AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1138550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1138550 MtrunA17_Chr7g0219531 63.704 270 41 6 11 228 1 265 1.35e-109 315
Msa1138550 MtrunA17_Chr7g0219541 61.255 271 52 5 11 228 1 271 1.76e-103 300
Msa1138550 MtrunA17_Chr7g0219521 68.950 219 16 4 11 181 1 215 4.48e-96 279
Msa1138550 MtrunA17_Chr7g0219551 48.617 253 79 3 20 221 52 304 3.60e-75 229
Msa1138550 MtrunA17_Chr2g0308461 39.726 219 79 3 56 221 281 499 1.61e-43 153
Msa1138550 MtrunA17_Chr7g0219511 93.750 48 3 0 181 228 23 70 2.09e-27 99.8
Msa1138550 MtrunA17_Chr7g0265691 37.324 142 73 3 92 222 123 259 8.47e-27 103
Msa1138550 MtrunA17_Chr7g0265701 28.395 243 113 4 34 221 15 251 1.55e-26 102
Msa1138550 MtrunA17_Chr7g0265581 32.877 146 80 4 84 218 70 208 1.01e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1138550 AT3G29760.5 49.275 138 60 1 91 218 379 516 8.40e-46 159
Msa1138550 AT3G29760.3 49.275 138 60 1 91 218 379 516 8.40e-46 159
Msa1138550 AT3G29760.2 48.507 134 59 1 95 218 409 542 7.08e-42 149
Msa1138550 AT4G26190.2 37.559 213 84 3 57 220 843 1055 1.51e-38 142
Msa1138550 AT4G26190.5 37.559 213 84 3 57 220 843 1055 1.51e-38 142
Msa1138550 AT4G26190.3 37.559 213 84 3 57 220 843 1055 1.51e-38 142
Msa1138550 AT4G26190.1 37.559 213 84 3 57 220 843 1055 1.51e-38 142
Msa1138550 AT4G26190.4 37.559 213 84 3 57 220 843 1055 1.51e-38 142
Msa1138550 AT3G29760.1 54.321 81 35 1 91 171 379 457 3.90e-25 102
Msa1138550 AT2G36550.1 35.338 133 68 3 100 222 17 141 3.18e-21 86.3
Msa1138550 AT2G36540.1 30.645 186 82 6 76 222 72 249 2.69e-20 86.7

Find 40 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATTATTCTTGATTTAAA+TGG 0.148881 7_4:+8085663 Msa1138550:CDS
TGAAGGATTTAAGGAAAATT+TGG 0.179094 7_4:+8093728 Msa1138550:CDS
GATAGATAAAAGAAAGAAAA+TGG 0.235743 7_4:+8085500 Msa1138550:CDS
CTTAAATCCTTCAAAACTAT+TGG 0.256256 7_4:-8093718 None:intergenic
GAAGGATTTAAGGAAAATTT+GGG 0.311259 7_4:+8093729 Msa1138550:CDS
GCATCTGGTGTGACCTCCTT+TGG 0.321436 7_4:-8085714 None:intergenic
CACTGAAACAAATGAATCTT+GGG 0.372355 7_4:+8094791 Msa1138550:CDS
CCCTTCTCCCAGGGAAGATT+AGG 0.377081 7_4:-8093763 None:intergenic
TCACTGAAACAAATGAATCT+TGG 0.393898 7_4:+8094790 Msa1138550:CDS
CTTACATGATCTCCTGCCTA+TGG 0.409797 7_4:-8085739 None:intergenic
ACTGGCAAGTGTTGAAAATA+TGG 0.423243 7_4:+8094728 Msa1138550:CDS
CTCCTGCCTATGGTTGCATC+TGG 0.436291 7_4:-8085729 None:intergenic
TCATCAAAAGAAATACCAAT+TGG 0.440823 7_4:+8085624 Msa1138550:CDS
GTGATCCGTTCTTGACCAAA+TGG 0.457924 7_4:-8094771 None:intergenic
TTCTTCCTCAAACATCCAAT+TGG 0.463837 7_4:-8085639 None:intergenic
AAATACCAATTGGATGTTTG+AGG 0.466266 7_4:+8085634 Msa1138550:CDS
AGGATTAAGCAGTGCCTTGT+GGG 0.466605 7_4:-8093827 None:intergenic
TTCTCATAACTGAATGTATG+AGG 0.469336 7_4:-8093965 None:intergenic
TATGTAGAGCAACATCCATT+TGG 0.482270 7_4:+8094756 Msa1138550:CDS
AAAAGAAAGAAAATGGTTGT+TGG 0.501345 7_4:+8085507 Msa1138550:CDS
AGTATGATCCTAATCTTCCC+TGG 0.506049 7_4:+8093755 Msa1138550:CDS
CCTAATCTTCCCTGGGAGAA+GGG 0.519228 7_4:+8093763 Msa1138550:CDS
TCCTAATCTTCCCTGGGAGA+AGG 0.522345 7_4:+8093762 Msa1138550:CDS
AATGGTTGTTGGTGTAGTAA+AGG 0.525142 7_4:+8085518 Msa1138550:CDS
TATTGTTTCTTCACATCCAA+AGG 0.529429 7_4:+8085698 Msa1138550:CDS
CACCAGATGCAACCATAGGC+AGG 0.543471 7_4:+8085727 Msa1138550:CDS
AAACACTATTTATAACATTG+AGG 0.554361 7_4:-8094821 None:intergenic
TGAGTCAAACACTTTGCTGT+TGG 0.555205 7_4:+8093795 Msa1138550:CDS
AATCAGAGTGACAATTCTCT+AGG 0.564562 7_4:+8093986 Msa1138550:CDS
CAGGATTAAGCAGTGCCTTG+TGG 0.568364 7_4:-8093828 None:intergenic
AACATCCATTTGGTCAAGAA+CGG 0.582203 7_4:+8094766 Msa1138550:CDS
ATTGTAATATCCCTTCTCCC+AGG 0.585172 7_4:-8093773 None:intergenic
GTATGATCCTAATCTTCCCT+GGG 0.587699 7_4:+8093756 Msa1138550:CDS
ACGCCAATATCTAGAAGGAC+TGG 0.596511 7_4:+8094710 Msa1138550:intron
TTGTAATATCCCTTCTCCCA+GGG 0.598197 7_4:-8093772 None:intergenic
TGAGGAAAGATTGAGTTGAA+TGG 0.599638 7_4:-8093947 None:intergenic
TGTTTCTTCACATCCAAAGG+AGG 0.627350 7_4:+8085701 Msa1138550:CDS
GTTGGATGATTCTCCCCACA+AGG 0.654823 7_4:+8093813 Msa1138550:CDS
GGATTAAGCAGTGCCTTGTG+GGG 0.670885 7_4:-8093826 None:intergenic
GTCACACCAGATGCAACCAT+AGG 0.682655 7_4:+8085723 Msa1138550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTCTTTAAATTATTGT+CGG - chr7_4:8085948-8085967 None:intergenic 10.0%
!! TTAACACAATAAATAAAAAA+TGG - chr7_4:8093602-8093621 None:intergenic 10.0%
!!! TAAAATTATGTATATTTTTC+AGG - chr7_4:8094396-8094415 None:intergenic 10.0%
!! CTTATTATTCTTGATTTAAA+TGG + chr7_4:8085663-8085682 Msa1138550:CDS 15.0%
!!! TTTTTTGTTGACTTTTTTAA+TGG + chr7_4:8085785-8085804 Msa1138550:intron 15.0%
!!! ATTAAGCATTATTTTTGTTT+TGG - chr7_4:8086743-8086762 None:intergenic 15.0%
!! TGATTAATATAAGAAGAAAT+AGG + chr7_4:8089849-8089868 Msa1138550:intron 15.0%
!! GATTAATATAAGAAGAAATA+GGG + chr7_4:8089850-8089869 Msa1138550:intron 15.0%
!!! TGATTTTGATTTTAAAAGAA+TGG + chr7_4:8090664-8090683 Msa1138550:intron 15.0%
!! TTTATTATTATGAACAATAG+AGG + chr7_4:8090871-8090890 Msa1138550:intron 15.0%
!! TTATTATTATGAACAATAGA+GGG + chr7_4:8090872-8090891 Msa1138550:intron 15.0%
!!! TATTTCTATCATTTTATTCA+TGG - chr7_4:8093274-8093293 None:intergenic 15.0%
!! AATAAACTTATAACAAACAT+TGG - chr7_4:8093303-8093322 None:intergenic 15.0%
!!! AGTTTATTAAATTTTATTCC+TGG + chr7_4:8093315-8093334 Msa1138550:intron 15.0%
!!! GTTTATTAAATTTTATTCCT+GGG + chr7_4:8093316-8093335 Msa1138550:intron 15.0%
!! AAAAATATTCTCATAGAAAA+TGG + chr7_4:8093359-8093378 Msa1138550:intron 15.0%
!! TAATTTATTCTCATATTCAT+GGG - chr7_4:8093399-8093418 None:intergenic 15.0%
!! TTATTTATTGTGTTAAACAT+TGG + chr7_4:8093606-8093625 Msa1138550:intron 15.0%
!! ATAAATGAAGAAAAATACAA+AGG - chr7_4:8093871-8093890 None:intergenic 15.0%
!!! TAATTTTAATCATTCACATA+TGG + chr7_4:8094408-8094427 Msa1138550:intron 15.0%
!! GATAGATAAAAGAAAGAAAA+TGG + chr7_4:8085500-8085519 Msa1138550:CDS 20.0%
!! AAAAATATAACCACAATTGT+TGG + chr7_4:8086008-8086027 Msa1138550:intron 20.0%
!! TAAGAAAATGCATTAATTCA+TGG - chr7_4:8086140-8086159 None:intergenic 20.0%
!!! ACTCGTGTTTTATAATTTTT+AGG + chr7_4:8086357-8086376 Msa1138550:intron 20.0%
!!! CTCGTGTTTTATAATTTTTA+GGG + chr7_4:8086358-8086377 Msa1138550:intron 20.0%
!!! AGTATCATTGATTATTTGAT+GGG + chr7_4:8086392-8086411 Msa1138550:intron 20.0%
!!! ATTTATGTTGAAGTATTTTG+TGG - chr7_4:8086817-8086836 None:intergenic 20.0%
!!! TAGTAGGATTTTGTTTATTT+TGG + chr7_4:8087047-8087066 Msa1138550:intron 20.0%
!!! TTAGTGTTTTTCTTTGTTTT+GGG - chr7_4:8087717-8087736 None:intergenic 20.0%
!!! TTTAGTGTTTTTCTTTGTTT+TGG - chr7_4:8087718-8087737 None:intergenic 20.0%
!! TATTCATTACTTGTAAATGA+AGG + chr7_4:8088103-8088122 Msa1138550:intron 20.0%
!! TTGTTCAAAATCAAAGATTT+GGG - chr7_4:8089123-8089142 None:intergenic 20.0%
