AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0147980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147980 MtrunA17_Chr1g0157501 99.710 345 1 0 1 345 1 345 0.0 693
Msa0147980 MtrunA17_Chr5g0393381 79.179 341 70 1 5 344 7 347 0.0 532
Msa0147980 MtrunA17_Chr8g0383381 51.692 325 145 3 12 335 14 327 2.46e-106 315
Msa0147980 MtrunA17_Chr3g0129401 50.156 321 147 5 2 316 6 319 2.53e-104 309
Msa0147980 MtrunA17_Chr1g0201531 52.665 319 140 5 2 316 6 317 1.54e-101 301
Msa0147980 MtrunA17_Chr4g0028931 36.446 332 201 2 4 335 3 324 2.57e-66 213
Msa0147980 MtrunA17_Chr6g0467391 39.649 285 170 1 14 298 13 295 2.68e-65 209
Msa0147980 MtrunA17_Chr6g0467371 39.649 285 170 1 14 298 13 295 2.68e-65 209
Msa0147980 MtrunA17_Chr2g0326791 39.298 285 171 1 14 298 13 295 3.05e-65 210
Msa0147980 MtrunA17_Chr3g0128951 39.068 279 168 1 30 308 29 305 1.11e-61 201
Msa0147980 MtrunA17_Chr3g0128961 34.132 334 187 6 30 341 29 351 9.83e-53 178
Msa0147980 MtrunA17_Chr5g0446851 31.889 323 207 5 15 332 59 373 1.15e-27 111
Msa0147980 MtrunA17_Chr2g0298931 29.781 319 205 9 19 332 62 366 1.15e-25 105
Msa0147980 MtrunA17_Chr3g0114581 25.000 252 187 2 82 332 88 338 7.71e-17 80.5
Msa0147980 MtrunA17_Chr1g0160071 23.373 338 224 9 16 337 22 340 8.22e-15 74.3
Msa0147980 MtrunA17_Chr5g0436341 24.127 315 219 5 1 304 1 306 3.40e-12 66.2
Msa0147980 MtrunA17_Chr4g0008071 26.621 293 186 8 22 297 23 303 4.18e-12 66.2
Msa0147980 MtrunA17_Chr4g0056661 25.763 295 200 8 22 304 63 350 4.68e-12 66.2
Msa0147980 MtrunA17_Chr1g0149401 25.728 206 139 4 100 298 140 338 8.17e-12 65.5
Msa0147980 MtrunA17_Chr3g0112981 23.448 290 213 3 22 304 35 322 1.01e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147980 AT1G21070.1 79.883 343 69 0 2 344 5 347 0.0 559
Msa0147980 AT1G76670.2 79.883 343 68 1 2 344 5 346 0.0 549
Msa0147980 AT1G76670.1 79.883 343 68 1 2 344 5 346 0.0 549
Msa0147980 AT5G42420.1 77.746 346 74 2 2 344 4 349 0.0 541
Msa0147980 AT4G09810.1 51.713 321 142 5 2 316 6 319 1.38e-107 318
Msa0147980 AT1G34020.2 51.792 307 137 4 16 316 18 319 7.12e-103 306
Msa0147980 AT1G34020.1 51.792 307 137 4 16 316 18 319 7.12e-103 306
Msa0147980 AT1G34020.3 51.792 307 137 4 16 316 18 319 7.12e-103 306
Msa0147980 AT4G39390.1 48.137 322 162 3 3 321 10 329 2.92e-99 297
Msa0147980 AT4G39390.2 48.137 322 162 3 3 321 10 329 2.92e-99 297
Msa0147980 AT4G39390.3 48.137 322 162 3 3 321 6 325 3.16e-99 296
Msa0147980 AT5G42420.2 73.988 173 43 1 174 344 110 282 2.37e-88 267
Msa0147980 AT5G42420.2 79.245 106 21 1 2 106 4 109 2.76e-53 177
Msa0147980 AT4G09810.2 51.331 263 119 3 60 316 3 262 3.43e-87 264
Msa0147980 AT4G09810.3 53.982 226 100 2 2 227 6 227 3.31e-76 234
Msa0147980 AT2G28315.1 36.873 339 198 3 4 342 3 325 3.43e-67 215
Msa0147980 AT2G30460.1 39.157 332 176 3 3 322 2 319 4.30e-67 215
Msa0147980 AT2G30460.2 39.157 332 176 3 3 322 2 319 4.30e-67 215
Msa0147980 AT2G28315.2 39.661 295 176 1 4 298 3 295 5.67e-67 213
Msa0147980 AT1G06890.4 38.177 351 182 5 3 341 2 329 8.02e-66 212
Msa0147980 AT1G06890.3 38.177 351 182 5 3 341 2 329 9.19e-66 211
Msa0147980 AT1G06890.2 38.177 351 182 5 3 341 2 329 1.54e-65 211
Msa0147980 AT1G06890.1 38.177 351 182 5 3 341 2 329 1.54e-65 211
Msa0147980 AT2G30460.3 38.832 291 154 2 44 322 20 298 3.61e-63 204
Msa0147980 AT2G30460.6 38.832 291 154 2 44 322 20 298 3.61e-63 204
Msa0147980 AT2G30460.5 38.832 291 154 2 44 322 20 298 3.61e-63 204
Msa0147980 AT2G30460.4 38.667 225 136 1 3 227 2 224 4.43e-37 136
Msa0147980 AT5G55950.4 31.447 318 202 7 19 331 4 310 1.42e-32 124
Msa0147980 AT5G55950.1 31.447 318 202 7 19 331 64 370 2.99e-32 124
Msa0147980 AT5G57100.1 32.292 288 177 7 19 298 71 348 5.29e-29 115
Msa0147980 AT5G55950.3 30.068 296 193 6 41 331 6 292 1.42e-27 110
Msa0147980 AT5G57100.4 33.166 199 127 4 101 298 40 233 1.64e-21 93.2
Msa0147980 AT5G57100.2 31.224 237 147 5 19 248 71 298 1.95e-21 93.2
Msa0147980 AT5G55950.2 31.197 234 151 4 19 248 64 291 2.98e-21 92.8
Msa0147980 AT1G77610.1 24.138 319 215 8 16 320 17 322 1.24e-14 74.3
