AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466010 MtrunA17_Chr3g0118541 96.278 618 23 0 1 618 11 628 0.0 1246
Msa0466010 MtrunA17_Chr3g0118251 51.792 614 279 10 12 616 13 618 0.0 599
Msa0466010 MtrunA17_Chr8g0384621 30.000 510 286 23 119 593 127 600 2.06e-50 184
Msa0466010 MtrunA17_Chr3g0118571 85.106 47 7 0 1 47 1 47 5.22e-22 89.7
Msa0466010 MtrunA17_Chr3g0107671 25.424 354 208 14 277 597 209 539 3.05e-20 94.7
Msa0466010 MtrunA17_Chr6g0451531 26.243 362 199 15 276 598 210 542 4.22e-20 94.4
Msa0466010 MtrunA17_Chr6g0451541 25.137 366 197 16 276 597 210 542 6.59e-17 84.3
Msa0466010 MtrunA17_Chr6g0451511 22.616 367 203 15 277 597 209 540 3.76e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466010 AT3G48090.1 41.680 631 307 16 11 608 8 610 2.78e-151 450
Msa0466010 AT3G48080.1 40.952 630 311 17 11 605 8 611 1.05e-144 434
Msa0466010 AT3G48090.2 44.722 521 239 12 117 608 2 502 1.27e-137 411
Msa0466010 AT3G52430.1 27.221 349 216 12 279 605 188 520 3.06e-29 122
Msa0466010 AT5G14930.2 22.750 400 227 16 228 598 162 508 5.20e-13 72.4

Find 159 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCCCATGTTTCTATATT+TGG 0.081103 3_3:+66525680 None:intergenic
TGGCCATTCTAGCAACATTT+TGG 0.165541 3_3:-66524359 Msa0466010:CDS
TCTTCCATTGAAAAGCTTAT+TGG 0.203770 3_3:-66524144 Msa0466010:CDS
GCACTCTTCAGGGGCTGTTT+TGG 0.210683 3_3:-66524379 Msa0466010:CDS
CTTCAAATGACGGTGATAAT+TGG 0.226494 3_3:+66522851 None:intergenic
CAAGTCACACTGTCTCTTAT+TGG 0.237776 3_3:+66524072 None:intergenic
GGATTTGCTCTGGCTTTAAA+TGG 0.261348 3_3:-66522351 Msa0466010:three_prime_UTR
CTTGTGCTGAATTTGGATTT+TGG 0.262348 3_3:+66524311 None:intergenic
GATTCTGTGATTTCTGCTTT+TGG 0.262651 3_3:+66522741 None:intergenic
GTGTTTACAGGGCACTCTTC+AGG 0.263760 3_3:-66524390 Msa0466010:CDS
CCATGTTGCTTGTAATCTAA+TGG 0.268851 3_3:-66524004 Msa0466010:CDS
GACTTGTGCTTGCAGGAGTA+TGG 0.270068 3_3:-66522989 Msa0466010:CDS
TATCTTGTTATAAGCTTTCC+AGG 0.281876 3_3:-66525522 Msa0466010:CDS
TTAAACACTTCTGTAATATA+AGG 0.282534 3_3:+66525567 None:intergenic
TCACCTATGTGTGTCACTTT+TGG 0.299038 3_3:-66524288 Msa0466010:CDS
TACTTGCTTCCCTTCTGTTA+TGG 0.306603 3_3:+66524413 None:intergenic
TATTGCTCAGCTAAGAGATT+TGG 0.321661 3_3:-66523836 Msa0466010:CDS
TAGGTGACTTGTGCTGAATT+TGG 0.335100 3_3:+66524304 None:intergenic
AAATCACAGAATCTACCTTT+TGG 0.342438 3_3:-66522731 Msa0466010:CDS
GGCCTAGCCTTGTTCATGTA+AGG 0.342464 3_3:+66522813 None:intergenic
ACAAGATATTCTGTTAAGTC+TGG 0.343741 3_3:+66525537 None:intergenic
TGGCTTTGTGGTGTCGGCTT+GGG 0.349699 3_3:-66522449 Msa0466010:three_prime_UTR
AACATGGGAGGAGGATTAGT+TGG 0.353457 3_3:-66525669 Msa0466010:CDS
CGTCCCAAGCATGAGGGATT+TGG 0.356445 3_3:-66523111 Msa0466010:CDS
GTGTTCTCCTCTCAAGATCT+TGG 0.357805 3_3:-66522419 Msa0466010:three_prime_UTR
GGGAAGCAAGTAGTGTTTAC+AGG 0.360053 3_3:-66524402 Msa0466010:CDS
ACGTTTGCTTGGAAATCCTT+TGG 0.368793 3_3:+66523017 None:intergenic
ATCCTACATTCATAAAGTTA+TGG 0.375298 3_3:-66522569 Msa0466010:CDS
TGAGTTAAGGAGTTGTTGTT+AGG 0.376501 3_3:+66524099 None:intergenic
AGCCTACGAAGCTGAATTAG+AGG 0.380213 3_3:-66523770 Msa0466010:CDS
TGAGTGTACCTATACCTCTT+TGG 0.384599 3_3:+66522792 None:intergenic
GTGAAGAGACTTGTGCTTGC+AGG 0.386249 3_3:-66522996 Msa0466010:CDS
CAAGTCTCTTCACGTTTGCT+TGG 0.387820 3_3:+66523006 None:intergenic
GACGATCTTCCTTTGTCTGC+TGG 0.394824 3_3:-66523706 Msa0466010:CDS
TGTTTACAGGGCACTCTTCA+GGG 0.398661 3_3:-66524389 Msa0466010:CDS
TTATAAGCTTTCCAGGATCA+TGG 0.399691 3_3:-66525515 Msa0466010:CDS
TGACCAGTCCAAGGCTATCC+AGG 0.399798 3_3:+66523653 None:intergenic
TGTTCTCCTCTCAAGATCTT+GGG 0.407220 3_3:-66522418 Msa0466010:three_prime_UTR
TCCTACATTCATAAAGTTAT+GGG 0.412183 3_3:-66522568 Msa0466010:CDS
GATCATGGGTTGAAACTGAT+TGG 0.413793 3_3:-66525500 Msa0466010:CDS
ATCTCAAAATCCAAAAGAAA+AGG 0.414022 3_3:+66522035 None:intergenic
CATGTTGCTTGTAATCTAAT+GGG 0.415589 3_3:-66524003 Msa0466010:CDS
GGGAAGCACAAATTTGTTGT+TGG 0.425534 3_3:-66523983 Msa0466010:CDS
TATTATTATTAGAATATAGT+TGG 0.427276 3_3:-66521997 Msa0466010:three_prime_UTR
TTGGCTTTGTGGTGTCGGCT+TGG 0.428368 3_3:-66522450 Msa0466010:three_prime_UTR
CGACTGTGCCTTCGAGCAGC+TGG 0.429748 3_3:-66523197 Msa0466010:CDS
GTCCATACAGGGATTTGCTC+TGG 0.430339 3_3:-66522361 Msa0466010:three_prime_UTR