!! ACATAATCTTGTAAATATGA+AGG + chr7_4:8089900-8089919 Msa1138550:intron 20.0%
!! AAACAAAAATTTCTCTTGTA+TGG + chr7_4:8090147-8090166 Msa1138550:intron 20.0%
!!! ATACAACTTTTTAAAGTGTT+TGG - chr7_4:8090290-8090309 None:intergenic 20.0%
!!! ACTTTAAAAAGTTGTATATC+AGG + chr7_4:8090293-8090312 Msa1138550:intron 20.0%
!!! ATTGCTACATTTTGATATAT+GGG - chr7_4:8090768-8090787 None:intergenic 20.0%
!!! AATTGCTACATTTTGATATA+TGG - chr7_4:8090769-8090788 None:intergenic 20.0%
!! ATAAGGTTTAATTGACATAA+AGG + chr7_4:8091199-8091218 Msa1138550:intron 20.0%
!!! ATATTTTCTCTCTCTTAATA+TGG - chr7_4:8088069-8088088 None:intergenic 20.0%
!! TATTCATTACTTGTAAATGA+AGG + chr7_4:8088103-8088122 Msa1138550:intron 20.0%
!! AAGACATATCTCAATATTAT+CGG + chr7_4:8093083-8093102 Msa1138550:intron 20.0%
!!! ATGAGAATATTTTTTTTCCT+AGG - chr7_4:8093353-8093372 None:intergenic 20.0%
!! CTAATTTATTCTCATATTCA+TGG - chr7_4:8093400-8093419 None:intergenic 20.0%
!! ATTATAATAGGAAGGTTAAT+GGG - chr7_4:8093433-8093452 None:intergenic 20.0%
!! TATTATAATAGGAAGGTTAA+TGG - chr7_4:8093434-8093453 None:intergenic 20.0%
!! ATTCCTGAAACTATTATAAT+AGG - chr7_4:8093445-8093464 None:intergenic 20.0%
!! TTCTTATATGTAAAGTCATA+AGG + chr7_4:8094026-8094045 Msa1138550:intron 20.0%
!! TAAAAAGTTAAAGTTGCTTA+TGG - chr7_4:8094195-8094214 None:intergenic 20.0%
!! AAACACTATTTATAACATTG+AGG - chr7_4:8094824-8094843 None:intergenic 20.0%
! AAAAGAAAGAAAATGGTTGT+TGG + chr7_4:8085507-8085526 Msa1138550:CDS 25.0%
! TCATCAAAAGAAATACCAAT+TGG + chr7_4:8085624-8085643 Msa1138550:CDS 25.0%
! AAAACGCTTAACTAAATGAT+TGG - chr7_4:8085884-8085903 None:intergenic 25.0%
!! TAAATTATTGTCGGTATTGA+TGG - chr7_4:8085939-8085958 None:intergenic 25.0%
!! AATCAGTAATCACAAGTTTT+TGG + chr7_4:8085982-8086001 Msa1138550:intron 25.0%
!! ATCAGTAATCACAAGTTTTT+GGG + chr7_4:8085983-8086002 Msa1138550:intron 25.0%
!!! ACACCTTTAATTTGAAATGT+CGG + chr7_4:8086051-8086070 Msa1138550:intron 25.0%
! ATGGATTCAAATCATATACA+CGG - chr7_4:8086121-8086140 None:intergenic 25.0%
!!! TTTTTTTTCCAGTATTCAAG+AGG + chr7_4:8086166-8086185 Msa1138550:intron 25.0%
! TTCAGAAATTCATGAGAAAA+AGG - chr7_4:8086213-8086232 None:intergenic 25.0%
!! CAGTATCATTGATTATTTGA+TGG + chr7_4:8086391-8086410 Msa1138550:intron 25.0%
!!! AACAAATGTTGATTTTCACT+TGG + chr7_4:8086423-8086442 Msa1138550:CDS 25.0%
!!! ACAAATGTTGATTTTCACTT+GGG + chr7_4:8086424-8086443 Msa1138550:CDS 25.0%
!! TCAAAATTGGGATTTTTCTT+CGG + chr7_4:8086579-8086598 Msa1138550:intron 25.0%
! AAAATGACAATCAAAATCGA+AGG + chr7_4:8086633-8086652 Msa1138550:intron 25.0%
!!! TACATGATTTTGAAAGATTC+TGG - chr7_4:8086983-8087002 None:intergenic 25.0%
!!! TGAATTTTGGAATTTAAGTC+AGG + chr7_4:8087120-8087139 Msa1138550:intron 25.0%
!! CTTCATTAAAGAACAAGTTT+TGG + chr7_4:8087871-8087890 Msa1138550:intron 25.0%
!! TTTTCTCTCTCTTAATAGTA+GGG - chr7_4:8088066-8088085 None:intergenic 25.0%
!! ATTTTCTCTCTCTTAATAGT+AGG - chr7_4:8088067-8088086 None:intergenic 25.0%
! CTTGTTCAAAATCAAAGATT+TGG - chr7_4:8089124-8089143 None:intergenic 25.0%
!!! CAAATCTTTGATTTTGAACA+AGG + chr7_4:8089122-8089141 Msa1138550:intron 25.0%
! GGTATCCAAAATAGATTTAA+TGG + chr7_4:8089143-8089162 Msa1138550:intron 25.0%
! ATCCAAAATAGATTTAATGG+AGG + chr7_4:8089146-8089165 Msa1138550:intron 25.0%
!! TACCTCCATTAAATCTATTT+TGG - chr7_4:8089151-8089170 None:intergenic 25.0%
! TTTGTTTGATGAAAAGAGAA+TGG + chr7_4:8089244-8089263 Msa1138550:intron 25.0%
!! TTAATAACGCTTTTCTTCAT+GGG - chr7_4:8089443-8089462 None:intergenic 25.0%
!!! CTATTTTGATACTTTTTCTC+CGG - chr7_4:8089541-8089560 None:intergenic 25.0%
! TTTCTTCCAACAATCAAATT+TGG + chr7_4:8089746-8089765 Msa1138550:intron 25.0%
! TTTGTTAAACATGACTTGAT+AGG + chr7_4:8090319-8090338 Msa1138550:intron 25.0%
! TTGTTAAACATGACTTGATA+GGG + chr7_4:8090320-8090339 Msa1138550:intron 25.0%
!! AAATTGTTTAAAACTGGAGT+AGG + chr7_4:8090347-8090366 Msa1138550:intron 25.0%
! CATGGAAATTATAGAAATCA+GGG + chr7_4:8090540-8090559 Msa1138550:intron 25.0%
! TTTAGGAGTTATATGAAACT+GGG + chr7_4:8090598-8090617 Msa1138550:intron 25.0%
!!! ATTTTAAAAGAATGGTCCAA+AGG + chr7_4:8090672-8090691 Msa1138550:intron 25.0%
! ATTTCTATTTCATCTGTTCA+TGG - chr7_4:8090740-8090759 None:intergenic 25.0%
! ATGAACAGATGAAATAGAAA+TGG + chr7_4:8090739-8090758 Msa1138550:intron 25.0%
! TGAACAGATGAAATAGAAAT+GGG + chr7_4:8090740-8090759 Msa1138550:intron 25.0%
!!! TTGCTACATTTTGATATATG+GGG - chr7_4:8090767-8090786 None:intergenic 25.0%
!!! ACAAGGATAGTAGTTTTATT+TGG + chr7_4:8091283-8091302 Msa1138550:intron 25.0%
!!! GACTTTTGTTATCAAAAACA+TGG - chr7_4:8091700-8091719 None:intergenic 25.0%
!! TCTATCAATAATTTGAAGCA+AGG - chr7_4:8092153-8092172 None:intergenic 25.0%
!!! TTTGTTTCTTTGATTCGTTT+TGG - chr7_4:8092652-8092671 None:intergenic 25.0%
! AATATTCTCATAGAAAATGG+TGG + chr7_4:8093362-8093381 Msa1138550:intron 25.0%
! ATATTCTCATAGAAAATGGT+GGG + chr7_4:8093363-8093382 Msa1138550:intron 25.0%
! CTGAAACTATTATAATAGGA+AGG - chr7_4:8093441-8093460 None:intergenic 25.0%
! CTTCCTATTATAATAGTTTC+AGG + chr7_4:8093439-8093458 Msa1138550:intron 25.0%
!!! TTCCTATGAATGTTATTTCT+GGG - chr7_4:8093489-8093508 None:intergenic 25.0%
!!! ATTCCTATGAATGTTATTTC+TGG - chr7_4:8093490-8093509 None:intergenic 25.0%
! CTTAAATCCTTCAAAACTAT+TGG - chr7_4:8093721-8093740 None:intergenic 25.0%
!!! CAATAGTTTTGAAGGATTTA+AGG + chr7_4:8093719-8093738 Msa1138550:CDS 25.0%
! TGAAGGATTTAAGGAAAATT+TGG + chr7_4:8093728-8093747 Msa1138550:CDS 25.0%
! GAAGGATTTAAGGAAAATTT+GGG + chr7_4:8093729-8093748 Msa1138550:CDS 25.0%
! TGAAGAAAAATACAAAGGAA+GGG - chr7_4:8093866-8093885 None:intergenic 25.0%
! ATGAAGAAAAATACAAAGGA+AGG - chr7_4:8093867-8093886 None:intergenic 25.0%
! CAAAACATTAAGCATAAGTT+AGG - chr7_4:8093918-8093937 None:intergenic 25.0%
! TGCAAAATGTTAAAAGAGAA+TGG - chr7_4:8094068-8094087 None:intergenic 25.0%
! TTATTCAAATCAATCCAAAC+AGG - chr7_4:8094111-8094130 None:intergenic 25.0%
! TCACAAAAAATGCTCTAATT+AGG + chr7_4:8094486-8094505 Msa1138550:intron 25.0%
!! CATTTTCTTTTCCTGTTAAA+GGG + chr7_4:8094509-8094528 Msa1138550:intron 25.0%
!! ATTAATGCATAGCAAGTTTT+GGG - chr7_4:8094554-8094573 None:intergenic 25.0%
!! AATTAATGCATAGCAAGTTT+TGG - chr7_4:8094555-8094574 None:intergenic 25.0%
!!! ACTTGCTATGCATTAATTTT+TGG + chr7_4:8094557-8094576 Msa1138550:intron 25.0%
!!! CTATGCATTAATTTTTGGAT+AGG + chr7_4:8094562-8094581 Msa1138550:intron 25.0%
!!! AGTAATTACGTTAGTTTTCA+AGG + chr7_4:8094601-8094620 Msa1138550:intron 25.0%
!! TCATCTTTTTCATCACTAAC+TGG - chr7_4:8085582-8085601 None:intergenic 30.0%
TAGTGATGAAAAAGATGAAG+AGG + chr7_4:8085584-8085603 Msa1138550:CDS 30.0%
AAATACCAATTGGATGTTTG+AGG + chr7_4:8085634-8085653 Msa1138550:CDS 30.0%
! TATTGTTTCTTCACATCCAA+AGG + chr7_4:8085698-8085717 Msa1138550:CDS 30.0%
! TTTTCAAATAGATTGTCCTC+TGG + chr7_4:8086503-8086522 Msa1138550:intron 30.0%
