Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163650 | XP_013449858.1 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163650 | sp|Q94JW0|DOHH_ARATH | 75.884 | 311 | 75 | 0 | 7 | 317 | 4 | 314 | 2.40e-168 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163650 | A0A072U3H2 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1163650 | 0.823679 | 1.216752e-53 | -8.615850e-47 |
| Msa0013050 | Msa1163650 | 0.818403 | 1.996591e-52 | -8.615850e-47 |
| Msa0014570 | Msa1163650 | -0.813452 | 2.541812e-51 | -8.615850e-47 |
| Msa0024210 | Msa1163650 | 0.859144 | 5.069033e-63 | -8.615850e-47 |
| Msa0032840 | Msa1163650 | 0.803872 | 2.832713e-49 | -8.615850e-47 |
| Msa0033110 | Msa1163650 | -0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa0033260 | Msa1163650 | -0.803706 | 3.067083e-49 | -8.615850e-47 |
| Msa0036130 | Msa1163650 | -0.803877 | 2.825874e-49 | -8.615850e-47 |
| Msa0039900 | Msa1163650 | 0.808122 | 3.617157e-50 | -8.615850e-47 |
| Msa0044540 | Msa1163650 | 0.805826 | 1.106775e-49 | -8.615850e-47 |
| Msa0052730 | Msa1163650 | -0.810622 | 1.051643e-50 | -8.615850e-47 |
| Msa0063350 | Msa1163650 | 0.805536 | 1.273139e-49 | -8.615850e-47 |
| Msa0084380 | Msa1163650 | -0.809881 | 1.519696e-50 | -8.615850e-47 |
| Msa0087800 | Msa1163650 | -0.809666 | 1.690553e-50 | -8.615850e-47 |
| Msa0089820 | Msa1163650 | -0.804465 | 2.132435e-49 | -8.615850e-47 |
| Msa0091410 | Msa1163650 | -0.802775 | 4.779617e-49 | -8.615850e-47 |
| Msa0108390 | Msa1163650 | -0.802244 | 6.151102e-49 | -8.615850e-47 |
| Msa0110970 | Msa1163650 | -0.804979 | 1.665101e-49 | -8.615850e-47 |
| Msa0114540 | Msa1163650 | 0.811888 | 5.589786e-51 | -8.615850e-47 |
| Msa0120010 | Msa1163650 | 0.837832 | 4.117747e-57 | -8.615850e-47 |
| Msa0120020 | Msa1163650 | 0.838248 | 3.219123e-57 | -8.615850e-47 |
| Msa0120040 | Msa1163650 | 0.822496 | 2.296526e-53 | -8.615850e-47 |
| Msa0609410 | Msa1163650 | 0.833933 | 4.011373e-56 | -8.615850e-47 |
| Msa0626090 | Msa1163650 | -0.819006 | 1.456659e-52 | -8.615850e-47 |
| Msa0643180 | Msa1163650 | -0.801901 | 7.234242e-49 | -8.615850e-47 |
| Msa0643890 | Msa1163650 | -0.803665 | 3.128608e-49 | -8.615850e-47 |
| Msa0648240 | Msa1163650 | 0.805279 | 1.441226e-49 | -8.615850e-47 |
| Msa0661190 | Msa1163650 | 0.838261 | 3.195161e-57 | -8.615850e-47 |
| Msa0664910 | Msa1163650 | -0.802254 | 6.122002e-49 | -8.615850e-47 |
| Msa0682840 | Msa1163650 | -0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0721280 | Msa1163650 | -0.821892 | 3.170326e-53 | -8.615850e-47 |
| Msa0727260 | Msa1163650 | -0.801494 | 8.768211e-49 | -8.615850e-47 |
| Msa0729720 | Msa1163650 | -0.814887 | 1.225344e-51 | -8.615850e-47 |
| Msa0731940 | Msa1163650 | -0.802238 | 6.168012e-49 | -8.615850e-47 |
| Msa0740510 | Msa1163650 | -0.816794 | 4.602560e-52 | -8.615850e-47 |
| Msa0756630 | Msa1163650 | 0.820802 | 5.658067e-53 | -8.615850e-47 |
| Msa0757450 | Msa1163650 | 0.817420 | 3.327983e-52 | -8.615850e-47 |
| Msa0757500 | Msa1163650 | 0.815997 | 6.938723e-52 | -8.615850e-47 |
| Msa0764130 | Msa1163650 | 0.849791 | 2.577558e-60 | -8.615850e-47 |
| Msa0777570 | Msa1163650 | 0.811396 | 7.148350e-51 | -8.615850e-47 |
| Msa0796700 | Msa1163650 | -0.822239 | 2.634385e-53 | -8.615850e-47 |
| Msa0800270 | Msa1163650 | -0.811015 | 8.647434e-51 | -8.615850e-47 |
| Msa0810220 | Msa1163650 | -0.803716 | 3.053060e-49 | -8.615850e-47 |
| Msa0818160 | Msa1163650 | -0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa0820770 | Msa1163650 | -0.819418 | 1.173350e-52 | -8.615850e-47 |
| Msa0828560 | Msa1163650 | -0.813488 | 2.495750e-51 | -8.615850e-47 |
| Msa0131330 | Msa1163650 | -0.807115 | 5.918206e-50 | -8.615850e-47 |
| Msa0136070 | Msa1163650 | -0.811182 | 7.955340e-51 | -8.615850e-47 |
| Msa0136100 | Msa1163650 | -0.803665 | 3.127650e-49 | -8.615850e-47 |
| Msa0140500 | Msa1163650 | 0.864486 | 1.174479e-64 | -8.615850e-47 |
| Msa0140860 | Msa1163650 | -0.810230 | 1.278294e-50 | -8.615850e-47 |
| Msa0154440 | Msa1163650 | -0.820369 | 7.114759e-53 | -8.615850e-47 |
| Msa0180790 | Msa1163650 | 0.814008 | 1.916749e-51 | -8.615850e-47 |
| Msa0188150 | Msa1163650 | -0.827475 | 1.532415e-54 | -8.615850e-47 |
| Msa0192510 | Msa1163650 | -0.805473 | 1.312389e-49 | -8.615850e-47 |
| Msa0211150 | Msa1163650 | -0.810813 | 9.562883e-51 | -8.615850e-47 |
| Msa0212990 | Msa1163650 | -0.800750 | 1.244757e-48 | -8.615850e-47 |
| Msa0215320 | Msa1163650 | 0.801343 | 9.415038e-49 | -8.615850e-47 |
| Msa0218810 | Msa1163650 | -0.800449 | 1.434039e-48 | -8.615850e-47 |
| Msa0220580 | Msa1163650 | -0.800593 | 1.340288e-48 | -8.615850e-47 |
| Msa0223410 | Msa1163650 | 0.820944 | 5.247198e-53 | -8.615850e-47 |
| Msa0229490 | Msa1163650 | 0.821497 | 3.912508e-53 | -8.615850e-47 |
| Msa0236510 | Msa1163650 | 0.806613 | 7.555754e-50 | -8.615850e-47 |
| Msa0236700 | Msa1163650 | 0.805666 | 1.195786e-49 | -8.615850e-47 |
| Msa0365100 | Msa1163650 | -0.829745 | 4.333694e-55 | -8.615850e-47 |
| Msa0381610 | Msa1163650 | 0.864656 | 1.039127e-64 | -8.615850e-47 |
| Msa0390400 | Msa1163650 | 0.833791 | 4.354019e-56 | -8.615850e-47 |
| Msa0393080 | Msa1163650 | -0.800591 | 1.341476e-48 | -8.615850e-47 |
| Msa0410650 | Msa1163650 | -0.812152 | 4.894989e-51 | -8.615850e-47 |
| Msa0412840 | Msa1163650 | -0.804938 | 1.698838e-49 | -8.615850e-47 |
| Msa0414950 | Msa1163650 | 0.830614 | 2.658930e-55 | -8.615850e-47 |
| Msa0423040 | Msa1163650 | -0.803353 | 3.629501e-49 | -8.615850e-47 |
| Msa0427100 | Msa1163650 | -0.814226 | 1.716015e-51 | -8.615850e-47 |