TACCTGCAATTGTACTACTT+TGG 0.431517 3_3:-66522238 Msa0466010:three_prime_UTR
TTAAGTCCGTATAGACCCTT+TGG 0.433280 3_3:-66523937 Msa0466010:CDS
TGCCCAAAATGTTGCTAGAA+TGG 0.436813 3_3:+66524356 None:intergenic
TTAAATGAATAAATTCAATT+CGG 0.437847 3_3:-66521942 Msa0466010:three_prime_UTR
TAAGTCCCAAAGGGTCTATA+CGG 0.439330 3_3:+66523931 None:intergenic
TCTTATTGGATCTTGAGTTA+AGG 0.444425 3_3:+66524086 None:intergenic
AGCCAAAGTAGTACAATTGC+AGG 0.444514 3_3:+66522236 None:intergenic
CTGTTAAAGAATAAATCAAT+TGG 0.444789 3_3:-66522494 Msa0466010:exon
TTTCATTTGCTTAAAAGTGT+TGG 0.452737 3_3:-66525432 Msa0466010:CDS
AGGCTAGGCCAAAGAGGTAT+AGG 0.454952 3_3:-66522800 Msa0466010:CDS
TTCTTCCACCTCAGCCCAAA+AGG 0.454957 3_3:+66522716 None:intergenic
AGTAAAGAGAGTGGAGATGC+AGG 0.460370 3_3:+66522515 None:intergenic
TACCGACATTGCAGCCGCCC+TGG 0.465765 3_3:-66523671 Msa0466010:CDS
CTTTCCTTGATATCTTCAAA+AGG 0.465824 3_3:+66522666 None:intergenic
ACGAGTTGGCTTTGTGGTGT+CGG 0.469386 3_3:-66522455 Msa0466010:three_prime_UTR
CTTCCTTTGTCTGCTGGTGA+TGG 0.469626 3_3:-66523700 Msa0466010:CDS
TCAGTTTCAACCCATGATCC+TGG 0.469700 3_3:+66525504 None:intergenic
GGAGTCAAAAGCTGAAGAAC+AGG 0.476760 3_3:+66524120 None:intergenic
ATCCTTTGAGAACACATCCT+TGG 0.477252 3_3:+66522590 None:intergenic
CTTCCAAATCCCTCATGCTT+GGG 0.479202 3_3:+66523108 None:intergenic
TGATGCCTTCAAGGTGCAAA+AGG 0.480497 3_3:-66523042 Msa0466010:CDS
GATGGTTGGAGCATGCAAAC+AGG 0.482208 3_3:-66522767 Msa0466010:CDS
TCCCATAACTTTATGAATGT+AGG 0.484731 3_3:+66522567 None:intergenic
ATGACCACTTCAACACTCCT+TGG 0.487533 3_3:-66522277 Msa0466010:three_prime_UTR
CGAATCTGTTGAAGAAAGCT+TGG 0.491323 3_3:+66525385 None:intergenic
ACCCACACGAGTTGGCTTTG+TGG 0.491349 3_3:-66522461 Msa0466010:three_prime_UTR
CTTGAGAGGAGAACACTTCA+AGG 0.492532 3_3:+66522426 None:intergenic
ATCCAGGGCGGCTGCAATGT+CGG 0.493844 3_3:+66523669 None:intergenic
CAAGATATTCTGTTAAGTCT+GGG 0.499249 3_3:+66525538 None:intergenic
TCTTCCAAATCCCTCATGCT+TGG 0.500980 3_3:+66523107 None:intergenic
TGGTTTGTTAGAAAATCATT+TGG 0.503071 3_3:-66525480 Msa0466010:CDS
TGTGAGATAAACAATGGAAA+AGG 0.505004 3_3:-66523071 Msa0466010:CDS
AGCCAGAGCAAATCCCTGTA+TGG 0.506443 3_3:+66522359 None:intergenic
CGCCCTGGATAGCCTTGGAC+TGG 0.507505 3_3:-66523656 Msa0466010:intron
TCTCAAAATCCAAAAGAAAA+GGG 0.509972 3_3:+66522036 None:intergenic
AGGTGGAAGAACTTTGCAGC+TGG 0.514870 3_3:-66522704 Msa0466010:CDS
TATAAGCTTTCCAGGATCAT+GGG 0.514981 3_3:-66525514 Msa0466010:CDS
TAAAATGTGGACTGATAAAG+AGG 0.520001 3_3:-66522619 Msa0466010:CDS
ATTGACTTATATTTATGAGA+AGG 0.521179 3_3:+66522308 None:intergenic
AGGTTATTATGATGCCTTCA+AGG 0.524131 3_3:-66523051 Msa0466010:CDS
GCAGCCGCCCTGGATAGCCT+TGG 0.528324 3_3:-66523661 Msa0466010:CDS
CTAGAGGCTCAACAAGTTGA+CGG 0.528764 3_3:+66522880 None:intergenic
ACTTTCCTCATTTGTAGCTG+AGG 0.530674 3_3:-66525349 Msa0466010:intron
GCTGAATTAGAGGAGAGCTT+AGG 0.531773 3_3:-66523760 Msa0466010:CDS
TCACCGTCATTTGAAGAATG+AGG 0.532372 3_3:-66522844 Msa0466010:CDS
ATCTATAAACCCACACGAGT+TGG 0.534080 3_3:-66522469 Msa0466010:three_prime_UTR
TTCTTTAACAGTAAAGAGAG+TGG 0.542406 3_3:+66522506 None:intergenic
ATTCTTGAATTTAACGCACT+CGG 0.543530 3_3:+66522112 None:intergenic
GGATTAGTTGGAGACAACAT+AGG 0.544180 3_3:-66525657 Msa0466010:CDS
TAAGTCCGTATAGACCCTTT+GGG 0.545191 3_3:-66523936 Msa0466010:CDS
TGGCAATGATGAAACTGCTT+TGG 0.552119 3_3:-66525412 Msa0466010:CDS
CAGAAAATGTAAGTCCCAAA+GGG 0.552723 3_3:+66523922 None:intergenic
AACTGCCAGATGAGTTTGAA+GGG 0.559752 3_3:-66522935 Msa0466010:CDS
GTTATGGGAAACTCTACCTC+AGG 0.565285 3_3:-66522553 Msa0466010:CDS
GTTTACAGGGCACTCTTCAG+GGG 0.565557 3_3:-66524388 Msa0466010:CDS
CACCACAAAGCCAACTCGTG+TGG 0.566126 3_3:+66522459 None:intergenic
CCATTAGATTACAAGCAACA+TGG 0.567203 3_3:+66524004 None:intergenic
AGATCATTGAAATGCTGAAG+AGG 0.568367 3_3:-66522962 Msa0466010:CDS
GTGAAGAAAGCCATAACAGA+AGG 0.568972 3_3:-66524423 Msa0466010:CDS
AGAAGGTTCCCCACTAGCGA+GGG 0.569356 3_3:+66522325 None:intergenic
TAGGTACACTCAGAGATGGT+TGG 0.571876 3_3:-66522781 Msa0466010:CDS
AAATATAGAAACATGGGAGG+AGG 0.573513 3_3:-66525678 Msa0466010:exon
GCAGAAAATGTAAGTCCCAA+AGG 0.575631 3_3:+66523921 None:intergenic
TGTCCTCATTCTTCAAATGA+CGG 0.579585 3_3:+66522841 None:intergenic
ATTAATTACTGACCAGTCCA+AGG 0.584798 3_3:+66523644 None:intergenic