Msa0147980 AT5G57100.3 32.386 176 101 5 15 180 67 234 4.11e-14 72.0
Msa0147980 AT1G21870.1 24.269 342 227 13 7 332 14 339 2.30e-13 70.5
Msa0147980 AT1G12500.1 26.246 301 201 9 22 309 69 361 4.38e-12 67.0
Msa0147980 AT3G11320.1 23.793 290 212 3 22 304 21 308 1.49e-11 65.1
Msa0147980 AT5G05820.1 23.368 291 214 3 22 305 21 309 4.28e-11 63.5
Msa0147980 AT4G32272.1 24.771 218 143 6 88 298 135 338 5.08e-11 63.5
Msa0147980 AT4G32272.2 24.771 218 143 6 88 298 150 353 6.00e-11 63.5

Find 128 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTTGTGGGAGCTTATT+TGG 0.141842 1_4:-8106921 Msa0147980:CDS
GCTCTCTCTCTTATTATTCT+TGG 0.167279 1_4:-8105415 Msa0147980:CDS
CTTCTCAGCAGTTTCCTTCC+AGG 0.234608 1_4:-8105141 Msa0147980:CDS
AGAACGAGAGAATAAATAAA+AGG 0.283153 1_4:+8107457 None:intergenic
TCGGTCATGGTTGTGGTTAT+TGG 0.305025 1_4:-8106271 Msa0147980:CDS
ATTGTATTCAATTGCGATTA+CGG 0.315031 1_4:-8107342 Msa0147980:five_prime_UTR
AATGGTTATGCTTTCACTTT+CGG 0.319160 1_4:-8107150 Msa0147980:intron
AAAATTAAAATTGTTGGATA+AGG 0.330145 1_4:-8104821 Msa0147980:three_prime_UTR
ACATTATGTGTTCTGACTTT+GGG 0.331186 1_4:-8105101 Msa0147980:CDS
ACCAACTTTAAGATGTCTTC+TGG 0.333926 1_4:-8105355 Msa0147980:CDS
TGATGAGTTTGTTATTTGTT+TGG 0.345437 1_4:-8104630 Msa0147980:three_prime_UTR
CATCCCGGTGATAGATATAT+TGG 0.352609 1_4:+8106885 None:intergenic
AACGCAACTTGAATCAATTA+TGG 0.358686 1_4:-8107277 Msa0147980:exon
TTGGCTTGTCCGTGATTAAT+TGG 0.359542 1_4:-8104611 Msa0147980:three_prime_UTR
TTCTAAGCATGTTCCTTTGT+GGG 0.362172 1_4:-8106932 Msa0147980:CDS
CTTCTAAGCATGTTCCTTTG+TGG 0.365168 1_4:-8106933 Msa0147980:CDS
CTTTCGATCGGAAAGGGAAA+AGG 0.366317 1_4:+8107401 None:intergenic
GCCTAACAGAAGAAGAAATT+AGG 0.371713 1_4:-8104938 Msa0147980:CDS
CCATCGCATCGCTGGCTGGC+TGG 0.376723 1_4:+8107672 None:intergenic
GCCTAATTTCTTCTTCTGTT+AGG 0.377365 1_4:+8104937 None:intergenic
CGGCATGGTAATTTATAGTT+GGG 0.383718 1_4:-8105015 Msa0147980:CDS
CGATTTCTTTCGATCGGAAA+GGG 0.392587 1_4:+8107395 None:intergenic
CTGGCTGGCAGTGGCACACA+AGG 0.396310 1_4:+8107687 None:intergenic
ATCAAAACTAAGCATGATTC+CGG 0.401274 1_4:-8106353 Msa0147980:CDS
TGAGGGAGAGTCTTCGCATT+TGG 0.407601 1_4:+8104972 None:intergenic
AACATTATGTGTTCTGACTT+TGG 0.411202 1_4:-8105102 Msa0147980:CDS
GAAAGATATTGAACTTGGTC+AGG 0.413799 1_4:-8104883 Msa0147980:CDS
TTACCAGCGACTACTTTGAC+TGG 0.414974 1_4:-8107015 Msa0147980:intron
TCGGCATGGTAATTTATAGT+TGG 0.416121 1_4:-8105016 Msa0147980:CDS
ATGGTTGTGGTTATTGGTGT+TGG 0.416143 1_4:-8106265 Msa0147980:CDS
ACCACCATCGCATCGCTGGC+TGG 0.417955 1_4:+8107668 None:intergenic
TTGGATAAGGATTAGTATCA+AGG 0.418904 1_4:-8104808 Msa0147980:three_prime_UTR
CCGTTGAAAGATATTGAACT+TGG 0.422605 1_4:-8104888 Msa0147980:CDS
ATTGGTAGATGAACAATATG+AGG 0.437032 1_4:-8104593 Msa0147980:three_prime_UTR
AGTGAAAGCATAACCATTGT+TGG 0.439900 1_4:+8107155 None:intergenic
ATCGCAATTGAATACAATTA+CGG 0.440354 1_4:+8107347 None:intergenic
CACAGCAAGTAAACTAGAAA+AGG 0.447672 1_4:+8104755 None:intergenic
GGAAAGAAAGTAAGTGAGGA+GGG 0.449523 1_4:+8107478 None:intergenic
TTTGCTGTAACTGCTCTTGT+CGG 0.454803 1_4:-8106985 Msa0147980:CDS
GATTAGTATCAAGGTTATTG+TGG 0.456157 1_4:-8104799 Msa0147980:three_prime_UTR
TTGAGTAGTGTTTGCTGTGA+AGG 0.456859 1_4:+8106308 None:intergenic
ATGCTTAGAAGCAGAATAAC+CGG 0.461497 1_4:+8106945 None:intergenic
ATAAGAGAGAGAGCTTGAAT+AGG 0.463485 1_4:+8105424 None:intergenic
AGCGCCCAATGCAGAGGTAC+TGG 0.464687 1_4:+8105162 None:intergenic
GATGTAAATGTTAACTTCAA+AGG 0.465558 1_4:-8106226 Msa0147980:CDS
CATCGCTGGCTGGCTGGCAG+TGG 0.468862 1_4:+8107678 None:intergenic
GAGTTCCGTTGGAATTATCA+TGG 0.475175 1_4:-8107196 Msa0147980:CDS
GGAATGGTTCTTGCAGTTGT+CGG 0.475720 1_4:-8105035 Msa0147980:CDS
CCATTGTTGTGATAGTCAAT+CGG 0.479781 1_4:-8105502 Msa0147980:intron
GCCAGCCAGCGATGCGATGG+TGG 0.483163 1_4:-8107669 Msa0147980:five_prime_UTR
GAAATTAGGCTATTGAAGGA+AGG 0.484963 1_4:-8104924 Msa0147980:CDS
AGCCTCATGCTCAATTCCGT+TGG 0.485954 1_4:-8106856 Msa0147980:CDS
CTGAGATAGTAATCAACAAA+TGG 0.487131 1_4:+8105391 None:intergenic
TTTCGATCGGAAAGGGAAAA+GGG 0.490069 1_4:+8107402 None:intergenic