!!! AGAATCTGTTTTGGTAGATT+TGG + chr7_4:8086526-8086545 Msa1138550:intron 30.0%
! CAAAATTGGGATTTTTCTTC+GGG + chr7_4:8086580-8086599 Msa1138550:intron 30.0%
AAAATCGCATTCAAAATCGA+TGG + chr7_4:8086711-8086730 Msa1138550:intron 30.0%
!! TATGTTGAAGTATTTTGTGG+AGG - chr7_4:8086814-8086833 None:intergenic 30.0%
!! TATACATGTCAATTTTGACC+CGG - chr7_4:8086951-8086970 None:intergenic 30.0%
! TAAAATCTTGCGATTTTGCA+TGG + chr7_4:8087001-8087020 Msa1138550:intron 30.0%
!! GATTTTGATGCGATTTTAGT+AGG + chr7_4:8087031-8087050 Msa1138550:intron 30.0%
CAATGAATTTGAATCGTTGA+AGG + chr7_4:8087077-8087096 Msa1138550:intron 30.0%
! AGTCGCAAAATCTTGAATTT+TGG + chr7_4:8087107-8087126 Msa1138550:intron 30.0%
TGTTACAATCTTGTGAGATT+TGG + chr7_4:8087194-8087213 Msa1138550:intron 30.0%
! TTAGAAAAGGTACACTCAAA+GGG - chr7_4:8087845-8087864 None:intergenic 30.0%
! TTTGAGTGTACCTTTTCTAA+CGG + chr7_4:8087845-8087864 Msa1138550:intron 30.0%
!!! CAGCTTTTAGAGTGTATTAA+AGG - chr7_4:8087897-8087916 None:intergenic 30.0%
! CACTCTAAAAGCTGAAAATT+TGG + chr7_4:8087903-8087922 Msa1138550:intron 30.0%
! TACTTGTAAATGAAGGTACA+AGG + chr7_4:8088110-8088129 Msa1138550:intron 30.0%
! ACTTGTAAATGAAGGTACAA+GGG + chr7_4:8088111-8088130 Msa1138550:intron 30.0%
GGGTTTATATACATACATGA+AGG + chr7_4:8088132-8088151 Msa1138550:intron 30.0%
AGGAATATGATAAGCTATGA+TGG + chr7_4:8088152-8088171 Msa1138550:intron 30.0%
TTGGATAAAAGAAGAGTGAA+AGG + chr7_4:8088294-8088313 Msa1138550:intron 30.0%
! AGAAACAAGTAACTGTTTCT+AGG - chr7_4:8088614-8088633 None:intergenic 30.0%
AGATATCTGAAAAATTGTCC+AGG - chr7_4:8088778-8088797 None:intergenic 30.0%
TGTGTGATATAAGTAATGTC+TGG + chr7_4:8088862-8088881 Msa1138550:intron 30.0%
CATTTCTTCCTATAGAAGAT+TGG - chr7_4:8088920-8088939 None:intergenic 30.0%
TAGGAAGAAATGTCTTCATA+AGG + chr7_4:8088928-8088947 Msa1138550:intron 30.0%
! CACAATTTTACTTGTGTATG+TGG - chr7_4:8089211-8089230 None:intergenic 30.0%
! TAAAATTGTGTAAGAAGTGC+TGG + chr7_4:8089221-8089240 Msa1138550:intron 30.0%
AAGCTCAATAAATCTCTCTA+TGG - chr7_4:8089351-8089370 None:intergenic 30.0%
! TAATAACGCTTTTCTTCATG+GGG - chr7_4:8089442-8089461 None:intergenic 30.0%
! GTTAATAACGCTTTTCTTCA+TGG - chr7_4:8089444-8089463 None:intergenic 30.0%
! AAAGGGTATACACAAATAGA+AGG - chr7_4:8089570-8089589 None:intergenic 30.0%
AAGCTACCAAATTTGATTGT+TGG - chr7_4:8089755-8089774 None:intergenic 30.0%
!! TTAGTTCTAGTTGAATTTCG+AGG + chr7_4:8089930-8089949 Msa1138550:intron 30.0%
ACAGAAGAATTATCAGGAAT+GGG + chr7_4:8090017-8090036 Msa1138550:intron 30.0%
AGAAGAAAAATATTCCCAAC+TGG + chr7_4:8090061-8090080 Msa1138550:intron 30.0%
GAAGAAAAATATTCCCAACT+GGG + chr7_4:8090062-8090081 Msa1138550:intron 30.0%
GAAGATGGGGTAAATTTATA+TGG + chr7_4:8090092-8090111 Msa1138550:intron 30.0%
ATGGGGTAAATTTATATGGA+AGG + chr7_4:8090096-8090115 Msa1138550:intron 30.0%
TATATGGAAGGATAGTTTCA+TGG + chr7_4:8090108-8090127 Msa1138550:intron 30.0%
!!! TTGTTTTTAGGTTACAAAGC+TGG - chr7_4:8090200-8090219 None:intergenic 30.0%
! GGAGACAAATTGTTTAAAAC+TGG + chr7_4:8090341-8090360 Msa1138550:intron 30.0%
!!! TGCTGTTTTCCTCATAAATA+GGG - chr7_4:8090375-8090394 None:intergenic 30.0%
!!! ATGCTGTTTTCCTCATAAAT+AGG - chr7_4:8090376-8090395 None:intergenic 30.0%
CCTGATTTCTATAATTTCCA+TGG - chr7_4:8090542-8090561 None:intergenic 30.0%
CCATGGAAATTATAGAAATC+AGG + chr7_4:8090539-8090558 Msa1138550:intron 30.0%
AAAGTTGTCAGATCAGATAA+TGG - chr7_4:8090581-8090600 None:intergenic 30.0%
TTATCTGATCTGACAACTTT+AGG + chr7_4:8090581-8090600 Msa1138550:intron 30.0%
! CTTTAGGAGTTATATGAAAC+TGG + chr7_4:8090597-8090616 Msa1138550:intron 30.0%
ATGATCATAGTAGATTCCTT+TGG - chr7_4:8090691-8090710 None:intergenic 30.0%
TCTACTATGATCATCAACTA+TGG + chr7_4:8090697-8090716 Msa1138550:intron 30.0%
! ACCAAGTTTAAAATGCCATA+AGG + chr7_4:8090937-8090956 Msa1138550:intron 30.0%
! TTCTATGAAGATGATTGGTT+TGG - chr7_4:8091101-8091120 None:intergenic 30.0%
CAAACTTCTATGAAGATGAT+TGG - chr7_4:8091106-8091125 None:intergenic 30.0%
TCATGATAAATGTCTGATAC+AGG - chr7_4:8091131-8091150 None:intergenic 30.0%
AAAGCTTAGCAACAGATATA+AGG + chr7_4:8091182-8091201 Msa1138550:intron 30.0%
GTGAATATAGAACATTTGTG+AGG + chr7_4:8091221-8091240 Msa1138550:intron 30.0%
AGGTTTGATTCTATGAAAAG+AGG + chr7_4:8091321-8091340 Msa1138550:intron 30.0%
!!! AATTATTGGCTTTTAGACTC+AGG - chr7_4:8091385-8091404 None:intergenic 30.0%
TGAGTCTAAAAGCCAATAAT+TGG + chr7_4:8091384-8091403 Msa1138550:intron 30.0%
GAGTCTAAAAGCCAATAATT+GGG + chr7_4:8091385-8091404 Msa1138550:intron 30.0%
TATCTTCTCTTCCCAATTAT+TGG - chr7_4:8091399-8091418 None:intergenic 30.0%
GTAAAACTGGTAGAAATAAG+AGG + chr7_4:8091445-8091464 Msa1138550:intron 30.0%
ATTAGAAGCAGCATTAACTT+TGG + chr7_4:8091648-8091667 Msa1138550:intron 30.0%
TTAGAAGCAGCATTAACTTT+GGG + chr7_4:8091649-8091668 Msa1138550:intron 30.0%
! CAAAAAGTGCAATATCTTGT+TGG + chr7_4:8091742-8091761 Msa1138550:intron 30.0%
!! ATCAGAAGCATTCAATTGAA+TGG + chr7_4:8091816-8091835 Msa1138550:intron 30.0%
AAGGGAATATACCTTGTTAA+GGG + chr7_4:8091900-8091919 Msa1138550:intron 30.0%
CTTATCATGCAATTTCTTAC+TGG - chr7_4:8091985-8092004 None:intergenic 30.0%
! ATAATTTGAAGCAAGGTTCT+AGG - chr7_4:8092146-8092165 None:intergenic 30.0%
TTTCTATGATACAGCTTATG+AGG - chr7_4:8092241-8092260 None:intergenic 30.0%
AACAAACTTGGTTTCATTGA+TGG - chr7_4:8092381-8092400 None:intergenic 30.0%
!! CCATTGATTTACTTTGATCA+TGG - chr7_4:8092550-8092569 None:intergenic 30.0%
CCATGATCAAAGTAAATCAA+TGG + chr7_4:8092547-8092566 Msa1138550:intron 30.0%
! AGAATTCTGAAAAACAGATG+AGG + chr7_4:8092600-8092619 Msa1138550:intron 30.0%
! TACTTGTAAATGAAGGTACA+AGG + chr7_4:8088110-8088129 Msa1138550:intron 30.0%
! ACTTGTAAATGAAGGTACAA+GGG + chr7_4:8088111-8088130 Msa1138550:intron 30.0%
GGGTTTATATACATACATGA+AGG + chr7_4:8088132-8088151 Msa1138550:intron 30.0%
TGAAATCACATGTTGAAAGT+CGG - chr7_4:8093064-8093083 None:intergenic 30.0%
AAACTCCGATAATCAACATA+CGG + chr7_4:8093191-8093210 Msa1138550:intron 30.0%
TTCCCAGAAATAACATTCAT+AGG + chr7_4:8093484-8093503 Msa1138550:intron 30.0%
TATGCAGTCAACATTTCTTA+AGG - chr7_4:8093540-8093559 None:intergenic 30.0%
CATGCTAATTCTTTATGGAT+TGG + chr7_4:8093571-8093590 Msa1138550:intron 30.0%
TATCCTGTCAAAGAATATGT+AGG - chr7_4:8093648-8093667 None:intergenic 30.0%
TTCTCATAACTGAATGTATG+AGG - chr7_4:8093968-8093987 None:intergenic 30.0%
GCATTAACATCAGCATAATA+TGG + chr7_4:8094085-8094104 Msa1138550:intron 30.0%
TAAACACTTGTGAGATTGTT+TGG + chr7_4:8094147-8094166 Msa1138550:intron 30.0%
AAACACTTGTGAGATTGTTT+GGG + chr7_4:8094148-8094167 Msa1138550:intron 30.0%
!! TTTATTTTCATAAGCTCTCC+AGG + chr7_4:8094216-8094235 Msa1138550:intron 30.0%
!! TTCAGGCACTTTTTGAATAA+AGG - chr7_4:8094379-8094398 None:intergenic 30.0%
! ATTCACATATGGTCTAAAAC+TGG + chr7_4:8094419-8094438 Msa1138550:intron 30.0%