ACATACCTCAGCTACAAATG+AGG 0.585270 3_3:+66525344 None:intergenic
CACAGGACCTTACATGAACA+AGG 0.587269 3_3:-66522820 Msa0466010:CDS
CTCCTCTAATTCAGCTTCGT+AGG 0.590554 3_3:+66523768 None:intergenic
GACCAGTCCAAGGCTATCCA+GGG 0.591652 3_3:+66523654 None:intergenic
ACTTGTGCTTGCAGGAGTAT+GGG 0.592966 3_3:-66522988 Msa0466010:CDS
TTTGAACCCAAGATCTTGAG+AGG 0.593345 3_3:+66522412 None:intergenic
AACCAAGGATGTGTTCTCAA+AGG 0.596729 3_3:-66522592 Msa0466010:CDS
AGAAGGCCGTCCCAAGCATG+AGG 0.597386 3_3:-66523118 Msa0466010:CDS
CAAGGTGCAAAAGGATCCAA+AGG 0.597796 3_3:-66523033 Msa0466010:CDS
CTAACTCGCCAGCTGCTCGA+AGG 0.598382 3_3:+66523189 None:intergenic
AGGTTCCCCACTAGCGAGGG+GGG 0.600240 3_3:+66522328 None:intergenic
GAACCAAAAGTGACACACAT+AGG 0.602673 3_3:+66524285 None:intergenic
GAACTGCCAGATGAGTTTGA+AGG 0.604489 3_3:-66522936 Msa0466010:CDS
GAATATATGATTACCAACCA+AGG 0.604755 3_3:+66524260 None:intergenic
TTTCTGGGCTAGTCCATACA+GGG 0.606434 3_3:-66522372 Msa0466010:three_prime_UTR
GACCTTACATGAACAAGGCT+AGG 0.606472 3_3:-66522815 Msa0466010:CDS
CAATGAGATGACAGAACATG+TGG 0.606675 3_3:+66522199 None:intergenic
GATGTAGATTTATGTTCCTG+AGG 0.607470 3_3:+66522537 None:intergenic
GAGAAGGTTCCCCACTAGCG+AGG 0.607629 3_3:+66522324 None:intergenic
TGCAATATGACATTGTGCCT+AGG 0.608045 3_3:-66524185 Msa0466010:CDS
ACAAACCAAATATAGAAACA+TGG 0.611053 3_3:-66525685 Msa0466010:exon
TTGAACTGCTGTGACTATTG+TGG 0.611508 3_3:+66521913 None:intergenic
CAAACCAAATATAGAAACAT+GGG 0.614166 3_3:-66525684 Msa0466010:exon
TCAACATGTGAGATAAACAA+TGG 0.616431 3_3:-66523077 Msa0466010:CDS
TGGTAATGGCCAGCTGATTG+TGG 0.617049 3_3:-66523896 Msa0466010:CDS
CAAATCCCTCATGCTTGGGA+CGG 0.617619 3_3:+66523112 None:intergenic
TGAAGAAAGCCATAACAGAA+GGG 0.618618 3_3:-66524422 Msa0466010:CDS
GGAAGCAAGTAGTGTTTACA+GGG 0.623668 3_3:-66524401 Msa0466010:CDS
AATATATGATTACCAACCAA+GGG 0.624396 3_3:+66524261 None:intergenic
ACCACAAAGCCAACTCGTGT+GGG 0.632523 3_3:+66522460 None:intergenic
AAGGTTCCCCACTAGCGAGG+GGG 0.632642 3_3:+66522327 None:intergenic
GGTATAGGTACACTCAGAGA+TGG 0.637909 3_3:-66522785 Msa0466010:CDS
TTGAGCAAGATATTAAAATG+TGG 0.638522 3_3:-66522632 Msa0466010:CDS
TGATAATTGGCAATATCTAG+AGG 0.642810 3_3:+66522864 None:intergenic
TGAACAAGGCTAGGCCAAAG+AGG 0.645683 3_3:-66522806 Msa0466010:CDS
AAGATATTCTGTTAAGTCTG+GGG 0.645763 3_3:+66525539 None:intergenic
TGACCATCACCAGCAGACAA+AGG 0.649953 3_3:+66523697 None:intergenic
GAAGGCCGTCCCAAGCATGA+GGG 0.652947 3_3:-66523117 Msa0466010:CDS
TGATAAAGAGGTACTAACCA+AGG 0.655185 3_3:-66522607 Msa0466010:CDS
GAAGGTTCCCCACTAGCGAG+GGG 0.657462 3_3:+66522326 None:intergenic
ACCAAATATAGAAACATGGG+AGG 0.661129 3_3:-66525681 Msa0466010:exon
CAACATAGGATTAAACGAAG+AGG 0.662983 3_3:-66525643 Msa0466010:CDS
GTATTCTTCATTCTTCAACA+AGG 0.664683 3_3:-66522167 Msa0466010:three_prime_UTR
GAGCTTAGGAATGCAAAATG+TGG 0.681078 3_3:-66523746 Msa0466010:CDS
CAGTCCAAGGCTATCCAGGG+CGG 0.692022 3_3:+66523657 None:intergenic
TGCTGCATTCCTCATCACAG+TGG 0.699489 3_3:+66524038 None:intergenic
CATTTGAAGAATGAGGACAC+AGG 0.760387 3_3:-66522837 Msa0466010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAGTTTAGTTAAATTTT+TGG - chr3_3:66523107-66523126 Msa0466010:CDS 10.0%
!! TATTATTATTAGAATATAGT+TGG - chr3_3:66525645-66525664 Msa0466010:CDS 10.0%
!! TTAAATGAATAAATTCAATT+CGG - chr3_3:66525700-66525719 Msa0466010:five_prime_UTR 10.0%
!!! TTATTTTCTCTCTTTTTATT+TGG - chr3_3:66522360-66522379 Msa0466010:three_prime_UTR 15.0%
!!! TTTTTCAATTAAGATAACAT+TGG - chr3_3:66522588-66522607 Msa0466010:CDS 15.0%
!! AAATGAAGAGAAAATAAAAA+AGG - chr3_3:66524492-66524511 Msa0466010:intron 15.0%
!! TTAAACACTTCTGTAATATA+AGG + chr3_3:66522078-66522097 None:intergenic 20.0%
!! AATAATAATGAAAGATTGTG+TGG + chr3_3:66522341-66522360 None:intergenic 20.0%
!! TTTATAGCTTATAAGTTCAT+AGG - chr3_3:66522426-66522445 Msa0466010:three_prime_UTR 20.0%
!! ATAAAAAATGGTTATGGATT+TGG + chr3_3:66522798-66522817 None:intergenic 20.0%
!! TAGCTTATAAAAAATGGTTA+TGG + chr3_3:66522804-66522823 None:intergenic 20.0%
!! TTGAAGTAGCTTATAAAAAA+TGG + chr3_3:66522810-66522829 None:intergenic 20.0%
!! ATTGTTTCAATTAAGATAAC+TGG + chr3_3:66522870-66522889 None:intergenic 20.0%
!!! ATTTCACAAATTATCTGTTT+TGG - chr3_3:66523066-66523085 Msa0466010:CDS 20.0%
!! TATAAGATCTATCATATTGA+TGG + chr3_3:66524299-66524318 None:intergenic 20.0%
