Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386710 | XP_003594276.1 | 99.005 | 201 | 2 | 0 | 1 | 201 | 1 | 201 | 1.09e-140 | 400 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386710 | sp|A7R385|CSPLC_VITVI | 78.462 | 195 | 42 | 0 | 1 | 195 | 1 | 195 | 2.07e-105 | 304 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386710 | G7IPB7 | 99.005 | 201 | 2 | 0 | 1 | 201 | 1 | 201 | 5.22e-141 | 400 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001450 | Msa1386710 | 0.807164 | 5.778144e-50 | -8.615850e-47 |
Msa0002680 | Msa1386710 | 0.807996 | 3.846245e-50 | -8.615850e-47 |
Msa0002710 | Msa1386710 | 0.802348 | 5.853642e-49 | -8.615850e-47 |
Msa0003720 | Msa1386710 | 0.834484 | 2.919196e-56 | -8.615850e-47 |
Msa0004540 | Msa1386710 | 0.818176 | 2.247160e-52 | -8.615850e-47 |
Msa0007970 | Msa1386710 | 0.826651 | 2.413986e-54 | -8.615850e-47 |
Msa0011930 | Msa1386710 | 0.809065 | 2.275174e-50 | -8.615850e-47 |
Msa0012940 | Msa1386710 | 0.812076 | 5.084605e-51 | -8.615850e-47 |
Msa0014570 | Msa1386710 | 0.838961 | 2.106341e-57 | -8.615850e-47 |
Msa0015120 | Msa1386710 | 0.806625 | 7.512367e-50 | -8.615850e-47 |
Msa0022010 | Msa1386710 | 0.816709 | 4.807768e-52 | -8.615850e-47 |
Msa0024710 | Msa1386710 | 0.801211 | 1.002104e-48 | -8.615850e-47 |
Msa0027820 | Msa1386710 | 0.811357 | 7.289988e-51 | -8.615850e-47 |
Msa0032320 | Msa1386710 | 0.809342 | 1.984353e-50 | -8.615850e-47 |
Msa0032920 | Msa1386710 | -0.837628 | 4.647505e-57 | -8.615850e-47 |
Msa0032960 | Msa1386710 | -0.805199 | 1.498091e-49 | -8.615850e-47 |
Msa0033110 | Msa1386710 | 0.809129 | 2.204204e-50 | -8.615850e-47 |
Msa0033260 | Msa1386710 | 0.803492 | 3.397086e-49 | -8.615850e-47 |
Msa0033880 | Msa1386710 | 0.807018 | 6.204659e-50 | -8.615850e-47 |
Msa0036130 | Msa1386710 | 0.815362 | 9.609251e-52 | -8.615850e-47 |
Msa0039250 | Msa1386710 | 0.800115 | 1.676632e-48 | -8.615850e-47 |
Msa0039900 | Msa1386710 | -0.828335 | 9.518268e-55 | -8.615850e-47 |
Msa0040690 | Msa1386710 | 0.808873 | 2.500285e-50 | -8.615850e-47 |
Msa0048180 | Msa1386710 | 0.823117 | 1.646327e-53 | -8.615850e-47 |
Msa0052610 | Msa1386710 | 0.819416 | 1.174885e-52 | -8.615850e-47 |
Msa0057710 | Msa1386710 | 0.805816 | 1.112089e-49 | -8.615850e-47 |
Msa0061340 | Msa1386710 | 0.801042 | 1.085005e-48 | -8.615850e-47 |
Msa0063890 | Msa1386710 | 0.807906 | 4.020978e-50 | -8.615850e-47 |
Msa0064290 | Msa1386710 | 0.808329 | 3.267394e-50 | -8.615850e-47 |
Msa0065680 | Msa1386710 | -0.806217 | 9.158591e-50 | -8.615850e-47 |
Msa0067870 | Msa1386710 | 0.807411 | 5.122219e-50 | -8.615850e-47 |
Msa0075170 | Msa1386710 | 0.815902 | 7.286751e-52 | -8.615850e-47 |
Msa0081520 | Msa1386710 | 0.845634 | 3.592915e-59 | -8.615850e-47 |
Msa0081650 | Msa1386710 | 0.806693 | 7.267999e-50 | -8.615850e-47 |
Msa0090520 | Msa1386710 | 0.825720 | 4.018738e-54 | -8.615850e-47 |
Msa0093850 | Msa1386710 | 0.864565 | 1.109595e-64 | -8.615850e-47 |
Msa0094580 | Msa1386710 | 0.838499 | 2.773743e-57 | -8.615850e-47 |
Msa0094850 | Msa1386710 | 0.813304 | 2.738665e-51 | -8.615850e-47 |
Msa0097850 | Msa1386710 | 0.824517 | 7.731359e-54 | -8.615850e-47 |
Msa0101270 | Msa1386710 | 0.808510 | 2.988821e-50 | -8.615850e-47 |
Msa0101440 | Msa1386710 | 0.807423 | 5.090922e-50 | -8.615850e-47 |
Msa0103240 | Msa1386710 | 0.815853 | 7.473597e-52 | -8.615850e-47 |
Msa0106710 | Msa1386710 | 0.804703 | 1.902352e-49 | -8.615850e-47 |
Msa0108390 | Msa1386710 | 0.806071 | 9.830772e-50 | -8.615850e-47 |
Msa0116790 | Msa1386710 | 0.804118 | 2.518228e-49 | -8.615850e-47 |
Msa1345100 | Msa1386710 | 0.811216 | 7.822384e-51 | -8.615850e-47 |
Msa1348090 | Msa1386710 | 0.803277 | 3.764701e-49 | -8.615850e-47 |
Msa1353470 | Msa1386710 | 0.800823 | 1.202931e-48 | -8.615850e-47 |
Msa1353980 | Msa1386710 | 0.821872 | 3.204303e-53 | -8.615850e-47 |
Msa1356830 | Msa1386710 | 0.823574 | 1.287141e-53 | -8.615850e-47 |
Msa1358480 | Msa1386710 | 0.821455 | 4.000585e-53 | -8.615850e-47 |
Msa1360980 | Msa1386710 | 0.869169 | 3.786770e-66 | -8.615850e-47 |
Msa1361400 | Msa1386710 | 0.837699 | 4.455815e-57 | -8.615850e-47 |
Msa1361410 | Msa1386710 | 0.817560 | 3.095458e-52 | -8.615850e-47 |
Msa1363330 | Msa1386710 | 0.829560 | 4.809003e-55 | -8.615850e-47 |
Msa1369150 | Msa1386710 | 0.822123 | 2.803251e-53 | -8.615850e-47 |
Msa1371520 | Msa1386710 | 0.822260 | 2.605044e-53 | -8.615850e-47 |
Msa1373100 | Msa1386710 | 0.849037 | 4.180870e-60 | -8.615850e-47 |
Msa1373820 | Msa1386710 | 0.805322 | 1.411515e-49 | -8.615850e-47 |
Msa1374060 | Msa1386710 | 0.817129 | 3.870449e-52 | -8.615850e-47 |
Msa1375460 | Msa1386710 | 0.806577 | 7.687554e-50 | -8.615850e-47 |
Msa1376090 | Msa1386710 | -0.813786 | 2.146274e-51 | -8.615850e-47 |
Msa1377540 | Msa1386710 | -0.820104 | 8.182208e-53 | -8.615850e-47 |
Msa1382560 | Msa1386710 | 0.829129 | 6.119292e-55 | -8.615850e-47 |
Msa1384870 | Msa1386710 | 0.812476 | 4.159524e-51 | -8.615850e-47 |
Msa1385890 | Msa1386710 | 0.853464 | 2.348133e-61 | -8.615850e-47 |
Msa1386600 | Msa1386710 | 0.830028 | 3.697879e-55 | -8.615850e-47 |
Msa1386710 | Msa1400610 | -0.806821 | 6.827649e-50 | -8.615850e-47 |
Msa1386710 | Msa1416370 | 0.801176 | 1.018629e-48 | -8.615850e-47 |
Msa1386710 | Msa1418240 | 0.803097 | 4.102090e-49 | -8.615850e-47 |
Msa1386710 | Msa1422950 | 0.849074 | 4.083217e-60 | -8.615850e-47 |
Msa1386710 | Msa1423350 | 0.846848 | 1.678159e-59 | -8.615850e-47 |
Msa1386710 | Msa1425880 | 0.818484 | 1.913745e-52 | -8.615850e-47 |
Msa1386710 | Msa1432500 | 0.801603 | 8.330471e-49 | -8.615850e-47 |
Msa1386710 | Msa1437940 | 0.827364 | 1.629798e-54 | -8.615850e-47 |
Msa1386710 | Msa1438050 | 0.801011 | 1.101202e-48 | -8.615850e-47 |
Msa1386710 | Msa1439610 | 0.818376 | 2.024751e-52 | -8.615850e-47 |