! GCATTTTCTTTTCCTGTTAA+AGG + chr7_4:8094508-8094527 Msa1138550:intron 30.0%
!!! AATTACTTTTTGTCAGCTGT+CGG + chr7_4:8094678-8094697 Msa1138550:intron 30.0%
TCACTGAAACAAATGAATCT+TGG + chr7_4:8094790-8094809 Msa1138550:CDS 30.0%
CACTGAAACAAATGAATCTT+GGG + chr7_4:8094791-8094810 Msa1138550:CDS 30.0%
AATGGTTGTTGGTGTAGTAA+AGG + chr7_4:8085518-8085537 Msa1138550:CDS 35.0%
TTCTTCCTCAAACATCCAAT+TGG - chr7_4:8085642-8085661 None:intergenic 35.0%
CAAAGTCACGAAATCATGAT+TGG + chr7_4:8085850-8085869 Msa1138550:intron 35.0%
TATAACCACAATTGTTGGTC+TGG + chr7_4:8086013-8086032 Msa1138550:intron 35.0%
! GCACCGACATTTCAAATTAA+AGG - chr7_4:8086057-8086076 None:intergenic 35.0%
!! AGAGGCCTTTTTCATTATTC+AGG + chr7_4:8086184-8086203 Msa1138550:intron 35.0%
GGTCTCCTGAATAATGAAAA+AGG - chr7_4:8086192-8086211 None:intergenic 35.0%
!! TTGCTTTGAGAGATTTGAAG+TGG + chr7_4:8086236-8086255 Msa1138550:intron 35.0%
AACCTCACACGTATATACTA+AGG - chr7_4:8086558-8086577 None:intergenic 35.0%
!!! GATTTTTCTTCGGGTTGAAA+GGG + chr7_4:8086589-8086608 Msa1138550:intron 35.0%
!! CATACTAAGCTTTAGCTTGA+CGG - chr7_4:8087279-8087298 None:intergenic 35.0%
CATGTAATAGCACGTATTAG+TGG - chr7_4:8087496-8087515 None:intergenic 35.0%
! CTAATACGTGCTATTACATG+CGG + chr7_4:8087496-8087515 Msa1138550:intron 35.0%
! AAAACGAGATGCCTCTTTTT+CGG - chr7_4:8087668-8087687 None:intergenic 35.0%
!! TGGGTGTTTTAGACACTTTT+TGG - chr7_4:8087698-8087717 None:intergenic 35.0%
!!! TCAAAGGGTTGATGTCTTTT+GGG - chr7_4:8087830-8087849 None:intergenic 35.0%
! GTTAGAAAAGGTACACTCAA+AGG - chr7_4:8087846-8087865 None:intergenic 35.0%
AATGAAGAGACCGTTAGAAA+AGG - chr7_4:8087858-8087877 None:intergenic 35.0%
GATTTATGTAGAGCTACACT+GGG - chr7_4:8087950-8087969 None:intergenic 35.0%
AGATTTATGTAGAGCTACAC+TGG - chr7_4:8087951-8087970 None:intergenic 35.0%
! CTTGTAAATGAAGGTACAAG+GGG + chr7_4:8088112-8088131 Msa1138550:intron 35.0%
AGTGTAACTAATCACTTGCT+TGG + chr7_4:8088189-8088208 Msa1138550:intron 35.0%
GTGTAACTAATCACTTGCTT+GGG + chr7_4:8088190-8088209 Msa1138550:intron 35.0%
TGTAACTAATCACTTGCTTG+GGG + chr7_4:8088191-8088210 Msa1138550:intron 35.0%
ATTGGAGCATACAAAGGATA+AGG - chr7_4:8088229-8088248 None:intergenic 35.0%
! ACTCTTCTTTTATCCAAGCT+GGG - chr7_4:8088291-8088310 None:intergenic 35.0%
AAAAGAAGAGTGAAAGGTTG+AGG + chr7_4:8088300-8088319 Msa1138550:intron 35.0%
AAATGTGGAGATCTTGAAGA+AGG + chr7_4:8088523-8088542 Msa1138550:intron 35.0%
CTTAGGGAACTCTAATTTCT+TGG - chr7_4:8088644-8088663 None:intergenic 35.0%
AGGATATTCAGATGCAGATT+GGG - chr7_4:8088713-8088732 None:intergenic 35.0%
AAGGATATTCAGATGCAGAT+TGG - chr7_4:8088714-8088733 None:intergenic 35.0%
GATATAAGTAATGTCTGGTC+TGG + chr7_4:8088867-8088886 Msa1138550:intron 35.0%
TCTTCCTATAGAAGATTGGT+TGG - chr7_4:8088916-8088935 None:intergenic 35.0%
TCTCTCAAGTTACATCATGA+TGG - chr7_4:8088961-8088980 None:intergenic 35.0%
TCATGATGTAACTTGAGAGA+AGG + chr7_4:8088961-8088980 Msa1138550:intron 35.0%
CATGATGTAACTTGAGAGAA+GGG + chr7_4:8088962-8088981 Msa1138550:intron 35.0%
!! TTAGATCTACTTGCTGATTC+AGG - chr7_4:8089024-8089043 None:intergenic 35.0%
! GGTCAGTTAAAGTTTTTCCT+TGG - chr7_4:8089102-8089121 None:intergenic 35.0%
TTGAGCTTACAAACTGTGTT+AGG + chr7_4:8089363-8089382 Msa1138550:intron 35.0%
TGAGCTTACAAACTGTGTTA+GGG + chr7_4:8089364-8089383 Msa1138550:intron 35.0%
!!! TGTTAGGGTTTTGAACTGTA+AGG + chr7_4:8089379-8089398 Msa1138550:intron 35.0%
GTTTATATGACATTACCTCC+AGG - chr7_4:8089405-8089424 None:intergenic 35.0%
! TTTTCTTCATGGGGATTTAC+AGG - chr7_4:8089433-8089452 None:intergenic 35.0%
ATGGAGATGCCAATGTTTAA+TGG + chr7_4:8089473-8089492 Msa1138550:intron 35.0%
CCAATGTTTAATGGAAGCTA+GGG + chr7_4:8089482-8089501 Msa1138550:intron 35.0%
!! TGGAAGCATTGAGAGATATA+AGG - chr7_4:8089607-8089626 None:intergenic 35.0%
! AAATTTGGTAGCTTCAGCAT+AGG + chr7_4:8089761-8089780 Msa1138550:intron 35.0%
!!! ATAGGTTTTGGGCTCATTAT+GGG + chr7_4:8089779-8089798 Msa1138550:intron 35.0%
AGAAGAAATAGGGTAAGTGA+TGG + chr7_4:8089860-8089879 Msa1138550:intron 35.0%
CTAGTTGAATTTCGAGGTAA+AGG + chr7_4:8089936-8089955 Msa1138550:intron 35.0%
TCATCAATGAAAGTAGGAAC+AGG + chr7_4:8089990-8090009 Msa1138550:intron 35.0%
GACAGAAGAATTATCAGGAA+TGG + chr7_4:8090016-8090035 Msa1138550:intron 35.0%
CAGAAGAATTATCAGGAATG+GGG + chr7_4:8090018-8090037 Msa1138550:intron 35.0%
AGAAGAATTATCAGGAATGG+GGG + chr7_4:8090019-8090038 Msa1138550:intron 35.0%
TTCATGGAAAGTTACATGTC+TGG + chr7_4:8090124-8090143 Msa1138550:intron 35.0%
AGGTTACAAAGCTGGATATA+AGG - chr7_4:8090192-8090211 None:intergenic 35.0%
ACCTAAAAACAATGACTTCC+TGG + chr7_4:8090208-8090227 Msa1138550:intron 35.0%
ATAGAGCTCTACTAATGTTG+AGG + chr7_4:8090444-8090463 Msa1138550:intron 35.0%
! ACTTTTGATGAAGAATGCCA+TGG + chr7_4:8090522-8090541 Msa1138550:intron 35.0%
AAATCAGGGAGAATAAACTC+AGG + chr7_4:8090554-8090573 Msa1138550:intron 35.0%
! AAAAGCATGAGATAAGCTAG+AGG + chr7_4:8090799-8090818 Msa1138550:intron 35.0%
TGAGATAAGCTAGAGGAAAA+AGG + chr7_4:8090806-8090825 Msa1138550:intron 35.0%
! GCCTTATGGCATTTTAAACT+TGG - chr7_4:8090941-8090960 None:intergenic 35.0%
TTGAAACATTCATCAAGAGC+AGG + chr7_4:8091043-8091062 Msa1138550:intron 35.0%
CATTACCAGCATAATGAACA+AGG + chr7_4:8091266-8091285 Msa1138550:intron 35.0%
ACTATCCTTGTTCATTATGC+TGG - chr7_4:8091274-8091293 None:intergenic 35.0%
TTTGGAAGAGTAACACAAAC+AGG + chr7_4:8091301-8091320 Msa1138550:intron 35.0%
AGGAGTAGCTTGAATATGAT+TGG + chr7_4:8091465-8091484 Msa1138550:intron 35.0%
AGTAGCTTGAATATGATTGG+AGG + chr7_4:8091468-8091487 Msa1138550:intron 35.0%
!! TAGCATAATGGATCATGGTT+TGG - chr7_4:8091611-8091630 None:intergenic 35.0%
! GTTAATGCTGCTTCTAATGA+TGG - chr7_4:8091646-8091665 None:intergenic 35.0%
ACAAAAGTCAACTGTGTGAT+TGG + chr7_4:8091711-8091730 Msa1138550:intron 35.0%
CTGATGCTAAGAAATCACAA+GGG - chr7_4:8091801-8091820 None:intergenic 35.0%
TCTGATGCTAAGAAATCACA+AGG - chr7_4:8091802-8091821 None:intergenic 35.0%
CAAGGGAATATACCTTGTTA+AGG + chr7_4:8091899-8091918 Msa1138550:intron 35.0%
GAATATACCTTGTTAAGGGA+AGG + chr7_4:8091904-8091923 Msa1138550:intron 35.0%
!! ACTGGTTTGAATGACAACTT+TGG - chr7_4:8091967-8091986 None:intergenic 35.0%
TGCTAAACTCTACAGAAATG+AGG - chr7_4:8092010-8092029 None:intergenic 35.0%
ATGATACAGCTTATGAGGTA+TGG - chr7_4:8092236-8092255 None:intergenic 35.0%
AGCTGTATCATAGAAAACGA+TGG + chr7_4:8092245-8092264 Msa1138550:intron 35.0%
TGATCCAAGATTGTACAAGA+TGG + chr7_4:8092298-8092317 Msa1138550:intron 35.0%
GTAACCATCTTGTACAATCT+TGG - chr7_4:8092305-8092324 None:intergenic 35.0%
ATGGTTCCAATTATTTGGCT+TGG - chr7_4:8092437-8092456 None:intergenic 35.0%
! GCTTGATGGTTCCAATTATT+TGG - chr7_4:8092442-8092461 None:intergenic 35.0%
TAATTGGAACCATCAAGCTT+TGG + chr7_4:8092444-8092463 Msa1138550:intron 35.0%