!! CTGTTAAAGAATAAATCAAT+TGG - chr3_3:66525148-66525167 Msa0466010:intron 20.0%
!!! ATTGACTTATATTTATGAGA+AGG + chr3_3:66525337-66525356 None:intergenic 20.0%
!!! ACAAAAGTTTTTATTTTCCA+AGG + chr3_3:66525385-66525404 None:intergenic 20.0%
! ACAAACCAAATATAGAAACA+TGG - chr3_3:66521957-66521976 Msa0466010:three_prime_UTR 25.0%
! CAAACCAAATATAGAAACAT+GGG - chr3_3:66521958-66521977 Msa0466010:three_prime_UTR 25.0%
!!! TGGTTTGTTAGAAAATCATT+TGG - chr3_3:66522162-66522181 Msa0466010:three_prime_UTR 25.0%
!! TTTCATTTGCTTAAAAGTGT+TGG - chr3_3:66522210-66522229 Msa0466010:three_prime_UTR 25.0%
!!! TCTCTCTTTTTATTTGGAAT+TGG - chr3_3:66522366-66522385 Msa0466010:three_prime_UTR 25.0%
!! GTTGTTAAACATGTCTATTT+TGG + chr3_3:66522453-66522472 None:intergenic 25.0%
! TATACTTGATGAACTTATAG+CGG - chr3_3:66522477-66522496 Msa0466010:three_prime_UTR 25.0%
! ATTTGTAGTGATTGGTAAAT+AGG - chr3_3:66522537-66522556 Msa0466010:CDS 25.0%
! ATATAAGCTACTTGAATTAG+CGG - chr3_3:66522615-66522634 Msa0466010:CDS 25.0%
! ATGACTAAAAAGGATATATC+TGG + chr3_3:66522724-66522743 None:intergenic 25.0%
! ATATGCTCATATGACTAAAA+AGG + chr3_3:66522734-66522753 None:intergenic 25.0%
! TTAATGTGACAAACAACATT+AGG + chr3_3:66523031-66523050 None:intergenic 25.0%
! TTGTGAAATTACTCAAATCA+TGG + chr3_3:66523055-66523074 None:intergenic 25.0%
! AATATATGATTACCAACCAA+GGG + chr3_3:66523384-66523403 None:intergenic 25.0%
!!! TCAACCATTATTTTAAACCT+TGG - chr3_3:66524172-66524191 Msa0466010:CDS 25.0%
!! CTAACCAAGGTTTAAAATAA+TGG + chr3_3:66524179-66524198 None:intergenic 25.0%
! GAAAATAAAAAAGGAGTTTC+AGG - chr3_3:66524501-66524520 Msa0466010:intron 25.0%
!!! AAAAAAGAATGGATTGAACT+CGG - chr3_3:66524730-66524749 Msa0466010:intron 25.0%
!!! TAAACCTTTTGAAGATATCA+AGG - chr3_3:66524972-66524991 Msa0466010:intron 25.0%
!!! TTTTGAAGATATCAAGGAAA+GGG - chr3_3:66524978-66524997 Msa0466010:intron 25.0%
! TTGAGCAAGATATTAAAATG+TGG - chr3_3:66525010-66525029 Msa0466010:intron 25.0%
! ATCCTACATTCATAAAGTTA+TGG - chr3_3:66525073-66525092 Msa0466010:intron 25.0%
! TCCTACATTCATAAAGTTAT+GGG - chr3_3:66525074-66525093 Msa0466010:intron 25.0%
!! ATTTGTACTTTTAGATGCTT+AGG - chr3_3:66525559-66525578 Msa0466010:CDS 25.0%
!! TTTGTACTTTTAGATGCTTA+GGG - chr3_3:66525560-66525579 Msa0466010:CDS 25.0%
! TCTCAAAATCCAAAAGAAAA+GGG + chr3_3:66525609-66525628 None:intergenic 25.0%
! ATCTCAAAATCCAAAAGAAA+AGG + chr3_3:66525610-66525629 None:intergenic 25.0%
AAGATATTCTGTTAAGTCTG+GGG + chr3_3:66522106-66522125 None:intergenic 30.0%
CAAGATATTCTGTTAAGTCT+GGG + chr3_3:66522107-66522126 None:intergenic 30.0%
ACAAGATATTCTGTTAAGTC+TGG + chr3_3:66522108-66522127 None:intergenic 30.0%
! TATCTTGTTATAAGCTTTCC+AGG - chr3_3:66522120-66522139 Msa0466010:three_prime_UTR 30.0%
CTGATTGAATTTGTAGTGAT+TGG - chr3_3:66522529-66522548 Msa0466010:CDS 30.0%
TTGGTGAAAACATAACAGAT+AGG + chr3_3:66523003-66523022 None:intergenic 30.0%
CAAACAACATTAGGACTATT+TGG + chr3_3:66523022-66523041 None:intergenic 30.0%
GAATATATGATTACCAACCA+AGG + chr3_3:66523385-66523404 None:intergenic 30.0%
ATGCTTCAAACAGAGAAAAA+TGG - chr3_3:66523409-66523428 Msa0466010:intron 30.0%
TCTTCCATTGAAAAGCTTAT+TGG - chr3_3:66523498-66523517 Msa0466010:intron 30.0%
TCTTATTGGATCTTGAGTTA+AGG + chr3_3:66523559-66523578 None:intergenic 30.0%
! CATGTTGCTTGTAATCTAAT+GGG - chr3_3:66523639-66523658 Msa0466010:intron 30.0%
! TACATTTTCTGCAATGGTAA+TGG - chr3_3:66523732-66523751 Msa0466010:CDS 30.0%
TCAACATGTGAGATAAACAA+TGG - chr3_3:66524565-66524584 Msa0466010:intron 30.0%
TGTGAGATAAACAATGGAAA+AGG - chr3_3:66524571-66524590 Msa0466010:intron 30.0%
AGTTTGAAGGGAAAAAAGAA+TGG - chr3_3:66524719-66524738 Msa0466010:intron 30.0%
TGATAATTGGCAATATCTAG+AGG + chr3_3:66524781-66524800 None:intergenic 30.0%
! AAATCACAGAATCTACCTTT+TGG - chr3_3:66524911-66524930 Msa0466010:intron 30.0%
! AATCACAGAATCTACCTTTT+GGG - chr3_3:66524912-66524931 Msa0466010:intron 30.0%
CTTTCCTTGATATCTTCAAA+AGG + chr3_3:66524979-66524998 None:intergenic 30.0%
!! CTTTTGAAGATATCAAGGAA+AGG - chr3_3:66524977-66524996 Msa0466010:intron 30.0%
! TAAAATGTGGACTGATAAAG+AGG - chr3_3:66525023-66525042 Msa0466010:intron 30.0%
TCCCATAACTTTATGAATGT+AGG + chr3_3:66525078-66525097 None:intergenic 30.0%
TTCTTTAACAGTAAAGAGAG+TGG + chr3_3:66525139-66525158 None:intergenic 30.0%