Msa1386710 | Msa1440310 | 0.840430 | 8.737545e-58 | -8.615850e-47 |
Msa1386710 | Msa1440960 | 0.818449 | 1.949295e-52 | -8.615850e-47 |
Msa1386710 | Msa1443930 | 0.836296 | 1.016963e-56 | -8.615850e-47 |
Msa1386710 | Msa1444510 | 0.823348 | 1.453621e-53 | -8.615850e-47 |
Msa1386710 | Msa1445190 | 0.802780 | 4.769426e-49 | -8.615850e-47 |
Msa1386710 | Msa1445390 | -0.818659 | 1.746532e-52 | -8.615850e-47 |
Msa1386710 | Msa1446810 | 0.815414 | 9.360489e-52 | -8.615850e-47 |
Msa1386710 | Msa1446820 | 0.806897 | 6.581045e-50 | -8.615850e-47 |
Msa1386710 | Msa1449340 | -0.825704 | 4.054352e-54 | -8.615850e-47 |
Msa1386710 | Msa1451160 | 0.844293 | 8.269857e-59 | -8.615850e-47 |
Msa1386710 | Msa1464810 | 0.819319 | 1.236233e-52 | -8.615850e-47 |
Msa0607520 | Msa1386710 | 0.821681 | 3.548367e-53 | -8.615850e-47 |
Msa0614000 | Msa1386710 | 0.832634 | 8.452728e-56 | -8.615850e-47 |
Msa0614930 | Msa1386710 | 0.814325 | 1.632085e-51 | -8.615850e-47 |
Msa0615420 | Msa1386710 | 0.821377 | 4.170138e-53 | -8.615850e-47 |
Msa0615440 | Msa1386710 | 0.814373 | 1.592809e-51 | -8.615850e-47 |
Msa0618950 | Msa1386710 | 0.803299 | 3.724225e-49 | -8.615850e-47 |
Msa0620620 | Msa1386710 | 0.803015 | 4.265162e-49 | -8.615850e-47 |
Msa0623330 | Msa1386710 | 0.834311 | 3.225049e-56 | -8.615850e-47 |
Msa0626450 | Msa1386710 | 0.829391 | 5.285319e-55 | -8.615850e-47 |
Msa0626490 | Msa1386710 | 0.833210 | 6.078837e-56 | -8.615850e-47 |
Msa0626510 | Msa1386710 | 0.826532 | 2.576354e-54 | -8.615850e-47 |
Msa0628420 | Msa1386710 | 0.810786 | 9.691355e-51 | -8.615850e-47 |
Msa0638480 | Msa1386710 | 0.876112 | 1.809399e-68 | -8.615850e-47 |
Msa0642880 | Msa1386710 | 0.802766 | 4.799834e-49 | -8.615850e-47 |
Msa0658960 | Msa1386710 | 0.826836 | 2.179967e-54 | -8.615850e-47 |
Msa0662340 | Msa1386710 | 0.806067 | 9.849954e-50 | -8.615850e-47 |
Msa0664600 | Msa1386710 | 0.830571 | 2.724686e-55 | -8.615850e-47 |
Msa0664910 | Msa1386710 | 0.839135 | 1.898761e-57 | -8.615850e-47 |
Msa0666230 | Msa1386710 | 0.806249 | 9.014276e-50 | -8.615850e-47 |
Msa0667770 | Msa1386710 | 0.800297 | 1.540057e-48 | -8.615850e-47 |
Msa0667790 | Msa1386710 | 0.813844 | 2.084107e-51 | -8.615850e-47 |
Msa0669520 | Msa1386710 | 0.817218 | 3.695816e-52 | -8.615850e-47 |
Msa0679700 | Msa1386710 | 0.801913 | 7.195623e-49 | -8.615850e-47 |
Msa0692880 | Msa1386710 | 0.800722 | 1.261165e-48 | -8.615850e-47 |
Msa0697160 | Msa1386710 | 0.830259 | 3.247603e-55 | -8.615850e-47 |
Msa0698490 | Msa1386710 | 0.812937 | 3.297689e-51 | -8.615850e-47 |
Msa0698640 | Msa1386710 | 0.814191 | 1.746773e-51 | -8.615850e-47 |
Msa0698660 | Msa1386710 | 0.808800 | 2.591873e-50 | -8.615850e-47 |
Msa0698800 | Msa1386710 | 0.809588 | 1.756922e-50 | -8.615850e-47 |
Msa0703680 | Msa1386710 | 0.818798 | 1.624292e-52 | -8.615850e-47 |
Msa0704660 | Msa1386710 | 0.802444 | 5.593783e-49 | -8.615850e-47 |
Msa0710800 | Msa1386710 | 0.825504 | 4.521613e-54 | -8.615850e-47 |
Msa0711430 | Msa1386710 | 0.803247 | 3.818172e-49 | -8.615850e-47 |
Msa0716410 | Msa1386710 | 0.819202 | 1.314561e-52 | -8.615850e-47 |
Msa0755150 | Msa1386710 | 0.805338 | 1.400794e-49 | -8.615850e-47 |
Msa0755330 | Msa1386710 | 0.810442 | 1.150231e-50 | -8.615850e-47 |
Msa0762970 | Msa1386710 | 0.800138 | 1.658974e-48 | -8.615850e-47 |
Msa0766930 | Msa1386710 | 0.818859 | 1.573376e-52 | -8.615850e-47 |
Msa0784380 | Msa1386710 | 0.814495 | 1.496655e-51 | -8.615850e-47 |
Msa0788770 | Msa1386710 | 0.808870 | 2.504655e-50 | -8.615850e-47 |
Msa0790610 | Msa1386710 | 0.831833 | 1.333923e-55 | -8.615850e-47 |
Msa0799000 | Msa1386710 | 0.811535 | 6.670393e-51 | -8.615850e-47 |
Msa0800270 | Msa1386710 | 0.805740 | 1.153886e-49 | -8.615850e-47 |
Msa0807280 | Msa1386710 | 0.824310 | 8.652211e-54 | -8.615850e-47 |
Msa0807820 | Msa1386710 | 0.834160 | 3.518540e-56 | -8.615850e-47 |
Msa0808800 | Msa1386710 | 0.819447 | 1.155622e-52 | -8.615850e-47 |
Msa0822310 | Msa1386710 | -0.816156 | 6.393794e-52 | -8.615850e-47 |
Msa0828560 | Msa1386710 | 0.824221 | 9.077324e-54 | -8.615850e-47 |
Msa0832120 | Msa1386710 | 0.812654 | 3.801866e-51 | -8.615850e-47 |
Msa0833190 | Msa1386710 | -0.814679 | 1.362828e-51 | -8.615850e-47 |
Msa0838260 | Msa1386710 | 0.800277 | 1.554105e-48 | -8.615850e-47 |
Msa0123510 | Msa1386710 | 0.805843 | 1.097817e-49 | -8.615850e-47 |
Msa0125770 | Msa1386710 | 0.806194 | 9.261880e-50 | -8.615850e-47 |
Msa0127850 | Msa1386710 | 0.817064 | 4.001812e-52 | -8.615850e-47 |
Msa0128860 | Msa1386710 | 0.803578 | 3.260570e-49 | -8.615850e-47 |
Msa0130240 | Msa1386710 | 0.845997 | 2.862992e-59 | -8.615850e-47 |
Msa0131330 | Msa1386710 | 0.834393 | 3.076977e-56 | -8.615850e-47 |
Msa0136070 | Msa1386710 | 0.811658 | 6.270586e-51 | -8.615850e-47 |
Msa0136100 | Msa1386710 | 0.812215 | 4.742731e-51 | -8.615850e-47 |
Msa0137990 | Msa1386710 | 0.826167 | 3.146836e-54 | -8.615850e-47 |
Msa0138360 | Msa1386710 | 0.836780 | 7.658319e-57 | -8.615850e-47 |
Msa0140500 | Msa1386710 | -0.817523 | 3.155641e-52 | -8.615850e-47 |
Msa0144360 | Msa1386710 | 0.809095 | 2.241491e-50 | -8.615850e-47 |
Msa0145580 | Msa1386710 | 0.804638 | 1.961986e-49 | -8.615850e-47 |
Msa0146280 | Msa1386710 | 0.815007 | 1.152730e-51 | -8.615850e-47 |
Msa0147980 | Msa1386710 | 0.829507 | 4.953541e-55 | -8.615850e-47 |
Msa0152400 | Msa1386710 | 0.802260 | 6.103519e-49 | -8.615850e-47 |
Msa0154440 | Msa1386710 | 0.830681 | 2.561450e-55 | -8.615850e-47 |
Msa0166460 | Msa1386710 | 0.805102 | 1.569778e-49 | -8.615850e-47 |
Msa0167480 | Msa1386710 | 0.801046 | 1.083077e-48 | -8.615850e-47 |
Msa0168500 | Msa1386710 | 0.814013 | 1.912116e-51 | -8.615850e-47 |
Msa0173890 | Msa1386710 | 0.854475 | 1.201233e-61 | -8.615850e-47 |
Msa0174320 | Msa1386710 | 0.802864 | 4.581617e-49 | -8.615850e-47 |