| Msa0427120 | Msa1163650 | -0.819665 | 1.030909e-52 | -8.615850e-47 |
| Msa0440750 | Msa1163650 | -0.813962 | 1.962559e-51 | -8.615850e-47 |
| Msa0457510 | Msa1163650 | -0.802006 | 6.885145e-49 | -8.615850e-47 |
| Msa0459770 | Msa1163650 | 0.813653 | 2.295191e-51 | -8.615850e-47 |
| Msa0473500 | Msa1163650 | -0.814179 | 1.758040e-51 | -8.615850e-47 |
| Msa0479170 | Msa1163650 | -0.821010 | 5.068170e-53 | -8.615850e-47 |
| Msa0479970 | Msa1163650 | -0.816823 | 4.532848e-52 | -8.615850e-47 |
| Msa0993290 | Msa1163650 | -0.810957 | 8.902982e-51 | -8.615850e-47 |
| Msa0993600 | Msa1163650 | -0.804347 | 2.256856e-49 | -8.615850e-47 |
| Msa1002850 | Msa1163650 | -0.807455 | 5.013985e-50 | -8.615850e-47 |
| Msa1004900 | Msa1163650 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa1007820 | Msa1163650 | 0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa1018990 | Msa1163650 | 0.842345 | 2.736935e-58 | -8.615850e-47 |
| Msa1031470 | Msa1163650 | 0.801329 | 9.476736e-49 | -8.615850e-47 |
| Msa1031930 | Msa1163650 | -0.825415 | 4.747250e-54 | -8.615850e-47 |
| Msa1033410 | Msa1163650 | 0.812167 | 4.857973e-51 | -8.615850e-47 |
| Msa1036710 | Msa1163650 | 0.804830 | 1.789728e-49 | -8.615850e-47 |
| Msa1037650 | Msa1163650 | 0.839802 | 1.274129e-57 | -8.615850e-47 |
| Msa1040400 | Msa1163650 | -0.821523 | 3.858665e-53 | -8.615850e-47 |
| Msa1043370 | Msa1163650 | -0.814012 | 1.913449e-51 | -8.615850e-47 |
| Msa1051770 | Msa1163650 | -0.822681 | 2.080239e-53 | -8.615850e-47 |
| Msa1073070 | Msa1163650 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
| Msa1075220 | Msa1163650 | 0.847832 | 9.007478e-60 | -8.615850e-47 |
| Msa1076810 | Msa1163650 | 0.896529 | 3.379273e-76 | -8.615850e-47 |
| Msa1080160 | Msa1163650 | -0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa1085200 | Msa1163650 | -0.816682 | 4.875363e-52 | -8.615850e-47 |
| Msa1087510 | Msa1163650 | 0.800503 | 1.397738e-48 | -8.615850e-47 |
| Msa1100240 | Msa1163650 | 0.823075 | 1.683389e-53 | -8.615850e-47 |
| Msa0258310 | Msa1163650 | -0.810356 | 1.200648e-50 | -8.615850e-47 |
| Msa0259210 | Msa1163650 | -0.826244 | 3.017121e-54 | -8.615850e-47 |
| Msa0259220 | Msa1163650 | -0.803129 | 4.039006e-49 | -8.615850e-47 |
| Msa0259500 | Msa1163650 | -0.803990 | 2.678014e-49 | -8.615850e-47 |
| Msa0277450 | Msa1163650 | -0.839280 | 1.741561e-57 | -8.615850e-47 |
| Msa0284410 | Msa1163650 | -0.802747 | 4.845192e-49 | -8.615850e-47 |
| Msa0292120 | Msa1163650 | -0.819689 | 1.018123e-52 | -8.615850e-47 |
| Msa0294560 | Msa1163650 | 0.823458 | 1.370160e-53 | -8.615850e-47 |
| Msa0297790 | Msa1163650 | -0.816519 | 5.304927e-52 | -8.615850e-47 |
| Msa0300690 | Msa1163650 | -0.814861 | 1.241742e-51 | -8.615850e-47 |
| Msa0306210 | Msa1163650 | 0.874197 | 8.153733e-68 | -8.615850e-47 |
| Msa0317160 | Msa1163650 | -0.825686 | 4.093982e-54 | -8.615850e-47 |
| Msa0333330 | Msa1163650 | 0.801468 | 8.877313e-49 | -8.615850e-47 |
| Msa0333720 | Msa1163650 | 0.805217 | 1.484759e-49 | -8.615850e-47 |
| Msa0335800 | Msa1163650 | -0.838420 | 2.906037e-57 | -8.615850e-47 |
| Msa0336310 | Msa1163650 | -0.824740 | 6.854048e-54 | -8.615850e-47 |
| Msa0336320 | Msa1163650 | -0.841192 | 5.515920e-58 | -8.615850e-47 |
| Msa0341050 | Msa1163650 | -0.800087 | 1.698834e-48 | -8.615850e-47 |
| Msa0343850 | Msa1163650 | -0.803965 | 2.709450e-49 | -8.615850e-47 |
| Msa0345330 | Msa1163650 | -0.812784 | 3.560982e-51 | -8.615850e-47 |
| Msa0345410 | Msa1163650 | -0.803873 | 2.831616e-49 | -8.615850e-47 |
| Msa0345970 | Msa1163650 | -0.805780 | 1.131319e-49 | -8.615850e-47 |
| Msa0357340 | Msa1163650 | -0.801945 | 7.086891e-49 | -8.615850e-47 |
| Msa1116130 | Msa1163650 | 0.849812 | 2.542290e-60 | -8.615850e-47 |
| Msa1121450 | Msa1163650 | 0.808709 | 2.711194e-50 | -8.615850e-47 |
| Msa1123380 | Msa1163650 | -0.801473 | 8.855099e-49 | -8.615850e-47 |
| Msa1126450 | Msa1163650 | -0.807891 | 4.049376e-50 | -8.615850e-47 |
| Msa1130270 | Msa1163650 | 0.827265 | 1.720725e-54 | -8.615850e-47 |
| Msa1137570 | Msa1163650 | -0.832363 | 9.867638e-56 | -8.615850e-47 |
| Msa1139000 | Msa1163650 | 0.837460 | 5.132262e-57 | -8.615850e-47 |
| Msa1145250 | Msa1163650 | 0.832846 | 7.486935e-56 | -8.615850e-47 |
| Msa1154280 | Msa1163650 | -0.801916 | 7.183698e-49 | -8.615850e-47 |
| Msa1162550 | Msa1163650 | 0.823691 | 1.208518e-53 | -8.615850e-47 |
| Msa1163650 | Msa1167340 | -0.800523 | 1.384582e-48 | -8.615850e-47 |
| Msa1163650 | Msa1168580 | -0.804135 | 2.498305e-49 | -8.615850e-47 |
| Msa1163650 | Msa1173100 | -0.806522 | 7.898137e-50 | -8.615850e-47 |
| Msa1163650 | Msa1190890 | 0.808136 | 3.592666e-50 | -8.615850e-47 |
| Msa1163650 | Msa1191890 | 0.809952 | 1.467350e-50 | -8.615850e-47 |
| Msa1163650 | Msa1201430 | 0.806228 | 9.110444e-50 | -8.615850e-47 |
| Msa1163650 | Msa1204100 | 0.839553 | 1.479411e-57 | -8.615850e-47 |
| Msa1163650 | Msa1207470 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa1163650 | Msa1208890 | 0.847081 | 1.449420e-59 | -8.615850e-47 |
| Msa1163650 | Msa1211140 | 0.825881 | 3.679788e-54 | -8.615850e-47 |
| Msa1163650 | Msa1211150 | 0.821303 | 4.337328e-53 | -8.615850e-47 |
| Msa1163650 | Msa1218280 | 0.805921 | 1.056674e-49 | -8.615850e-47 |
| Msa1163650 | Msa1227460 | -0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa1163650 | Msa1234560 | 0.812681 | 3.751377e-51 | -8.615850e-47 |
| Msa1163650 | Msa1242240 | -0.804040 | 2.614727e-49 | -8.615850e-47 |
| Msa1163650 | Msa1242580 | 0.804233 | 2.383904e-49 | -8.615850e-47 |
| Msa1163650 | Msa1244720 | 0.805531 | 1.276241e-49 | -8.615850e-47 |