! TTTTATGTTCATCCGAGTGA+AGG - chr7_4:8092492-8092511 None:intergenic 35.0%
TTCACTCGGATGAACATAAA+AGG + chr7_4:8092491-8092510 Msa1138550:intron 35.0%
TCACTCGGATGAACATAAAA+GGG + chr7_4:8092492-8092511 Msa1138550:intron 35.0%
TAAAAGGGAGATTCTTGATC+AGG + chr7_4:8092507-8092526 Msa1138550:intron 35.0%
GAAGAATTCAAGCACAAACA+AGG + chr7_4:8092682-8092701 Msa1138550:intron 35.0%
CGTGAAGAAAGAGTGAAAAA+AGG + chr7_4:8092732-8092751 Msa1138550:intron 35.0%
! AAGAGTGAAAAAAGGTGCAA+CGG + chr7_4:8092740-8092759 Msa1138550:intron 35.0%
ACGGAAGATGAAGGAAAAAA+CGG + chr7_4:8092759-8092778 Msa1138550:intron 35.0%
GATGAAGGAAAAAACGGTTA+TGG + chr7_4:8092765-8092784 Msa1138550:intron 35.0%
! CTTGTAAATGAAGGTACAAG+GGG + chr7_4:8088112-8088131 Msa1138550:intron 35.0%
AGGAACATGATAAGCTATGA+TGG + chr7_4:8092923-8092942 Msa1138550:intron 35.0%
AGTGTAACTAATCACTTGCT+TGG + chr7_4:8088189-8088208 Msa1138550:intron 35.0%
GTGTAACTAATCACTTGCTT+GGG + chr7_4:8088190-8088209 Msa1138550:intron 35.0%
TGTAACTAATCACTTGCTTG+GGG + chr7_4:8088191-8088210 Msa1138550:intron 35.0%
ATTGGAGCATACAAAGGATA+AGG - chr7_4:8088229-8088248 None:intergenic 35.0%
TGAAAGTCGGAGAAATATGA+TGG - chr7_4:8093051-8093070 None:intergenic 35.0%
! TTTTGTGACTGCAATCGATT+TGG - chr7_4:8093110-8093129 None:intergenic 35.0%
! TCGTACCGTATGTTGATTAT+CGG - chr7_4:8093199-8093218 None:intergenic 35.0%
CTTGAAACAAATACACCCTA+AGG - chr7_4:8093235-8093254 None:intergenic 35.0%
CAGTGCATGCTAATTCTTTA+TGG + chr7_4:8093566-8093585 Msa1138550:intron 35.0%
CATCCTACATATTCTTTGAC+AGG + chr7_4:8093642-8093661 Msa1138550:intron 35.0%
GGAAGGGTAAGTTTATTTAC+AGG - chr7_4:8093850-8093869 None:intergenic 35.0%
!! TGAGGAAAGATTGAGTTGAA+TGG - chr7_4:8093950-8093969 None:intergenic 35.0%
AATCAGAGTGACAATTCTCT+AGG + chr7_4:8093986-8094005 Msa1138550:CDS 35.0%
AAATGAGTACACCCTTTAAC+AGG - chr7_4:8094523-8094542 None:intergenic 35.0%
AGTTCTATACAGGAGTTCTA+GGG - chr7_4:8094633-8094652 None:intergenic 35.0%
AAGTTCTATACAGGAGTTCT+AGG - chr7_4:8094634-8094653 None:intergenic 35.0%
GCATAGCATAAGTTCTATAC+AGG - chr7_4:8094643-8094662 None:intergenic 35.0%
!! ACTGGCAAGTGTTGAAAATA+TGG + chr7_4:8094728-8094747 Msa1138550:CDS 35.0%
TATGTAGAGCAACATCCATT+TGG + chr7_4:8094756-8094775 Msa1138550:CDS 35.0%
AACATCCATTTGGTCAAGAA+CGG + chr7_4:8094766-8094785 Msa1138550:CDS 35.0%
TGTTTCTTCACATCCAAAGG+AGG + chr7_4:8085701-8085720 Msa1138550:CDS 40.0%
!! TTGAAATGTCGGTGCTACAA+AGG + chr7_4:8086062-8086081 Msa1138550:intron 40.0%
GAAAAAGGCCTCTTGAATAC+TGG - chr7_4:8086177-8086196 None:intergenic 40.0%
TACCAAAACAGATTCTCCAG+AGG - chr7_4:8086522-8086541 None:intergenic 40.0%
AGCCTTAGTATATACGTGTG+AGG + chr7_4:8086553-8086572 Msa1138550:intron 40.0%
ACGTGTGAGGTTGTCAAAAT+TGG + chr7_4:8086566-8086585 Msa1138550:intron 40.0%
CGTGTGAGGTTGTCAAAATT+GGG + chr7_4:8086567-8086586 Msa1138550:intron 40.0%
!!! GGATTTTTCTTCGGGTTGAA+AGG + chr7_4:8086588-8086607 Msa1138550:intron 40.0%
GTTTGTACATGTGACTCAGT+CGG - chr7_4:8086929-8086948 None:intergenic 40.0%
ACTGAGTCACATGTACAAAC+CGG + chr7_4:8086929-8086948 Msa1138550:intron 40.0%
TTGGAGAAAAGAGTCACCAT+CGG + chr7_4:8087386-8087405 Msa1138550:intron 40.0%
ACAAACGACGTTTAATCCGA+TGG - chr7_4:8087405-8087424 None:intergenic 40.0%
TGTGGAGTGGATCATATTAG+TGG - chr7_4:8087442-8087461 None:intergenic 40.0%
ATATGATCCACTCCACATGT+TGG + chr7_4:8087445-8087464 Msa1138550:intron 40.0%
ATTAGTGGTGATCAATCAGG+CGG - chr7_4:8087481-8087500 None:intergenic 40.0%
CGTATTAGTGGTGATCAATC+AGG - chr7_4:8087484-8087503 None:intergenic 40.0%
!! ATTACATGCGGATTTGGTGA+AGG + chr7_4:8087508-8087527 Msa1138550:intron 40.0%
!! ATTCTGAGGCGGTTAGTTAT+AGG + chr7_4:8087624-8087643 Msa1138550:intron 40.0%
!! TTCTGAGGCGGTTAGTTATA+GGG + chr7_4:8087625-8087644 Msa1138550:intron 40.0%
!!! GAAAAAGAGGCATCTCGTTT+TGG + chr7_4:8087667-8087686 Msa1138550:intron 40.0%
!!! CTCAAAGGGTTGATGTCTTT+TGG - chr7_4:8087831-8087850 None:intergenic 40.0%
AAGCTGAAAATTTGGATCCC+AGG + chr7_4:8087911-8087930 Msa1138550:intron 40.0%
! CACTCTTCTTTTATCCAAGC+TGG - chr7_4:8088292-8088311 None:intergenic 40.0%
! ATCAGCAACTTGTTCTTGAG+AGG + chr7_4:8088344-8088363 Msa1138550:intron 40.0%
ACTTGTTCTTGAGAGGAAAC+TGG + chr7_4:8088351-8088370 Msa1138550:intron 40.0%
GTGAGAGAAAAACTGCAATC+TGG - chr7_4:8088393-8088412 None:intergenic 40.0%
! GCAGTTTTTCTCTCACTATG+TGG + chr7_4:8088397-8088416 Msa1138550:intron 40.0%
TCATGAACGCACAAAACACT+TGG - chr7_4:8088433-8088452 None:intergenic 40.0%
TTTGTGCGTTCATGAAACAC+TGG + chr7_4:8088438-8088457 Msa1138550:intron 40.0%
TTGTGCGTTCATGAAACACT+GGG + chr7_4:8088439-8088458 Msa1138550:intron 40.0%
TGGTTGTCACAAAAGAGAAC+AGG + chr7_4:8088486-8088505 Msa1138550:intron 40.0%
TTCATCAGAGGCTGAGTATA+GGG - chr7_4:8088589-8088608 None:intergenic 40.0%
!! TGTTTCTAGGTCTTCATCAG+AGG - chr7_4:8088601-8088620 None:intergenic 40.0%
! AGTTCCCTAAGAAGAAGCAT+TGG + chr7_4:8088653-8088672 Msa1138550:intron 40.0%
GATACTAGGAGATCCATTAG+TGG - chr7_4:8088679-8088698 None:intergenic 40.0%
CATCTGAATATCCTTGCAAG+TGG + chr7_4:8088719-8088738 Msa1138550:intron 40.0%
GGAAAAAATAAACCTCTGCC+TGG + chr7_4:8088757-8088776 Msa1138550:intron 40.0%
TCTTAATGCAGCAGCATGAT+GGG + chr7_4:8088804-8088823 Msa1138550:intron 40.0%
ATAAGTAATGTCTGGTCTGG+TGG + chr7_4:8088870-8088889 Msa1138550:intron 40.0%
! CCTATAGAAGATTGGTTGGT+AGG - chr7_4:8088912-8088931 None:intergenic 40.0%
CCTACCAACCAATCTTCTAT+AGG + chr7_4:8088909-8088928 Msa1138550:intron 40.0%
!! CTTGCTGATTCAGGAACTAT+AGG - chr7_4:8089015-8089034 None:intergenic 40.0%
TAGAGATCCCAAGATGTGAA+TGG + chr7_4:8089064-8089083 Msa1138550:intron 40.0%
AGAGATCCCAAGATGTGAAT+GGG + chr7_4:8089065-8089084 Msa1138550:intron 40.0%
AAGTTGCCCATTCACATCTT+GGG - chr7_4:8089074-8089093 None:intergenic 40.0%
GAAAAGAGAATGGTCAGAGT+TGG + chr7_4:8089254-8089273 Msa1138550:intron 40.0%
CGTTATTAACATCCAGCTGA+TGG + chr7_4:8089454-8089473 Msa1138550:intron 40.0%
GCCAATGTTTAATGGAAGCT+AGG + chr7_4:8089481-8089500 Msa1138550:intron 40.0%
CCCTAGCTTCCATTAAACAT+TGG - chr7_4:8089485-8089504 None:intergenic 40.0%
AAAGCTCACTACAGTCAGAA+TGG - chr7_4:8089514-8089533 None:intergenic 40.0%
AAAATCAAACGCCATGCAGA+TGG - chr7_4:8089627-8089646 None:intergenic 40.0%
AATACCCATCTGCATCCTAT+GGG + chr7_4:8089648-8089667 Msa1138550:intron 40.0%
CCTCAAAATGTGAAACCCAT+AGG - chr7_4:8089666-8089685 None:intergenic 40.0%
! CCTATGGGTTTCACATTTTG+AGG + chr7_4:8089663-8089682 Msa1138550:intron 40.0%
CTCTTGAACAAACTGGTACT+TGG - chr7_4:8089704-8089723 None:intergenic 40.0%
! TTGATGGCTCTTGAACAAAC+TGG - chr7_4:8089711-8089730 None:intergenic 40.0%
! GTAGCTTCAGCATAGGTTTT+GGG + chr7_4:8089768-8089787 Msa1138550:intron 40.0%
!!! CATAGGTTTTGGGCTCATTA+TGG + chr7_4:8089778-8089797 Msa1138550:intron 40.0%
TGAATTTCGAGGTAAAGGAG+AGG + chr7_4:8089941-8089960 Msa1138550:intron 40.0%