Msa0174730 | Msa1386710 | 0.803519 | 3.354460e-49 | -8.615850e-47 |
Msa0181230 | Msa1386710 | 0.800200 | 1.611179e-48 | -8.615850e-47 |
Msa0183900 | Msa1386710 | 0.815711 | 8.035891e-52 | -8.615850e-47 |
Msa0188350 | Msa1386710 | 0.834276 | 3.290557e-56 | -8.615850e-47 |
Msa0188890 | Msa1386710 | 0.826423 | 2.734941e-54 | -8.615850e-47 |
Msa0189300 | Msa1386710 | 0.802404 | 5.701728e-49 | -8.615850e-47 |
Msa0192480 | Msa1386710 | 0.801780 | 7.660022e-49 | -8.615850e-47 |
Msa0199520 | Msa1386710 | 0.801515 | 8.684421e-49 | -8.615850e-47 |
Msa0204960 | Msa1386710 | 0.800501 | 1.399515e-48 | -8.615850e-47 |
Msa0206690 | Msa1386710 | 0.816926 | 4.298862e-52 | -8.615850e-47 |
Msa0207350 | Msa1386710 | 0.803871 | 2.834400e-49 | -8.615850e-47 |
Msa0211150 | Msa1386710 | 0.820368 | 7.115898e-53 | -8.615850e-47 |
Msa0214550 | Msa1386710 | 0.819381 | 1.196675e-52 | -8.615850e-47 |
Msa0221000 | Msa1386710 | 0.851871 | 6.690946e-61 | -8.615850e-47 |
Msa0222620 | Msa1386710 | 0.812253 | 4.653616e-51 | -8.615850e-47 |
Msa0223080 | Msa1386710 | 0.804593 | 2.005213e-49 | -8.615850e-47 |
Msa0223230 | Msa1386710 | 0.802607 | 5.178544e-49 | -8.615850e-47 |
Msa0225100 | Msa1386710 | 0.802709 | 4.932835e-49 | -8.615850e-47 |
Msa0226460 | Msa1386710 | 0.810187 | 1.305933e-50 | -8.615850e-47 |
Msa0229170 | Msa1386710 | 0.814064 | 1.863363e-51 | -8.615850e-47 |
Msa0230150 | Msa1386710 | 0.814369 | 1.595527e-51 | -8.615850e-47 |
Msa0231100 | Msa1386710 | 0.802361 | 5.818780e-49 | -8.615850e-47 |
Msa0231380 | Msa1386710 | 0.837530 | 4.922216e-57 | -8.615850e-47 |
Msa0233730 | Msa1386710 | 0.820720 | 5.908561e-53 | -8.615850e-47 |
Msa1224840 | Msa1386710 | 0.800662 | 1.297497e-48 | -8.615850e-47 |
Msa1226470 | Msa1386710 | 0.801514 | 8.686078e-49 | -8.615850e-47 |
Msa1227460 | Msa1386710 | 0.818935 | 1.511918e-52 | -8.615850e-47 |
Msa1235250 | Msa1386710 | 0.836501 | 9.017174e-57 | -8.615850e-47 |
Msa1238930 | Msa1386710 | 0.806465 | 8.120309e-50 | -8.615850e-47 |
Msa1239920 | Msa1386710 | 0.802113 | 6.544492e-49 | -8.615850e-47 |
Msa1245940 | Msa1386710 | -0.803743 | 3.013741e-49 | -8.615850e-47 |
Msa1251160 | Msa1386710 | 0.805219 | 1.483842e-49 | -8.615850e-47 |
Msa1253550 | Msa1386710 | 0.800965 | 1.125031e-48 | -8.615850e-47 |
Msa1256850 | Msa1386710 | 0.808149 | 3.569638e-50 | -8.615850e-47 |
Msa1259070 | Msa1386710 | -0.808866 | 2.509610e-50 | -8.615850e-47 |
Msa1262890 | Msa1386710 | 0.823056 | 1.700668e-53 | -8.615850e-47 |
Msa1265440 | Msa1386710 | 0.811723 | 6.071378e-51 | -8.615850e-47 |
Msa1270420 | Msa1386710 | 0.823297 | 1.494403e-53 | -8.615850e-47 |
Msa1275590 | Msa1386710 | 0.819670 | 1.028240e-52 | -8.615850e-47 |
Msa1276660 | Msa1386710 | 0.858081 | 1.052399e-62 | -8.615850e-47 |
Msa1277490 | Msa1386710 | 0.839315 | 1.705619e-57 | -8.615850e-47 |
Msa1298370 | Msa1386710 | 0.824144 | 9.462389e-54 | -8.615850e-47 |
Msa1303240 | Msa1386710 | 0.819741 | 9.901943e-53 | -8.615850e-47 |
Msa1303250 | Msa1386710 | 0.819505 | 1.121428e-52 | -8.615850e-47 |
Msa1320410 | Msa1386710 | 0.804644 | 1.956733e-49 | -8.615850e-47 |
Msa1329050 | Msa1386710 | -0.812059 | 5.129814e-51 | -8.615850e-47 |
Msa1332760 | Msa1386710 | 0.838859 | 2.239257e-57 | -8.615850e-47 |
Msa0365100 | Msa1386710 | 0.855048 | 8.189919e-62 | -8.615850e-47 |
Msa0369050 | Msa1386710 | 0.801800 | 7.587395e-49 | -8.615850e-47 |
Msa0376630 | Msa1386710 | 0.812800 | 3.532115e-51 | -8.615850e-47 |
Msa0378720 | Msa1386710 | 0.857180 | 1.945602e-62 | -8.615850e-47 |
Msa0378970 | Msa1386710 | 0.801774 | 7.682858e-49 | -8.615850e-47 |
Msa0381610 | Msa1386710 | -0.808237 | 3.418239e-50 | -8.615850e-47 |
Msa0419720 | Msa1386710 | 0.801290 | 9.653159e-49 | -8.615850e-47 |
Msa0423750 | Msa1386710 | 0.815399 | 9.430428e-52 | -8.615850e-47 |
Msa0427100 | Msa1386710 | 0.839240 | 1.784036e-57 | -8.615850e-47 |
Msa0427120 | Msa1386710 | 0.846561 | 2.010630e-59 | -8.615850e-47 |
Msa0428050 | Msa1386710 | 0.814136 | 1.796452e-51 | -8.615850e-47 |
Msa0428240 | Msa1386710 | 0.838312 | 3.098449e-57 | -8.615850e-47 |
Msa0450400 | Msa1386710 | -0.804983 | 1.661899e-49 | -8.615850e-47 |
Msa0452710 | Msa1386710 | 0.807705 | 4.435111e-50 | -8.615850e-47 |
Msa0453690 | Msa1386710 | 0.806155 | 9.436803e-50 | -8.615850e-47 |
Msa0456880 | Msa1386710 | 0.800712 | 1.267150e-48 | -8.615850e-47 |
Msa0473500 | Msa1386710 | 0.870973 | 9.733286e-67 | -8.615850e-47 |
Msa0474730 | Msa1386710 | 0.827141 | 1.843187e-54 | -8.615850e-47 |
Msa0479170 | Msa1386710 | 0.855568 | 5.782233e-62 | -8.615850e-47 |
Msa0479200 | Msa1386710 | 0.854905 | 9.012561e-62 | -8.615850e-47 |
Msa0980540 | Msa1386710 | 0.800036 | 1.740084e-48 | -8.615850e-47 |
Msa0997430 | Msa1386710 | 0.801145 | 1.033504e-48 | -8.615850e-47 |
Msa1002850 | Msa1386710 | 0.828856 | 7.122476e-55 | -8.615850e-47 |
Msa1006840 | Msa1386710 | 0.822370 | 2.456837e-53 | -8.615850e-47 |
Msa1007820 | Msa1386710 | -0.801863 | 7.364792e-49 | -8.615850e-47 |
Msa1009660 | Msa1386710 | 0.823550 | 1.303915e-53 | -8.615850e-47 |
Msa1013400 | Msa1386710 | 0.805263 | 1.452390e-49 | -8.615850e-47 |
Msa1020510 | Msa1386710 | 0.820539 | 6.503686e-53 | -8.615850e-47 |
Msa1020630 | Msa1386710 | 0.800751 | 1.244462e-48 | -8.615850e-47 |
Msa1029070 | Msa1386710 | 0.806674 | 7.335080e-50 | -8.615850e-47 |
Msa1031930 | Msa1386710 | 0.839696 | 1.358091e-57 | -8.615850e-47 |
Msa1035960 | Msa1386710 | 0.806332 | 8.662175e-50 | -8.615850e-47 |
Msa1036610 | Msa1386710 | 0.804764 | 1.846686e-49 | -8.615850e-47 |
Msa1040840 | Msa1386710 | 0.830149 | 3.455018e-55 | -8.615850e-47 |
Msa1047870 | Msa1386710 | 0.804618 | 1.980951e-49 | -8.615850e-47 |
Msa1050910 | Msa1386710 | 0.823815 | 1.130704e-53 | -8.615850e-47 |
Msa1050960 | Msa1386710 | 0.813522 | 2.452598e-51 | -8.615850e-47 |