| Msa1163650 | Msa1245940 | 0.849165 | 3.852332e-60 | -8.615850e-47 |
| Msa1163650 | Msa1259070 | 0.848433 | 6.147988e-60 | -8.615850e-47 |
| Msa1163650 | Msa1259590 | 0.831312 | 1.792651e-55 | -8.615850e-47 |
| Msa1163650 | Msa1269580 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa1163650 | Msa1270420 | -0.806292 | 8.830974e-50 | -8.615850e-47 |
| Msa1163650 | Msa1283840 | -0.820813 | 5.625928e-53 | -8.615850e-47 |
| Msa1163650 | Msa1284260 | -0.832689 | 8.191037e-56 | -8.615850e-47 |
| Msa1163650 | Msa1296460 | 0.847698 | 9.810983e-60 | -8.615850e-47 |
| Msa1163650 | Msa1298370 | -0.807303 | 5.397983e-50 | -8.615850e-47 |
| Msa1163650 | Msa1299290 | 0.821245 | 4.472844e-53 | -8.615850e-47 |
| Msa1163650 | Msa1299300 | 0.810204 | 1.294990e-50 | -8.615850e-47 |
| Msa1163650 | Msa1306840 | -0.812033 | 5.197145e-51 | -8.615850e-47 |
| Msa1163650 | Msa1310770 | 0.855010 | 8.402863e-62 | -8.615850e-47 |
| Msa1163650 | Msa1322860 | -0.806223 | 9.132424e-50 | -8.615850e-47 |
| Msa1163650 | Msa1325860 | 0.820524 | 6.555665e-53 | -8.615850e-47 |
| Msa1163650 | Msa1327050 | -0.837696 | 4.463298e-57 | -8.615850e-47 |
| Msa1163650 | Msa1329050 | 0.837098 | 6.350661e-57 | -8.615850e-47 |
| Msa1163650 | Msa1332040 | 0.838954 | 2.114818e-57 | -8.615850e-47 |
| Msa1163650 | Msa1332870 | 0.804711 | 1.894573e-49 | -8.615850e-47 |
| Msa1163650 | Msa1353470 | -0.800804 | 1.213648e-48 | -8.615850e-47 |
| Msa1163650 | Msa1353980 | -0.810047 | 1.399335e-50 | -8.615850e-47 |
| Msa1163650 | Msa1357890 | -0.817119 | 3.890272e-52 | -8.615850e-47 |
| Msa1163650 | Msa1360980 | -0.832044 | 1.183302e-55 | -8.615850e-47 |
| Msa1163650 | Msa1364470 | 0.809830 | 1.558921e-50 | -8.615850e-47 |
| Msa1163650 | Msa1366340 | -0.801356 | 9.359636e-49 | -8.615850e-47 |
| Msa1163650 | Msa1376090 | 0.962713 | 3.316876e-121 | -8.615850e-47 |
| Msa1163650 | Msa1377540 | 0.975632 | 2.606738e-140 | -8.615850e-47 |
| Msa1163650 | Msa1379500 | -0.807182 | 5.727607e-50 | -8.615850e-47 |
| Msa1163650 | Msa1379590 | -0.812670 | 3.772861e-51 | -8.615850e-47 |
| Msa1163650 | Msa1382540 | -0.812729 | 3.661989e-51 | -8.615850e-47 |
| Msa1163650 | Msa1385890 | -0.822697 | 2.061986e-53 | -8.615850e-47 |
| Msa1163650 | Msa1386710 | -0.844898 | 5.684430e-59 | -8.615850e-47 |
| Msa1163650 | Msa1390690 | -0.813905 | 2.020448e-51 | -8.615850e-47 |
| Msa1163650 | Msa1390700 | -0.835858 | 1.313509e-56 | -8.615850e-47 |
| Msa1163650 | Msa1392900 | -0.804741 | 1.867347e-49 | -8.615850e-47 |
| Msa1163650 | Msa1392910 | -0.824405 | 8.218152e-54 | -8.615850e-47 |
| Msa1163650 | Msa1398090 | -0.823338 | 1.461506e-53 | -8.615850e-47 |
| Msa1163650 | Msa1400610 | 0.842315 | 2.787878e-58 | -8.615850e-47 |
| Msa1163650 | Msa1403340 | -0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa1163650 | Msa1408760 | 0.803955 | 2.722253e-49 | -8.615850e-47 |
| Msa1163650 | Msa1416370 | -0.806355 | 8.562662e-50 | -8.615850e-47 |
| Msa1163650 | Msa1423350 | -0.811282 | 7.567476e-51 | -8.615850e-47 |
| Msa1163650 | Msa1424640 | -0.812529 | 4.050614e-51 | -8.615850e-47 |
| Msa1163650 | Msa1444510 | -0.806186 | 9.296511e-50 | -8.615850e-47 |
| Msa1163650 | Msa1445390 | 0.863981 | 1.688009e-64 | -8.615850e-47 |
| Msa1163650 | Msa1445610 | 0.823660 | 1.229207e-53 | -8.615850e-47 |
| Msa1163650 | Msa1449340 | 0.872418 | 3.228793e-67 | -8.615850e-47 |
| Msa1163650 | Msa1457100 | -0.803655 | 3.143090e-49 | -8.615850e-47 |
| Msa1163650 | Msa1461300 | -0.806940 | 6.443504e-50 | -8.615850e-47 |
| Msa1163650 | Msa1466540 | -0.827205 | 1.779342e-54 | -8.615850e-47 |
| Msa0507680 | Msa1163650 | -0.810459 | 1.140518e-50 | -8.615850e-47 |
| Msa0523460 | Msa1163650 | -0.810209 | 1.291227e-50 | -8.615850e-47 |
| Msa0572840 | Msa1163650 | -0.800217 | 1.598423e-48 | -8.615850e-47 |
| Msa0577500 | Msa1163650 | -0.807333 | 5.319697e-50 | -8.615850e-47 |
| Msa0585000 | Msa1163650 | 0.806967 | 6.360539e-50 | -8.615850e-47 |
| Msa0594660 | Msa1163650 | -0.813884 | 2.041416e-51 | -8.615850e-47 |
| Msa0843780 | Msa1163650 | 0.857126 | 2.018267e-62 | -8.615850e-47 |
| Msa0861090 | Msa1163650 | -0.820718 | 5.914353e-53 | -8.615850e-47 |
| Msa0864470 | Msa1163650 | 0.801742 | 7.801592e-49 | -8.615850e-47 |
| Msa0922410 | Msa1163650 | -0.806161 | 9.407671e-50 | -8.615850e-47 |
| Msa0942550 | Msa1163650 | 0.873476 | 1.427467e-67 | -8.615850e-47 |
| Msa0942560 | Msa1163650 | 0.882053 | 1.437681e-70 | -8.615850e-47 |
| Msa0946280 | Msa1163650 | 0.809540 | 1.799228e-50 | -8.615850e-47 |
| Msa0947660 | Msa1163650 | -0.821092 | 4.851538e-53 | -8.615850e-47 |
| Msa0962840 | Msa1163650 | -0.805714 | 1.168101e-49 | -8.615850e-47 |
| Msa0972100 | Msa1163650 | -0.804663 | 1.938748e-49 | -8.615850e-47 |
| Msa0977180 | Msa1163650 | 0.802046 | 6.755045e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163650 | MtrunA17_Chr7g0260951 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163650 | AT3G58180.1 | 75.884 | 311 | 75 | 0 | 7 | 317 | 4 | 314 | 2.44e-169 | 473 |
| Msa1163650 | AT3G62530.1 | 50.968 | 155 | 69 | 2 | 151 | 304 | 68 | 216 | 1.39e-41 | 144 |
| Msa1163650 | AT3G62530.1 | 36.923 | 130 | 78 | 3 | 22 | 150 | 92 | 218 | 2.71e-13 | 68.6 |
Find 82 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTCTCGATGAGGAAAA+AGG | 0.236522 | 7_4:+55000079 | Msa1163650:CDS |
| CCTCGCACCGCCCTTATTCT+AGG | 0.251159 | 7_4:+54998987 | Msa1163650:CDS |
| TGCTGCTATTGTTGATTCCT+TGG | 0.290741 | 7_4:+55000162 | Msa1163650:CDS |
| ATTCACATCTCTAAGTATAT+TGG | 0.307934 | 7_4:-55000604 | None:intergenic |
| AAGCAGCTTTGTCTTGCAAT+TGG | 0.318055 | 7_4:-55000569 | None:intergenic |