AGAAGAAATTAGGCTATTGA+AGG 0.492635 1_4:-8104928 Msa0147980:CDS
AAAGAAATCGACCTCAGATC+TGG 0.492639 1_4:-8107382 Msa0147980:five_prime_UTR
TAAGCCAGTACCTCTGCATT+GGG 0.493548 1_4:-8105166 Msa0147980:CDS
CGGTGGTTTGTGTGATGGAA+TGG 0.496976 1_4:-8106333 Msa0147980:CDS
TCACACCACCATCGCATCGC+TGG 0.497315 1_4:+8107664 None:intergenic
ACCAGAAGACATCTTAAAGT+TGG 0.497523 1_4:+8105354 None:intergenic
CCAGCCAGCCAGCGATGCGA+TGG 0.497702 1_4:-8107672 Msa0147980:five_prime_UTR
ATGTAAAATGTGTAAGCTGA+TGG 0.509910 1_4:-8104556 Msa0147980:three_prime_UTR
AAAAGGAAAGAAAGTAAGTG+AGG 0.515205 1_4:+8107474 None:intergenic
CACATTGAATTGATTTAGAG+AGG 0.518364 1_4:-8107597 Msa0147980:five_prime_UTR
ATGAACGTTGTGAGTTCCGT+TGG 0.518477 1_4:-8107207 Msa0147980:CDS
GTAAGCCAGTACCTCTGCAT+TGG 0.520697 1_4:-8105167 Msa0147980:CDS
CTACAAAAGAAATATTCGAT+TGG 0.521950 1_4:-8105475 Msa0147980:CDS
AATATCGAACTTTGGAGCAT+GGG 0.527661 1_4:-8107232 Msa0147980:CDS
GATTCCGGTGGTTTGTGTGA+TGG 0.533242 1_4:-8106338 Msa0147980:CDS
GGCTGGCAGTGGCACACAAG+GGG 0.534421 1_4:+8107689 None:intergenic
CCGATTTAAAACTGAACTGA+TGG 0.536082 1_4:+8107519 None:intergenic
TGATGATACAACTGCTACAC+AGG 0.539546 1_4:+8106192 None:intergenic
TTCACAGCAAACACTACTCA+AGG 0.539879 1_4:-8106306 Msa0147980:CDS
ACAATATGAGGGCACTATTG+TGG 0.542316 1_4:-8104581 Msa0147980:three_prime_UTR
TGAGGTCGATTTCTTTCGAT+CGG 0.544007 1_4:+8107389 None:intergenic
TTTACTTGCTGTGAAACTCT+CGG 0.545380 1_4:-8104745 Msa0147980:three_prime_UTR
CAATATCGAACTTTGGAGCA+TGG 0.548091 1_4:-8107233 Msa0147980:CDS
GACCTCAGATCTGGTGGTGG+TGG 0.548495 1_4:-8107373 Msa0147980:five_prime_UTR
TTTCAAGAACATCATGGGAA+TGG 0.549087 1_4:-8105051 Msa0147980:CDS
GTTGCCAATATATCTATCAC+CGG 0.550759 1_4:-8106889 Msa0147980:CDS
TCGTCAGCAATATCGAACTT+TGG 0.553664 1_4:-8107240 Msa0147980:CDS
TACCAGCGACTACTTTGACT+GGG 0.553992 1_4:-8107014 Msa0147980:intron
AATTAGGCTATTGAAGGAAG+GGG 0.554252 1_4:-8104922 Msa0147980:CDS
GGTTCTTGCAGTTGTCGGCA+TGG 0.555441 1_4:-8105030 Msa0147980:CDS
GGTAATTTATAGTTGGGCTG+TGG 0.556380 1_4:-8105009 Msa0147980:CDS
TCGATTTCTTTCGATCGGAA+AGG 0.556479 1_4:+8107394 None:intergenic
GAAAGTGTCGGTCATGGTTG+TGG 0.566114 1_4:-8106278 Msa0147980:CDS
CCAAGTTCAATATCTTTCAA+CGG 0.566323 1_4:+8104888 None:intergenic
GCTCACTTTCAAGAACATCA+TGG 0.566672 1_4:-8105057 Msa0147980:CDS
CTCACTTTCAAGAACATCAT+GGG 0.569962 1_4:-8105056 Msa0147980:CDS
AGGAAAGAAAGTAAGTGAGG+AGG 0.570153 1_4:+8107477 None:intergenic
AAATTAGGCTATTGAAGGAA+GGG 0.573519 1_4:-8104923 Msa0147980:CDS
TACATTACAAAACACAGCTA+AGG 0.580553 1_4:+8105187 None:intergenic
AAGAAAGTAAGTGAGGAGGG+AGG 0.582082 1_4:+8107481 None:intergenic
CGACGACATAAGTGATTGTG+AGG 0.588624 1_4:-8107561 Msa0147980:five_prime_UTR
ATCTATTAACAAACAAACAA+AGG 0.588663 1_4:+8107316 None:intergenic
GGAAGTGAAAGTGTCGGTCA+TGG 0.589747 1_4:-8106284 Msa0147980:CDS
TGGCTGGCAGTGGCACACAA+GGG 0.592003 1_4:+8107688 None:intergenic
ATTAGCCATGATAATTCCAA+CGG 0.593168 1_4:+8107191 None:intergenic
TATGTGTTCTGACTTTGGGG+TGG 0.604352 1_4:-8105097 Msa0147980:CDS
GACATAAGTGATTGTGAGGG+AGG 0.604621 1_4:-8107557 Msa0147980:five_prime_UTR
CTGAGAAGCGCCCAATGCAG+AGG 0.605531 1_4:+8105156 None:intergenic
ATTGAATTGATTTAGAGAGG+TGG 0.608450 1_4:-8107594 Msa0147980:five_prime_UTR
CATTATGTGTTCTGACTTTG+GGG 0.611362 1_4:-8105100 Msa0147980:CDS
GTTCATCTACCAATTAATCA+CGG 0.612869 1_4:+8104602 None:intergenic
CATGTGGCCTAAAACCTGGA+AGG 0.613117 1_4:+8105127 None:intergenic
GATTCTCACTCACACACAGA+TGG 0.613336 1_4:-8104846 Msa0147980:three_prime_UTR
ATCGACCTCAGATCTGGTGG+TGG 0.615281 1_4:-8107376 Msa0147980:five_prime_UTR
GAAAAGGAAATAATAAGAGT+CGG 0.627318 1_4:+8107759 None:intergenic
GGACTCGTCTCAAATGCTAC+CGG 0.630645 1_4:-8106964 Msa0147980:CDS
CATGAGGCTTAAGTTCATCC+CGG 0.630737 1_4:+8106870 None:intergenic
CATTCCATCACACAAACCAC+CGG 0.631892 1_4:+8106334 None:intergenic
TTGGTAGATGAACAATATGA+GGG 0.632448 1_4:-8104592 Msa0147980:three_prime_UTR
AAAACTAAGCATGATTCCGG+TGG 0.633913 1_4:-8106350 Msa0147980:CDS
TTTGTTGATTACTATCTCAG+TGG 0.635140 1_4:-8105388 Msa0147980:CDS
GATTCAAGTTGCGTTGCGTG+TGG 0.637370 1_4:+8107285 None:intergenic
