Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039470 | NP_001365649.1 | 99.465 | 187 | 1 | 0 | 1 | 187 | 1 | 187 | 3.19e-131 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039470 | sp|O65729|RL18_CICAR | 87.500 | 184 | 22 | 1 | 4 | 187 | 1 | 183 | 1.03e-114 | 326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039470 | B7FMF5 | 99.465 | 187 | 1 | 0 | 1 | 187 | 1 | 187 | 1.53e-131 | 375 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617540 | Msa1039470 | 0.826745 | 2.291448e-54 | -8.615850e-47 |
| Msa0724140 | Msa1039470 | -0.819700 | 1.012072e-52 | -8.615850e-47 |
| Msa0827380 | Msa1039470 | 0.821619 | 3.666317e-53 | -8.615850e-47 |
| Msa0133540 | Msa1039470 | 0.838735 | 2.409686e-57 | -8.615850e-47 |
| Msa0181490 | Msa1039470 | 0.828781 | 7.429745e-55 | -8.615850e-47 |
| Msa1039470 | Msa1126520 | 0.801083 | 1.064551e-48 | -8.615850e-47 |
| Msa1039470 | Msa1341130 | 0.803452 | 3.462900e-49 | -8.615850e-47 |
| Msa1039470 | Msa1356790 | 0.805537 | 1.272365e-49 | -8.615850e-47 |
| Msa1039470 | Msa1406080 | 0.811469 | 6.891932e-51 | -8.615850e-47 |
| Msa0269180 | Msa1039470 | 0.802891 | 4.523385e-49 | -8.615850e-47 |
| Msa0297830 | Msa1039470 | 0.808629 | 2.819116e-50 | -8.615850e-47 |
| Msa0306690 | Msa1039470 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0588630 | Msa1039470 | -0.802901 | 4.501757e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039470 | MtrunA17_Chr7g0272381 | 99.465 | 187 | 1 | 0 | 1 | 187 | 1 | 187 | 2.94e-135 | 375 |
| Msa1039470 | MtrunA17_Chr7g0269451 | 87.234 | 188 | 23 | 1 | 1 | 187 | 1 | 188 | 4.72e-117 | 330 |
| Msa1039470 | MtrunA17_Chr1g0192271 | 86.096 | 187 | 26 | 0 | 1 | 187 | 1 | 187 | 1.10e-116 | 328 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039470 | AT5G27850.1 | 81.818 | 187 | 34 | 0 | 1 | 187 | 1 | 187 | 8.38e-113 | 319 |
| Msa1039470 | AT3G05590.1 | 81.283 | 187 | 35 | 0 | 1 | 187 | 1 | 187 | 4.74e-112 | 317 |
| Msa1039470 | AT2G47570.1 | 75.269 | 186 | 45 | 1 | 3 | 187 | 1 | 186 | 1.06e-100 | 288 |
| Msa1039470 | AT3G05590.3 | 80.597 | 134 | 26 | 0 | 54 | 187 | 1 | 134 | 1.00e-78 | 231 |
| Msa1039470 | AT3G05590.2 | 80.597 | 134 | 26 | 0 | 54 | 187 | 1 | 134 | 1.00e-78 | 231 |
| Msa1039470 | AT5G27850.2 | 79.851 | 134 | 27 | 0 | 54 | 187 | 1 | 134 | 1.85e-77 | 228 |
Find 80 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGAAGAGTAGAGGATTT+AGG | 0.132509 | 7_1:+76714778 | Msa1039470:CDS |
| GAGGAAGAGTAGAGGATTTA+GGG | 0.159004 | 7_1:+76714779 | Msa1039470:CDS |
| AAAACTTAATACCAATTTAT+TGG | 0.197066 | 7_1:-76714964 | None:intergenic |