ACAGGGTCATCAATGAAAGT+AGG + chr7_4:8089984-8090003 Msa1138550:intron 40.0%
TCAATGAAAGTAGGAACAGG+AGG + chr7_4:8089993-8090012 Msa1138550:intron 40.0%
CAATGAAAGTAGGAACAGGA+GGG + chr7_4:8089994-8090013 Msa1138550:intron 40.0%
!! GCCAGGAAGTCATTGTTTTT+AGG - chr7_4:8090212-8090231 None:intergenic 40.0%
GAGTAGGAACCCTATTTATG+AGG + chr7_4:8090363-8090382 Msa1138550:intron 40.0%
AACAGCATGTAGAACAGCAT+AGG + chr7_4:8090388-8090407 Msa1138550:intron 40.0%
ACAGCATAGGACCAAAAAGA+AGG + chr7_4:8090401-8090420 Msa1138550:intron 40.0%
CATAGGACCAAAAAGAAGGT+GGG + chr7_4:8090405-8090424 Msa1138550:intron 40.0%
! CTAAACTCCCACCTTCTTTT+TGG - chr7_4:8090415-8090434 None:intergenic 40.0%
! TCAACACGACCATTTTGTTG+AGG + chr7_4:8090485-8090504 Msa1138550:intron 40.0%
GTTGAGACTCCTCAACAAAA+TGG - chr7_4:8090497-8090516 None:intergenic 40.0%
GGGATACAATTCAGACATCT+TGG + chr7_4:8090892-8090911 Msa1138550:intron 40.0%
GGTTTGGCTAAACAAGTTCA+TGG - chr7_4:8091085-8091104 None:intergenic 40.0%
ACATTTGTGAGGTAAAGCTG+AGG + chr7_4:8091232-8091251 Msa1138550:intron 40.0%
GATATACCTGCATTCACTGA+AGG + chr7_4:8091415-8091434 Msa1138550:intron 40.0%
TGAAGGAGAAGCAGTAAAAC+TGG + chr7_4:8091432-8091451 Msa1138550:intron 40.0%
AATATGATTGGAGGCAGCAT+TGG + chr7_4:8091477-8091496 Msa1138550:intron 40.0%
AAGAAGGAAGAGATGCTGAA+GGG + chr7_4:8091503-8091522 Msa1138550:intron 40.0%
! ACAAGTTGAGTGTATTGCTC+TGG + chr7_4:8091553-8091572 Msa1138550:intron 40.0%
!! CATAATGGATCATGGTTTGG+AGG - chr7_4:8091608-8091627 None:intergenic 40.0%
!! GAGAGTAGCATAATGGATCA+TGG - chr7_4:8091616-8091635 None:intergenic 40.0%
TCCATTATGCTACTCTCATC+AGG + chr7_4:8091619-8091638 Msa1138550:intron 40.0%
TCCTGATGAGAGTAGCATAA+TGG - chr7_4:8091623-8091642 None:intergenic 40.0%
!! ATTAACTTTGGGTTGCTGCT+TGG + chr7_4:8091660-8091679 Msa1138550:intron 40.0%
!! TTAACTTTGGGTTGCTGCTT+GGG + chr7_4:8091661-8091680 Msa1138550:intron 40.0%
TGCTTTCTTCTTGCACTACA+AGG + chr7_4:8091881-8091900 Msa1138550:intron 40.0%
GCTTTCTTCTTGCACTACAA+GGG + chr7_4:8091882-8091901 Msa1138550:intron 40.0%
TTGTCGTTGTGATGCTACTA+GGG - chr7_4:8092034-8092053 None:intergenic 40.0%
ACACAAACACACGAAGGAAT+AGG + chr7_4:8092060-8092079 Msa1138550:intron 40.0%
TGAGTACTTCACTGAGATGA+AGG - chr7_4:8092115-8092134 None:intergenic 40.0%
AATGCGTATGCGATCAACTT+TGG + chr7_4:8092188-8092207 Msa1138550:intron 40.0%
TGATCTCAATCGAAGTGCAT+GGG - chr7_4:8092334-8092353 None:intergenic 40.0%
ATGATCTCAATCGAAGTGCA+TGG - chr7_4:8092335-8092354 None:intergenic 40.0%
CGATTGAGATCATCAATGTC+AGG + chr7_4:8092342-8092361 Msa1138550:intron 40.0%
ACGGTTCCAAGCCAAATAAT+TGG + chr7_4:8092428-8092447 Msa1138550:intron 40.0%
! ACTGTTTTGCCAAAGCTTGA+TGG - chr7_4:8092456-8092475 None:intergenic 40.0%
GGCAAAACAGTTAGAGAAGA+AGG + chr7_4:8092465-8092484 Msa1138550:intron 40.0%
GAAGGAAAAAACGGTTATGG+CGG + chr7_4:8092768-8092787 Msa1138550:intron 40.0%
AAAAACGGTTATGGCGGTTA+TGG + chr7_4:8092774-8092793 Msa1138550:intron 40.0%
ATCAGTTTCTTCTCCTTCCA+TGG - chr7_4:8092816-8092835 None:intergenic 40.0%
!! GTAGGTATTGGAGCATACAA+AGG - chr7_4:8093006-8093025 None:intergenic 40.0%
GACCGATGTTACAATCCTTA+GGG + chr7_4:8093217-8093236 Msa1138550:intron 40.0%
CACCCTAAGGATTGTAACAT+CGG - chr7_4:8093222-8093241 None:intergenic 40.0%
! CCTAGGAATCTTTTATTCCC+AGG - chr7_4:8093336-8093355 None:intergenic 40.0%
CCTGGGAATAAAAGATTCCT+AGG + chr7_4:8093333-8093352 Msa1138550:intron 40.0%
!!! TCGCAAGCCAATAGTTTTGA+AGG + chr7_4:8093711-8093730 Msa1138550:CDS 40.0%
AGTATGATCCTAATCTTCCC+TGG + chr7_4:8093755-8093774 Msa1138550:CDS 40.0%
GTATGATCCTAATCTTCCCT+GGG + chr7_4:8093756-8093775 Msa1138550:CDS 40.0%
TTGTAATATCCCTTCTCCCA+GGG - chr7_4:8093775-8093794 None:intergenic 40.0%
ATTGTAATATCCCTTCTCCC+AGG - chr7_4:8093776-8093795 None:intergenic 40.0%
! TGAGTCAAACACTTTGCTGT+TGG + chr7_4:8093795-8093814 Msa1138550:CDS 40.0%
TCAGCATAATATGGCCTGTT+TGG + chr7_4:8094094-8094113 Msa1138550:intron 40.0%
TGAGATTGTTTGGGAGAGTT+CGG + chr7_4:8094157-8094176 Msa1138550:intron 40.0%
GATCTACGCCAATATCTAGA+AGG + chr7_4:8094705-8094724 Msa1138550:intron 40.0%
TTGCCAGTCCTTCTAGATAT+TGG - chr7_4:8094716-8094735 None:intergenic 40.0%
CTTACATGATCTCCTGCCTA+TGG - chr7_4:8085742-8085761 None:intergenic 45.0%
CAACACCAGACCAACAATTG+TGG - chr7_4:8086021-8086040 None:intergenic 45.0%
! CACAATTGTTGGTCTGGTGT+TGG + chr7_4:8086019-8086038 Msa1138550:intron 45.0%
! AGAGATTTGAAGTGGCTGTG+TGG + chr7_4:8086244-8086263 Msa1138550:intron 45.0%
!! GTCCTCTGGAGAATCTGTTT+TGG + chr7_4:8086517-8086536 Msa1138550:intron 45.0%
CTGAGTCACATGTACAAACC+GGG + chr7_4:8086930-8086949 Msa1138550:intron 45.0%
TGTGATTAGTGATTCACCCG+TGG + chr7_4:8087349-8087368 Msa1138550:intron 45.0%
GTGATTAGTGATTCACCCGT+GGG + chr7_4:8087350-8087369 Msa1138550:intron 45.0%
! CACTTTTCCAACATGTGGAG+TGG - chr7_4:8087455-8087474 None:intergenic 45.0%
! GGTGACACTTTTCCAACATG+TGG - chr7_4:8087460-8087479 None:intergenic 45.0%
! CGTGCTATTACATGCGGATT+TGG + chr7_4:8087502-8087521 Msa1138550:intron 45.0%
TTAGTTATAGGGCACAGTGG+TGG + chr7_4:8087636-8087655 Msa1138550:intron 45.0%
TAGTTATAGGGCACAGTGGT+GGG + chr7_4:8087637-8087656 Msa1138550:intron 45.0%
!!! AGGGTTGATGTCTTTTGGGT+GGG - chr7_4:8087826-8087845 None:intergenic 45.0%
!!! AAGGGTTGATGTCTTTTGGG+TGG - chr7_4:8087827-8087846 None:intergenic 45.0%
GGGGATATTGGAGCATACAA+AGG - chr7_4:8088235-8088254 None:intergenic 45.0%
TTTACCAACCTCCAGCTTGT+GGG - chr7_4:8088257-8088276 None:intergenic 45.0%
ATTTACCAACCTCCAGCTTG+TGG - chr7_4:8088258-8088277 None:intergenic 45.0%
! TTCATGAAACACTGGGTTGG+TGG + chr7_4:8088446-8088465 Msa1138550:intron 45.0%
ACAAAAGAGAACAGGAAGCC+TGG + chr7_4:8088494-8088513 Msa1138550:intron 45.0%
ATCTCCACATTTCATGCACC+AGG - chr7_4:8088515-8088534 None:intergenic 45.0%
CTTCATCAGAGGCTGAGTAT+AGG - chr7_4:8088590-8088609 None:intergenic 45.0%
GTGGCCAATGCTTCTTCTTA+GGG - chr7_4:8088660-8088679 None:intergenic 45.0%
AGTGGCCAATGCTTCTTCTT+AGG - chr7_4:8088661-8088680 None:intergenic 45.0%
!! GAAGAAGCATTGGCCACTAA+TGG + chr7_4:8088663-8088682 Msa1138550:intron 45.0%
TATTCAGATGCAGATTGGGC+AGG - chr7_4:8088709-8088728 None:intergenic 45.0%
GAATATCCTTGCAAGTGGAG+AGG + chr7_4:8088724-8088743 Msa1138550:intron 45.0%
AAGTGGAGAGGCGAATTTCT+GGG + chr7_4:8088736-8088755 Msa1138550:intron 45.0%
CTGAAAAATTGTCCAGGCAG+AGG - chr7_4:8088772-8088791 None:intergenic 45.0%
CTCTTAATGCAGCAGCATGA+TGG + chr7_4:8088803-8088822 Msa1138550:intron 45.0%
TAACTTGAGAGAAGGGTCAG+AGG + chr7_4:8088969-8088988 Msa1138550:intron 45.0%
AACTTGAGAGAAGGGTCAGA+GGG + chr7_4:8088970-8088989 Msa1138550:intron 45.0%
GAAGTTGCCCATTCACATCT+TGG - chr7_4:8089075-8089094 None:intergenic 45.0%
AATGGGCAACTTCAAGTCCA+AGG + chr7_4:8089082-8089101 Msa1138550:intron 45.0%
GTGGACGACATTATTCTTGC+TGG - chr7_4:8089192-8089211 None:intergenic 45.0%