| CACGAAGCTGCATTTGCATT+AGG | 0.319693 | 7_4:+54999541 | Msa1163650:CDS |
| AAAGGGAGTAACCTAGAATA+AGG | 0.319941 | 7_4:-54998998 | None:intergenic |
| GAAGCCCTTGGTTCAATTGC+AGG | 0.331761 | 7_4:+55000657 | Msa1163650:CDS |
| TGAAGCGTTCGGAGATTGGC+TGG | 0.334155 | 7_4:-54998926 | None:intergenic |
| ATAAGGGCGGTGCGAGGGGC+GGG | 0.339458 | 7_4:-54998981 | None:intergenic |
| ACGAAGCTGCATTTGCATTA+GGG | 0.353033 | 7_4:+54999542 | Msa1163650:CDS |
| ATGCTAGAATTTGAAAGATC+AGG | 0.354231 | 7_4:+55001864 | Msa1163650:CDS |
| CAAGAGCTGGCCGGTGCTGC+AGG | 0.367951 | 7_4:-54999938 | None:intergenic |
| TGCGAGGGGCGGGGCCTTTG+AGG | 0.372831 | 7_4:-54998971 | None:intergenic |
| TAAGGGCGGTGCGAGGGGCG+GGG | 0.381669 | 7_4:-54998980 | None:intergenic |
| CTTTGTGCAACAAGAGGCTC+TGG | 0.382092 | 7_4:-55001822 | None:intergenic |
| CGGAGGCGATCGGCGAGTTC+AGG | 0.384147 | 7_4:-54998742 | None:intergenic |
| GCTGAAGCACTAGGCGCTAT+TGG | 0.386313 | 7_4:+54999749 | Msa1163650:CDS |
| GCTGCTATTGTTGATTCCTT+GGG | 0.393386 | 7_4:+55000163 | Msa1163650:CDS |
| AATAAGGGCGGTGCGAGGGG+CGG | 0.393478 | 7_4:-54998982 | None:intergenic |
| AAGAGATTCATCGAATTTGT+TGG | 0.413615 | 7_4:+54999516 | Msa1163650:CDS |
| GTTCTTCAGTTGGTCAACTA+AGG | 0.420278 | 7_4:+54999960 | Msa1163650:CDS |
| GAAAACGTTTAATGTACAAT+TGG | 0.420894 | 7_4:-55002001 | None:intergenic |
| GGGTGGAGAGACTTTCGTTT+CGG | 0.422867 | 7_4:+55002586 | Msa1163650:three_prime_UTR |
| ATGTTTCAATAAAGCACTCT+TGG | 0.443976 | 7_4:-55000188 | None:intergenic |
| GCTCTGAAGCGTTCGGAGAT+TGG | 0.445480 | 7_4:-54998930 | None:intergenic |
| CAATTGGAGGACGCATGAAC+AGG | 0.447305 | 7_4:-55001985 | None:intergenic |
| CTTCAAGAAGGTATACACTT+TGG | 0.450900 | 7_4:-55001785 | None:intergenic |
| GCCAGCTCTTGTTCTTCAGT+TGG | 0.457141 | 7_4:+54999950 | Msa1163650:CDS |
| GTCTGTTGATCCTGCAGCAC+CGG | 0.466493 | 7_4:+54999928 | Msa1163650:CDS |
| GAAGAGTGCTCTGAAGCGTT+CGG | 0.477233 | 7_4:-54998937 | None:intergenic |
| ACTACCTCATGGCGAACAAT+GGG | 0.478742 | 7_4:-54999628 | None:intergenic |
| GTTTCTCGAACCTCTTGAGC+TGG | 0.484293 | 7_4:-54999818 | None:intergenic |
| GCAGGATCAACAGACTTAAA+CGG | 0.491292 | 7_4:-54999920 | None:intergenic |
| AACTGAGGTTAATGCAGGTA+TGG | 0.493370 | 7_4:-54999584 | None:intergenic |
| GCTTAGGCAGCTGAAGCACT+AGG | 0.495965 | 7_4:+54999740 | Msa1163650:intron |
| GAAGCGTTCGGAGATTGGCT+GGG | 0.496757 | 7_4:-54998925 | None:intergenic |
| AACGTTTAATGTACAATTGG+AGG | 0.500470 | 7_4:-55001998 | None:intergenic |
| TAGAATAAGGGCGGTGCGAG+GGG | 0.501591 | 7_4:-54998985 | None:intergenic |
| AGAAAGTTGCTGATTGTGAC+AGG | 0.506378 | 7_4:+55002565 | Msa1163650:three_prime_UTR |
| TGCTAGAATTTGAAAGATCA+GGG | 0.509212 | 7_4:+55001865 | Msa1163650:CDS |
| GTTCCTGTGCGAGTTGCTGT+TGG | 0.510297 | 7_4:+54998896 | Msa1163650:CDS |
| TACTACCTCATGGCGAACAA+TGG | 0.510393 | 7_4:-54999629 | None:intergenic |
| AAGATCAGGGAAATCGTTTG+AGG | 0.512480 | 7_4:+55001878 | Msa1163650:CDS |
| CATGAGGCTGCTGAAGCCCT+TGG | 0.515557 | 7_4:+55000645 | Msa1163650:CDS |
| GCAGCCTCATGTCTAACCAT+TGG | 0.519278 | 7_4:-55000633 | None:intergenic |
| CGGTGTCTGACGGAGGCGAT+CGG | 0.528678 | 7_4:-54998752 | None:intergenic |
| CGCTTCGTGCTCATCAGAGA+TGG | 0.529035 | 7_4:+54998869 | Msa1163650:CDS |
| CTAGAATAAGGGCGGTGCGA+GGG | 0.531517 | 7_4:-54998986 | None:intergenic |
| TTCTCTCTTCGCAACCTCAA+AGG | 0.536423 | 7_4:+54998957 | Msa1163650:CDS |
| GGATTCTGATCCAGCTCAAG+AGG | 0.544300 | 7_4:+54999808 | Msa1163650:CDS |
| AAGGGAGTAACCTAGAATAA+GGG | 0.546220 | 7_4:-54998997 | None:intergenic |
| ACCAACTGAAGAACAAGAGC+TGG | 0.552840 | 7_4:-54999951 | None:intergenic |
| TGACAACTTTGTGCAACAAG+AGG | 0.553059 | 7_4:-55001828 | None:intergenic |
| GACTTAAACGGAGAAATAGC+AGG | 0.567631 | 7_4:-54999908 | None:intergenic |
| GTTTCAGATACTTATTGAGT+CGG | 0.568670 | 7_4:+55002615 | Msa1163650:three_prime_UTR |
| TTAAGAACTGAGGTTAATGC+AGG | 0.570810 | 7_4:-54999589 | None:intergenic |
| CGCATGAGATTGAAGTGACA+AGG | 0.571112 | 7_4:+55002065 | Msa1163650:three_prime_UTR |
| AGTCCAACAGCAACTCGCAC+AGG | 0.572500 | 7_4:-54998899 | None:intergenic |
| TAAAGCACTCTTGGAACCCA+AGG | 0.578502 | 7_4:-55000179 | None:intergenic |
| GAGTGCTTTATTGAAACATG+AGG | 0.578510 | 7_4:+55000192 | Msa1163650:CDS |
| ATGGCGAACAATGGGATGCA+AGG | 0.582507 | 7_4:-54999620 | None:intergenic |
| TTTGCACTTCGAAATGATGG+TGG | 0.586504 | 7_4:+55000127 | Msa1163650:CDS |
| TAGGGATTTACTTCTCGATG+AGG | 0.598291 | 7_4:+55000072 | Msa1163650:intron |
| AGAGTGTGGGCTTATGAAGA+CGG | 0.609485 | 7_4:-54998793 | None:intergenic |
| CTGCCGAAAATTCTTCAAGA+AGG | 0.610074 | 7_4:-55001797 | None:intergenic |
| GCATCCCATTGTTCGCCATG+AGG | 0.616911 | 7_4:+54999624 | Msa1163650:CDS |
| ACTGAAGAACAAGAGCTGGC+CGG | 0.622351 | 7_4:-54999947 | None:intergenic |
| AAAATTGTGAGAAGAGAGTG+TGG | 0.624309 | 7_4:-54998807 | None:intergenic |
| CTTGTCACTTCAATCTCATG+CGG | 0.624776 | 7_4:-55002064 | None:intergenic |
| CCTAGAATAAGGGCGGTGCG+AGG | 0.629672 | 7_4:-54998987 | None:intergenic |
| AATACCTGCAATTGAACCAA+GGG | 0.629721 | 7_4:-55000661 | None:intergenic |
| GCATCCAATGGTTAGACATG+AGG | 0.635787 | 7_4:+55000629 | Msa1163650:CDS |
| CAATACCTGCAATTGAACCA+AGG | 0.638670 | 7_4:-55000662 | None:intergenic |
| AGATGTGAATGAGCATCCAA+TGG | 0.641853 | 7_4:+55000617 | Msa1163650:CDS |
| GGAAAGATCATTAAGAACTG+AGG | 0.652674 | 7_4:-54999599 | None:intergenic |
| TTTGTGCAACAAGAGGCTCT+GGG | 0.657645 | 7_4:-55001821 | None:intergenic |
| AAATTGTGAGAAGAGAGTGT+GGG | 0.702881 | 7_4:-54998806 | None:intergenic |
| ACAGCAAAATAACGTAGACA+CGG | 0.706456 | 7_4:+55002088 | Msa1163650:three_prime_UTR |
