG+TGG + chr7_1:7538674-7538693 None:intergenic 70.0%
! GGGGTGGGAGGGTGATGGTG+GGG + chr7_1:7538682-7538701 None:intergenic 70.0%
! CGGGGTGGGAGGGTGATGGT+GGG + chr7_1:7538683-7538702 None:intergenic 70.0%
! ACGGGGTGGGAGGGTGATGG+TGG + chr7_1:7538684-7538703 None:intergenic 70.0%
AACGGAGGGACGGGGTGGGA+GGG + chr7_1:7538693-7538712 None:intergenic 70.0%
GCTTCAACGGAGGGACGGGG+TGG + chr7_1:7538698-7538717 None:intergenic 70.0%
!! GGTGTCGGCGGAGGAAGGGG+TGG + chr7_1:7538642-7538661 None:intergenic 75.0%
!! GGGGCGAGGTGGTGGTGGTG+AGG + chr7_1:7538663-7538682 None:intergenic 75.0%
!! GGGAGGGTGATGGTGGGGCG+AGG + chr7_1:7538677-7538696 None:intergenic 75.0%
GGGACGGGGTGGGAGGGTGA+TGG + chr7_1:7538687-7538706 None:intergenic 75.0%
CAACGGAGGGACGGGGTGGG+AGG + chr7_1:7538694-7538713 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 7538540 7544445 7538540 ID=Msa1007820;Name=Msa1007820
chr7_1 mRNA 7538540 7544445 7538540 ID=Msa1007820-mRNA-1;Parent=Msa1007820;Name=Msa1007820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=89|0.33|0.25|1|1|1|4|0|524
chr7_1 exon 7538540 7538822 7538540 ID=Msa1007820-mRNA-1:exon:2286;Parent=Msa1007820-mRNA-1
chr7_1 exon 7540700 7540858 7540700 ID=Msa1007820-mRNA-1:exon:2285;Parent=Msa1007820-mRNA-1
chr7_1 exon 7541253 7541986 7541253 ID=Msa1007820-mRNA-1:exon:2284;Parent=Msa1007820-mRNA-1
chr7_1 exon 7543958 7544445 7543958 ID=Msa1007820-mRNA-1:exon:2283;Parent=Msa1007820-mRNA-1
chr7_1 five_prime_UTR 7544357 7544445 7544357 ID=Msa1007820-mRNA-1:five_prime_utr;Parent=Msa1007820-mRNA-1
chr7_1 CDS 7543958 7544356 7543958 ID=Msa1007820-mRNA-1:cds;Parent=Msa1007820-mRNA-1
chr7_1 CDS 7541253 7541986 7541253 ID=Msa1007820-mRNA-1:cds;Parent=Msa1007820-mRNA-1
chr7_1 CDS 7540700 7540858 7540700 ID=Msa1007820-mRNA-1:cds;Parent=Msa1007820-mRNA-1
chr7_1 CDS 7538540 7538822 7538540 ID=Msa1007820-mRNA-1:cds;Parent=Msa1007820-mRNA-1
Gene Sequence

>Msa1007820

ATGTCAACAACCACCCCTTCCTCCGCCGACACCTCACCACCACCACCTCGCCCCACCATCACCCTCCCACCCCGTCCCTCCGTTGAAGCATTCTTCACTTCCAACGCCGTTAGCCCTGGTCCTATGACACTTGTTTCAAGCTTCTTTGCAACTGAATCCGCCACCTTCTCTCAGCTTCTTGCTGGTGCTATGGCTTCACCTCTTGCTTTTTCTTCATCTTCTTCCCTTGCTGGTGAATATAGTTATGGTGGTAAAGAGGATGATGGTGGGTCCCTTAATGGTGGGTTTAAACAAAGTAGACCAATGAATTTGGTTATTGCTCGTTCTCCTGTTTTTACTGTTCCTCCTGGTTTGAGTCCTTCTGGTTTTCTTAACTCTCCTGGCTTTTTTTCACCTCAGAGCCCCTTTGGGATGTCACACCAACAGGCTTTAGCTCAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATAATATGCACATGCAACCTGAATACCAGCCGGTCTCATACGAAGCCCCCACTGAACGATTGGTAGAGCAGCCGTCTTATGCTCAAAATGAAGCTCCGGAGCAGCAAGTGGCAGCACCTGTATCAGAAGCTAGAAATGCTCAAATGGAAACGTCAGAGATTGCACATTCTGATAAGAAATACCAACCATCTTCCTTACCTATTGACAAACCTGCAGATGACGGCTACAACTGGCGTAAGTATGGACAGAAGCAGGTTAAAGGGAGCGAGTATCCACGGAGCTACTACAAATGCACACATCTGAATTGTCCCGTGAAGAAAAAAGTTGAGCGTGCACCTGACGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAGAAGCCTCAGGCGAATAGGCGGGTCAAAGAAAACAACAGTGACTTGAATGGAAATGCAAACGTTCAGCCTAAGTCTGACTCAAACTCACAAGGCTGGTTTGGAAATTCAGACAAAATTAGTGAGAGCGTGCCTGATTCTTCGCCACCAGAGCCTGAGAGTGACCTGACATCCAATCAAGGGGCTATCAGACCACGACCTGGATCAAGTGAGAGTGAGGAAGTCGGTAATGCAGAGAATAAGGAAGAGGGAGTTGACTGTGAGCCAAACCCTAAGAGAAGGAGCATTGAACCGGCGGTTCCTGAAGTACCTCCATCTCAGAAGACTGTCACAGAACCCAAAATTATTGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGATGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAGTGCACTAGTGCTGGGTGCAACGTGCGTAAACATGTTGAGAGAGCATCAACGGACCCAAAAGCTGTCATAACTACATACGAGGGAAAACATAATCATGATGTCCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTAGCAATTCAATGCCATCAAAACCACAGGCCTTGGTACCAGAGAAGCACCCTTTGCTTAAAGATATGGAGTTCGGAAACAATGACCAAAGACCTGTACATTTACGCTTGAAAGAAGAGCAAATCATTGTATAA
Protein sequence

>Msa1007820

MSTTTPSSADTSPPPPRPTITLPPRPSVEAFFTSNAVSPGPMTLVSSFFATESATFSQLLAGAMASPLAFSSSSSLAGEYSYGGKEDDGGSLNGGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHNMHMQPEYQPVSYEAPTERLVEQPSYAQNEAPEQQVAAPVSEARNAQMETSEIAHSDKKYQPSSLPIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKENNSDLNGNANVQPKSDSNSQGWFGNSDKISESVPDSSPPEPESDLTSNQGAIRPRPGSSESEEVGNAENKEEGVDCEPNPKRRSIEPAVPEVPPSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASSNSMPSKPQALVPEKHPLLKDMEFGNNDQRPVHLRLKEEQIIV*