!! CAGAGTTGGCTTGAGTATAG+TGG + chr7_4:8089268-8089287 Msa1138550:intron 45.0%
TCAAGCAAGCAAGTAGGAAG+TGG - chr7_4:8089326-8089345 None:intergenic 45.0%
ATGGTCTCAAGCAAGCAAGT+AGG - chr7_4:8089332-8089351 None:intergenic 45.0%
! TTTTGAACTGTAAGGCCTGG+AGG + chr7_4:8089387-8089406 Msa1138550:intron 45.0%
ACTGTAGTGAGCTTTGCAAC+CGG + chr7_4:8089519-8089538 Msa1138550:intron 45.0%
TGAGAGATATAAGGCGCGTT+TGG - chr7_4:8089598-8089617 None:intergenic 45.0%
TCTCAATGCTTCCATCTGCA+TGG + chr7_4:8089613-8089632 Msa1138550:intron 45.0%
GAATACCCATCTGCATCCTA+TGG + chr7_4:8089647-8089666 Msa1138550:intron 45.0%
GAAACCCATAGGATGCAGAT+GGG - chr7_4:8089655-8089674 None:intergenic 45.0%
TGAAACCCATAGGATGCAGA+TGG - chr7_4:8089656-8089675 None:intergenic 45.0%
AACTGGTACTTGGACTCTTG+TGG - chr7_4:8089694-8089713 None:intergenic 45.0%
!! AGCGATGCAAGTTGAGTTGA+TGG - chr7_4:8089727-8089746 None:intergenic 45.0%
! GGTAGCTTCAGCATAGGTTT+TGG + chr7_4:8089767-8089786 Msa1138550:intron 45.0%
GGAGGGACAGAAGAATTATC+AGG + chr7_4:8090011-8090030 Msa1138550:intron 45.0%
AATGGGGGTCAAAGAAGTTG+TGG + chr7_4:8090034-8090053 Msa1138550:intron 45.0%
ATGGGGGTCAAAGAAGTTGT+GGG + chr7_4:8090035-8090054 Msa1138550:intron 45.0%
ATATTCCCAACTGGGAGTAG+TGG + chr7_4:8090070-8090089 Msa1138550:intron 45.0%
ATCTTCCACTACTCCCAGTT+GGG - chr7_4:8090078-8090097 None:intergenic 45.0%
! AACTGGGAGTAGTGGAAGAT+GGG + chr7_4:8090078-8090097 Msa1138550:intron 45.0%
GGACCTATGAGATTGCAAAG+TGG + chr7_4:8090247-8090266 Msa1138550:intron 45.0%
CCTCCACTTTGCAATCTCAT+AGG - chr7_4:8090253-8090272 None:intergenic 45.0%
CCTATGAGATTGCAAAGTGG+AGG + chr7_4:8090250-8090269 Msa1138550:intron 45.0%
GCATAGGACCAAAAAGAAGG+TGG + chr7_4:8090404-8090423 Msa1138550:intron 45.0%
AAATGCCATAAGGCAGAAGC+AGG + chr7_4:8090947-8090966 Msa1138550:intron 45.0%
GTATTCCTGCTTCTGCCTTA+TGG - chr7_4:8090955-8090974 None:intergenic 45.0%
GAGCAGGACTGTATCTGTAA+AGG + chr7_4:8091059-8091078 Msa1138550:intron 45.0%
GAAGAAGGAAGAGATGCTGA+AGG + chr7_4:8091502-8091521 Msa1138550:intron 45.0%
CTTGCTGCAACAGGCAAATT+TGG - chr7_4:8091530-8091549 None:intergenic 45.0%
CAAATTTGCCTGTTGCAGCA+AGG + chr7_4:8091528-8091547 Msa1138550:intron 45.0%
ACTTGTATCCTTGCTGCAAC+AGG - chr7_4:8091539-8091558 None:intergenic 45.0%
CAAACCATTACCAGAACCAG+TGG + chr7_4:8091579-8091598 Msa1138550:intron 45.0%
!! GTTTCCACTGGTTCTGGTAA+TGG - chr7_4:8091586-8091605 None:intergenic 45.0%
! AAATCACAAGGGCGTGGTAA+AGG - chr7_4:8091790-8091809 None:intergenic 45.0%
ATCAGAAACTGACACTGCAG+AGG + chr7_4:8091846-8091865 Msa1138550:intron 45.0%
TCAGAAACTGACACTGCAGA+GGG + chr7_4:8091847-8091866 Msa1138550:intron 45.0%
ACCTTGTTAAGGGAAGGAAG+AGG + chr7_4:8091910-8091929 Msa1138550:intron 45.0%
TCCTCTTCCTTCCCTTAACA+AGG - chr7_4:8091914-8091933 None:intergenic 45.0%
CTTGTCGTTGTGATGCTACT+AGG - chr7_4:8092035-8092054 None:intergenic 45.0%
GCATGAACACAAACACACGA+AGG + chr7_4:8092054-8092073 Msa1138550:intron 45.0%
!! CACTGAGATGAAGGCGTTAT+GGG - chr7_4:8092106-8092125 None:intergenic 45.0%
!! TCACTGAGATGAAGGCGTTA+TGG - chr7_4:8092107-8092126 None:intergenic 45.0%
TTGGGCACGAAGAACAAACT+TGG - chr7_4:8092393-8092412 None:intergenic 45.0%
! CGTTCCATGAAGCGTTCTTT+GGG - chr7_4:8092411-8092430 None:intergenic 45.0%
CCAAAGAACGCTTCATGGAA+CGG + chr7_4:8092409-8092428 Msa1138550:intron 45.0%
AGAGAAGAAGGACCTTCACT+CGG + chr7_4:8092477-8092496 Msa1138550:intron 45.0%
TGATCAGGACCTTGATTACG+AGG + chr7_4:8092522-8092541 Msa1138550:intron 45.0%
ATCATGGCTCCTCGTAATCA+AGG - chr7_4:8092534-8092553 None:intergenic 45.0%
! AAAGGTGCAACGGAAGATGA+AGG + chr7_4:8092750-8092769 Msa1138550:intron 45.0%
GATCGTAACAAACTCCTCCA+TGG + chr7_4:8092796-8092815 Msa1138550:intron 45.0%
GTAACAAACTCCTCCATGGA+AGG + chr7_4:8092800-8092819 Msa1138550:intron 45.0%
AGTTTCTTCTCCTTCCATGG+AGG - chr7_4:8092813-8092832 None:intergenic 45.0%
AATACCTACGCCTAGAGCAT+GGG + chr7_4:8093017-8093036 Msa1138550:intron 45.0%
CGACCGATGTTACAATCCTT+AGG + chr7_4:8093216-8093235 Msa1138550:intron 45.0%
AGGATTAAGCAGTGCCTTGT+GGG - chr7_4:8093830-8093849 None:intergenic 45.0%
GTTGTTTGCACAAGCAATCC+TGG - chr7_4:8094237-8094256 None:intergenic 45.0%
!! TACTTTTTGTCAGCTGTCGG+AGG + chr7_4:8094681-8094700 Msa1138550:intron 45.0%
ACGCCAATATCTAGAAGGAC+TGG + chr7_4:8094710-8094729 Msa1138550:intron 45.0%
GTGATCCGTTCTTGACCAAA+TGG - chr7_4:8094774-8094793 None:intergenic 45.0%
GTCACACCAGATGCAACCAT+AGG + chr7_4:8085723-8085742 Msa1138550:CDS 50.0%
AAAGTGACGCTCTTTCCCAC+GGG - chr7_4:8087368-8087387 None:intergenic 50.0%
CAAAGTGACGCTCTTTCCCA+CGG - chr7_4:8087369-8087388 None:intergenic 50.0%
ACGTGTGAATGTGTGCCAAG+TGG + chr7_4:8087561-8087580 Msa1138550:intron 50.0%
GTGAATGTGTGCCAAGTGGT+AGG + chr7_4:8087565-8087584 Msa1138550:intron 50.0%
CTAACCGCCTCAGAATACGT+CGG - chr7_4:8087620-8087639 None:intergenic 50.0%
! CGGTTAGTTATAGGGCACAG+TGG + chr7_4:8087633-8087652 Msa1138550:intron 50.0%
!! TGTCTTTTGGGTGGGACTAG+TGG - chr7_4:8087818-8087837 None:intergenic 50.0%
TGGGCGTAGAGGATAATCCT+GGG - chr7_4:8087931-8087950 None:intergenic 50.0%
TTACCAACCTCCAGCTTGTG+GGG - chr7_4:8088256-8088275 None:intergenic 50.0%
TTTATCCAAGCTGGGCTTGC+TGG - chr7_4:8088283-8088302 None:intergenic 50.0%
GCGTTCATGAAACACTGGGT+TGG + chr7_4:8088443-8088462 Msa1138550:intron 50.0%
!! TGGGTTGGTGGCAATGTGAA+GGG + chr7_4:8088458-8088477 Msa1138550:intron 50.0%
GAAGCCTGGTGCATGAAATG+TGG + chr7_4:8088508-8088527 Msa1138550:intron 50.0%
CACTTGTGAACTGCAGTGGT+TGG - chr7_4:8088553-8088572 None:intergenic 50.0%
CAACCACTGCAGTTCACAAG+TGG + chr7_4:8088551-8088570 Msa1138550:intron 50.0%
AATTCGCCTCTCCACTTGCA+AGG - chr7_4:8088733-8088752 None:intergenic 50.0%
CAAGTGGAGAGGCGAATTTC+TGG + chr7_4:8088735-8088754 Msa1138550:intron 50.0%
!! AGCAGCATGATGGGTTTGTG+TGG + chr7_4:8088813-8088832 Msa1138550:intron 50.0%
!! GCAGCATGATGGGTTTGTGT+GGG + chr7_4:8088814-8088833 Msa1138550:intron 50.0%
!!! GGGTTTTGAACTGTAAGGCC+TGG + chr7_4:8089384-8089403 Msa1138550:intron 50.0%
ACATTGGCATCTCCATCAGC+TGG - chr7_4:8089469-8089488 None:intergenic 50.0%
AGGCGCGTTTGGTTGCAAAA+GGG - chr7_4:8089587-8089606 None:intergenic 50.0%
AAGGCGCGTTTGGTTGCAAA+AGG - chr7_4:8089588-8089607 None:intergenic 50.0%
GGGCTCATTATGGGCATGTA+AGG + chr7_4:8089788-8089807 Msa1138550:intron 50.0%
TTTCGAGGTAAAGGAGAGGC+AGG + chr7_4:8089945-8089964 Msa1138550:intron 50.0%
TAAAGGAGAGGCAGGAGAAG+AGG + chr7_4:8089953-8089972 Msa1138550:intron 50.0%
TGGGGGTCAAAGAAGTTGTG+GGG + chr7_4:8090036-8090055 Msa1138550:intron 50.0%
CATCTTCCACTACTCCCAGT+TGG - chr7_4:8090079-8090098 None:intergenic 50.0%
! CAACTGGGAGTAGTGGAAGA+TGG + chr7_4:8090077-8090096 Msa1138550:intron 50.0%
! ACTGGGAGTAGTGGAAGATG+GGG + chr7_4:8090079-8090098 Msa1138550:intron 50.0%
AACAATGACTTCCTGGCACG+AGG + chr7_4:8090215-8090234 Msa1138550:intron 50.0%