| ACTGCTTCCCTAGCATTCTT+TGG | 0.206364 | 7_1:-76714663 | None:intergenic |
| ATCAACTTTGACAGAGAAAT+TGG | 0.227766 | 7_1:-76712442 | None:intergenic |
| TAGCATTCTTTGGGCCTCTT+AGG | 0.233236 | 7_1:-76714653 | None:intergenic |
| AGGTAGATATCATTGGATTT+AGG | 0.281327 | 7_1:-76711013 | None:intergenic |
| TTTGATGTCTGCCAATAAAT+TGG | 0.298187 | 7_1:+76714953 | Msa1039470:three_prime_UTR |
| ACCATTGTAGCTCAGGGTTC+TGG | 0.304346 | 7_1:-76710837 | None:intergenic |
| GGTAAAATTGGTGTCGTTGT+GGG | 0.314974 | 7_1:+76713315 | Msa1039470:CDS |
| CTGCTTCCCTAGCATTCTTT+GGG | 0.325698 | 7_1:-76714662 | None:intergenic |
| ATCAATTACCATTGTAGCTC+AGG | 0.335636 | 7_1:-76710844 | None:intergenic |
| CTTCCCTTTGATCTTACATA+AGG | 0.356102 | 7_1:-76714732 | None:intergenic |
| AATAACGTGTTGCTTAGATT+TGG | 0.356315 | 7_1:+76715090 | Msa1039470:three_prime_UTR |
| GGGCTGTAACAGATGATATC+AGG | 0.365645 | 7_1:+76713337 | Msa1039470:CDS |
| AGCCGCGAATGCATATTTAT+AGG | 0.372009 | 7_1:-76710786 | None:intergenic |
| TATATCGCTTCCTTGTTAGA+AGG | 0.375930 | 7_1:+76712356 | Msa1039470:CDS |
| GTTATGCAGGACGGTAAAAT+TGG | 0.388471 | 7_1:+76713303 | Msa1039470:intron |
| GGATTTAGGTTCGGTTCGTT+TGG | 0.400306 | 7_1:-76710999 | None:intergenic |
| TTACATTCGCCAACCATGAT+TGG | 0.408818 | 7_1:-76715044 | None:intergenic |
| GAGCTTGAGGTAGATATCAT+TGG | 0.411467 | 7_1:-76711020 | None:intergenic |
| CTTTGATCTTACATAAGGCT+TGG | 0.418522 | 7_1:-76714727 | None:intergenic |
| CAGGGGATCGATCTCAAAGC+TGG | 0.420599 | 7_1:+76710959 | Msa1039470:intron |
| GATATCATTGGATTTAGGTT+CGG | 0.438911 | 7_1:-76711008 | None:intergenic |
| TCTACTCTTCCTCTTTCCTC+TGG | 0.440211 | 7_1:-76714769 | None:intergenic |
| GGGCAAGTTGATCAAATGTT+AGG | 0.445307 | 7_1:-76713446 | None:intergenic |
| CGGTAAAATTGGTGTCGTTG+TGG | 0.446137 | 7_1:+76713314 | Msa1039470:CDS |
| TTTGTCCAAGGGGAGCTCTA+AGG | 0.449212 | 7_1:-76713467 | None:intergenic |
| TTGAGATTGTTTGTTATACA+TGG | 0.458757 | 7_1:+76714912 | Msa1039470:three_prime_UTR |
| GTGCCGTCTCTGTGAACCTA+AGG | 0.461512 | 7_1:-76713392 | None:intergenic |
| CGCCTATAAATATGCATTCG+CGG | 0.464760 | 7_1:+76710784 | None:intergenic |
| AAGCCTTATGTAAGATCAAA+GGG | 0.467688 | 7_1:+76714729 | Msa1039470:CDS |
| AAACACTTTGGTCGTGCTCC+TGG | 0.468460 | 7_1:+76714687 | Msa1039470:CDS |
| GTAAAATTGGTGTCGTTGTG+GGG | 0.476743 | 7_1:+76713316 | Msa1039470:CDS |
| CATTCTTTGGGCCTCTTAGG+AGG | 0.481833 | 7_1:-76714650 | None:intergenic |
| TAAGAGGCCCAAAGAATGCT+AGG | 0.491610 | 7_1:+76714655 | Msa1039470:CDS |
| CAAGCCTTATGTAAGATCAA+AGG | 0.498391 | 7_1:+76714728 | Msa1039470:CDS |
| TTGTCCAAGGGGAGCTCTAA+GGG | 0.500585 | 7_1:-76713466 | None:intergenic |