!!! CTCCTAATGTCATTTTTTCT+GGG - chr3_3:66525255-66525274 Msa0466010:intron 30.0%
! TTCTGTCATCTCATTGTTTT+AGG - chr3_3:66525450-66525469 Msa0466010:CDS 30.0%
GTATTCTTCATTCTTCAACA+AGG - chr3_3:66525475-66525494 Msa0466010:CDS 30.0%
ATTCTTGAATTTAACGCACT+CGG + chr3_3:66525533-66525552 None:intergenic 30.0%
! TTGTACTTTTAGATGCTTAG+GGG - chr3_3:66525561-66525580 Msa0466010:CDS 30.0%
ACCAAATATAGAAACATGGG+AGG - chr3_3:66521961-66521980 Msa0466010:three_prime_UTR 35.0%
! TCCTCCCATGTTTCTATATT+TGG + chr3_3:66521965-66521984 None:intergenic 35.0%
AAATATAGAAACATGGGAGG+AGG - chr3_3:66521964-66521983 Msa0466010:three_prime_UTR 35.0%
CAACATAGGATTAAACGAAG+AGG - chr3_3:66521999-66522018 Msa0466010:three_prime_UTR 35.0%
TTATAAGCTTTCCAGGATCA+TGG - chr3_3:66522127-66522146 Msa0466010:three_prime_UTR 35.0%
TATAAGCTTTCCAGGATCAT+GGG - chr3_3:66522128-66522147 Msa0466010:three_prime_UTR 35.0%
TAATGAAAGATTGTGTGGCA+GGG + chr3_3:66522336-66522355 None:intergenic 35.0%
ATAATGAAAGATTGTGTGGC+AGG + chr3_3:66522337-66522356 None:intergenic 35.0%
TATTAGCGCAAAATTTGTCG+TGG + chr3_3:66522398-66522417 None:intergenic 35.0%
AGATATTCGTGAGAAAGTGA+CGG - chr3_3:66522695-66522714 Msa0466010:CDS 35.0%
CGATAAGCTAGCTGATTATT+TGG + chr3_3:66522980-66522999 None:intergenic 35.0%
TGCAATGCAACACATTTGAT+TGG + chr3_3:66523198-66523217 None:intergenic 35.0%
AATCAAATGTGTTGCATTGC+AGG - chr3_3:66523197-66523216 Msa0466010:CDS 35.0%
TGAAGAAAGCCATAACAGAA+GGG - chr3_3:66523220-66523239 Msa0466010:intron 35.0%
!!! GCTGAATTTGGATTTTGGTT+GGG + chr3_3:66523329-66523348 None:intergenic 35.0%
!! TGCTGAATTTGGATTTTGGT+TGG + chr3_3:66523330-66523349 None:intergenic 35.0%
! CTTGTGCTGAATTTGGATTT+TGG + chr3_3:66523334-66523353 None:intergenic 35.0%
AAAGGAGCAAGAAAAATCCT+AGG + chr3_3:66523477-66523496 None:intergenic 35.0%
! AGCTTTTCAATGGAAGAGAA+AGG + chr3_3:66523495-66523514 None:intergenic 35.0%
! AGGACCAATAAGCTTTTCAA+TGG + chr3_3:66523505-66523524 None:intergenic 35.0%
! TGAGTTAAGGAGTTGTTGTT+AGG + chr3_3:66523546-66523565 None:intergenic 35.0%
CCATTAGATTACAAGCAACA+TGG + chr3_3:66523641-66523660 None:intergenic 35.0%
! CCATGTTGCTTGTAATCTAA+TGG - chr3_3:66523638-66523657 Msa0466010:intron 35.0%
CAGAAAATGTAAGTCCCAAA+GGG + chr3_3:66523723-66523742 None:intergenic 35.0%
!!! AGTTTTTTACCACAATCAGC+TGG + chr3_3:66523758-66523777 None:intergenic 35.0%
TATTGCTCAGCTAAGAGATT+TGG - chr3_3:66523806-66523825 Msa0466010:CDS 35.0%
ATTAATTACTGACCAGTCCA+AGG + chr3_3:66524001-66524020 None:intergenic 35.0%
ACAATAACATGCTCTAACCA+AGG + chr3_3:66524192-66524211 None:intergenic 35.0%
ACCATCCATTTACGATTGTA+TGG - chr3_3:66524229-66524248 Msa0466010:CDS 35.0%
ACCATACAATCGTAAATGGA+TGG + chr3_3:66524233-66524252 None:intergenic 35.0%
CTTGACCATACAATCGTAAA+TGG + chr3_3:66524237-66524256 None:intergenic 35.0%
AAAAAAGGAGTTTCAGGAGA+AGG - chr3_3:66524507-66524526 Msa0466010:intron 35.0%
AGGTTATTATGATGCCTTCA+AGG - chr3_3:66524591-66524610 Msa0466010:intron 35.0%
AGATCATTGAAATGCTGAAG+AGG - chr3_3:66524680-66524699 Msa0466010:intron 35.0%
! TTTTTCCCTTCAAACTCATC+TGG + chr3_3:66524715-66524734 None:intergenic 35.0%
CTTCAAATGACGGTGATAAT+TGG + chr3_3:66524794-66524813 None:intergenic 35.0%
TGTCCTCATTCTTCAAATGA+CGG + chr3_3:66524804-66524823 None:intergenic 35.0%
! GATTCTGTGATTTCTGCTTT+TGG + chr3_3:66524904-66524923 None:intergenic 35.0%
!! TGATAAAGAGGTACTAACCA+AGG - chr3_3:66525035-66525054 Msa0466010:intron 35.0%
GATGTAGATTTATGTTCCTG+AGG + chr3_3:66525108-66525127 None:intergenic 35.0%
CCAGAAAAAATGACATTAGG+AGG + chr3_3:66525257-66525276 None:intergenic 35.0%
!!! CCTCCTAATGTCATTTTTTC+TGG - chr3_3:66525254-66525273 Msa0466010:intron 35.0%
AGCCCAGAAAAAATGACATT+AGG + chr3_3:66525260-66525279 None:intergenic 35.0%
TACCTGCAATTGTACTACTT+TGG - chr3_3:66525404-66525423 Msa0466010:CDS 35.0%
! GATCATTAGCCCTTTTCTTT+TGG - chr3_3:66525597-66525616 Msa0466010:CDS 35.0%
!! GGATTAGTTGGAGACAACAT+AGG - chr3_3:66521985-66522004 Msa0466010:three_prime_UTR 40.0%
! GATCATGGGTTGAAACTGAT+TGG - chr3_3:66522142-66522161 Msa0466010:three_prime_UTR 40.0%
TGGCAATGATGAAACTGCTT+TGG - chr3_3:66522230-66522249 Msa0466010:three_prime_UTR 40.0%
CGAATCTGTTGAAGAAAGCT+TGG + chr3_3:66522260-66522279 None:intergenic 40.0%
ACTTTCCTCATTTGTAGCTG+AGG - chr3_3:66522293-66522312 Msa0466010:three_prime_UTR 40.0%