GCAAAGTGGAGGCAAAGCAA+AGG + chr7_4:8090261-8090280 Msa1138550:intron 50.0%
GCTTCTCCTTCAGTGAATGC+AGG - chr7_4:8091424-8091443 None:intergenic 50.0%
! GAGGCAGCATTGGAAGAAGA+AGG + chr7_4:8091487-8091506 Msa1138550:intron 50.0%
!! TTGGAGGTTTCCACTGGTTC+TGG - chr7_4:8091592-8091611 None:intergenic 50.0%
! CATGGTTTGGAGGTTTCCAC+TGG - chr7_4:8091598-8091617 None:intergenic 50.0%
! GGTTGCTGCTTGGGAAAACT+AGG + chr7_4:8091670-8091689 Msa1138550:intron 50.0%
GCTAAGAAATCACAAGGGCG+TGG - chr7_4:8091796-8091815 None:intergenic 50.0%
!! TGAGATGAAGGCGTTATGGG+AGG - chr7_4:8092103-8092122 None:intergenic 50.0%
! CCGTTCCATGAAGCGTTCTT+TGG - chr7_4:8092412-8092431 None:intergenic 50.0%
! CATGCTCTAGGCGTAGGTAT+TGG - chr7_4:8093018-8093037 None:intergenic 50.0%
CAATACCTACGCCTAGAGCA+TGG + chr7_4:8093016-8093035 Msa1138550:intron 50.0%
! GGCATTTTGTCCCATGCTCT+AGG - chr7_4:8093030-8093049 None:intergenic 50.0%
TCCTAATCTTCCCTGGGAGA+AGG + chr7_4:8093762-8093781 Msa1138550:CDS 50.0%
CCTAATCTTCCCTGGGAGAA+GGG + chr7_4:8093763-8093782 Msa1138550:CDS 50.0%
GTTGGATGATTCTCCCCACA+AGG + chr7_4:8093813-8093832 Msa1138550:CDS 50.0%
GGATTAAGCAGTGCCTTGTG+GGG - chr7_4:8093829-8093848 None:intergenic 50.0%
CAGGATTAAGCAGTGCCTTG+TGG - chr7_4:8093831-8093850 None:intergenic 50.0%
GCATCTGGTGTGACCTCCTT+TGG - chr7_4:8085717-8085736 None:intergenic 55.0%
CACCAGATGCAACCATAGGC+AGG + chr7_4:8085727-8085746 Msa1138550:CDS 55.0%
CTCCTGCCTATGGTTGCATC+TGG - chr7_4:8085732-8085751 None:intergenic 55.0%
TGGCTGTGTGGTCTTCACGT+TGG + chr7_4:8086256-8086275 Msa1138550:intron 55.0%
!! CGTGGGAAAGAGCGTCACTT+TGG + chr7_4:8087367-8087386 Msa1138550:intron 55.0%
!! CGGATTTGGTGAAGGCGTGT+CGG + chr7_4:8087516-8087535 Msa1138550:intron 55.0%
GTGTGCCAAGTGGTAGGTTG+CGG + chr7_4:8087571-8087590 Msa1138550:intron 55.0%
GGTAGGTTGCGGCTTCGAAA+TGG + chr7_4:8087582-8087601 Msa1138550:intron 55.0%
TTGCTCGCCGACGTATTCTG+AGG + chr7_4:8087610-8087629 Msa1138550:intron 55.0%
! TTGGGTGGGACTAGTGGCTT+GGG - chr7_4:8087812-8087831 None:intergenic 55.0%
! TTTGGGTGGGACTAGTGGCT+TGG - chr7_4:8087813-8087832 None:intergenic 55.0%
CTGGGCGTAGAGGATAATCC+TGG - chr7_4:8087932-8087951 None:intergenic 55.0%
TAGAGCTACACTGGGCGTAG+AGG - chr7_4:8087942-8087961 None:intergenic 55.0%
ATAGTAGGGACTGCTGCGCT+AGG - chr7_4:8088052-8088071 None:intergenic 55.0%
TCCAATATCCCCCCACAAGC+TGG + chr7_4:8088243-8088262 Msa1138550:intron 55.0%
TCCAGCTTGTGGGGGGATAT+TGG - chr7_4:8088247-8088266 None:intergenic 55.0%
AATATCCCCCCACAAGCTGG+AGG + chr7_4:8088246-8088265 Msa1138550:intron 55.0%
TACCAACCTCCAGCTTGTGG+GGG - chr7_4:8088255-8088274 None:intergenic 55.0%
AATGTCCAGCAAGCCCAGCT+TGG + chr7_4:8088275-8088294 Msa1138550:intron 55.0%
!! CTGGGTTGGTGGCAATGTGA+AGG + chr7_4:8088457-8088476 Msa1138550:intron 55.0%
CAGCCACTTGTGAACTGCAG+TGG - chr7_4:8088557-8088576 None:intergenic 55.0%
! GGGCAGGCTGTGTTGATACT+AGG - chr7_4:8088693-8088712 None:intergenic 55.0%
GGGTTTGTGTGGGAGCAGAA+AGG + chr7_4:8088824-8088843 Msa1138550:intron 55.0%
AGGCAGGAGAAGAGGAAGGA+GGG + chr7_4:8089961-8089980 Msa1138550:intron 55.0%
GAGAAGAGGAAGGAGGGACA+GGG + chr7_4:8089967-8089986 Msa1138550:intron 55.0%
GGGGGTCAAAGAAGTTGTGG+GGG + chr7_4:8090037-8090056 Msa1138550:intron 55.0%
CGTGCCCAAAGAACGCTTCA+TGG + chr7_4:8092404-8092423 Msa1138550:intron 55.0%
! TTGTCCCATGCTCTAGGCGT+AGG - chr7_4:8093024-8093043 None:intergenic 55.0%
CCCTTCTCCCAGGGAAGATT+AGG - chr7_4:8093766-8093785 None:intergenic 55.0%
CGAAGCCGCAACCTACCACT+TGG - chr7_4:8087579-8087598 None:intergenic 60.0%
! CTCGCCGACGTATTCTGAGG+CGG + chr7_4:8087613-8087632 Msa1138550:intron 60.0%
GGTGGGTCGCACCGAAAAAG+AGG + chr7_4:8087654-8087673 Msa1138550:intron 60.0%
ACCAACCTCCAGCTTGTGGG+GGG - chr7_4:8088254-8088273 None:intergenic 60.0%
!! TGGCAATGTGAAGGGCGCTC+TGG + chr7_4:8088466-8088485 Msa1138550:intron 60.0%
GAGAGAAGGGTCAGAGGGAG+TGG + chr7_4:8088975-8088994 Msa1138550:intron 60.0%
GGAGAGGCAGGAGAAGAGGA+AGG + chr7_4:8089957-8089976 Msa1138550:intron 60.0%
GAGGCAGGAGAAGAGGAAGG+AGG + chr7_4:8089960-8089979 Msa1138550:intron 60.0%
GGAGAAGAGGAAGGAGGGAC+AGG + chr7_4:8089966-8089985 Msa1138550:intron 60.0%
CCAAACTTCAGCCTCGTGCC+AGG - chr7_4:8090229-8090248 None:intergenic 60.0%
CCTGGCACGAGGCTGAAGTT+TGG + chr7_4:8090226-8090245 Msa1138550:intron 60.0%
GCTCGTGTGTCTAGCGCAGC+TGG + chr7_4:8087989-8088008 Msa1138550:intron 65.0%
AGGGACTGCTGCGCTAGGTG+CGG - chr7_4:8088047-8088066 None:intergenic 65.0%
TCCCCCCACAAGCTGGAGGT+TGG + chr7_4:8088250-8088269 Msa1138550:intron 65.0%
GGGTCAGAGGGAGTGGATGC+AGG + chr7_4:8088982-8089001 Msa1138550:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 8085489 8094866 8085489 ID=Msa1138550;Name=Msa1138550
chr7_4 mRNA 8085489 8094866 8085489 ID=Msa1138550-mRNA-1;Parent=Msa1138550;Name=Msa1138550-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.5|0.4|1|0.5|0.8|5|0|228
chr7_4 exon 8085489 8085756 8085489 ID=Msa1138550-mRNA-1:exon:2225;Parent=Msa1138550-mRNA-1
chr7_4 exon 8086417 8086445 8086417 ID=Msa1138550-mRNA-1:exon:2226;Parent=Msa1138550-mRNA-1
chr7_4 exon 8093664 8093849 8093664 ID=Msa1138550-mRNA-1:exon:2227;Parent=Msa1138550-mRNA-1
chr7_4 exon 8093947 8094007 8093947 ID=Msa1138550-mRNA-1:exon:2228;Parent=Msa1138550-mRNA-1
chr7_4 exon 8094724 8094866 8094724 ID=Msa1138550-mRNA-1:exon:2229;Parent=Msa1138550-mRNA-1
chr7_4 CDS 8085489 8085756 8085489 ID=Msa1138550-mRNA-1:cds;Parent=Msa1138550-mRNA-1
chr7_4 CDS 8086417 8086445 8086417 ID=Msa1138550-mRNA-1:cds;Parent=Msa1138550-mRNA-1
chr7_4 CDS 8093664 8093849 8093664 ID=Msa1138550-mRNA-1:cds;Parent=Msa1138550-mRNA-1
chr7_4 CDS 8093947 8094007 8093947 ID=Msa1138550-mRNA-1:cds;Parent=Msa1138550-mRNA-1
chr7_4 CDS 8094724 8094866 8094724 ID=Msa1138550-mRNA-1:cds;Parent=Msa1138550-mRNA-1
Gene Sequence

>Msa1138550

TACTTGTTTTTGATAGATAAAAGAAAGAAAATGGTTGTTGGTGTAGTAAAGGTAGAAGATACTATTACTGAAGAAAATATAACAAAATTACCAGTTAGTGATGAAAAAGATGAAGAGGAAAATAATTTGTGTATTTCATCAAAAGAAATACCAATTGGATGTTTGAGGAAGAAGCTTATTATTCTTGATTTAAATGGACTTCTTGTTGATATTGTTTCTTCACATCCAAAGGAGGTCACACCAGATGCAACCATAGGCAGGAGATCATACATGAAACAAATGTTGATTTTCACTTGGGATATTTCACATTGTACTGAAACAACTTTCAAGACTCTTGAGAACAATCGCAAGCCAATAGTTTTGAAGGATTTAAGGAAAATTTGGGACAAGTATGATCCTAATCTTCCCTGGGAGAAGGGATATTACAATGAGTCAAACACTTTGCTGTTGGATGATTCTCCCCACAAGGCACTGCTTAATCCTCCATTCAACTCAATCTTTCCTCATACATTCAGTTATGAGAATCAGAGTGACAATTCTCTAGAAGGACTGGCAAGTGTTGAAAATATGGTGAAGTATGTAGAGCAACATCCATTTGGTCAAGAACGGATCACTGAAACAAATGAATCTTGGGACTTTTACCTCAATGTTATAAATAGTGTTTCTGCTTGTCAACCTGAAAAGTGA

Protein sequence

>Msa1138550

YLFLIDKRKKMVVGVVKVEDTITEENITKLPVSDEKDEEENNLCISSKEIPIGCLRKKLIILDLNGLLVDIVSSHPKEVTPDATIGRRSYMKQMLIFTWDISHCTETTFKTLENNRKPIVLKDLRKIWDKYDPNLPWEKGYYNESNTLLLDDSPHKALLNPPFNSIFPHTFSYENQSDNSLEGLASVENMVKYVEQHPFGQERITETNESWDFYLNVINSVSACQPEK*