GAAATCGACCTCAGATCTGG+TGG 0.637418 1_4:-8107379 Msa0147980:five_prime_UTR
TACCACCACCACCAGATCTG+AGG 0.640382 1_4:+8107371 None:intergenic
AAACAGCTTATGTCCAACAA+TGG 0.647240 1_4:-8107168 Msa0147980:CDS
TTGCCAATATATCTATCACC+GGG 0.654090 1_4:-8106888 Msa0147980:CDS
GCATACTTGGTAGAATCCAA+CGG 0.658976 1_4:+8106840 None:intergenic
TCACAGCAAACACTACTCAA+GGG 0.660525 1_4:-8106305 Msa0147980:CDS
ATCCAACGGAATTGAGCATG+AGG 0.660676 1_4:+8106854 None:intergenic
ATATCGAACTTTGGAGCATG+GGG 0.667111 1_4:-8107231 Msa0147980:CDS
CTCAAGGGAAGTGAAAGTGT+CGG 0.679931 1_4:-8106290 Msa0147980:CDS
GACGACATAAGTGATTGTGA+GGG 0.689489 1_4:-8107560 Msa0147980:five_prime_UTR
AACCAAATAAGCTCCCACAA+AGG 0.703411 1_4:+8106919 None:intergenic
ATGGTGGTGTGAGACAACAT+TGG 0.722291 1_4:-8107653 Msa0147980:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTCTTTTATTTTACTG+AGG + chr1_4:8104668-8104687 None:intergenic 15.0%
!!! GAAAATGAAAATTTTAAAAC+TGG + chr1_4:8105899-8105918 None:intergenic 15.0%
!! ATAATAGAAAAAGAAACATT+TGG - chr1_4:8106251-8106270 Msa0147980:CDS 15.0%
!!! AATAAATCTATTGATTTGTT+GGG + chr1_4:8106284-8106303 None:intergenic 15.0%
!!! TAATAAATCTATTGATTTGT+TGG + chr1_4:8106285-8106304 None:intergenic 15.0%
!!! AAAAAAAGAAGTTTGATTTA+AGG + chr1_4:8106692-8106711 None:intergenic 15.0%
!! AAAATTAAAATTGTTGGATA+AGG - chr1_4:8107472-8107491 Msa0147980:five_prime_UTR 15.0%
!!! TAAAGAAACATTTTCTAAAA+TGG + chr1_4:8107601-8107620 None:intergenic 15.0%
!! ATCTATTAACAAACAAACAA+AGG + chr1_4:8104980-8104999 None:intergenic 20.0%
!! ATGAAATGTGAAAAATGAAT+GGG + chr1_4:8105212-8105231 None:intergenic 20.0%
!! AATGAAATGTGAAAAATGAA+TGG + chr1_4:8105213-8105232 None:intergenic 20.0%
!!! AATGAAAATTTTAAAACTGG+AGG + chr1_4:8105896-8105915 None:intergenic 20.0%
!! AAAGGACATCTTAATATAAA+TGG + chr1_4:8106197-8106216 None:intergenic 20.0%
!! AATATAAATAACAGGAGAAA+AGG + chr1_4:8106215-8106234 None:intergenic 20.0%
!! AACACTTGAATATAAATAAC+AGG + chr1_4:8106223-8106242 None:intergenic 20.0%
!! AAAAAGAAACATTTGGTTAT+GGG - chr1_4:8106258-8106277 Msa0147980:CDS 20.0%
!!! CATCATTTTTATTCTTTTGA+AGG - chr1_4:8106405-8106424 Msa0147980:intron 20.0%
!! ACTATATATGCATATATTGT+TGG - chr1_4:8107027-8107046 Msa0147980:intron 20.0%
!! ATGGCAAAAATTAAAATTGT+TGG - chr1_4:8107466-8107485 Msa0147980:five_prime_UTR 20.0%
! GAAAAGGAAATAATAAGAGT+CGG + chr1_4:8104537-8104556 None:intergenic 25.0%
!! GACTCTTATTATTTCCTTTT+CGG - chr1_4:8104536-8104555 Msa0147980:three_prime_UTR 25.0%
! AGAACGAGAGAATAAATAAA+AGG + chr1_4:8104839-8104858 None:intergenic 25.0%
! ATCGCAATTGAATACAATTA+CGG + chr1_4:8104949-8104968 None:intergenic 25.0%
! ATTGTATTCAATTGCGATTA+CGG - chr1_4:8104951-8104970 Msa0147980:CDS 25.0%
! AGATTTAGAGATTAATGAGT+TGG - chr1_4:8105636-8105655 Msa0147980:intron 25.0%
! TGGTCTATGATAGAATATTA+TGG - chr1_4:8105671-8105690 Msa0147980:intron 25.0%
! GATGTAAATGTTAACTTCAA+AGG - chr1_4:8106067-8106086 Msa0147980:intron 25.0%
! GAAAAAGAAACATTTGGTTA+TGG - chr1_4:8106257-8106276 Msa0147980:CDS 25.0%
! ATGATTCTAAACCAGTAAAT+TGG - chr1_4:8106505-8106524 Msa0147980:intron 25.0%
!! TTCAGCATCTTTTATTATCT+TGG - chr1_4:8106602-8106621 Msa0147980:intron 25.0%
! AATTTAGAAATCAAACTGGT+TGG + chr1_4:8106657-8106676 None:intergenic 25.0%
! TGGTAATTTAGAAATCAAAC+TGG + chr1_4:8106661-8106680 None:intergenic 25.0%
!! TTTGATTTAAGGAAGAAACT+TGG + chr1_4:8106681-8106700 None:intergenic 25.0%
! AAAAAAATCAGGTATAGCAA+GGG + chr1_4:8106769-8106788 None:intergenic 25.0%
! AAAAAAAATCAGGTATAGCA+AGG + chr1_4:8106770-8106789 None:intergenic 25.0%
! CTACAAAAGAAATATTCGAT+TGG - chr1_4:8106818-8106837 Msa0147980:intron 25.0%
! TCTAGATTCAACACAAAAAA+AGG + chr1_4:8106982-8107001 None:intergenic 25.0%
!!! TGATGAGTTTGTTATTTGTT+TGG - chr1_4:8107663-8107682 Msa0147980:five_prime_UTR 25.0%
! CACATTGAATTGATTTAGAG+AGG - chr1_4:8104696-8104715 Msa0147980:three_prime_UTR 30.0%
! ATTGAATTGATTTAGAGAGG+TGG - chr1_4:8104699-8104718 Msa0147980:three_prime_UTR 30.0%
!!! CCATCAGTTCAGTTTTAAAT+CGG - chr1_4:8104774-8104793 Msa0147980:three_prime_UTR 30.0%