Msa1055010 | Msa1386710 | 0.825042 | 5.814192e-54 | -8.615850e-47 |
Msa1065390 | Msa1386710 | 0.802648 | 5.077307e-49 | -8.615850e-47 |
Msa1066490 | Msa1386710 | 0.830694 | 2.542843e-55 | -8.615850e-47 |
Msa1071770 | Msa1386710 | 0.827449 | 1.555327e-54 | -8.615850e-47 |
Msa1076810 | Msa1386710 | -0.801513 | 8.689695e-49 | -8.615850e-47 |
Msa1078170 | Msa1386710 | 0.830488 | 2.855186e-55 | -8.615850e-47 |
Msa1079230 | Msa1386710 | 0.839042 | 2.007478e-57 | -8.615850e-47 |
Msa1080640 | Msa1386710 | 0.809946 | 1.471285e-50 | -8.615850e-47 |
Msa1080800 | Msa1386710 | 0.812791 | 3.549899e-51 | -8.615850e-47 |
Msa1089450 | Msa1386710 | 0.828192 | 1.030811e-54 | -8.615850e-47 |
Msa1093260 | Msa1386710 | 0.804384 | 2.216954e-49 | -8.615850e-47 |
Msa1093530 | Msa1386710 | 0.809642 | 1.711004e-50 | -8.615850e-47 |
Msa1093840 | Msa1386710 | 0.819288 | 1.256824e-52 | -8.615850e-47 |
Msa1101090 | Msa1386710 | 0.803828 | 2.892808e-49 | -8.615850e-47 |
Msa1104140 | Msa1386710 | 0.806720 | 7.170709e-50 | -8.615850e-47 |
Msa0239800 | Msa1386710 | 0.802289 | 6.021714e-49 | -8.615850e-47 |
Msa0240900 | Msa1386710 | 0.816282 | 5.992404e-52 | -8.615850e-47 |
Msa0241830 | Msa1386710 | 0.802633 | 5.113892e-49 | -8.615850e-47 |
Msa0249580 | Msa1386710 | 0.818538 | 1.860756e-52 | -8.615850e-47 |
Msa0253290 | Msa1386710 | 0.807515 | 4.867310e-50 | -8.615850e-47 |
Msa0257520 | Msa1386710 | 0.803956 | 2.721108e-49 | -8.615850e-47 |
Msa0261170 | Msa1386710 | 0.805034 | 1.622063e-49 | -8.615850e-47 |
Msa0263080 | Msa1386710 | 0.801595 | 8.360240e-49 | -8.615850e-47 |
Msa0266350 | Msa1386710 | 0.820000 | 8.639943e-53 | -8.615850e-47 |
Msa0266500 | Msa1386710 | 0.815253 | 1.016431e-51 | -8.615850e-47 |
Msa0267920 | Msa1386710 | 0.809944 | 1.472818e-50 | -8.615850e-47 |
Msa0270660 | Msa1386710 | 0.834022 | 3.810138e-56 | -8.615850e-47 |
Msa0277450 | Msa1386710 | 0.992974 | 1.238220e-196 | -8.615850e-47 |
Msa0281430 | Msa1386710 | 0.802100 | 6.584058e-49 | -8.615850e-47 |
Msa0281530 | Msa1386710 | 0.803144 | 4.009626e-49 | -8.615850e-47 |
Msa0292120 | Msa1386710 | 0.822421 | 2.389912e-53 | -8.615850e-47 |
Msa0292400 | Msa1386710 | 0.806522 | 7.896061e-50 | -8.615850e-47 |
Msa0296250 | Msa1386710 | 0.814297 | 1.655259e-51 | -8.615850e-47 |
Msa0297790 | Msa1386710 | 0.818142 | 2.287438e-52 | -8.615850e-47 |
Msa0300270 | Msa1386710 | 0.860315 | 2.251037e-63 | -8.615850e-47 |
Msa0300320 | Msa1386710 | 0.873375 | 1.543384e-67 | -8.615850e-47 |
Msa0300690 | Msa1386710 | 0.830601 | 2.679134e-55 | -8.615850e-47 |
Msa0302160 | Msa1386710 | 0.808352 | 3.231222e-50 | -8.615850e-47 |
Msa0305780 | Msa1386710 | 0.807111 | 5.929118e-50 | -8.615850e-47 |
Msa0317160 | Msa1386710 | 0.948297 | 1.247254e-106 | -8.615850e-47 |
Msa0317970 | Msa1386710 | 0.833445 | 5.310236e-56 | -8.615850e-47 |
Msa0320590 | Msa1386710 | 0.818106 | 2.330443e-52 | -8.615850e-47 |
Msa0322900 | Msa1386710 | 0.824721 | 6.921671e-54 | -8.615850e-47 |
Msa0326480 | Msa1386710 | 0.819921 | 9.008724e-53 | -8.615850e-47 |
Msa0326590 | Msa1386710 | 0.833154 | 6.276629e-56 | -8.615850e-47 |
Msa0335800 | Msa1386710 | 0.832863 | 7.416783e-56 | -8.615850e-47 |
Msa0337700 | Msa1386710 | 0.845187 | 4.749015e-59 | -8.615850e-47 |
Msa0339250 | Msa1386710 | 0.810347 | 1.206054e-50 | -8.615850e-47 |
Msa0339490 | Msa1386710 | 0.814075 | 1.852745e-51 | -8.615850e-47 |
Msa0339500 | Msa1386710 | 0.830103 | 3.546318e-55 | -8.615850e-47 |
Msa0341690 | Msa1386710 | 0.874726 | 5.389664e-68 | -8.615850e-47 |
Msa0342010 | Msa1386710 | 0.802182 | 6.333620e-49 | -8.615850e-47 |
Msa0345330 | Msa1386710 | 0.828810 | 7.309863e-55 | -8.615850e-47 |
Msa0345410 | Msa1386710 | 0.817879 | 2.622145e-52 | -8.615850e-47 |
Msa0357900 | Msa1386710 | 0.828177 | 1.039493e-54 | -8.615850e-47 |
Msa0358890 | Msa1386710 | 0.815862 | 7.437223e-52 | -8.615850e-47 |
Msa1113800 | Msa1386710 | 0.824622 | 7.306988e-54 | -8.615850e-47 |
Msa1123380 | Msa1386710 | 0.852574 | 4.221542e-61 | -8.615850e-47 |
Msa1124110 | Msa1386710 | 0.820043 | 8.447009e-53 | -8.615850e-47 |
Msa1126450 | Msa1386710 | 0.839787 | 1.285935e-57 | -8.615850e-47 |
Msa1127590 | Msa1386710 | 0.821276 | 4.399447e-53 | -8.615850e-47 |
Msa1135270 | Msa1386710 | 0.807828 | 4.177807e-50 | -8.615850e-47 |
Msa1135890 | Msa1386710 | 0.813847 | 2.080116e-51 | -8.615850e-47 |
Msa1137570 | Msa1386710 | 0.812591 | 3.924791e-51 | -8.615850e-47 |
Msa1139890 | Msa1386710 | 0.810931 | 9.016379e-51 | -8.615850e-47 |
Msa1140210 | Msa1386710 | 0.802930 | 4.441655e-49 | -8.615850e-47 |
Msa1156160 | Msa1386710 | 0.803623 | 3.191095e-49 | -8.615850e-47 |
Msa1158830 | Msa1386710 | 0.822083 | 2.862968e-53 | -8.615850e-47 |
Msa1160500 | Msa1386710 | 0.817287 | 3.565569e-52 | -8.615850e-47 |
Msa1162780 | Msa1386710 | 0.802090 | 6.615550e-49 | -8.615850e-47 |
Msa1163650 | Msa1386710 | -0.844898 | 5.684430e-59 | -8.615850e-47 |
Msa1163730 | Msa1386710 | 0.805344 | 1.396997e-49 | -8.615850e-47 |
Msa1168160 | Msa1386710 | 0.810778 | 9.734095e-51 | -8.615850e-47 |
Msa1168950 | Msa1386710 | 0.825006 | 5.929441e-54 | -8.615850e-47 |
Msa1169040 | Msa1386710 | 0.820043 | 8.447683e-53 | -8.615850e-47 |
Msa1173300 | Msa1386710 | 0.809118 | 2.215705e-50 | -8.615850e-47 |
Msa1174530 | Msa1386710 | 0.836351 | 9.844918e-57 | -8.615850e-47 |
Msa1193290 | Msa1386710 | 0.802807 | 4.707607e-49 | -8.615850e-47 |
Msa1203710 | Msa1386710 | 0.805764 | 1.140086e-49 | -8.615850e-47 |
Msa1204100 | Msa1386710 | -0.814903 | 1.215497e-51 | -8.615850e-47 |
Msa1205280 | Msa1386710 | 0.805267 | 1.449512e-49 | -8.615850e-47 |
Msa1208160 | Msa1386710 | 0.838703 | 2.456994e-57 | -8.615850e-47 |
Msa1208430 | Msa1386710 | 0.823710 | 1.196222e-53 | -8.615850e-47 |
Msa1208890 | Msa1386710 | -0.808366 | 3.209312e-50 | -8.615850e-47 |