| GGAGTAACCTAGAATAAGGG+CGG | 0.721114 | 7_4:-54998994 | None:intergenic |
| AGTTGCTGATTGTGACAGGG+TGG | 0.738672 | 7_4:+55002569 | Msa1163650:three_prime_UTR |
| GAAAGTTGCTGATTGTGACA+GGG | 0.739025 | 7_4:+55002566 | Msa1163650:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAGTTATTTTTATGTTA+AGG | - | chr7_4:54999311-54999330 | None:intergenic | 10.0% |
| !!! | GGTTTTAAATTAATAATATT+AGG | + | chr7_4:55000053-55000072 | Msa1163650:intron | 10.0% |
| !!! | TTTTTAATCTATCTTCTATT+TGG | + | chr7_4:55001310-55001329 | Msa1163650:intron | 15.0% |
| !!! | ATTTTAACATTATTTACTTG+TGG | + | chr7_4:55002305-55002324 | Msa1163650:intron | 15.0% |
| !!! | TTTTTGTTTATAGTTCATTG+CGG | + | chr7_4:54999193-54999212 | Msa1163650:intron | 20.0% |
| !! | ATAAGTTGTTTATCCAAATA+GGG | + | chr7_4:54999285-54999304 | Msa1163650:intron | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | + | chr7_4:54999413-54999432 | Msa1163650:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | + | chr7_4:54999414-54999433 | Msa1163650:intron | 20.0% |
| !!! | TGCATTTATCTTTTTATACA+TGG | - | chr7_4:55000771-55000790 | None:intergenic | 20.0% |
| !! | TTTGAATAGTAAAAACTAAC+AGG | - | chr7_4:55001020-55001039 | None:intergenic | 20.0% |
| !!! | TTTTAAAGTTTTATGCTTCT+TGG | + | chr7_4:55001044-55001063 | Msa1163650:intron | 20.0% |
| !!! | AAATTCATGTTTTAGTGATT+TGG | - | chr7_4:55001381-55001400 | None:intergenic | 20.0% |
| !! | AAACATGAATTTATTTCCTT+TGG | + | chr7_4:55001389-55001408 | Msa1163650:intron | 20.0% |
| !!! | GTTCTATGTTTAGTAAATTT+TGG | - | chr7_4:55001441-55001460 | None:intergenic | 20.0% |
| !! | AATTAAATAGAAGTCAAACT+TGG | - | chr7_4:55001611-55001630 | None:intergenic | 20.0% |
| !! | AGTGATAAATAAAAACATTG+AGG | - | chr7_4:55001689-55001708 | None:intergenic | 20.0% |
| ! | AATTGAAGAGAAAAGGAAAA+GGG | - | chr7_4:54999018-54999037 | None:intergenic | 25.0% |
| ! | AAATTGAAGAGAAAAGGAAA+AGG | - | chr7_4:54999019-54999038 | None:intergenic | 25.0% |
| ! | CTTGAAAAGTTGAAGTAAAA+TGG | - | chr7_4:54999169-54999188 | None:intergenic | 25.0% |
| ! | GCAATGAACTATAAACAAAA+AGG | - | chr7_4:54999194-54999213 | None:intergenic | 25.0% |
| ! | GATAAGTTGTTTATCCAAAT+AGG | + | chr7_4:54999284-54999303 | Msa1163650:intron | 25.0% |
| ! | CTAAGTTGTTTATCCAAATA+GGG | + | chr7_4:54999345-54999364 | Msa1163650:intron | 25.0% |
| ! | TTGTTAAGTGTATTATTGCA+TGG | + | chr7_4:54999457-54999476 | Msa1163650:intron | 25.0% |
| !! | TAATTTGTATGTTGCTAACT+CGG | + | chr7_4:55000032-55000051 | Msa1163650:intron | 25.0% |
| ! | AAAAATTCAGAGAATCAAAC+AGG | - | chr7_4:55000505-55000524 | None:intergenic | 25.0% |
| !!! | ACTGTATTTGCTGAAATTTT+AGG | + | chr7_4:55000530-55000549 | Msa1163650:intron | 25.0% |
| !!! | ATTTTAGGTTGCATATGTTT+TGG | + | chr7_4:55000545-55000564 | Msa1163650:intron | 25.0% |
| !!! | TTTTAGGTTGCATATGTTTT+GGG | + | chr7_4:55000546-55000565 | Msa1163650:intron | 25.0% |
| ! | ATTCACATCTCTAAGTATAT+TGG | - | chr7_4:55000607-55000626 | None:intergenic | 25.0% |
| ! | ATGGTATTAATATTGCTTTG+TGG | + | chr7_4:55000739-55000758 | Msa1163650:intron | 25.0% |
| !! | GTCTAAGTAAATGTTCTTTT+TGG | + | chr7_4:55000839-55000858 | Msa1163650:intron | 25.0% |
| !! | GTTGCAACTTTTAGTATTTA+TGG | + | chr7_4:55000894-55000913 | Msa1163650:intron | 25.0% |
| ! | GTTTGCAAATAAAAAAGTAG+AGG | + | chr7_4:55000980-55000999 | Msa1163650:intron | 25.0% |
| !! | AAATAAAAAAGTAGAGGTGT+TGG | + | chr7_4:55000986-55001005 | Msa1163650:intron | 25.0% |
| ! | TTGGTTCAACTAAAAAAGTT+GGG | - | chr7_4:55001422-55001441 | None:intergenic | 25.0% |
| !! | TTTGGTTCAACTAAAAAAGT+TGG | - | chr7_4:55001423-55001442 | None:intergenic | 25.0% |
| ! | ATTAAACTGAAGTCAAACTT+GGG | - | chr7_4:55001518-55001537 | None:intergenic | 25.0% |
| ! | AATTAAACTGAAGTCAAACT+TGG | - | chr7_4:55001519-55001538 | None:intergenic | 25.0% |
| ! | ACAAAAGAACTATGTAAACA+GGG | - | chr7_4:55001748-55001767 | None:intergenic | 25.0% |
| !! | ATACCTTCTTGAAGAATTTT+CGG | + | chr7_4:55001794-55001813 | Msa1163650:CDS | 25.0% |
| ! | GAAAACGTTTAATGTACAAT+TGG | - | chr7_4:55002004-55002023 | None:intergenic | 25.0% |
| !! | GTACATTAAACGTTTTCTTA+TGG | + | chr7_4:55002007-55002026 | Msa1163650:exon | 25.0% |
| ! | ATTTCTTAACTCAAAGTTGA+TGG | + | chr7_4:55002131-55002150 | Msa1163650:intron | 25.0% |
| !! | TAAAAGGTAGACTTTACTTT+TGG | - | chr7_4:55002257-55002276 | None:intergenic | 25.0% |
| ! | GTTATTCTTAGTTATGATTG+AGG | - | chr7_4:55002448-55002467 | None:intergenic | 25.0% |
| ! | AAGCACTTTGAATTACATAT+AGG | - | chr7_4:55002525-55002544 | None:intergenic | 25.0% |
| GCTGTAAAATTGAAGAGAAA+AGG | - | chr7_4:54999025-54999044 | None:intergenic | 30.0% | |
| AATACATGTTTCATTCTGGA+AGG | - | chr7_4:54999113-54999132 | None:intergenic | 30.0% | |
| TTCCAGAATGAAACATGTAT+TGG | + | chr7_4:54999112-54999131 | Msa1163650:intron | 30.0% | |
| TTCCAATACATGTTTCATTC+TGG | - | chr7_4:54999117-54999136 | None:intergenic | 30.0% | |
| ! | TTTTATGTTAAGGCCCTATT+TGG | - | chr7_4:54999301-54999320 | None:intergenic | 30.0% |
| GCTAAGTTGTTTATCCAAAT+AGG | + | chr7_4:54999344-54999363 | Msa1163650:intron | 30.0% | |
| TGATTGATTAAGTCCCTATT+TGG | - | chr7_4:54999430-54999449 | None:intergenic | 30.0% | |
| AAGAGATTCATCGAATTTGT+TGG | + | chr7_4:54999516-54999535 | Msa1163650:CDS | 30.0% | |
| TCAGAAAAGGAAGAAATAGA+AGG | - | chr7_4:54999664-54999683 | None:intergenic | 30.0% | |
| AAAAGTGACACATTCAGAAA+AGG | - | chr7_4:54999677-54999696 | None:intergenic | 30.0% | |
| TGTTTGTTTCAATCTTGCTT+AGG | + | chr7_4:54999724-54999743 | Msa1163650:intron | 30.0% | |