AAAAGGAAAGAAAGTAAGTG+AGG + chr1_4:8104822-8104841 None:intergenic 30.0%
AACGCAACTTGAATCAATTA+TGG - chr1_4:8105016-8105035 Msa0147980:CDS 30.0%
ATTAGCCATGATAATTCCAA+CGG + chr1_4:8105105-8105124 None:intergenic 30.0%
AATGGTTATGCTTTCACTTT+CGG - chr1_4:8105143-8105162 Msa0147980:CDS 30.0%
TCATTACTACAGAATCTACA+GGG + chr1_4:8105537-8105556 None:intergenic 30.0%
TATCATAGACCACCATATTT+CGG + chr1_4:8105663-8105682 None:intergenic 30.0%
ATCAAAACTAAGCATGATTC+CGG - chr1_4:8105940-8105959 Msa0147980:intron 30.0%
TCTTTACAGCAAATTGTAAG+TGG - chr1_4:8106124-8106143 Msa0147980:intron 30.0%
! GATCTAAAATGAACATTGAC+TGG + chr1_4:8106450-8106469 None:intergenic 30.0%
AAACAGACTTCATTGTTAAC+AGG - chr1_4:8106470-8106489 Msa0147980:intron 30.0%
AACAGACTTCATTGTTAACA+GGG - chr1_4:8106471-8106490 Msa0147980:intron 30.0%
CAATTACTTGACCAATTTAC+TGG + chr1_4:8106519-8106538 None:intergenic 30.0%
CAGTAAATTGGTCAAGTAAT+TGG - chr1_4:8106517-8106536 Msa0147980:intron 30.0%
AAACTTCCTGTGTTATATAC+CGG - chr1_4:8106718-8106737 Msa0147980:intron 30.0%
CAACAATGGGAAAAAAAATC+AGG + chr1_4:8106780-8106799 None:intergenic 30.0%
CTGAGATAGTAATCAACAAA+TGG + chr1_4:8106905-8106924 None:intergenic 30.0%
! TTTGTTGATTACTATCTCAG+TGG - chr1_4:8106905-8106924 Msa0147980:CDS 30.0%
AAAAAGGTGATCACTTACAA+TGG + chr1_4:8106966-8106985 None:intergenic 30.0%
! AGTGTCTTTTAAATTTCTGC+AGG - chr1_4:8107062-8107081 Msa0147980:intron 30.0%
TACATTACAAAACACAGCTA+AGG + chr1_4:8107109-8107128 None:intergenic 30.0%
! GAACACATAATGTTTTCATG+TGG + chr1_4:8107185-8107204 None:intergenic 30.0%
AACATTATGTGTTCTGACTT+TGG - chr1_4:8107191-8107210 Msa0147980:CDS 30.0%
ACATTATGTGTTCTGACTTT+GGG - chr1_4:8107192-8107211 Msa0147980:CDS 30.0%
AGAAGAAATTAGGCTATTGA+AGG - chr1_4:8107365-8107384 Msa0147980:five_prime_UTR 30.0%
AAATTAGGCTATTGAAGGAA+GGG - chr1_4:8107370-8107389 Msa0147980:five_prime_UTR 30.0%
CCAAGTTCAATATCTTTCAA+CGG + chr1_4:8107408-8107427 None:intergenic 30.0%
! TTGGATAAGGATTAGTATCA+AGG - chr1_4:8107485-8107504 Msa0147980:five_prime_UTR 30.0%
GATTAGTATCAAGGTTATTG+TGG - chr1_4:8107494-8107513 Msa0147980:five_prime_UTR 30.0%
GTTCATCTACCAATTAATCA+CGG + chr1_4:8107694-8107713 None:intergenic 30.0%
ATTGGTAGATGAACAATATG+AGG - chr1_4:8107700-8107719 Msa0147980:five_prime_UTR 30.0%
TTGGTAGATGAACAATATGA+GGG - chr1_4:8107701-8107720 Msa0147980:five_prime_UTR 30.0%
ATGTAAAATGTGTAAGCTGA+TGG - chr1_4:8107737-8107756 Msa0147980:five_prime_UTR 30.0%
!! TTTTTGTTTCGTCACCGAAA+AGG + chr1_4:8104553-8104572 None:intergenic 35.0%
! TTTTCGGTGACGAAACAAAA+AGG - chr1_4:8104552-8104571 Msa0147980:three_prime_UTR 35.0%
TGACGAAACAAAAAGGAGTT+TGG - chr1_4:8104559-8104578 Msa0147980:three_prime_UTR 35.0%
! CCGATTTAAAACTGAACTGA+TGG + chr1_4:8104777-8104796 None:intergenic 35.0%
!! AATATCGAACTTTGGAGCAT+GGG - chr1_4:8105061-8105080 Msa0147980:CDS 35.0%
AAACAGCTTATGTCCAACAA+TGG - chr1_4:8105125-8105144 Msa0147980:CDS 35.0%
! AGTGAAAGCATAACCATTGT+TGG + chr1_4:8105141-8105160 None:intergenic 35.0%
GTGAAAAATGAATGGGATCT+GGG + chr1_4:8105205-8105224 None:intergenic 35.0%
TGTGAAAAATGAATGGGATC+TGG + chr1_4:8105206-8105225 None:intergenic 35.0%
ATGCTTAGAAGCAGAATAAC+CGG + chr1_4:8105351-8105370 None:intergenic 35.0%
TTCTAAGCATGTTCCTTTGT+GGG - chr1_4:8105361-8105380 Msa0147980:CDS 35.0%
GTTGCCAATATATCTATCAC+CGG - chr1_4:8105404-8105423 Msa0147980:CDS 35.0%
TTGCCAATATATCTATCACC+GGG - chr1_4:8105405-8105424 Msa0147980:CDS 35.0%
AGATGAAAAGCAAGCATACT+TGG + chr1_4:8105469-8105488 None:intergenic 35.0%
GTCATTACTACAGAATCTAC+AGG + chr1_4:8105538-8105557 None:intergenic 35.0%
GTTTCTCTTATAGATTTCCC+AGG + chr1_4:8105607-8105626 None:intergenic 35.0%
! TAATGAGTTGGACCGAAATA+TGG - chr1_4:8105648-8105667 Msa0147980:intron 35.0%
TAAATTCCATATTGCCCACA+TGG + chr1_4:8106171-8106190 None:intergenic 35.0%
TTACAGACACATCTTTCATC+TGG - chr1_4:8106302-8106321 Msa0147980:CDS 35.0%
TACAGACACATCTTTCATCT+GGG - chr1_4:8106303-8106322 Msa0147980:CDS 35.0%
TTGAATTGAAGATGAGTGCT+AGG - chr1_4:8106349-8106368 Msa0147980:CDS 35.0%
ACAGACTTCATTGTTAACAG+GGG - chr1_4:8106472-8106491 Msa0147980:intron 35.0%