| TGAATTCAGGTCCTCCTAAG+AGG | 0.506122 | 7_1:+76714639 | Msa1039470:intron |
| AAGAGAAGGCCAGAGGAAAG+AGG | 0.507573 | 7_1:+76714760 | Msa1039470:CDS |
| GAATGGCTGTGTGGCACACC+AGG | 0.520029 | 7_1:-76714705 | None:intergenic |
| GAAGTATCAAAACTGTAGAA+AGG | 0.522174 | 7_1:-76714827 | None:intergenic |
| ATCTTACATAAGGCTTGGAA+TGG | 0.527336 | 7_1:-76714722 | None:intergenic |
| TGCCCTTAGGTTCACAGAGA+CGG | 0.538036 | 7_1:+76713389 | Msa1039470:CDS |
| TCAATTACCATTGTAGCTCA+GGG | 0.544705 | 7_1:-76710843 | None:intergenic |
| AAAGTTGATCGAGTACATGA+AGG | 0.551641 | 7_1:+76712456 | Msa1039470:CDS |
| AAGTTGATCGAGTACATGAA+GGG | 0.557741 | 7_1:+76712457 | Msa1039470:CDS |
| TCCAGAACCCTGAGCTACAA+TGG | 0.565719 | 7_1:+76710836 | Msa1039470:exon |
| TTTAGTTATCTACTTAGAGA+GGG | 0.568102 | 7_1:+76714985 | Msa1039470:three_prime_UTR |
| GGACCTTGACGAGGAGCTTG+AGG | 0.569815 | 7_1:-76711033 | None:intergenic |
| AGGGGATCGATCTCAAAGCT+GGG | 0.574140 | 7_1:+76710960 | Msa1039470:intron |
| CTTGCCCTTAGAGCTCCCCT+TGG | 0.575267 | 7_1:+76713462 | Msa1039470:CDS |
| TGCTGTCAGTCCTTCTAACA+AGG | 0.579764 | 7_1:-76712366 | None:intergenic |
| ATTGTAGCTCAGGGTTCTGG+AGG | 0.588756 | 7_1:-76710834 | None:intergenic |
| GGCTGTAACAGATGATATCA+GGG | 0.589836 | 7_1:+76713338 | Msa1039470:CDS |
| AGGGAAGCAGTAAAACACTT+TGG | 0.592083 | 7_1:+76714675 | Msa1039470:CDS |
| TCAAATTCAAGTTAAAAGCA+AGG | 0.593173 | 7_1:-76714935 | None:intergenic |
| CAAGCGCTTGTTCATGAGCA+AGG | 0.595633 | 7_1:+76712408 | Msa1039470:CDS |
| AACTTTGACAGAGAAATTGG+AGG | 0.595797 | 7_1:-76712439 | None:intergenic |
| AAAGGGAAGGAAACAAGAGA+AGG | 0.607313 | 7_1:+76714746 | Msa1039470:CDS |
| CGTGCAAGAATAGAGAAGGC+GGG | 0.608166 | 7_1:+76713414 | Msa1039470:CDS |
| TTGACAGAGAAATTGGAGGT+CGG | 0.608358 | 7_1:-76712435 | None:intergenic |
| TGCCGTCTCTGTGAACCTAA+GGG | 0.611665 | 7_1:-76713391 | None:intergenic |
| CTACCTCAAGCTCCTCGTCA+AGG | 0.612377 | 7_1:+76711030 | Msa1039470:CDS |
| TAAAATTGGTGTCGTTGTGG+GGG | 0.613763 | 7_1:+76713317 | Msa1039470:CDS |
| CTTATGTAAGATCAAAGGGA+AGG | 0.618781 | 7_1:+76714733 | Msa1039470:CDS |
| GGCACGTGCAAGAATAGAGA+AGG | 0.623253 | 7_1:+76713410 | Msa1039470:CDS |
| AGGAAACAAGAGAAGGCCAG+AGG | 0.627136 | 7_1:+76714753 | Msa1039470:CDS |
| AGAGGAAAGAGGAAGAGTAG+AGG | 0.627781 | 7_1:+76714771 | Msa1039470:CDS |
| AGCTCCCCTTGGACAAAACA+CGG | 0.631576 | 7_1:+76713473 | Msa1039470:CDS |
| AAGAGGCCCAAAGAATGCTA+GGG | 0.636036 | 7_1:+76714656 | Msa1039470:CDS |
| GGGGATCGATCTCAAAGCTG+GGG | 0.637375 | 7_1:+76710961 | Msa1039470:intron |
| AAATGGAATGGACCTTGACG+AGG | 0.641410 | 7_1:-76711042 | None:intergenic |