ACATACCTCAGCTACAAATG+AGG + chr3_3:66522301-66522320 None:intergenic 40.0%
GTGAAGAAAGCCATAACAGA+AGG - chr3_3:66523219-66523238 Msa0466010:intron 40.0%
TACTTGCTTCCCTTCTGTTA+TGG + chr3_3:66523232-66523251 None:intergenic 40.0%
GGAAGCAAGTAGTGTTTACA+GGG - chr3_3:66523241-66523260 Msa0466010:intron 40.0%
! TGGCCATTCTAGCAACATTT+TGG - chr3_3:66523283-66523302 Msa0466010:intron 40.0%
! GGCCATTCTAGCAACATTTT+GGG - chr3_3:66523284-66523303 Msa0466010:intron 40.0%
TGCCCAAAATGTTGCTAGAA+TGG + chr3_3:66523289-66523308 None:intergenic 40.0%
! TCTAGCAACATTTTGGGCAT+TGG - chr3_3:66523290-66523309 Msa0466010:intron 40.0%
! TAGGTGACTTGTGCTGAATT+TGG + chr3_3:66523341-66523360 None:intergenic 40.0%
!!! TCACCTATGTGTGTCACTTT+TGG - chr3_3:66523354-66523373 Msa0466010:intron 40.0%
GAACCAAAAGTGACACACAT+AGG + chr3_3:66523360-66523379 None:intergenic 40.0%
TGCAATATGACATTGTGCCT+AGG - chr3_3:66523457-66523476 Msa0466010:intron 40.0%
CAAGTCACACTGTCTCTTAT+TGG + chr3_3:66523573-66523592 None:intergenic 40.0%
! AGTTTTACTCCACTGTGATG+AGG - chr3_3:66523595-66523614 Msa0466010:intron 40.0%
!! GGGAAGCACAAATTTGTTGT+TGG - chr3_3:66523659-66523678 Msa0466010:CDS 40.0%
TTAAGTCCGTATAGACCCTT+TGG - chr3_3:66523705-66523724 Msa0466010:CDS 40.0%
TAAGTCCGTATAGACCCTTT+GGG - chr3_3:66523706-66523725 Msa0466010:CDS 40.0%
TAAGTCCCAAAGGGTCTATA+CGG + chr3_3:66523714-66523733 None:intergenic 40.0%
GCAGAAAATGTAAGTCCCAA+AGG + chr3_3:66523724-66523743 None:intergenic 40.0%
! GGGACTTACATTTTCTGCAA+TGG - chr3_3:66523726-66523745 Msa0466010:CDS 40.0%
! ATGCTGCAGTATGCTTTTGT+TGG + chr3_3:66523850-66523869 None:intergenic 40.0%
GAGCTTAGGAATGCAAAATG+TGG - chr3_3:66523896-66523915 Msa0466010:CDS 40.0%
GTTAGAGCGAAGGTTTCAAA+AGG - chr3_3:66524061-66524080 Msa0466010:CDS 40.0%
! GGTTTCAAAAGGTGTGATTG+TGG - chr3_3:66524072-66524091 Msa0466010:CDS 40.0%
ACGTTTGCTTGGAAATCCTT+TGG + chr3_3:66524628-66524647 None:intergenic 40.0%
AACTGCCAGATGAGTTTGAA+GGG - chr3_3:66524707-66524726 Msa0466010:intron 40.0%
TCACCGTCATTTGAAGAATG+AGG - chr3_3:66524798-66524817 Msa0466010:intron 40.0%
CATTTGAAGAATGAGGACAC+AGG - chr3_3:66524805-66524824 Msa0466010:intron 40.0%
TGAGTGTACCTATACCTCTT+TGG + chr3_3:66524853-66524872 None:intergenic 40.0%
AACCAAGGATGTGTTCTCAA+AGG - chr3_3:66525050-66525069 Msa0466010:intron 40.0%
! ATCCTTTGAGAACACATCCT+TGG + chr3_3:66525055-66525074 None:intergenic 40.0%
ATCTATAAACCCACACGAGT+TGG - chr3_3:66525173-66525192 Msa0466010:intron 40.0%
TGTTCTCCTCTCAAGATCTT+GGG - chr3_3:66525224-66525243 Msa0466010:intron 40.0%
TTTGAACCCAAGATCTTGAG+AGG + chr3_3:66525233-66525252 None:intergenic 40.0%
!! GGATTTGCTCTGGCTTTAAA+TGG - chr3_3:66525291-66525310 Msa0466010:intron 40.0%
!!! TTTTCCAAGGAGTGTTGAAG+TGG + chr3_3:66525372-66525391 None:intergenic 40.0%
AGCCAAAGTAGTACAATTGC+AGG + chr3_3:66525409-66525428 None:intergenic 40.0%
CAATGAGATGACAGAACATG+TGG + chr3_3:66525446-66525465 None:intergenic 40.0%
! AACATGGGAGGAGGATTAGT+TGG - chr3_3:66521973-66521992 Msa0466010:three_prime_UTR 45.0%
TCAGTTTCAACCCATGATCC+TGG + chr3_3:66522141-66522160 None:intergenic 45.0%
GGGAAGCAAGTAGTGTTTAC+AGG - chr3_3:66523240-66523259 Msa0466010:intron 45.0%
! TGTTTACAGGGCACTCTTCA+GGG - chr3_3:66523253-66523272 Msa0466010:intron 45.0%
!!! TGTCACTTTTGGTTCTCCCT+TGG - chr3_3:66523365-66523384 Msa0466010:intron 45.0%
!!! ACTTTTGGTTCTCCCTTGGT+TGG - chr3_3:66523369-66523388 Msa0466010:intron 45.0%
GGAGTCAAAAGCTGAAGAAC+AGG + chr3_3:66523525-66523544 None:intergenic 45.0%
AGCCTACGAAGCTGAATTAG+AGG - chr3_3:66523872-66523891 Msa0466010:CDS 45.0%
CTCCTCTAATTCAGCTTCGT+AGG + chr3_3:66523877-66523896 None:intergenic 45.0%
GCTGAATTAGAGGAGAGCTT+AGG - chr3_3:66523882-66523901 Msa0466010:CDS 45.0%
AGCGTATTGAGTTAGAGCGA+AGG - chr3_3:66524051-66524070 Msa0466010:CDS 45.0%
CTTCCAAATCCCTCATGCTT+GGG + chr3_3:66524537-66524556 None:intergenic 45.0%
TCTTCCAAATCCCTCATGCT+TGG + chr3_3:66524538-66524557 None:intergenic 45.0%
TGATGCCTTCAAGGTGCAAA+AGG - chr3_3:66524600-66524619 Msa0466010:intron 45.0%
! TGGATCCTTTTGCACCTTGA+AGG + chr3_3:66524608-66524627 None:intergenic 45.0%
CAAGGTGCAAAAGGATCCAA+AGG - chr3_3:66524609-66524628 Msa0466010:intron 45.0%
CAAGTCTCTTCACGTTTGCT+TGG + chr3_3:66524639-66524658 None:intergenic 45.0%