TGATTTCCGGTATATAACAC+AGG + chr1_4:8106727-8106746 None:intergenic 35.0%
CCAACAAATAGCATGATTTC+CGG + chr1_4:8106740-8106759 None:intergenic 35.0%
CGATTGACTATCACAACAAT+GGG + chr1_4:8106793-8106812 None:intergenic 35.0%
CCATTGTTGTGATAGTCAAT+CGG - chr1_4:8106791-8106810 Msa0147980:intron 35.0%
ATAAGAGAGAGAGCTTGAAT+AGG + chr1_4:8106872-8106891 None:intergenic 35.0%
GCTCTCTCTCTTATTATTCT+TGG - chr1_4:8106878-8106897 Msa0147980:CDS 35.0%
!! ACCAACTTTAAGATGTCTTC+TGG - chr1_4:8106938-8106957 Msa0147980:CDS 35.0%
ACCAGAAGACATCTTAAAGT+TGG + chr1_4:8106942-8106961 None:intergenic 35.0%
CATTATGTGTTCTGACTTTG+GGG - chr1_4:8107193-8107212 Msa0147980:CDS 35.0%
CTCACTTTCAAGAACATCAT+GGG - chr1_4:8107237-8107256 Msa0147980:CDS 35.0%
TTTCAAGAACATCATGGGAA+TGG - chr1_4:8107242-8107261 Msa0147980:CDS 35.0%
TCGGCATGGTAATTTATAGT+TGG - chr1_4:8107277-8107296 Msa0147980:exon 35.0%
CGGCATGGTAATTTATAGTT+GGG - chr1_4:8107278-8107297 Msa0147980:exon 35.0%
!!! TTAGGCTGTTTTTCGAATGA+GGG + chr1_4:8107341-8107360 None:intergenic 35.0%
GCCTAACAGAAGAAGAAATT+AGG - chr1_4:8107355-8107374 Msa0147980:five_prime_UTR 35.0%
GCCTAATTTCTTCTTCTGTT+AGG + chr1_4:8107359-8107378 None:intergenic 35.0%
GAAATTAGGCTATTGAAGGA+AGG - chr1_4:8107369-8107388 Msa0147980:five_prime_UTR 35.0%
AATTAGGCTATTGAAGGAAG+GGG - chr1_4:8107371-8107390 Msa0147980:five_prime_UTR 35.0%
CCGTTGAAAGATATTGAACT+TGG - chr1_4:8107405-8107424 Msa0147980:five_prime_UTR 35.0%
GAAAGATATTGAACTTGGTC+AGG - chr1_4:8107410-8107429 Msa0147980:five_prime_UTR 35.0%
CACAGCAAGTAAACTAGAAA+AGG + chr1_4:8107541-8107560 None:intergenic 35.0%
!! TTTACTTGCTGTGAAACTCT+CGG - chr1_4:8107548-8107567 Msa0147980:five_prime_UTR 35.0%
CGAAACAAAAAGGAGTTTGG+AGG - chr1_4:8104562-8104581 Msa0147980:three_prime_UTR 40.0%
GACGACATAAGTGATTGTGA+GGG - chr1_4:8104733-8104752 Msa0147980:three_prime_UTR 40.0%
GGAAAGAAAGTAAGTGAGGA+GGG + chr1_4:8104818-8104837 None:intergenic 40.0%
AGGAAAGAAAGTAAGTGAGG+AGG + chr1_4:8104819-8104838 None:intergenic 40.0%
TTTCGATCGGAAAGGGAAAA+GGG + chr1_4:8104894-8104913 None:intergenic 40.0%
CGATTTCTTTCGATCGGAAA+GGG + chr1_4:8104901-8104920 None:intergenic 40.0%
TCGATTTCTTTCGATCGGAA+AGG + chr1_4:8104902-8104921 None:intergenic 40.0%
! TGAGGTCGATTTCTTTCGAT+CGG + chr1_4:8104907-8104926 None:intergenic 40.0%
AAAGAAATCGACCTCAGATC+TGG - chr1_4:8104911-8104930 Msa0147980:CDS 40.0%
TCGTCAGCAATATCGAACTT+TGG - chr1_4:8105053-8105072 Msa0147980:CDS 40.0%
!! CAATATCGAACTTTGGAGCA+TGG - chr1_4:8105060-8105079 Msa0147980:CDS 40.0%
!! ATATCGAACTTTGGAGCATG+GGG - chr1_4:8105062-8105081 Msa0147980:CDS 40.0%
GAGTTCCGTTGGAATTATCA+TGG - chr1_4:8105097-8105116 Msa0147980:CDS 40.0%
GGTGCAGATCTAATGTAATG+AGG + chr1_4:8105184-8105203 None:intergenic 40.0%
! TTTGCTGTAACTGCTCTTGT+CGG - chr1_4:8105308-8105327 Msa0147980:intron 40.0%
CTTCTAAGCATGTTCCTTTG+TGG - chr1_4:8105360-8105379 Msa0147980:CDS 40.0%
TTCCTTTGTGGGAGCTTATT+TGG - chr1_4:8105372-8105391 Msa0147980:CDS 40.0%
AACCAAATAAGCTCCCACAA+AGG + chr1_4:8105377-8105396 None:intergenic 40.0%
CATCCCGGTGATAGATATAT+TGG + chr1_4:8105411-8105430 None:intergenic 40.0%
GCATACTTGGTAGAATCCAA+CGG + chr1_4:8105456-8105475 None:intergenic 40.0%
TCAATCCTTAACCCACTAAC+CGG + chr1_4:8105722-8105741 None:intergenic 40.0%
!! CTTCCTTTTAGAGACATGTG+CGG - chr1_4:8105789-8105808 Msa0147980:intron 40.0%
GAAAGTGAAAACACGAGAGT+AGG + chr1_4:8105862-8105881 None:intergenic 40.0%
AAAACTAAGCATGATTCCGG+TGG - chr1_4:8105943-8105962 Msa0147980:intron 40.0%
!! TTGAGTAGTGTTTGCTGTGA+AGG + chr1_4:8105988-8106007 None:intergenic 40.0%
TTCACAGCAAACACTACTCA+AGG - chr1_4:8105987-8106006 Msa0147980:intron 40.0%
TCACAGCAAACACTACTCAA+GGG - chr1_4:8105988-8106007 Msa0147980:intron 40.0%
ATGGTTGTGGTTATTGGTGT+TGG - chr1_4:8106028-8106047 Msa0147980:intron 40.0%
TGATGATACAACTGCTACAC+AGG + chr1_4:8106104-8106123 None:intergenic 40.0%
! CCGGAAATCATGCTATTTGT+TGG - chr1_4:8106737-8106756 Msa0147980:intron 40.0%
CCGATTGACTATCACAACAA+TGG + chr1_4:8106794-8106813 None:intergenic 40.0%
! TTTTCATGTGGCCTAAAACC+TGG + chr1_4:8107173-8107192 None:intergenic 40.0%