| AGTTGATCGAGTACATGAAG+GGG | 0.649783 | 7_1:+76712458 | Msa1039470:CDS |
| GATCGAGTACATGAAGGGGA+AGG | 0.663524 | 7_1:+76712462 | Msa1039470:CDS |
| ACGTGCAAGAATAGAGAAGG+CGG | 0.663924 | 7_1:+76713413 | Msa1039470:CDS |
| GCAAGAATAGAGAAGGCGGG+TGG | 0.710757 | 7_1:+76713417 | Msa1039470:CDS |
| GGGATCGATCTCAAAGCTGG+GGG | 0.738953 | 7_1:+76710962 | Msa1039470:CDS |
| GACTGACAGCAATTTCAATG+CGG | 0.745385 | 7_1:+76712378 | Msa1039470:CDS |
| TAAGGCTTGGAATGGCTGTG+TGG | 0.750805 | 7_1:-76714714 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATAAAAATAATAAA+GGG | - | chr7_1:76714270-76714289 | None:intergenic | 0.0% |
| !!! | AAATTTTATAAAAATAATAA+AGG | - | chr7_1:76714271-76714290 | None:intergenic | 0.0% |
| !! | ATACGATAAAATAAAAATTA+TGG | - | chr7_1:76711346-76711365 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAAAG+AGG | + | chr7_1:76714489-76714508 | Msa1039470:intron | 10.0% |
| !!! | ATTTTATAAGACATAGAAAA+TGG | - | chr7_1:76711062-76711081 | None:intergenic | 15.0% |
| !! | AGAATGCAAATTATTTATAA+TGG | - | chr7_1:76712011-76712030 | None:intergenic | 15.0% |
| !! | AACTAAACAATTATAATTTC+TGG | - | chr7_1:76712522-76712541 | None:intergenic | 15.0% |
| !!! | AATTAGATGTTTTTTATTGA+TGG | + | chr7_1:76712914-76712933 | Msa1039470:intron | 15.0% |
| !!! | ATTAGATGTTTTTTATTGAT+GGG | + | chr7_1:76712915-76712934 | Msa1039470:intron | 15.0% |
| !!! | AATGATCTATCTTATTTTAT+GGG | - | chr7_1:76714055-76714074 | None:intergenic | 15.0% |
| !!! | TAATGATCTATCTTATTTTA+TGG | - | chr7_1:76714056-76714075 | None:intergenic | 15.0% |
| !! | ATATTCATCATAACATAAAA+TGG | - | chr7_1:76714196-76714215 | None:intergenic | 15.0% |
| !! | ATTTGAAGAATTTAATTAGA+TGG | + | chr7_1:76714287-76714306 | Msa1039470:intron | 15.0% |
| !! | AACATGTATAATTTCAAAAA+GGG | + | chr7_1:76714531-76714550 | Msa1039470:intron | 15.0% |
| !!! | TAGTATTTTTTATGATTTGT+AGG | + | chr7_1:76714561-76714580 | Msa1039470:intron | 15.0% |
| !!! | AGTATTTTTTATGATTTGTA+GGG | + | chr7_1:76714562-76714581 | Msa1039470:intron | 15.0% |
| !! | AAAACTTAATACCAATTTAT+TGG | - | chr7_1:76714967-76714986 | None:intergenic | 15.0% |
| !!! | TTAATTTGAATTTGATATGC+AGG | + | chr7_1:76710940-76710959 | Msa1039470:intron | 20.0% |
| !! | TAATTTGAATTTGATATGCA+GGG | + | chr7_1:76710941-76710960 | Msa1039470:intron | 20.0% |
| !!! | AAATTACTTTTCAATGTATC+AGG | - | chr7_1:76711509-76711528 | None:intergenic | 20.0% |
| !! | AGCTTAATTATCAACAAAAA+TGG | - | chr7_1:76711575-76711594 | None:intergenic | 20.0% |
| !! | AACTTTGACATTAACAAAAA+TGG | - | chr7_1:76712049-76712068 | None:intergenic | 20.0% |