! ACTTGTGCTTGCAGGAGTAT+GGG - chr3_3:66524654-66524673 Msa0466010:intron 45.0%
GAACTGCCAGATGAGTTTGA+AGG - chr3_3:66524706-66524725 Msa0466010:intron 45.0%
! CTAGAGGCTCAACAAGTTGA+CGG + chr3_3:66524765-66524784 None:intergenic 45.0%
CACAGGACCTTACATGAACA+AGG - chr3_3:66524822-66524841 Msa0466010:intron 45.0%
GACCTTACATGAACAAGGCT+AGG - chr3_3:66524827-66524846 Msa0466010:intron 45.0%
GGTATAGGTACACTCAGAGA+TGG - chr3_3:66524857-66524876 Msa0466010:intron 45.0%
TAGGTACACTCAGAGATGGT+TGG - chr3_3:66524861-66524880 Msa0466010:intron 45.0%
! AGAATCTACCTTTTGGGCTG+AGG - chr3_3:66524918-66524937 Msa0466010:intron 45.0%
GTTATGGGAAACTCTACCTC+AGG - chr3_3:66525089-66525108 Msa0466010:intron 45.0%
AGTAAAGAGAGTGGAGATGC+AGG + chr3_3:66525130-66525149 None:intergenic 45.0%
CTTGAGAGGAGAACACTTCA+AGG + chr3_3:66525219-66525238 None:intergenic 45.0%
GTGTTCTCCTCTCAAGATCT+TGG - chr3_3:66525223-66525242 Msa0466010:intron 45.0%
!!! TTTTCTGGGCTAGTCCATAC+AGG - chr3_3:66525269-66525288 Msa0466010:intron 45.0%
!! TTTCTGGGCTAGTCCATACA+GGG - chr3_3:66525270-66525289 Msa0466010:intron 45.0%
ATGACCACTTCAACACTCCT+TGG - chr3_3:66525365-66525384 Msa0466010:CDS 45.0%
!! AAAATAATTATTATAGATAA+AGG - chr3_3:66523142-66523161 Msa0466010:CDS 5.0%
! GTGTTTACAGGGCACTCTTC+AGG - chr3_3:66523252-66523271 Msa0466010:intron 50.0%
! GTTTACAGGGCACTCTTCAG+GGG - chr3_3:66523254-66523273 Msa0466010:intron 50.0%
TGCTGCATTCCTCATCACAG+TGG + chr3_3:66523607-66523626 None:intergenic 50.0%
!! TGGTAATGGCCAGCTGATTG+TGG - chr3_3:66523746-66523765 Msa0466010:CDS 50.0%
GACGATCTTCCTTTGTCTGC+TGG - chr3_3:66523936-66523955 Msa0466010:CDS 50.0%
CTTCCTTTGTCTGCTGGTGA+TGG - chr3_3:66523942-66523961 Msa0466010:CDS 50.0%
TGACCATCACCAGCAGACAA+AGG + chr3_3:66523948-66523967 None:intergenic 50.0%
CTACACTGCGACTGCAATTG+TGG - chr3_3:66524130-66524149 Msa0466010:CDS 50.0%
GTGAGAGCAGAAGATGCAAG+AGG + chr3_3:66524267-66524286 None:intergenic 50.0%
CAAATCCCTCATGCTTGGGA+CGG + chr3_3:66524533-66524552 None:intergenic 50.0%
GTGAAGAGACTTGTGCTTGC+AGG - chr3_3:66524646-66524665 Msa0466010:intron 50.0%
GACTTGTGCTTGCAGGAGTA+TGG - chr3_3:66524653-66524672 Msa0466010:intron 50.0%
!! GGCCTAGCCTTGTTCATGTA+AGG + chr3_3:66524832-66524851 None:intergenic 50.0%
TGAACAAGGCTAGGCCAAAG+AGG - chr3_3:66524836-66524855 Msa0466010:intron 50.0%
! AGGCTAGGCCAAAGAGGTAT+AGG - chr3_3:66524842-66524861 Msa0466010:intron 50.0%
GATGGTTGGAGCATGCAAAC+AGG - chr3_3:66524875-66524894 Msa0466010:intron 50.0%
! ATCTACCTTTTGGGCTGAGG+TGG - chr3_3:66524921-66524940 Msa0466010:intron 50.0%
TTCTTCCACCTCAGCCCAAA+AGG + chr3_3:66524929-66524948 None:intergenic 50.0%
AGGTGGAAGAACTTTGCAGC+TGG - chr3_3:66524938-66524957 Msa0466010:intron 50.0%
ACCACAAAGCCAACTCGTGT+GGG + chr3_3:66525185-66525204 None:intergenic 50.0%
!! ACGAGTTGGCTTTGTGGTGT+CGG - chr3_3:66525187-66525206 Msa0466010:intron 50.0%
! GTCCATACAGGGATTTGCTC+TGG - chr3_3:66525281-66525300 Msa0466010:intron 50.0%
AGCCAGAGCAAATCCCTGTA+TGG + chr3_3:66525286-66525305 None:intergenic 50.0%
! GCACTCTTCAGGGGCTGTTT+TGG - chr3_3:66523263-66523282 Msa0466010:intron 55.0%
GACCAGTCCAAGGCTATCCA+GGG + chr3_3:66523991-66524010 None:intergenic 55.0%
TGACCAGTCCAAGGCTATCC+AGG + chr3_3:66523992-66524011 None:intergenic 55.0%
CGTCCCAAGCATGAGGGATT+TGG - chr3_3:66524531-66524550 Msa0466010:intron 55.0%
!! ACCCACACGAGTTGGCTTTG+TGG - chr3_3:66525181-66525200 Msa0466010:intron 55.0%
CACCACAAAGCCAACTCGTG+TGG + chr3_3:66525186-66525205 None:intergenic 55.0%
!! TTGGCTTTGTGGTGTCGGCT+TGG - chr3_3:66525192-66525211 Msa0466010:intron 55.0%
!! TGGCTTTGTGGTGTCGGCTT+GGG - chr3_3:66525193-66525212 Msa0466010:intron 55.0%
AGAAGGTTCCCCACTAGCGA+GGG + chr3_3:66525320-66525339 None:intergenic 55.0%
ATCCAGGGCGGCTGCAATGT+CGG + chr3_3:66523976-66523995 None:intergenic 60.0%
CAGTCCAAGGCTATCCAGGG+CGG + chr3_3:66523988-66524007 None:intergenic 60.0%
CTAACTCGCCAGCTGCTCGA+AGG + chr3_3:66524456-66524475 None:intergenic 60.0%
AGAAGGCCGTCCCAAGCATG+AGG - chr3_3:66524524-66524543 Msa0466010:intron 60.0%
GAAGGCCGTCCCAAGCATGA+GGG - chr3_3:66524525-66524544 Msa0466010:intron 60.0%
TAAATGGCCCCCCTCGCTAG+TGG - chr3_3:66525307-66525326 Msa0466010:intron 60.0%
AAATGGCCCCCCTCGCTAGT+GGG - chr3_3:66525308-66525327 Msa0466010:intron 60.0%