GCTCACTTTCAAGAACATCA+TGG - chr1_4:8107236-8107255 Msa0147980:CDS 40.0%
GGTAATTTATAGTTGGGCTG+TGG - chr1_4:8107284-8107303 Msa0147980:five_prime_UTR 40.0%
!!! GTTAGGCTGTTTTTCGAATG+AGG + chr1_4:8107342-8107361 None:intergenic 40.0%
!! TTGGCTTGTCCGTGATTAAT+TGG - chr1_4:8107682-8107701 Msa0147980:five_prime_UTR 40.0%
!! ACAATATGAGGGCACTATTG+TGG - chr1_4:8107712-8107731 Msa0147980:five_prime_UTR 40.0%
! ATGGTGGTGTGAGACAACAT+TGG - chr1_4:8104640-8104659 Msa0147980:three_prime_UTR 45.0%
CGACGACATAAGTGATTGTG+AGG - chr1_4:8104732-8104751 Msa0147980:three_prime_UTR 45.0%
GACATAAGTGATTGTGAGGG+AGG - chr1_4:8104736-8104755 Msa0147980:three_prime_UTR 45.0%
AAGAAAGTAAGTGAGGAGGG+AGG + chr1_4:8104815-8104834 None:intergenic 45.0%
CTTTCGATCGGAAAGGGAAA+AGG + chr1_4:8104895-8104914 None:intergenic 45.0%
ATGAACGTTGTGAGTTCCGT+TGG - chr1_4:8105086-8105105 Msa0147980:CDS 45.0%
TTACCAGCGACTACTTTGAC+TGG - chr1_4:8105278-8105297 Msa0147980:intron 45.0%
TACCAGCGACTACTTTGACT+GGG - chr1_4:8105279-8105298 Msa0147980:intron 45.0%
CATGAGGCTTAAGTTCATCC+CGG + chr1_4:8105426-8105445 None:intergenic 45.0%
ATCCAACGGAATTGAGCATG+AGG + chr1_4:8105442-8105461 None:intergenic 45.0%
! AGATTTCCCAGGTTTTCCAC+TGG + chr1_4:8105596-8105615 None:intergenic 45.0%
! TGAGTTGGACCGAAATATGG+TGG - chr1_4:8105651-8105670 Msa0147980:intron 45.0%
CTACCGCACATGTCTCTAAA+AGG + chr1_4:8105795-8105814 None:intergenic 45.0%
CATTCCATCACACAAACCAC+CGG + chr1_4:8105962-8105981 None:intergenic 45.0%
! CTCAAGGGAAGTGAAAGTGT+CGG - chr1_4:8106003-8106022 Msa0147980:intron 45.0%
TCGGTCATGGTTGTGGTTAT+TGG - chr1_4:8106022-8106041 Msa0147980:intron 45.0%
AATGTGTCTGTTCCACCATG+TGG - chr1_4:8106153-8106172 Msa0147980:intron 45.0%
ATGTGTCTGTTCCACCATGT+GGG - chr1_4:8106154-8106173 Msa0147980:intron 45.0%
ATTCCATATTGCCCACATGG+TGG + chr1_4:8106168-8106187 None:intergenic 45.0%
TGTTCATCAGCACTATTCGC+TGG + chr1_4:8106550-8106569 None:intergenic 45.0%
TAAGCCAGTACCTCTGCATT+GGG - chr1_4:8107127-8107146 Msa0147980:intron 45.0%
! GCAGTTTCCTTCCAGGTTTT+AGG - chr1_4:8107159-8107178 Msa0147980:CDS 45.0%
! TATGTGTTCTGACTTTGGGG+TGG - chr1_4:8107196-8107215 Msa0147980:CDS 45.0%
GGAATGGTTCTTGCAGTTGT+CGG - chr1_4:8107258-8107277 Msa0147980:CDS 45.0%
GATTCTCACTCACACACAGA+TGG - chr1_4:8107447-8107466 Msa0147980:five_prime_UTR 45.0%
GAAATCGACCTCAGATCTGG+TGG - chr1_4:8104914-8104933 Msa0147980:CDS 50.0%
!! GATTCAAGTTGCGTTGCGTG+TGG + chr1_4:8105011-8105030 None:intergenic 50.0%
AACCCAGTCAAAGTAGTCGC+TGG + chr1_4:8105284-8105303 None:intergenic 50.0%
GGACTCGTCTCAAATGCTAC+CGG - chr1_4:8105329-8105348 Msa0147980:intron 50.0%
AGCCTCATGCTCAATTCCGT+TGG - chr1_4:8105437-8105456 Msa0147980:CDS 50.0%
AGTCAGATCACTACAGCCAG+TGG - chr1_4:8105577-8105596 Msa0147980:intron 50.0%
ACTACAGCCAGTGGAAAACC+TGG - chr1_4:8105586-8105605 Msa0147980:intron 50.0%
CTACAGCCAGTGGAAAACCT+GGG - chr1_4:8105587-8105606 Msa0147980:intron 50.0%
! TTGATCCATGTAGCCGACTC+CGG - chr1_4:8105700-8105719 Msa0147980:intron 50.0%
CTTAACCCACTAACCGGAGT+CGG + chr1_4:8105716-8105735 None:intergenic 50.0%
! GATTCCGGTGGTTTGTGTGA+TGG - chr1_4:8105955-8105974 Msa0147980:intron 50.0%
! CGGTGGTTTGTGTGATGGAA+TGG - chr1_4:8105960-8105979 Msa0147980:intron 50.0%
!! GGAAGTGAAAGTGTCGGTCA+TGG - chr1_4:8106009-8106028 Msa0147980:intron 50.0%
!! GAAAGTGTCGGTCATGGTTG+TGG - chr1_4:8106015-8106034 Msa0147980:intron 50.0%
GTTCCACCATGTGGGCAATA+TGG - chr1_4:8106162-8106181 Msa0147980:intron 50.0%
GTAAGCCAGTACCTCTGCAT+TGG - chr1_4:8107126-8107145 Msa0147980:intron 50.0%
CTTCTCAGCAGTTTCCTTCC+AGG - chr1_4:8107152-8107171 Msa0147980:CDS 50.0%
CATGTGGCCTAAAACCTGGA+AGG + chr1_4:8107169-8107188 None:intergenic 50.0%
TGAGGGAGAGTCTTCGCATT+TGG + chr1_4:8107324-8107343 None:intergenic 50.0%
! GTGAGGAGGGAGGAGCTTTT+TGG + chr1_4:8104805-8104824 None:intergenic 55.0%
ATCGACCTCAGATCTGGTGG+TGG - chr1_4:8104917-8104936 Msa0147980:CDS 55.0%
TACCACCACCACCAGATCTG+AGG + chr1_4:8104925-8104944 None:intergenic 55.0%
ACTAACCGGAGTCGGCTACA+TGG + chr1_4:8105708-8105727 None:intergenic 55.0%