| !! | GTCAAAGTTTATAACATATA+AGG | + | chr7_1:76712060-76712079 | Msa1039470:intron | 20.0% |
| !! | GTTTATAACATATAAGGATT+TGG | + | chr7_1:76712066-76712085 | Msa1039470:intron | 20.0% |
| !! | TCTTTAATATCAATATACTG+AGG | + | chr7_1:76712176-76712195 | Msa1039470:intron | 20.0% |
| !! | CTTTAATATCAATATACTGA+GGG | + | chr7_1:76712177-76712196 | Msa1039470:intron | 20.0% |
| !! | AAAAAATGTTTATGATTGTG+TGG | + | chr7_1:76712234-76712253 | Msa1039470:intron | 20.0% |
| !!! | TTAGATGTTTTTTATTGATG+GGG | + | chr7_1:76712916-76712935 | Msa1039470:intron | 20.0% |
| !!! | TCATCAATTATAAGAGATTT+TGG | + | chr7_1:76713596-76713615 | Msa1039470:intron | 20.0% |
| !! | AAATTTCCTATGAATTAAGT+TGG | - | chr7_1:76713798-76713817 | None:intergenic | 20.0% |
| !! | ATTTCATAAAAGGGTAAAAT+TGG | - | chr7_1:76713873-76713892 | None:intergenic | 20.0% |
| !! | ATGGGTATAATTTCATAAAA+GGG | - | chr7_1:76713882-76713901 | None:intergenic | 20.0% |
| !! | AATGGGTATAATTTCATAAA+AGG | - | chr7_1:76713883-76713902 | None:intergenic | 20.0% |
| !!! | ATGATCTATCTTATTTTATG+GGG | - | chr7_1:76714054-76714073 | None:intergenic | 20.0% |
| !! | ATGATGAATATACATAAAGT+CGG | + | chr7_1:76714205-76714224 | Msa1039470:intron | 20.0% |
| !! | GAACATGTATAATTTCAAAA+AGG | + | chr7_1:76714530-76714549 | Msa1039470:intron | 20.0% |
| !! | ACATGTATAATTTCAAAAAG+GGG | + | chr7_1:76714532-76714551 | Msa1039470:intron | 20.0% |
| !!! | GTATTTTTTATGATTTGTAG+GGG | + | chr7_1:76714563-76714582 | Msa1039470:intron | 20.0% |
| !! | ATTCAACAAGTATATGAATT+AGG | - | chr7_1:76714624-76714643 | None:intergenic | 20.0% |
| !!! | TTTTAGAGTAGATAGAGATT+AGG | - | chr7_1:76710875-76710894 | None:intergenic | 25.0% |
| ! | AATTTGAATTTGATATGCAG+GGG | + | chr7_1:76710942-76710961 | Msa1039470:intron | 25.0% |
| ! | ATAAGACATAGAAAATGGAA+TGG | - | chr7_1:76711057-76711076 | None:intergenic | 25.0% |
| ! | TTATGTGATTATTGTGATCA+AGG | + | chr7_1:76711131-76711150 | Msa1039470:intron | 25.0% |
| ! | TTAAAATAAAATACACTGCG+AGG | - | chr7_1:76711274-76711293 | None:intergenic | 25.0% |
| ! | ATTCTATCTCCATATGAAAA+TGG | - | chr7_1:76711463-76711482 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTGAATTTAGCCT+TGG | + | chr7_1:76711626-76711645 | Msa1039470:intron | 25.0% |
| ! | CTCATTATTAACTTAGTGTA+TGG | + | chr7_1:76712597-76712616 | Msa1039470:intron | 25.0% |
| ! | TATTAACTTAGTGTATGGTA+TGG | + | chr7_1:76712602-76712621 | Msa1039470:intron | 25.0% |
| !! | ACAGATGAAAATCGATTTAA+AGG | - | chr7_1:76712752-76712771 | None:intergenic | 25.0% |
| !!! | TTTTTTATTGATGGGGTATT+GGG | + | chr7_1:76712923-76712942 | Msa1039470:intron | 25.0% |