| !!! | TTCTCTTTTGAAGCATAGTT+TGG | + | chr7_4:54999787-54999806 | Msa1163650:CDS | 30.0% |
| AACATACAAATTACTCTCTC+TGG | - | chr7_4:55000025-55000044 | None:intergenic | 30.0% | |
| ! | ATGTTTCAATAAAGCACTCT+TGG | - | chr7_4:55000191-55000210 | None:intergenic | 30.0% |
| ! | GTTTAAAAGTACGAACGATA+TGG | - | chr7_4:55000338-55000357 | None:intergenic | 30.0% |
| CATTGAACCATTATATTCGT+TGG | + | chr7_4:55000357-55000376 | Msa1163650:intron | 30.0% | |
| AAAGTTAAGCAGCAACATTA+AGG | - | chr7_4:55000475-55000494 | None:intergenic | 30.0% | |
| ! | GCATTTAAAACCACATACTA+TGG | + | chr7_4:55000684-55000703 | Msa1163650:intron | 30.0% |
| ! | TATATTATTGACTGCAACAG+AGG | - | chr7_4:55000720-55000739 | None:intergenic | 30.0% |
| CTGTTGCAGTCAATAATATA+TGG | + | chr7_4:55000720-55000739 | Msa1163650:intron | 30.0% | |
| !! | AAAGTTTTATGCTTCTTGGT+TGG | + | chr7_4:55001048-55001067 | Msa1163650:intron | 30.0% |
| GTAGATACTTCTTTGTGATT+TGG | + | chr7_4:55001251-55001270 | Msa1163650:intron | 30.0% | |
| GACTAAACAGACTATATAAC+AGG | - | chr7_4:55001277-55001296 | None:intergenic | 30.0% | |
| TGGTTCAACTAAAAAAGTTG+GGG | - | chr7_4:55001421-55001440 | None:intergenic | 30.0% | |
| !! | CTTCTATTTAATTTTGCCTC+TGG | + | chr7_4:55001618-55001637 | Msa1163650:intron | 30.0% |
| GACAAAAGAACTATGTAAAC+AGG | - | chr7_4:55001749-55001768 | None:intergenic | 30.0% | |
| ATGCTAGAATTTGAAAGATC+AGG | + | chr7_4:55001864-55001883 | Msa1163650:CDS | 30.0% | |
| TGCTAGAATTTGAAAGATCA+GGG | + | chr7_4:55001865-55001884 | Msa1163650:CDS | 30.0% | |
| ! | ACACTACTATCTTTTTCTCT+TGG | + | chr7_4:55001954-55001973 | Msa1163650:intron | 30.0% |
| AACGTTTAATGTACAATTGG+AGG | - | chr7_4:55002001-55002020 | None:intergenic | 30.0% | |
| AAAACTAGCCCTATAAAACA+AGG | + | chr7_4:55002162-55002181 | Msa1163650:intron | 30.0% | |
| AAACTAGCCCTATAAAACAA+GGG | + | chr7_4:55002163-55002182 | Msa1163650:intron | 30.0% | |
| !!! | AGTTCAACCCTTGTTTTATA+GGG | - | chr7_4:55002173-55002192 | None:intergenic | 30.0% |
| ! | AGAAACATTTTGTGATGCAT+TGG | + | chr7_4:55002215-55002234 | Msa1163650:intron | 30.0% |
| GTGGAAAAATTGTAAAACTC+TGG | + | chr7_4:55002324-55002343 | Msa1163650:intron | 30.0% | |
| TCATACTTCATACCAAGATT+TGG | + | chr7_4:55002359-55002378 | Msa1163650:intron | 30.0% | |
| !! | TTACATGTATTTTGCTGTGA+TGG | + | chr7_4:55002468-55002487 | Msa1163650:intron | 30.0% |
| ! | AATTCAAAGTGCTTTGTTAC+AGG | + | chr7_4:55002531-55002550 | Msa1163650:intron | 30.0% |
| GTTTCAGATACTTATTGAGT+CGG | + | chr7_4:55002615-55002634 | Msa1163650:three_prime_UTR | 30.0% | |
| ! | AAATTGTGAGAAGAGAGTGT+GGG | - | chr7_4:54998809-54998828 | None:intergenic | 35.0% |
| AAAATTGTGAGAAGAGAGTG+TGG | - | chr7_4:54998810-54998829 | None:intergenic | 35.0% | |
| AAGGGAGTAACCTAGAATAA+GGG | - | chr7_4:54999000-54999019 | None:intergenic | 35.0% | |
| AAAGGGAGTAACCTAGAATA+AGG | - | chr7_4:54999001-54999020 | None:intergenic | 35.0% | |
| TTGTTTATAGTTCATTGCGG+AGG | + | chr7_4:54999196-54999215 | Msa1163650:intron | 35.0% | |
| ! | AACCAGCTTTTCTTTCTCTT+TGG | + | chr7_4:54999486-54999505 | Msa1163650:intron | 35.0% |
| TTAAGAACTGAGGTTAATGC+AGG | - | chr7_4:54999592-54999611 | None:intergenic | 35.0% | |
| GGAAAGATCATTAAGAACTG+AGG | - | chr7_4:54999602-54999621 | None:intergenic | 35.0% | |
| GAAGAAATAGAAGGCTACTA+CGG | - | chr7_4:54999655-54999674 | None:intergenic | 35.0% | |
| ! | TTGGTCAACTAAGGTTTGTT+TGG | + | chr7_4:54999969-54999988 | Msa1163650:intron | 35.0% |
| TTACTTCTCGATGAGGAAAA+AGG | + | chr7_4:55000079-55000098 | Msa1163650:CDS | 35.0% | |
| TACTTCTCGATGAGGAAAAA+GGG | + | chr7_4:55000080-55000099 | Msa1163650:CDS | 35.0% | |
| ! | CTTTTTGCACTTCGAAATGA+TGG | + | chr7_4:55000124-55000143 | Msa1163650:CDS | 35.0% |
| ! | GAGTGCTTTATTGAAACATG+AGG | + | chr7_4:55000192-55000211 | Msa1163650:CDS | 35.0% |
| TTGTATGAATTGCACGTAAG+TGG | + | chr7_4:55000266-55000285 | Msa1163650:intron | 35.0% | |
| ACTTCACATGAGAAAACATC+AGG | + | chr7_4:55000297-55000316 | Msa1163650:intron | 35.0% | |
| AAAACATCAGGTCAATCTAG+AGG | + | chr7_4:55000309-55000328 | Msa1163650:intron | 35.0% | |
| AAACATCAGGTCAATCTAGA+GGG | + | chr7_4:55000310-55000329 | Msa1163650:intron | 35.0% | |
| TTCTGCTCCAACGAATATAA+TGG | - | chr7_4:55000367-55000386 | None:intergenic | 35.0% | |
| AATACCTGCAATTGAACCAA+GGG | - | chr7_4:55000664-55000683 | None:intergenic | 35.0% | |
| TCACATGATTCCATAGTATG+TGG | - | chr7_4:55000697-55000716 | None:intergenic | 35.0% | |
| TGAGCAGTTCAACTTAACTT+AGG | + | chr7_4:55000872-55000891 | Msa1163650:intron | 35.0% | |
| TGACTCAGTTCATATCTGTA+TGG | + | chr7_4:55000917-55000936 | Msa1163650:intron | 35.0% | |
| !!! | CATATCTGTATGGTTTTGAC+TGG | + | chr7_4:55000927-55000946 | Msa1163650:intron | 35.0% |
| TTATGCTTCTTGGTTGGATT+TGG | + | chr7_4:55001054-55001073 | Msa1163650:intron | 35.0% | |
| AGCGTCTAACTATTAGTTCA+TGG | + | chr7_4:55001105-55001124 | Msa1163650:intron | 35.0% | |
| GCGTCTAACTATTAGTTCAT+GGG | + | chr7_4:55001106-55001125 | Msa1163650:intron | 35.0% | |
| !!! | GTTGGTTCTACCTTTTTACA+TGG | + | chr7_4:55001171-55001190 | Msa1163650:intron | 35.0% |
| ATTCGTTGGTCCATGTAAAA+AGG | - | chr7_4:55001184-55001203 | None:intergenic | 35.0% | |
| TAATACGTGACAAAGCCTTA+TGG | - | chr7_4:55001208-55001227 | None:intergenic | 35.0% | |
| !! | ATTTGGTCGACTCTTTTTAC+TGG | + | chr7_4:55001327-55001346 | Msa1163650:intron | 35.0% |
| ! | CTTCAAGAAGGTATACACTT+TGG | - | chr7_4:55001788-55001807 | None:intergenic | 35.0% |
| AAAATCTTCAGCAAGTACCA+AGG | - | chr7_4:55001910-55001929 | None:intergenic | 35.0% | |
| ACAGCAAAATAACGTAGACA+CGG | + | chr7_4:55002088-55002107 | Msa1163650:three_prime_UTR | 35.0% | |