! ATGTAGCCGACTCCGGTTAG+TGG - chr1_4:8105707-8105726 Msa0147980:intron 55.0%
! TGTAGCCGACTCCGGTTAGT+GGG - chr1_4:8105708-8105727 Msa0147980:intron 55.0%
!! CGACTCCGGTTAGTGGGTTA+AGG - chr1_4:8105714-8105733 Msa0147980:intron 55.0%
GGTTCTTGCAGTTGTCGGCA+TGG - chr1_4:8107263-8107282 Msa0147980:exon 55.0%
TGGCTGGCAGTGGCACACAA+GGG + chr1_4:8104608-8104627 None:intergenic 60.0%
TCACACCACCATCGCATCGC+TGG + chr1_4:8104632-8104651 None:intergenic 60.0%
!! GACCTCAGATCTGGTGGTGG+TGG - chr1_4:8104920-8104939 Msa0147980:CDS 60.0%
! AGCGCCCAATGCAGAGGTAC+TGG + chr1_4:8107134-8107153 None:intergenic 60.0%
!! CTGAGAAGCGCCCAATGCAG+AGG + chr1_4:8107140-8107159 None:intergenic 60.0%
GGCTGGCAGTGGCACACAAG+GGG + chr1_4:8104607-8104626 None:intergenic 65.0%
CTGGCTGGCAGTGGCACACA+AGG + chr1_4:8104609-8104628 None:intergenic 65.0%
ACCACCATCGCATCGCTGGC+TGG + chr1_4:8104628-8104647 None:intergenic 65.0%
! CATCGCTGGCTGGCTGGCAG+TGG + chr1_4:8104618-8104637 None:intergenic 70.0%
! CCATCGCATCGCTGGCTGGC+TGG + chr1_4:8104624-8104643 None:intergenic 70.0%
CCAGCCAGCCAGCGATGCGA+TGG - chr1_4:8104621-8104640 Msa0147980:three_prime_UTR 70.0%
GCCAGCCAGCGATGCGATGG+TGG - chr1_4:8104624-8104643 Msa0147980:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 8104519 8107796 8104519 ID=Msa0147980;Name=Msa0147980
chr1_4 mRNA 8104519 8107796 8104519 ID=Msa0147980-mRNA-1;Parent=Msa0147980;Name=Msa0147980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=516|1|1|1|1|1|5|353|345
chr1_4 exon 8104519 8105231 8104519 ID=Msa0147980-mRNA-1:exon:3512;Parent=Msa0147980-mRNA-1
chr1_4 exon 8105348 8105509 8105348 ID=Msa0147980-mRNA-1:exon:3511;Parent=Msa0147980-mRNA-1
chr1_4 exon 8106177 8106377 8106177 ID=Msa0147980-mRNA-1:exon:3510;Parent=Msa0147980-mRNA-1
chr1_4 exon 8106846 8107030 8106846 ID=Msa0147980-mRNA-1:exon:3509;Parent=Msa0147980-mRNA-1
chr1_4 exon 8107151 8107796 8107151 ID=Msa0147980-mRNA-1:exon:3508;Parent=Msa0147980-mRNA-1
chr1_4 five_prime_UTR 8107281 8107796 8107281 ID=Msa0147980-mRNA-1:five_prime_utr;Parent=Msa0147980-mRNA-1
chr1_4 CDS 8107151 8107280 8107151 ID=Msa0147980-mRNA-1:cds;Parent=Msa0147980-mRNA-1
chr1_4 CDS 8106846 8107030 8106846 ID=Msa0147980-mRNA-1:cds;Parent=Msa0147980-mRNA-1
chr1_4 CDS 8106177 8106377 8106177 ID=Msa0147980-mRNA-1:cds;Parent=Msa0147980-mRNA-1
chr1_4 CDS 8105348 8105509 8105348 ID=Msa0147980-mRNA-1:cds;Parent=Msa0147980-mRNA-1
chr1_4 CDS 8104872 8105231 8104872 ID=Msa0147980-mRNA-1:cds;Parent=Msa0147980-mRNA-1
chr1_4 three_prime_UTR 8104519 8104871 8104519 ID=Msa0147980-mRNA-1:three_prime_utr;Parent=Msa0147980-mRNA-1
Gene Sequence

>Msa0147980

ATGGAGAGTGAAAAGAAATCGTCAGCAATATCGAACTTTGGAGCATGGGGTATGAACGTTGTGAGTTCCGTTGGAATTATCATGGCTAATAAACAGCTTATGTCCAACAATGGTTATGCTTTCACTTTCGCGACTACTTTGACTGGGTTTCACTTTGCTGTAACTGCTCTTGTCGGACTCGTCTCAAATGCTACCGGTTATTCTGCTTCTAAGCATGTTCCTTTGTGGGAGCTTATTTGGTTCTCTGCTGTTGCCAATATATCTATCACCGGGATGAACTTAAGCCTCATGCTCAATTCCGTTGGATTCTACCAAATATCAAAACTAAGCATGATTCCGGTGGTTTGTGTGATGGAATGGATCCTTCACAGCAAACACTACTCAAGGGAAGTGAAAGTGTCGGTCATGGTTGTGGTTATTGGTGTTGGTGTTTGCACTGTAACTGATGTAAATGTTAACTTCAAAGGTTTTGTGTGCGCCTGTGTAGCAGTTGTATCATCATCTTTACAGCAAATTTCAATCGGTTCTCTACAAAAGAAATATTCGATTGGATCTTTTGAACTGCTGAGTAAGACTGCTCCTATTCAAGCTCTCTCTCTTATTATTCTTGGTCCATTTGTTGATTACTATCTCAGTGGCAAGTTGATAACCAACTTTAAGATGTCTTCTGGTGCCATTGTTTTCATTCTTCTTTCATGCACCTTAGCTGTGTTTTGTAATGTAAGCCAGTACCTCTGCATTGGGCGCTTCTCAGCAGTTTCCTTCCAGGTTTTAGGCCACATGAAAACATTATGTGTTCTGACTTTGGGGTGGCTGTTATTCGATTCAGAGCTCACTTTCAAGAACATCATGGGAATGGTTCTTGCAGTTGTCGGCATGGTAATTTATAGTTGGGCTGTGGAGCTTGAAAAGCAGCCAAATGCGAAGACTCTCCCTCATTCGAAAAACAGCCTAACAGAAGAAGAAATTAGGCTATTGAAGGAAGGGGTAGAAAATAGTCCGTTGAAAGATATTGAACTTGGTCAGGCTAAAGTTTAG

Protein sequence

>Msa0147980

MESEKKSSAISNFGAWGMNVVSSVGIIMANKQLMSNNGYAFTFATTLTGFHFAVTALVGLVSNATGYSASKHVPLWELIWFSAVANISITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHSKHYSREVKVSVMVVVIGVGVCTVTDVNVNFKGFVCACVAVVSSSLQQISIGSLQKKYSIGSFELLSKTAPIQALSLIILGPFVDYYLSGKLITNFKMSSGAIVFILLSCTLAVFCNVSQYLCIGRFSAVSFQVLGHMKTLCVLTLGWLLFDSELTFKNIMGMVLAVVGMVIYSWAVELEKQPNAKTLPHSKNSLTEEEIRLLKEGVENSPLKDIELGQAKV*