| !! | ACTATGATCTAATTTTCTCA+TGG | + | chr7_1:76713271-76713290 | Msa1039470:intron | 25.0% |
| !! | CTATGATCTAATTTTCTCAT+GGG | + | chr7_1:76713272-76713291 | Msa1039470:intron | 25.0% |
| !!! | TGCTCTAAAAACACAAATAT+TGG | - | chr7_1:76713511-76713530 | None:intergenic | 25.0% |
| !!! | TCTATTTTAGATTGTAGACT+TGG | + | chr7_1:76713621-76713640 | Msa1039470:intron | 25.0% |
| !! | TGGTTTGAATGGTATATTTT+TGG | + | chr7_1:76713641-76713660 | Msa1039470:intron | 25.0% |
| ! | GTAAAATTGGCATTTCATTA+TGG | - | chr7_1:76713860-76713879 | None:intergenic | 25.0% |
| !! | TTTTCAATTCCAGAAACATA+TGG | - | chr7_1:76713921-76713940 | None:intergenic | 25.0% |
| !!! | TAGATTTTATTTTTCACGCT+AGG | + | chr7_1:76714074-76714093 | Msa1039470:intron | 25.0% |
| ! | AAATAATAAAGGGGAAAATG+TGG | - | chr7_1:76714260-76714279 | None:intergenic | 25.0% |
| ! | TCTCTATCAATTCATATTGA+CGG | - | chr7_1:76714364-76714383 | None:intergenic | 25.0% |
| !! | TTTGTGTTGTATTTTCAATC+TGG | + | chr7_1:76714453-76714472 | Msa1039470:intron | 25.0% |
| !! | TTCATATACTTGTTGAATTC+AGG | + | chr7_1:76714626-76714645 | Msa1039470:intron | 25.0% |
| !!! | TTGAGATTGTTTGTTATACA+TGG | + | chr7_1:76714912-76714931 | Msa1039470:three_prime_UTR | 25.0% |
| !! | TCAAATTCAAGTTAAAAGCA+AGG | - | chr7_1:76714938-76714957 | None:intergenic | 25.0% |
| !!! | TTTTAGTTATCTACTTAGAG+AGG | + | chr7_1:76714984-76715003 | Msa1039470:three_prime_UTR | 25.0% |
| ! | TTTAGTTATCTACTTAGAGA+GGG | + | chr7_1:76714985-76715004 | Msa1039470:three_prime_UTR | 25.0% |
| !! | GTCTTCTCTGTATTTAGTTT+TGG | + | chr7_1:76710911-76710930 | Msa1039470:intron | 30.0% |
| ! | GATATCATTGGATTTAGGTT+CGG | - | chr7_1:76711011-76711030 | None:intergenic | 30.0% |
| AGGTAGATATCATTGGATTT+AGG | - | chr7_1:76711016-76711035 | None:intergenic | 30.0% | |
| ! | TGGAACTAATTTGTATTCCT+TGG | - | chr7_1:76711234-76711253 | None:intergenic | 30.0% |
| AATTATAGTCCTAGACCTTA+CGG | - | chr7_1:76711407-76711426 | None:intergenic | 30.0% | |
| ! | ACTTTTCAATGTATCAGGAA+TGG | - | chr7_1:76711504-76711523 | None:intergenic | 30.0% |
| ACTTATAATGCGAATACATG+TGG | + | chr7_1:76711597-76711616 | Msa1039470:intron | 30.0% | |
| ! | AATTTTATTCCTGGACCTTA+TGG | - | chr7_1:76711708-76711727 | None:intergenic | 30.0% |
| ! | GTTGGAACTAATTTTATTCC+TGG | - | chr7_1:76711717-76711736 | None:intergenic | 30.0% |
| ATGCATATACTTAGTCCTAA+TGG | - | chr7_1:76711778-76711797 | None:intergenic | 30.0% | |
| ! | AAATGTGTTTTCGATCAACT+TGG | - | chr7_1:76711845-76711864 | None:intergenic | 30.0% |
| GTTGGAACTAATTATATTCC+TGG | - | chr7_1:76711924-76711943 | None:intergenic | 30.0% | |