Msa1218450 | Msa1386710 | 0.815774 | 7.779831e-52 | -8.615850e-47 |
Msa1219000 | Msa1386710 | 0.829083 | 6.275657e-55 | -8.615850e-47 |
Msa1221060 | Msa1386710 | 0.816419 | 5.584006e-52 | -8.615850e-47 |
Msa0485240 | Msa1386710 | 0.805848 | 1.095144e-49 | -8.615850e-47 |
Msa0498060 | Msa1386710 | 0.804832 | 1.787765e-49 | -8.615850e-47 |
Msa0498450 | Msa1386710 | 0.805449 | 1.328123e-49 | -8.615850e-47 |
Msa0508590 | Msa1386710 | 0.800511 | 1.392913e-48 | -8.615850e-47 |
Msa0513160 | Msa1386710 | 0.803746 | 3.009324e-49 | -8.615850e-47 |
Msa0517090 | Msa1386710 | 0.827311 | 1.677748e-54 | -8.615850e-47 |
Msa0518030 | Msa1386710 | 0.836854 | 7.331164e-57 | -8.615850e-47 |
Msa0519130 | Msa1386710 | 0.813275 | 2.779471e-51 | -8.615850e-47 |
Msa0526540 | Msa1386710 | 0.827461 | 1.544633e-54 | -8.615850e-47 |
Msa0527020 | Msa1386710 | 0.809478 | 1.855355e-50 | -8.615850e-47 |
Msa0527190 | Msa1386710 | 0.831600 | 1.522630e-55 | -8.615850e-47 |
Msa0532980 | Msa1386710 | 0.821896 | 3.163683e-53 | -8.615850e-47 |
Msa0532990 | Msa1386710 | 0.813267 | 2.791363e-51 | -8.615850e-47 |
Msa0538910 | Msa1386710 | 0.801899 | 7.241150e-49 | -8.615850e-47 |
Msa0547720 | Msa1386710 | 0.801241 | 9.878381e-49 | -8.615850e-47 |
Msa0547990 | Msa1386710 | 0.801293 | 9.641763e-49 | -8.615850e-47 |
Msa0548150 | Msa1386710 | 0.800252 | 1.572196e-48 | -8.615850e-47 |
Msa0556010 | Msa1386710 | 0.848382 | 6.352523e-60 | -8.615850e-47 |
Msa0559870 | Msa1386710 | 0.804090 | 2.551877e-49 | -8.615850e-47 |
Msa0568480 | Msa1386710 | 0.803411 | 3.530546e-49 | -8.615850e-47 |
Msa0572840 | Msa1386710 | 0.807266 | 5.498279e-50 | -8.615850e-47 |
Msa0573380 | Msa1386710 | 0.808709 | 2.711063e-50 | -8.615850e-47 |
Msa0574390 | Msa1386710 | 0.831548 | 1.567897e-55 | -8.615850e-47 |
Msa0576680 | Msa1386710 | 0.806006 | 1.014151e-49 | -8.615850e-47 |
Msa0576940 | Msa1386710 | 0.810701 | 1.011371e-50 | -8.615850e-47 |
Msa0579660 | Msa1386710 | 0.800349 | 1.502601e-48 | -8.615850e-47 |
Msa0581690 | Msa1386710 | 0.821979 | 3.026497e-53 | -8.615850e-47 |
Msa0584550 | Msa1386710 | 0.809447 | 1.883436e-50 | -8.615850e-47 |
Msa0588090 | Msa1386710 | 0.803958 | 2.718704e-49 | -8.615850e-47 |
Msa0844390 | Msa1386710 | 0.803811 | 2.917149e-49 | -8.615850e-47 |
Msa0861510 | Msa1386710 | 0.840852 | 6.774570e-58 | -8.615850e-47 |
Msa0861530 | Msa1386710 | 0.827427 | 1.573690e-54 | -8.615850e-47 |
Msa0861600 | Msa1386710 | 0.828929 | 6.841894e-55 | -8.615850e-47 |
Msa0863930 | Msa1386710 | 0.814481 | 1.507613e-51 | -8.615850e-47 |
Msa0865570 | Msa1386710 | 0.806989 | 6.292850e-50 | -8.615850e-47 |
Msa0866520 | Msa1386710 | 0.821555 | 3.794811e-53 | -8.615850e-47 |
Msa0878510 | Msa1386710 | 0.801030 | 1.091456e-48 | -8.615850e-47 |
Msa0902760 | Msa1386710 | 0.808121 | 3.618133e-50 | -8.615850e-47 |
Msa0940580 | Msa1386710 | 0.809861 | 1.534751e-50 | -8.615850e-47 |
Msa0944660 | Msa1386710 | 0.814713 | 1.339395e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386710 | MtrunA17_Chr2g0290281 | 98.895 | 181 | 2 | 0 | 21 | 201 | 1 | 181 | 6.79e-128 | 357 |
Msa1386710 | MtrunA17_Chr4g0072591 | 29.379 | 177 | 120 | 2 | 24 | 195 | 1 | 177 | 4.42e-24 | 94.0 |
Msa1386710 | MtrunA17_Chr3g0109681 | 32.317 | 164 | 101 | 3 | 28 | 191 | 42 | 195 | 3.02e-21 | 87.4 |
Msa1386710 | MtrunA17_Chr5g0433491 | 30.909 | 165 | 104 | 4 | 28 | 191 | 34 | 189 | 1.01e-18 | 80.5 |
Msa1386710 | MtrunA17_Chr4g0021111 | 30.822 | 146 | 85 | 3 | 29 | 171 | 6 | 138 | 3.23e-15 | 70.1 |
Msa1386710 | MtrunA17_Chr7g0231191 | 26.316 | 171 | 116 | 4 | 28 | 198 | 19 | 179 | 6.91e-14 | 67.0 |
Msa1386710 | MtrunA17_Chr8g0340351 | 29.814 | 161 | 104 | 3 | 26 | 177 | 33 | 193 | 1.96e-12 | 63.5 |
Msa1386710 | MtrunA17_Chr7g0217691 | 26.744 | 172 | 118 | 3 | 20 | 189 | 20 | 185 | 4.78e-12 | 62.0 |
Msa1386710 | MtrunA17_Chr7g0268681 | 27.895 | 190 | 122 | 6 | 9 | 191 | 5 | 186 | 1.08e-11 | 61.2 |
Msa1386710 | MtrunA17_Chr4g0066711 | 31.410 | 156 | 104 | 3 | 32 | 187 | 29 | 181 | 1.80e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386710 | AT2G35760.1 | 68.718 | 195 | 60 | 1 | 1 | 195 | 1 | 194 | 1.91e-87 | 256 |
Msa1386710 | AT4G16442.1 | 61.798 | 178 | 68 | 0 | 21 | 198 | 1 | 178 | 1.70e-79 | 235 |
Msa1386710 | AT4G25830.1 | 35.294 | 170 | 104 | 3 | 27 | 195 | 3 | 167 | 3.03e-23 | 91.7 |
Msa1386710 | AT1G17200.1 | 30.814 | 172 | 111 | 3 | 28 | 199 | 30 | 193 | 2.75e-22 | 90.1 |
Msa1386710 | AT3G14380.1 | 29.240 | 171 | 103 | 3 | 23 | 188 | 15 | 172 | 5.60e-15 | 70.1 |
Msa1386710 | AT4G15610.1 | 31.098 | 164 | 97 | 3 | 9 | 167 | 16 | 168 | 2.83e-14 | 68.6 |
Msa1386710 | AT5G15290.1 | 28.000 | 150 | 103 | 2 | 23 | 170 | 20 | 166 | 9.64e-14 | 67.0 |
Msa1386710 | AT4G15630.1 | 27.011 | 174 | 120 | 2 | 17 | 187 | 20 | 189 | 1.45e-11 | 61.2 |
Msa1386710 | AT1G03700.1 | 29.710 | 138 | 87 | 2 | 29 | 166 | 7 | 134 | 2.13e-11 | 60.1 |
Msa1386710 | AT4G03540.1 | 29.839 | 124 | 77 | 2 | 48 | 171 | 26 | 139 | 6.35e-11 | 58.9 |
Find 57 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACATCTGGTTTAGCATTTA+AGG | 0.092229 | tig0020858:-27893 | None:intergenic |
CTTATAATCACTTTCTTTCT+AGG | 0.144389 | tig0020858:+27782 | Msa1386710:five_prime_UTR |
TTAATGATTCATGTAATTAT+AGG | 0.216861 | tig0020858:+27929 | Msa1386710:five_prime_UTR |
GGTCAAGAATGGAGGCTTCT+AGG | 0.310942 | tig0020858:-27996 | None:intergenic |
TCATCCATTGCAATTGTTCC+TGG | 0.311139 | tig0020858:-30018 | None:intergenic |
AGGTTTGTGAATCTTGGTTT+AGG | 0.330696 | tig0020858:+28272 | Msa1386710:CDS |
AAATTGCAAAACAACCAAAT+TGG | 0.332368 | tig0020858:-30271 | None:intergenic |
ATGTTCTAATGCTTATTAAT+TGG | 0.333637 | tig0020858:+30379 | Msa1386710:three_prime_UTR |
ACATCTCAAACCTTGAATTA+AGG | 0.337420 | tig0020858:-28639 | None:intergenic |