| !! | AACTCAAAGTTGATGGAATC+AGG | + | chr7_4:55002138-55002157 | Msa1163650:intron | 35.0% |
| !!! | CAGTTCAACCCTTGTTTTAT+AGG | - | chr7_4:55002174-55002193 | None:intergenic | 35.0% |
| AGTGGCAGAGCTATAATAAA+AGG | - | chr7_4:55002273-55002292 | None:intergenic | 35.0% | |
| ATTTGGCTGACAACAGAATT+TGG | + | chr7_4:55002376-55002395 | Msa1163650:intron | 35.0% | |
| TTTGGCTGACAACAGAATTT+GGG | + | chr7_4:55002377-55002396 | Msa1163650:intron | 35.0% | |
| !! | GGGATTTTGATAAACTCTTG+AGG | + | chr7_4:55002397-55002416 | Msa1163650:intron | 35.0% |
| AGGTCAAGAATGAGAATAAC+TGG | + | chr7_4:55002417-55002436 | Msa1163650:intron | 35.0% | |
| ! | TCGCTGATTAAGTCCCTATT+TGG | - | chr7_4:54999361-54999380 | None:intergenic | 40.0% |
| TGCCAAAGAGAAAGAAAAGC+TGG | - | chr7_4:54999491-54999510 | None:intergenic | 40.0% | |
| ACGAAGCTGCATTTGCATTA+GGG | + | chr7_4:54999542-54999561 | Msa1163650:CDS | 40.0% | |
| AACTGAGGTTAATGCAGGTA+TGG | - | chr7_4:54999587-54999606 | None:intergenic | 40.0% | |
| GACTTAAACGGAGAAATAGC+AGG | - | chr7_4:54999911-54999930 | None:intergenic | 40.0% | |
| GCAGGATCAACAGACTTAAA+CGG | - | chr7_4:54999923-54999942 | None:intergenic | 40.0% | |
| GTTCTTCAGTTGGTCAACTA+AGG | + | chr7_4:54999960-54999979 | Msa1163650:CDS | 40.0% | |
| TAGGGATTTACTTCTCGATG+AGG | + | chr7_4:55000072-55000091 | Msa1163650:intron | 40.0% | |
| TTTGCACTTCGAAATGATGG+TGG | + | chr7_4:55000127-55000146 | Msa1163650:CDS | 40.0% | |
| !! | TGCTGCTATTGTTGATTCCT+TGG | + | chr7_4:55000162-55000181 | Msa1163650:CDS | 40.0% |
| !! | GCTGCTATTGTTGATTCCTT+GGG | + | chr7_4:55000163-55000182 | Msa1163650:CDS | 40.0% |
| ! | AAGCAGCTTTGTCTTGCAAT+TGG | - | chr7_4:55000572-55000591 | None:intergenic | 40.0% |
| AGATGTGAATGAGCATCCAA+TGG | + | chr7_4:55000617-55000636 | Msa1163650:CDS | 40.0% | |
| CAATACCTGCAATTGAACCA+AGG | - | chr7_4:55000665-55000684 | None:intergenic | 40.0% | |
| !! | AAAAGTAGAGGTGTTGGAGA+AGG | + | chr7_4:55000992-55001011 | Msa1163650:intron | 40.0% |
| GACAATCTTTCTGTTCTCGT+TGG | + | chr7_4:55001153-55001172 | Msa1163650:intron | 40.0% | |
| ATGGACCAACGAATACCATA+AGG | + | chr7_4:55001190-55001209 | Msa1163650:intron | 40.0% | |
| ! | CAAAGCCTTATGGTATTCGT+TGG | - | chr7_4:55001198-55001217 | None:intergenic | 40.0% |
| AGTCAAACTTGGGTAGCATT+TGG | - | chr7_4:55001508-55001527 | None:intergenic | 40.0% | |
| CTGCCGAAAATTCTTCAAGA+AGG | - | chr7_4:55001800-55001819 | None:intergenic | 40.0% | |
| TGACAACTTTGTGCAACAAG+AGG | - | chr7_4:55001831-55001850 | None:intergenic | 40.0% | |
| AAGATCAGGGAAATCGTTTG+AGG | + | chr7_4:55001878-55001897 | Msa1163650:CDS | 40.0% | |
| ! | ATCGTTTGAGGTATACACCT+TGG | + | chr7_4:55001890-55001909 | Msa1163650:intron | 40.0% |
| ! | CTTGTCACTTCAATCTCATG+CGG | - | chr7_4:55002067-55002086 | None:intergenic | 40.0% |
| TAACGTAGACACGGAAAAAC+TGG | + | chr7_4:55002097-55002116 | Msa1163650:three_prime_UTR | 40.0% | |
| ! | TTATTATAGCTCTGCCACTG+TGG | + | chr7_4:55002274-55002293 | Msa1163650:intron | 40.0% |
| TAAAATGTCTCCTACCACAG+TGG | - | chr7_4:55002291-55002310 | None:intergenic | 40.0% | |
| TTCTGTTGTCAGCCAAATCT+TGG | - | chr7_4:55002374-55002393 | None:intergenic | 40.0% | |
| ! | AGAAAGTTGCTGATTGTGAC+AGG | + | chr7_4:55002565-55002584 | Msa1163650:three_prime_UTR | 40.0% |
| ! | GAAAGTTGCTGATTGTGACA+GGG | + | chr7_4:55002566-55002585 | Msa1163650:three_prime_UTR | 40.0% |
| AGAGTGTGGGCTTATGAAGA+CGG | - | chr7_4:54998796-54998815 | None:intergenic | 45.0% | |
| TTCTCTCTTCGCAACCTCAA+AGG | + | chr7_4:54998957-54998976 | Msa1163650:CDS | 45.0% | |
| GGAGTAACCTAGAATAAGGG+CGG | - | chr7_4:54998997-54999016 | None:intergenic | 45.0% | |
| CACGAAGCTGCATTTGCATT+AGG | + | chr7_4:54999541-54999560 | Msa1163650:CDS | 45.0% | |
| ACTACCTCATGGCGAACAAT+GGG | - | chr7_4:54999631-54999650 | None:intergenic | 45.0% | |
| TACTACCTCATGGCGAACAA+TGG | - | chr7_4:54999632-54999651 | None:intergenic | 45.0% | |
| ACCAACTGAAGAACAAGAGC+TGG | - | chr7_4:54999954-54999973 | None:intergenic | 45.0% | |
| ! | TAAAGCACTCTTGGAACCCA+AGG | - | chr7_4:55000182-55000201 | None:intergenic | 45.0% |
| GCATCCAATGGTTAGACATG+AGG | + | chr7_4:55000629-55000648 | Msa1163650:CDS | 45.0% | |
| GTCTGTTTAGTCTCTGCATC+TGG | + | chr7_4:55001285-55001304 | Msa1163650:intron | 45.0% | |
| TTTGTGCAACAAGAGGCTCT+GGG | - | chr7_4:55001824-55001843 | None:intergenic | 45.0% | |
| CGCATGAGATTGAAGTGACA+AGG | + | chr7_4:55002065-55002084 | Msa1163650:three_prime_UTR | 45.0% | |
| !!! | GTTTTAAATTAATAATATTA+GGG | + | chr7_4:55000054-55000073 | Msa1163650:intron | 5.0% |
| !! | GAAGAGTGCTCTGAAGCGTT+CGG | - | chr7_4:54998940-54998959 | None:intergenic | 50.0% |
| ATGGCGAACAATGGGATGCA+AGG | - | chr7_4:54999623-54999642 | None:intergenic | 50.0% | |
| GCTACTACGGTACTACCTCA+TGG | - | chr7_4:54999642-54999661 | None:intergenic | 50.0% | |
| GGATTCTGATCCAGCTCAAG+AGG | + | chr7_4:54999808-54999827 | Msa1163650:CDS | 50.0% | |
| GTTTCTCGAACCTCTTGAGC+TGG | - | chr7_4:54999821-54999840 | None:intergenic | 50.0% | |
| ACTGAAGAACAAGAGCTGGC+CGG | - | chr7_4:54999950-54999969 | None:intergenic | 50.0% | |
| GCCAGCTCTTGTTCTTCAGT+TGG | + | chr7_4:54999950-54999969 | Msa1163650:CDS | 50.0% | |
| GCAGCCTCATGTCTAACCAT+TGG | - | chr7_4:55000636-55000655 | None:intergenic | 50.0% | |
| GAAGCCCTTGGTTCAATTGC+AGG | + | chr7_4:55000657-55000676 | Msa1163650:CDS | 50.0% | |
| AAAGTTGGGGAAGCTGCCAA+AGG | - | chr7_4:55001408-55001427 | None:intergenic | 50.0% | |
| CTGTCATGTGACTCTACCAG+AGG | - | chr7_4:55001637-55001656 | None:intergenic | 50.0% | |