| GTACAATTGATTATATCCAG+AGG | - | chr7_1:76711962-76711981 | None:intergenic | 30.0% | |
| !! | TAGGTGTTTGTTGTTGATAT+AGG | + | chr7_1:76712097-76712116 | Msa1039470:intron | 30.0% |
| TGGTTAAAAGTAACATCACT+GGG | - | chr7_1:76712133-76712152 | None:intergenic | 30.0% | |
| ATGGTTAAAAGTAACATCAC+TGG | - | chr7_1:76712134-76712153 | None:intergenic | 30.0% | |
| ATCAACTTTGACAGAGAAAT+TGG | - | chr7_1:76712445-76712464 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr7_1:76712672-76712691 | Msa1039470:intron | 30.0% | |
| ACAAAAGAGATCAGTGAATA+TGG | - | chr7_1:76712721-76712740 | None:intergenic | 30.0% | |
| ATTCTACATTGGCAACTTAA+TGG | - | chr7_1:76712803-76712822 | None:intergenic | 30.0% | |
| CAAAGATGCAAATTCTACAT+TGG | - | chr7_1:76712814-76712833 | None:intergenic | 30.0% | |
| CATCTAATTAATTGAGTCGA+GGG | - | chr7_1:76712903-76712922 | None:intergenic | 30.0% | |
| ACATCTAATTAATTGAGTCG+AGG | - | chr7_1:76712904-76712923 | None:intergenic | 30.0% | |
| !!! | GTTTTTTATTGATGGGGTAT+TGG | + | chr7_1:76712922-76712941 | Msa1039470:intron | 30.0% |
| !!! | TTTTTATTGATGGGGTATTG+GGG | + | chr7_1:76712924-76712943 | Msa1039470:intron | 30.0% |
| TGTAAATGCTGTGAATGATT+TGG | + | chr7_1:76713206-76713225 | Msa1039470:intron | 30.0% | |
| TATTAAAAATTGCTGCCCTT+AGG | + | chr7_1:76713376-76713395 | Msa1039470:CDS | 30.0% | |
| ATGAAGCCAACTTAATTCAT+AGG | + | chr7_1:76713789-76713808 | Msa1039470:intron | 30.0% | |
| ! | CATTTCATTATGGTTTGTAG+GGG | - | chr7_1:76713850-76713869 | None:intergenic | 30.0% |
| ! | GCATTTCATTATGGTTTGTA+GGG | - | chr7_1:76713851-76713870 | None:intergenic | 30.0% |
| AAACATATGGTTATGGTGAT+GGG | - | chr7_1:76713908-76713927 | None:intergenic | 30.0% | |
| ATTCCAGAAACATATGGTTA+TGG | - | chr7_1:76713915-76713934 | None:intergenic | 30.0% | |
| ! | ATTAAAGGAGTGTGATTGAT+AGG | - | chr7_1:76713997-76714016 | None:intergenic | 30.0% |
| GAGAAAGGGAAATTGATTAA+AGG | - | chr7_1:76714012-76714031 | None:intergenic | 30.0% | |
| ! | CATTCATGAATTGATAGCAA+AGG | - | chr7_1:76714107-76714126 | None:intergenic | 30.0% |
| TGAAAAATCAAATCCGTTGA+AGG | - | chr7_1:76714165-76714184 | None:intergenic | 30.0% | |
| TGATACGAAGAAGATAACTA+TGG | + | chr7_1:76714313-76714332 | Msa1039470:intron | 30.0% | |
| TGAATTGATAGAGACATTCT+TGG | + | chr7_1:76714370-76714389 | Msa1039470:intron | 30.0% | |
| ! | AAGCCTTATGTAAGATCAAA+GGG | + | chr7_1:76714729-76714748 | Msa1039470:CDS | 30.0% |
| ! | GAAGTATCAAAACTGTAGAA+AGG | - | chr7_1:76714830-76714849 | None:intergenic | 30.0% |
| TTTGATGTCTGCCAATAAAT+TGG | + | chr7_1:76714953-76714972 | Msa1039470:three_prime_UTR | 30.0% | |