TAATAAACTTTACAGGTTCC+TGG | 0.340752 | tig0020858:+28586 | Msa1386710:intron |
AATAGGTCTGTTCTGACATC+TGG | 0.349404 | tig0020858:-27907 | None:intergenic |
TTCAGTCTCTTCCGTTTGTA+TGG | 0.355002 | tig0020858:+30145 | Msa1386710:CDS |
AATTACATGAATCATTAAAT+AGG | 0.356990 | tig0020858:-27924 | None:intergenic |
TGTGTAGTGAGTATGATTAA+AGG | 0.372404 | tig0020858:+28659 | Msa1386710:CDS |
TTAGTATAAGTTAATATCAT+AGG | 0.383186 | tig0020858:+30201 | Msa1386710:three_prime_UTR |
ATGTTTGTACTATGATAAAC+AGG | 0.392867 | tig0020858:-28206 | None:intergenic |
ATCTGCTGTGTTTGCAAAGA+TGG | 0.404743 | tig0020858:+29994 | Msa1386710:CDS |
TGATAAACAGGAACAGTTCC+AGG | 0.407224 | tig0020858:-28194 | None:intergenic |
GCTGGTTACTCCTTAATTCA+AGG | 0.432706 | tig0020858:+28629 | Msa1386710:CDS |
TCTTCCTAGACATACAATAA+AGG | 0.438918 | tig0020858:+27827 | Msa1386710:five_prime_UTR |
TTTCAACAAGCCCTTAGCTT+GGG | 0.448248 | tig0020858:+28691 | Msa1386710:CDS |
GAATTTAGCTTTCTTCTGAA+TGG | 0.449071 | tig0020858:-28348 | None:intergenic |
TTATAATCACTTTCTTTCTA+GGG | 0.458569 | tig0020858:+27783 | Msa1386710:five_prime_UTR |
AGAAAATATAGCCCAAGCTA+AGG | 0.484898 | tig0020858:-28702 | None:intergenic |
TTCTGCAACCAAGTTGGAGA+AGG | 0.490439 | tig0020858:+30064 | Msa1386710:CDS |
TAGCTAACCCTTCTCCAACT+TGG | 0.494841 | tig0020858:-30072 | None:intergenic |
ATGTCTAGGAAGAAGTAGTA+AGG | 0.497198 | tig0020858:-27817 | None:intergenic |
ATGAAGATATGCAATATGTA+TGG | 0.503142 | tig0020858:+30037 | Msa1386710:CDS |
GTTGCTAATGCTATAACTGC+TGG | 0.511879 | tig0020858:+28611 | Msa1386710:CDS |
GTGTGACAAGTGGTCAAGAA+TGG | 0.513241 | tig0020858:-28007 | None:intergenic |
AGCTAAATTCACTGACATGA+AGG | 0.513279 | tig0020858:+28361 | Msa1386710:CDS |
GGAAAATTCTGCAACCAAGT+TGG | 0.516285 | tig0020858:+30058 | Msa1386710:CDS |
CATGAAAGTGTTGGATAGGA+GGG | 0.520852 | tig0020858:+28226 | Msa1386710:CDS |
CAAACATGAAAGTGTTGGAT+AGG | 0.521116 | tig0020858:+28222 | Msa1386710:CDS |
TTGGGTGTAGGTGTTAGTCC+TGG | 0.521914 | tig0020858:+28176 | Msa1386710:CDS |
ACATGAAAGTGTTGGATAGG+AGG | 0.523051 | tig0020858:+28225 | Msa1386710:CDS |
GAGGGTTAGAATAACTGAGT+TGG | 0.530374 | tig0020858:+28244 | Msa1386710:CDS |
AGCTCCTTTATTGTATGTCT+AGG | 0.530684 | tig0020858:-27831 | None:intergenic |
GGCTTCTAGGACAGAGAAAG+AGG | 0.531910 | tig0020858:-27983 | None:intergenic |
ATGATACTACCACCATACTA+AGG | 0.534220 | tig0020858:-30111 | None:intergenic |
TTTGGTTAGCCTTAGTATGG+TGG | 0.542187 | tig0020858:+30102 | Msa1386710:CDS |
GAAAATATAGCCCAAGCTAA+GGG | 0.555703 | tig0020858:-28701 | None:intergenic |
AAAATGAGTTACTTGGGTGT+AGG | 0.573937 | tig0020858:+28164 | Msa1386710:exon |
TCTGCAACCAAGTTGGAGAA+GGG | 0.578467 | tig0020858:+30065 | Msa1386710:CDS |
AGTCTCTTCCGTTTGTATGG+TGG | 0.581332 | tig0020858:+30148 | Msa1386710:CDS |
TCTGCTGTGTTTGCAAAGAT+GGG | 0.593013 | tig0020858:+29995 | Msa1386710:CDS |
TGTGTTTGCAAAGATGGGCC+AGG | 0.595653 | tig0020858:+30000 | Msa1386710:CDS |
ATGTATGTAGTTGTAGTGAA+TGG | 0.599094 | tig0020858:+30313 | Msa1386710:three_prime_UTR |
TAGTACAAACATGAAAGTGT+TGG | 0.606008 | tig0020858:+28217 | Msa1386710:CDS |
TGGGCCAGGAACAATTGCAA+TGG | 0.614108 | tig0020858:+30014 | Msa1386710:CDS |
GGTCCTAAACAAAAGAAATG+TGG | 0.615080 | tig0020858:+27730 | None:intergenic |
TGACAAGTGGTCAAGAATGG+AGG | 0.634675 | tig0020858:-28004 | None:intergenic |
AAGAAAACAGTGGATTTGAG+TGG | 0.671545 | tig0020858:-30246 | None:intergenic |
CAAATTGGCCAAGAAAACAG+TGG | 0.680213 | tig0020858:-30256 | None:intergenic |
GGTAATGGCATATATAACAG+TGG | 0.698046 | tig0020858:+29949 | Msa1386710:intron |
TTATAGCATTAGCAACAACC+AGG | 0.720662 | tig0020858:-28604 | None:intergenic |
ATGCTGCAAAGTGTGACAAG+TGG | 0.721365 | tig0020858:-28017 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAACATGTTTATTAAAATA+AGG | - | tig0020858:29579-29598 | None:intergenic | 10.0% |
!! | AATTACATGAATCATTAAAT+AGG | - | tig0020858:27927-27946 | None:intergenic | 15.0% |
!! | TTAATGATTCATGTAATTAT+AGG | + | tig0020858:27929-27948 | Msa1386710:five_prime_UTR | 15.0% |
!!! | TCTGATAAAATTTAAAACAT+TGG | - | tig0020858:28423-28442 | None:intergenic | 15.0% |
!! | GATGAAAAAAATAGTTATAA+TGG | - | tig0020858:28503-28522 | None:intergenic | 15.0% |
!! | TTATTAAAACCATCAAAATT+GGG | - | tig0020858:28572-28591 | None:intergenic | 15.0% |
!! | TTTATTAAAACCATCAAAAT+TGG | - | tig0020858:28573-28592 | None:intergenic | 15.0% |
!!! | AATAAATGTATGTTTTATGT+TGG | - | tig0020858:29459-29478 | None:intergenic | 15.0% |
!! | ATACATACATATAAAAGTTA+TGG | - | tig0020858:29926-29945 | None:intergenic | 15.0% |
!! | TTAGTATAAGTTAATATCAT+AGG | + | tig0020858:30201-30220 | Msa1386710:three_prime_UTR | 15.0% |
!! | TTATAATCACTTTCTTTCTA+GGG | + | tig0020858:27783-27802 | Msa1386710:five_prime_UTR | 20.0% |
!! | TGAAAAGAAAGAAAAAAATG+TGG | - | tig0020858:27864-27883 | None:intergenic | 20.0% |
!!! | ATGGTTTTAATAAACTTTAC+AGG | + | tig0020858:28579-28598 | Msa1386710:intron | 20.0% |
!!! | TTTTTGTTTATAATAGTGAC+CGG | + | tig0020858:29123-29142 | Msa1386710:intron | 20.0% |
!! | TTTCAAACAACAAACTAAAT+AGG | - | tig0020858:29386-29405 | None:intergenic | 20.0% |
!!! | AATAGATATGCTCTAAAAAA+TGG | + | tig0020858:29500-29519 | Msa1386710:intron | 20.0% |
!!! | AAACCCTAAAGATTTTTATA+AGG | + | tig0020858:29553-29572 | Msa1386710:intron | 20.0% |
!!! | CTTATTTTCATAAGCATTTT+AGG | - | tig0020858:29787-29806 | None:intergenic | 20.0% |
!! | ATGTTCTAATGCTTATTAAT+TGG | + | tig0020858:30379-30398 | Msa1386710:three_prime_UTR | 20.0% |
! | CTTATAATCACTTTCTTTCT+AGG | + | tig0020858:27782-27801 | Msa1386710:five_prime_UTR | 25.0% |
! | AAGAGGTTAAGTAAGAAAAA+AGG | - | tig0020858:27969-27988 | None:intergenic | 25.0% |
!!! | TGTGAGTGTTGTTTTTTTTA+AGG | + | tig0020858:28140-28159 | Msa1386710:five_prime_UTR | 25.0% |
! | TTAAGGAAAAATGAGTTACT+TGG | + | tig0020858:28157-28176 | Msa1386710:exon | 25.0% |