| CTTTGTGCAACAAGAGGCTC+TGG | - | chr7_4:55001825-55001844 | None:intergenic | 50.0% | |
| CAATTGGAGGACGCATGAAC+AGG | - | chr7_4:55001988-55002007 | None:intergenic | 50.0% | |
| ! | TATAGCTCTGCCACTGTGGT+AGG | + | chr7_4:55002278-55002297 | Msa1163650:intron | 50.0% |
| ! | AGTTGCTGATTGTGACAGGG+TGG | + | chr7_4:55002569-55002588 | Msa1163650:three_prime_UTR | 50.0% |
| GGGTGGAGAGACTTTCGTTT+CGG | + | chr7_4:55002586-55002605 | Msa1163650:three_prime_UTR | 50.0% | |
| !! | GAAGACGGTGGCGGAATTGA+CGG | - | chr7_4:54998781-54998800 | None:intergenic | 55.0% |
| TGGGCTTATGAAGACGGTGG+CGG | - | chr7_4:54998790-54998809 | None:intergenic | 55.0% | |
| GTGTGGGCTTATGAAGACGG+TGG | - | chr7_4:54998793-54998812 | None:intergenic | 55.0% | |
| CGCTTCGTGCTCATCAGAGA+TGG | + | chr7_4:54998869-54998888 | Msa1163650:CDS | 55.0% | |
| GTTCCTGTGCGAGTTGCTGT+TGG | + | chr7_4:54998896-54998915 | Msa1163650:CDS | 55.0% | |
| AGTCCAACAGCAACTCGCAC+AGG | - | chr7_4:54998902-54998921 | None:intergenic | 55.0% | |
| ! | GAAGCGTTCGGAGATTGGCT+GGG | - | chr7_4:54998928-54998947 | None:intergenic | 55.0% |
| ! | TGAAGCGTTCGGAGATTGGC+TGG | - | chr7_4:54998929-54998948 | None:intergenic | 55.0% |
| !! | GCTCTGAAGCGTTCGGAGAT+TGG | - | chr7_4:54998933-54998952 | None:intergenic | 55.0% |
| TAGAATAAGGGCGGTGCGAG+GGG | - | chr7_4:54998988-54999007 | None:intergenic | 55.0% | |
| CTAGAATAAGGGCGGTGCGA+GGG | - | chr7_4:54998989-54999008 | None:intergenic | 55.0% | |
| GCATCCCATTGTTCGCCATG+AGG | + | chr7_4:54999624-54999643 | Msa1163650:CDS | 55.0% | |
| ! | GCTTAGGCAGCTGAAGCACT+AGG | + | chr7_4:54999740-54999759 | Msa1163650:intron | 55.0% |
| ! | GCTGAAGCACTAGGCGCTAT+TGG | + | chr7_4:54999749-54999768 | Msa1163650:CDS | 55.0% |
| GTCTGTTGATCCTGCAGCAC+CGG | + | chr7_4:54999928-54999947 | Msa1163650:CDS | 55.0% | |
| ! | TTGACGGTGGCGGTGTCTGA+CGG | - | chr7_4:54998765-54998784 | None:intergenic | 60.0% |
| CCTAGAATAAGGGCGGTGCG+AGG | - | chr7_4:54998990-54999009 | None:intergenic | 60.0% | |
| CCTCGCACCGCCCTTATTCT+AGG | + | chr7_4:54998987-54999006 | Msa1163650:CDS | 60.0% | |
| CATGAGGCTGCTGAAGCCCT+TGG | + | chr7_4:55000645-55000664 | Msa1163650:CDS | 60.0% | |
| CGGTGTCTGACGGAGGCGAT+CGG | - | chr7_4:54998755-54998774 | None:intergenic | 65.0% | |
| !! | GGTGGCGGAATTGACGGTGG+CGG | - | chr7_4:54998775-54998794 | None:intergenic | 65.0% |
| !! | GACGGTGGCGGAATTGACGG+TGG | - | chr7_4:54998778-54998797 | None:intergenic | 65.0% |
| AATAAGGGCGGTGCGAGGGG+CGG | - | chr7_4:54998985-54999004 | None:intergenic | 65.0% | |
| CGGAGGCGATCGGCGAGTTC+AGG | - | chr7_4:54998745-54998764 | None:intergenic | 70.0% | |
| ! | ACGGTGGCGGTGTCTGACGG+AGG | - | chr7_4:54998762-54998781 | None:intergenic | 70.0% |
| ATAAGGGCGGTGCGAGGGGC+GGG | - | chr7_4:54998984-54999003 | None:intergenic | 70.0% | |
| !! | CAAGAGCTGGCCGGTGCTGC+AGG | - | chr7_4:54999941-54999960 | None:intergenic | 70.0% |
| TGCGAGGGGCGGGGCCTTTG+AGG | - | chr7_4:54998974-54998993 | None:intergenic | 75.0% | |
| TAAGGGCGGTGCGAGGGGCG+GGG | - | chr7_4:54998983-54999002 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 54998736 | 55002681 | 54998736 | ID=Msa1163650;Name=Msa1163650 |
| chr7_4 | mRNA | 54998736 | 55002681 | 54998736 | ID=Msa1163650-mRNA-1;Parent=Msa1163650;Name=Msa1163650-mRNA-1;_AED=0.17;_eAED=0.17;_QI=76|1|1|1|0.75|0.66|9|232|317 |
| chr7_4 | exon | 54998736 | 54998764 | 54998736 | ID=Msa1163650-mRNA-1:exon:16070;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 54998796 | 54999008 | 54998796 | ID=Msa1163650-mRNA-1:exon:16071;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 54999512 | 54999645 | 54999512 | ID=Msa1163650-mRNA-1:exon:16072;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 54999746 | 54999981 | 54999746 | ID=Msa1163650-mRNA-1:exon:16073;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 55000075 | 55000213 | 55000075 | ID=Msa1163650-mRNA-1:exon:16074;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 55000552 | 55000678 | 55000552 | ID=Msa1163650-mRNA-1:exon:16075;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 55001781 | 55001899 | 55001781 | ID=Msa1163650-mRNA-1:exon:16076;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 55001983 | 55002118 | 55001983 | ID=Msa1163650-mRNA-1:exon:16077;Parent=Msa1163650-mRNA-1 |
| chr7_4 | exon | 55002553 | 55002681 | 55002553 | ID=Msa1163650-mRNA-1:exon:16078;Parent=Msa1163650-mRNA-1 |
| chr7_4 | five_prime_UTR | 54998736 | 54998764 | 54998736 | ID=Msa1163650-mRNA-1:five_prime_utr;Parent=Msa1163650-mRNA-1 |
| chr7_4 | five_prime_UTR | 54998796 | 54998842 | 54998796 | ID=Msa1163650-mRNA-1:five_prime_utr;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 54998843 | 54999008 | 54998843 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 54999512 | 54999645 | 54999512 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 54999746 | 54999981 | 54999746 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 55000075 | 55000213 | 55000075 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 55000552 | 55000678 | 55000552 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 55001781 | 55001899 | 55001781 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | CDS | 55001983 | 55002015 | 55001983 | ID=Msa1163650-mRNA-1:cds;Parent=Msa1163650-mRNA-1 |
| chr7_4 | three_prime_UTR | 55002016 | 55002118 | 55002016 | ID=Msa1163650-mRNA-1:three_prime_utr;Parent=Msa1163650-mRNA-1 |
| chr7_4 | three_prime_UTR | 55002553 | 55002681 | 55002553 | ID=Msa1163650-mRNA-1:three_prime_utr;Parent=Msa1163650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