AAGGTTCCCCACTAGCGAGG+GGG + chr3_3:66525318-66525337 None:intergenic 60.0%
GAAGGTTCCCCACTAGCGAG+GGG + chr3_3:66525319-66525338 None:intergenic 60.0%
GAGAAGGTTCCCCACTAGCG+AGG + chr3_3:66525321-66525340 None:intergenic 60.0%
TACCGACATTGCAGCCGCCC+TGG - chr3_3:66523971-66523990 Msa0466010:CDS 65.0%
! CGCCCTGGATAGCCTTGGAC+TGG - chr3_3:66523986-66524005 Msa0466010:CDS 65.0%
CGACTGTGCCTTCGAGCAGC+TGG - chr3_3:66524445-66524464 Msa0466010:intron 65.0%
AATGGCCCCCCTCGCTAGTG+GGG - chr3_3:66525309-66525328 Msa0466010:intron 65.0%
AGGTTCCCCACTAGCGAGGG+GGG + chr3_3:66525317-66525336 None:intergenic 65.0%
GCAGCCGCCCTGGATAGCCT+TGG - chr3_3:66523981-66524000 Msa0466010:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66521928 66525736 66521928 ID=Msa0466010;Name=Msa0466010
chr3_3 mRNA 66521928 66525736 66521928 ID=Msa0466010-mRNA-1;Parent=Msa0466010;Name=Msa0466010-mRNA-1;_AED=0.00;_eAED=0.00;_QI=48|1|1|1|1|1|3|575|618
chr3_3 exon 66521928 66523231 66521928 ID=Msa0466010-mRNA-1:exon:15116;Parent=Msa0466010-mRNA-1
chr3_3 exon 66523657 66524445 66523657 ID=Msa0466010-mRNA-1:exon:15115;Parent=Msa0466010-mRNA-1
chr3_3 exon 66525350 66525736 66525350 ID=Msa0466010-mRNA-1:exon:15114;Parent=Msa0466010-mRNA-1
chr3_3 five_prime_UTR 66525689 66525736 66525689 ID=Msa0466010-mRNA-1:five_prime_utr;Parent=Msa0466010-mRNA-1
chr3_3 CDS 66525350 66525688 66525350 ID=Msa0466010-mRNA-1:cds;Parent=Msa0466010-mRNA-1
chr3_3 CDS 66523657 66524445 66523657 ID=Msa0466010-mRNA-1:cds;Parent=Msa0466010-mRNA-1
chr3_3 CDS 66522503 66523231 66522503 ID=Msa0466010-mRNA-1:cds;Parent=Msa0466010-mRNA-1
chr3_3 three_prime_UTR 66521928 66522502 66521928 ID=Msa0466010-mRNA-1:three_prime_utr;Parent=Msa0466010-mRNA-1
Gene Sequence

>Msa0466010

ATGGGAGGAGGATTAGTTGGAGACAACATAGGATTAAACGAAGAGGTTATCAAAAAAACATGTAGTTTGTCTTTCAAAGCTCACAACTCAGCAAATGAACCTTATATTACAGAAGTGTTTAAGACATCCCCAGACTTAACAGAATATCTTGTTATAAGCTTTCCAGGATCATGGGTTGAAACTGATTGGTTTGTTAGAAAATCATTTGGTGAAACTAAGATTGATCTTGCTAAGTTTCATTTGCTTAAAAGTGTTGGCAATGATGAAACTGCTTTGGTCAACCAAGCTTTCTTCAACAGATTCGATCGTTTGTTGAAACTTTCCTCATTTGTAGCTGAGGTGAAGAAAGCCATAACAGAAGGGAAGCAAGTAGTGTTTACAGGGCACTCTTCAGGGGCTGTTTTGGCCATTCTAGCAACATTTTGGGCATTGGAAGAGTATCTTTACCCAACCAAAATCCAAATTCAGCACAAGTCACCTATGTGTGTCACTTTTGGTTCTCCCTTGGTTGGTAATCATATATTCTCTCATGCTTCAAACAGAGAAAAATGGTCTCGAAATTTCATACACTTTGTCATGCAATATGACATTGTGCCTAGGATTTTTCTTGCTCCTTTCTCTTCCATTGAAAAGCTTATTGGTCCTGTTCTTCAGCTTTTGACTCCTAACAACAACTCCTTAACTCAAGATCCAATAAGAGACAGTGTGACTTGTGAGTTTTACTCCACTGTGATGAGGAATGCAGCAACTGTTACAAGCCATGTTGCTTGTAATCTAATGGGAAGCACAAATTTGTTGTTGGAGACTATGACAAATTTTGTCGAGTTAAGTCCGTATAGACCCTTTGGGACTTACATTTTCTGCAATGGTAATGGCCAGCTGATTGTGGTAAAAAACTCAGACGCTGTTTTACAACTTCTGTTTCATATTGCTCAGCTAAGAGATTTGGCACAACTTTCTGAAGTTGCCAACAAAAGCATACTGCAGCATCTAGCCTACGAAGCTGAATTAGAGGAGAGCTTAGGAATGCAAAATGTGGTGTACTTAAACAAACTTGACGATCTTCCTTTGTCTGCTGGTGATGGTCATGATACCGACATTGCAGCCGCCCTGGATAGCCTTGGACTGAGCGCAAGAGCGCGACTGTGCCTTCGAGCAGCTGGCGAGTTAGAAAAGCAAAAAGAAAGAAATGAAGAGAAAATAAAAAAGGAGTTTCAGGAGAAGGCCGTCCCAAGCATGAGGGATTTGGAAGAGTACAAATCAACATGTGAGATAAACAATGGAAAAGGTTATTATGATGCCTTCAAGGTGCAAAAGGATCCAAAGGATTTCCAAGCAAACGTGAAGAGACTTGTGCTTGCAGGAGTATGGGATGAGATCATTGAAATGCTGAAGAGGTATGAACTGCCAGATGAGTTTGAAGGGAAAAAAGAATGGATTGAACTCGGAACGAGATTCCGTCAACTTGTTGAGCCTCTAGATATTGCCAATTATCACCGTCATTTGAAGAATGAGGACACAGGACCTTACATGAACAAGGCTAGGCCAAAGAGGTATAGGTACACTCAGAGATGGTTGGAGCATGCAAACAGGTCACCAAAAGCAGAAATCACAGAATCTACCTTTTGGGCTGAGGTGGAAGAACTTTGCAGCTGGACTAGTAATAATAAACCTTTTGAAGATATCAAGGAAAGGGTTCTCAAACTTGAGCAAGATATTAAAATGTGGACTGATAAAGAGGTACTAACCAAGGATGTGTTCTCAAAGGATCCTACATTCATAAAGTTATGGGAAACTCTACCTCAGGAACATAAATCTACATCCTGCATCTCCACTCTCTTTACTGTTAAAGAATAA
Protein sequence

>Msa0466010

MGGGLVGDNIGLNEEVIKKTCSLSFKAHNSANEPYITEVFKTSPDLTEYLVISFPGSWVETDWFVRKSFGETKIDLAKFHLLKSVGNDETALVNQAFFNRFDRLLKLSSFVAEVKKAITEGKQVVFTGHSSGAVLAILATFWALEEYLYPTKIQIQHKSPMCVTFGSPLVGNHIFSHASNREKWSRNFIHFVMQYDIVPRIFLAPFSSIEKLIGPVLQLLTPNNNSLTQDPIRDSVTCEFYSTVMRNAATVTSHVACNLMGSTNLLLETMTNFVELSPYRPFGTYIFCNGNGQLIVVKNSDAVLQLLFHIAQLRDLAQLSEVANKSILQHLAYEAELEESLGMQNVVYLNKLDDLPLSAGDGHDTDIAAALDSLGLSARARLCLRAAGELEKQKERNEEKIKKEFQEKAVPSMRDLEEYKSTCEINNGKGYYDAFKVQKDPKDFQANVKRLVLAGVWDEIIEMLKRYELPDEFEGKKEWIELGTRFRQLVEPLDIANYHRHLKNEDTGPYMNKARPKRYRYTQRWLEHANRSPKAEITESTFWAEVEELCSWTSNNKPFEDIKERVLKLEQDIKMWTDKEVLTKDVFSKDPTFIKLWETLPQEHKSTSCISTLFTVKE*