! | TAAGGAAAAATGAGTTACTT+GGG | + | tig0020858:28158-28177 | Msa1386710:exon | 25.0% |
! | ATGTTTGTACTATGATAAAC+AGG | - | tig0020858:28209-28228 | None:intergenic | 25.0% |
! | TTTAGTGTATGTTTGTGAAT+TGG | + | tig0020858:28785-28804 | Msa1386710:intron | 25.0% |
! | TTGTGAATTGGACAAAATTA+TGG | + | tig0020858:28797-28816 | Msa1386710:intron | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | - | tig0020858:29013-29032 | None:intergenic | 25.0% |
! | CATTCATTAAATGATGTATG+TGG | + | tig0020858:29048-29067 | Msa1386710:intron | 25.0% |
! | CATTCATTAAATGATGTATG+TGG | - | tig0020858:29048-29067 | None:intergenic | 25.0% |
!!! | AGTTAGTTTTAGAGATTAAG+AGG | - | tig0020858:29269-29288 | None:intergenic | 25.0% |
! | ACCTAATTGATATTGATGTT+AGG | + | tig0020858:29293-29312 | Msa1386710:intron | 25.0% |
! | TCCTAACATCAATATCAATT+AGG | - | tig0020858:29297-29316 | None:intergenic | 25.0% |
! | TATACTTACTACCATAATTG+AGG | + | tig0020858:29340-29359 | Msa1386710:intron | 25.0% |
! | ATACTTACTACCATAATTGA+GGG | + | tig0020858:29341-29360 | Msa1386710:intron | 25.0% |
!!! | TTTGTTGTTTGAAATGAACA+TGG | + | tig0020858:29392-29411 | Msa1386710:intron | 25.0% |
! | GTTATTAAAAAGTGGGTATA+TGG | + | tig0020858:29417-29436 | Msa1386710:intron | 25.0% |
!! | AGGCCTTATAAAAATCTTTA+GGG | - | tig0020858:29559-29578 | None:intergenic | 25.0% |
!! | AAGGCCTTATAAAAATCTTT+AGG | - | tig0020858:29560-29579 | None:intergenic | 25.0% |
! | CAACTTATAACTTACGAAAA+CGG | - | tig0020858:29681-29700 | None:intergenic | 25.0% |
! | AATAAGCCGAAAATAGTTTA+TGG | + | tig0020858:29801-29820 | Msa1386710:intron | 25.0% |
!! | ACATGTCCATAAACTATTTT+CGG | - | tig0020858:29810-29829 | None:intergenic | 25.0% |
!! | TTTTCAGAAACTCTTCTAAA+TGG | + | tig0020858:29839-29858 | Msa1386710:intron | 25.0% |
!! | ACTTTTATATGTATGTATGC+AGG | + | tig0020858:29928-29947 | Msa1386710:intron | 25.0% |
! | ATGAAGATATGCAATATGTA+TGG | + | tig0020858:30037-30056 | Msa1386710:CDS | 25.0% |
! | GCAAAATTAAAAATGCGTAT+TGG | + | tig0020858:30173-30192 | Msa1386710:CDS | 25.0% |
!! | ATTAAAAATGCGTATTGGTA+AGG | + | tig0020858:30178-30197 | Msa1386710:CDS | 25.0% |
! | AAATTGCAAAACAACCAAAT+TGG | - | tig0020858:30274-30293 | None:intergenic | 25.0% |
!! | ATGCCACATTTCTTTTGTTT+AGG | - | tig0020858:27736-27755 | None:intergenic | 30.0% |
TCTTCCTAGACATACAATAA+AGG | + | tig0020858:27827-27846 | Msa1386710:five_prime_UTR | 30.0% | |
! | TAGTACAAACATGAAAGTGT+TGG | + | tig0020858:28217-28236 | Msa1386710:CDS | 30.0% |
!! | GAATTTAGCTTTCTTCTGAA+TGG | - | tig0020858:28351-28370 | None:intergenic | 30.0% |
GACGTAAAAGTTAGTTATAC+TGG | + | tig0020858:28441-28460 | Msa1386710:intron | 30.0% | |
! | GAATATTGTCCCAATTTTGA+TGG | + | tig0020858:28560-28579 | Msa1386710:intron | 30.0% |
TAATAAACTTTACAGGTTCC+TGG | + | tig0020858:28586-28605 | Msa1386710:intron | 30.0% | |
ACATCTCAAACCTTGAATTA+AGG | - | tig0020858:28642-28661 | None:intergenic | 30.0% | |
TGTGTAGTGAGTATGATTAA+AGG | + | tig0020858:28659-28678 | Msa1386710:CDS | 30.0% | |
AGGTGAGTTTGAAAAAATCT+CGG | - | tig0020858:28852-28871 | None:intergenic | 30.0% | |
!! | TTATTGCTTGTTTGTTATCG+AGG | - | tig0020858:28872-28891 | None:intergenic | 30.0% |
TGATATTGATGTTAGGACTA+AGG | + | tig0020858:29300-29319 | Msa1386710:intron | 30.0% | |
ATGGTAGTAAGTATACCTTA+TGG | - | tig0020858:29335-29354 | None:intergenic | 30.0% | |
TACTTACTACCATAATTGAG+GGG | + | tig0020858:29342-29361 | Msa1386710:intron | 30.0% | |
ACATGGCAGTTATTAAAAAG+TGG | + | tig0020858:29409-29428 | Msa1386710:intron | 30.0% | |
CATGGCAGTTATTAAAAAGT+GGG | + | tig0020858:29410-29429 | Msa1386710:intron | 30.0% | |
CAAAAAAAAATCTTCAGGGT+TGG | - | tig0020858:29528-29547 | None:intergenic | 30.0% | |
!!! | CAACCCTGAAGATTTTTTTT+TGG | + | tig0020858:29526-29545 | Msa1386710:intron | 30.0% |
CCTCCAAAAAAAAATCTTCA+GGG | - | tig0020858:29532-29551 | None:intergenic | 30.0% | |
!!! | CCTGAAGATTTTTTTTTGGA+GGG | + | tig0020858:29530-29549 | Msa1386710:intron | 30.0% |
CTTATTTCCAACAACTGTTT+AGG | - | tig0020858:29718-29737 | None:intergenic | 30.0% | |
ATATGTATGTATGCAGGTAA+TGG | + | tig0020858:29934-29953 | Msa1386710:intron | 30.0% | |
!!! | ATTTTTGGTTAGCCTTAGTA+TGG | + | tig0020858:30099-30118 | Msa1386710:CDS | 30.0% |
!! | TGGTTGTTTTGCAATTTACA+AGG | + | tig0020858:30277-30296 | Msa1386710:three_prime_UTR | 30.0% |
ATGTATGTAGTTGTAGTGAA+TGG | + | tig0020858:30313-30332 | Msa1386710:three_prime_UTR | 30.0% | |
ATGTCTAGGAAGAAGTAGTA+AGG | - | tig0020858:27820-27839 | None:intergenic | 35.0% | |
AGCTCCTTTATTGTATGTCT+AGG | - | tig0020858:27834-27853 | None:intergenic | 35.0% | |
! | GACATCTGGTTTAGCATTTA+AGG | - | tig0020858:27896-27915 | None:intergenic | 35.0% |
AAAATGAGTTACTTGGGTGT+AGG | + | tig0020858:28164-28183 | Msa1386710:exon | 35.0% | |
!! | CAAACATGAAAGTGTTGGAT+AGG | + | tig0020858:28222-28241 | Msa1386710:CDS | 35.0% |
!!! | GAATAACTGAGTTGGTTTTG+AGG | + | tig0020858:28252-28271 | Msa1386710:CDS | 35.0% |
!!! | GTTTTGAGGTTTGTGAATCT+TGG | + | tig0020858:28266-28285 | Msa1386710:CDS | 35.0% |
AGGTTTGTGAATCTTGGTTT+AGG | + | tig0020858:28272-28291 | Msa1386710:CDS | 35.0% | |
AGCTAAATTCACTGACATGA+AGG | + | tig0020858:28361-28380 | Msa1386710:CDS | 35.0% | |
CTTGACATTATAGCGAATCA+TGG | + | tig0020858:28536-28555 | Msa1386710:intron | 35.0% | |
TTATAGCATTAGCAACAACC+AGG | - | tig0020858:28607-28626 | None:intergenic | 35.0% | |
GAAAATATAGCCCAAGCTAA+GGG | - | tig0020858:28704-28723 | None:intergenic | 35.0% | |
AGAAAATATAGCCCAAGCTA+AGG | - | tig0020858:28705-28724 | None:intergenic | 35.0% | |
!! | TTAGCTTGGGCTATATTTTC+TGG | + | tig0020858:28704-28723 | Msa1386710:CDS | 35.0% |
TTGATCAATTATACACCCTC+CGG | + | tig0020858:28991-29010 | Msa1386710:intron | 35.0% | |
TTGTTTATAATAGTGACCGG+AGG | + | tig0020858:29126-29145 | Msa1386710:intron | 35.0% | |
TGTTTATAATAGTGACCGGA+GGG | + | tig0020858:29127-29146 | Msa1386710:intron | 35.0% | |
TGCTTGATAAGACAAACTTG+AGG | - | tig0020858:29226-29245 | None:intergenic | 35.0% | |
CTAAGGAATCATTCACCATA+AGG | + | tig0020858:29317-29336 | Msa1386710:intron | 35.0% | |
ATTGTGATACCCCTCAATTA+TGG | - | tig0020858:29354-29373 | None:intergenic | 35.0% | |
AAGTGGGTATATGGTAGATA+TGG | + | tig0020858:29426-29445 | Msa1386710:intron | 35.0% | |
!!! | CCCTGAAGATTTTTTTTTGG+AGG | + | tig0020858:29529-29548 | Msa1386710:intron | 35.0% |
CCCTCCAAAAAAAAATCTTC+AGG | - | tig0020858:29533-29552 | None:intergenic | 35.0% | |
CATCTATCCTAAACAGTTGT+TGG | + | tig0020858:29708-29727 | Msa1386710:intron | 35.0% | |
! | CTTCTAAATGGTCTTACAAG+TGG | + | tig0020858:29851-29870 | Msa1386710:intron | 35.0% |
! | GGTAATGGCATATATAACAG+TGG | + | tig0020858:29949-29968 | Msa1386710:intron | 35.0% |
ATGATACTACCACCATACTA+AGG | - | tig0020858:30114-30133 | None:intergenic | 35.0% | |
! | TTTTGCTACCACCATACAAA+CGG | - | tig0020858:30159-30178 | None:intergenic | 35.0% |
! | AAGAAAACAGTGGATTTGAG+TGG | - | tig0020858:30249-30268 | None:intergenic | 35.0% |
! | ACTCAAATCCACTGTTTTCT+TGG | + | tig0020858:30248-30267 | Msa1386710:three_prime_UTR | 35.0% |
AATAGGTCTGTTCTGACATC+TGG | - | tig0020858:27910-27929 | None:intergenic | 40.0% | |
TGATAAACAGGAACAGTTCC+AGG | - | tig0020858:28197-28216 | None:intergenic | 40.0% | |
!! | ACATGAAAGTGTTGGATAGG+AGG | + | tig0020858:28225-28244 | Msa1386710:CDS | 40.0% |
!! | CATGAAAGTGTTGGATAGGA+GGG | + | tig0020858:28226-28245 | Msa1386710:CDS | 40.0% |
GAGGGTTAGAATAACTGAGT+TGG | + | tig0020858:28244-28263 | Msa1386710:CDS | 40.0% | |
GTTGCTAATGCTATAACTGC+TGG | + | tig0020858:28611-28630 | Msa1386710:CDS | 40.0% | |
GCTGGTTACTCCTTAATTCA+AGG | + | tig0020858:28629-28648 | Msa1386710:CDS | 40.0% | |
! | TTTTCAACAAGCCCTTAGCT+TGG | + | tig0020858:28690-28709 | Msa1386710:CDS | 40.0% |
TTTCAACAAGCCCTTAGCTT+GGG | + | tig0020858:28691-28710 | Msa1386710:CDS | 40.0% | |
!! | GGCTATATTTTCTGGTGATC+AGG | + | tig0020858:28712-28731 | Msa1386710:CDS | 40.0% |
!!! | GCGTCTGTTTTTAGTGTACA+AGG | + | tig0020858:28910-28929 | Msa1386710:intron | 40.0% |
TGCTTATAATAGTGACCGGA+GGG | - | tig0020858:29009-29028 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | tig0020858:29010-29029 | None:intergenic | 40.0% | |
TTACTATTGCATACACCCTC+CGG | - | tig0020858:29145-29164 | None:intergenic | 40.0% | |
TTAGAGATTAAGAGGTCCCA+CGG | - | tig0020858:29261-29280 | None:intergenic | 40.0% | |
ATCTGCTGTGTTTGCAAAGA+TGG | + | tig0020858:29994-30013 | Msa1386710:CDS | 40.0% | |
TCTGCTGTGTTTGCAAAGAT+GGG | + | tig0020858:29995-30014 | Msa1386710:CDS | 40.0% | |
TCATCCATTGCAATTGTTCC+TGG | - | tig0020858:30021-30040 | None:intergenic | 40.0% | |
GGAAAATTCTGCAACCAAGT+TGG | + | tig0020858:30058-30077 | Msa1386710:CDS | 40.0% | |
!!! | AGGGTTAGCTAGTGCATTTT+TGG | + | tig0020858:30084-30103 | Msa1386710:CDS | 40.0% |
!! | TTTGGTTAGCCTTAGTATGG+TGG | + | tig0020858:30102-30121 | Msa1386710:CDS | 40.0% |
TTCAGTCTCTTCCGTTTGTA+TGG | + | tig0020858:30145-30164 | Msa1386710:CDS | 40.0% | |
CAAATTGGCCAAGAAAACAG+TGG | - | tig0020858:30259-30278 | None:intergenic | 40.0% | |
! | CACTGTTTTCTTGGCCAATT+TGG | + | tig0020858:30257-30276 | Msa1386710:three_prime_UTR | 40.0% |
TGACAAGTGGTCAAGAATGG+AGG | - | tig0020858:28007-28026 | None:intergenic | 45.0% | |
GTGTGACAAGTGGTCAAGAA+TGG | - | tig0020858:28010-28029 | None:intergenic | 45.0% | |
ATGCTGCAAAGTGTGACAAG+TGG | - | tig0020858:28020-28039 | None:intergenic | 45.0% | |
AAGCAATGTAACCAGTACCG+TGG | + | tig0020858:29241-29260 | Msa1386710:intron | 45.0% | |
AGCAATGTAACCAGTACCGT+GGG | + | tig0020858:29242-29261 | Msa1386710:intron | 45.0% | |
! | TTCTGCAACCAAGTTGGAGA+AGG | + | tig0020858:30064-30083 | Msa1386710:CDS | 45.0% |
! | TCTGCAACCAAGTTGGAGAA+GGG | + | tig0020858:30065-30084 | Msa1386710:CDS | 45.0% |
TAGCTAACCCTTCTCCAACT+TGG | - | tig0020858:30075-30094 | None:intergenic | 45.0% | |
AGTCTCTTCCGTTTGTATGG+TGG | + | tig0020858:30148-30167 | Msa1386710:CDS | 45.0% | |
!! | GGCTTCTAGGACAGAGAAAG+AGG | - | tig0020858:27986-28005 | None:intergenic | 50.0% |
GGTCAAGAATGGAGGCTTCT+AGG | - | tig0020858:27999-28018 | None:intergenic | 50.0% | |
TTGGGTGTAGGTGTTAGTCC+TGG | + | tig0020858:28176-28195 | Msa1386710:CDS | 50.0% | |
ATTAAGAGGTCCCACGGTAC+TGG | - | tig0020858:29255-29274 | None:intergenic | 50.0% | |
TGTGTTTGCAAAGATGGGCC+AGG | + | tig0020858:30000-30019 | Msa1386710:CDS | 50.0% | |
TGGGCCAGGAACAATTGCAA+TGG | + | tig0020858:30014-30033 | Msa1386710:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0020858 | gene | 27731 | 30433 | 27731 | ID=Msa1386710;Name=Msa1386710 |
tig0020858 | mRNA | 27731 | 30433 | 27731 | ID=Msa1386710-mRNA-1;Parent=Msa1386710;Name=Msa1386710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=436|1|1|1|1|1|3|235|201 |
tig0020858 | exon | 27731 | 28390 | 27731 | ID=Msa1386710-mRNA-1:exon:10303;Parent=Msa1386710-mRNA-1 |
tig0020858 | exon | 28601 | 28733 | 28601 | ID=Msa1386710-mRNA-1:exon:10304;Parent=Msa1386710-mRNA-1 |
tig0020858 | exon | 29950 | 30433 | 29950 | ID=Msa1386710-mRNA-1:exon:10305;Parent=Msa1386710-mRNA-1 |
tig0020858 | five_prime_UTR | 27731 | 28166 | 27731 | ID=Msa1386710-mRNA-1:five_prime_utr;Parent=Msa1386710-mRNA-1 |
tig0020858 | CDS | 28167 | 28390 | 28167 | ID=Msa1386710-mRNA-1:cds;Parent=Msa1386710-mRNA-1 |
tig0020858 | CDS | 28601 | 28733 | 28601 | ID=Msa1386710-mRNA-1:cds;Parent=Msa1386710-mRNA-1 |
tig0020858 | CDS | 29950 | 30198 | 29950 | ID=Msa1386710-mRNA-1:cds;Parent=Msa1386710-mRNA-1 |
tig0020858 | three_prime_UTR | 30199 | 30433 | 30199 | ID=Msa1386710-mRNA-1:three_prime_utr;Parent=Msa1386710-mRNA-1 |
Gene Sequence |
Protein sequence |