| ! | CATTACTCTTTTACCAATCA+TGG | + | chr7_1:76715031-76715050 | Msa1039470:three_prime_UTR | 30.0% |
| !! | AATAACGTGTTGCTTAGATT+TGG | + | chr7_1:76715090-76715109 | Msa1039470:three_prime_UTR | 30.0% |
| TCAATTACCATTGTAGCTCA+GGG | - | chr7_1:76710846-76710865 | None:intergenic | 35.0% | |
| ATCAATTACCATTGTAGCTC+AGG | - | chr7_1:76710847-76710866 | None:intergenic | 35.0% | |
| !!! | TGTTTTGATTTTACGTGACG+AGG | + | chr7_1:76711168-76711187 | Msa1039470:intron | 35.0% |
| !! | ATTTGTATTCCTTGGCCTTA+CGG | - | chr7_1:76711226-76711245 | None:intergenic | 35.0% |
| ATAGCATAAAACACACACCA+AGG | - | chr7_1:76711646-76711665 | None:intergenic | 35.0% | |
| ATACTTAGTCCTAATGGTGA+TGG | - | chr7_1:76711772-76711791 | None:intergenic | 35.0% | |
| AATTATATTCCTGGACCTTC+CGG | - | chr7_1:76711915-76711934 | None:intergenic | 35.0% | |
| ! | TAAGGATTTGGCTTCATGAT+AGG | + | chr7_1:76712078-76712097 | Msa1039470:intron | 35.0% |
| TGTTGTTGATATAGGACTTG+AGG | + | chr7_1:76712105-76712124 | Msa1039470:intron | 35.0% | |
| TCATGTAATCAGCATTAGCA+TGG | - | chr7_1:76712153-76712172 | None:intergenic | 35.0% | |
| TGCAACACATGGAATTAGAA+TGG | - | chr7_1:76712328-76712347 | None:intergenic | 35.0% | |
| TATATCGCTTCCTTGTTAGA+AGG | + | chr7_1:76712356-76712375 | Msa1039470:CDS | 35.0% | |
| AACTTTGACAGAGAAATTGG+AGG | - | chr7_1:76712442-76712461 | None:intergenic | 35.0% | |
| ! | AAAGTTGATCGAGTACATGA+AGG | + | chr7_1:76712456-76712475 | Msa1039470:CDS | 35.0% |
| ! | AAGTTGATCGAGTACATGAA+GGG | + | chr7_1:76712457-76712476 | Msa1039470:CDS | 35.0% |
| ! | TGAGCTTAACTTAGTTGGTA+AGG | + | chr7_1:76712650-76712669 | Msa1039470:intron | 35.0% |
| CATAATATATGCAAGGTCTG+AGG | + | chr7_1:76712679-76712698 | Msa1039470:intron | 35.0% | |
| TCAGTGAATATGGTTGTTTG+AGG | - | chr7_1:76712711-76712730 | None:intergenic | 35.0% | |
| !! | TTGGTAAATGGACTAATGGT+AGG | - | chr7_1:76712775-76712794 | None:intergenic | 35.0% |
| TTAATGGTGTGCTTGGTAAA+TGG | - | chr7_1:76712787-76712806 | None:intergenic | 35.0% | |
| GTTTAGCTGTAGAAAATGAG+AGG | - | chr7_1:76713054-76713073 | None:intergenic | 35.0% | |
| CTACCAAGAACATGATAATC+GGG | - | chr7_1:76713136-76713155 | None:intergenic | 35.0% | |
| GCTACCAAGAACATGATAAT+CGG | - | chr7_1:76713137-76713156 | None:intergenic | 35.0% | |
| !!! | CGAGGATGATGTTTCTTTTT+TGG | - | chr7_1:76713185-76713204 | None:intergenic | 35.0% |
| ATGGGATTATTGTGTTATGC+AGG | + | chr7_1:76713290-76713309 | Msa1039470:intron | 35.0% | |
| GATTATTGTGTTATGCAGGA+CGG | + | chr7_1:76713294-76713313 | Msa1039470:intron | 35.0% | |
| ! | GGGCAGCAATTTTTAATACT+GGG | - | chr7_1:76713374-76713393 | None:intergenic | 35.0% |
| ! | AGGGCAGCAATTTTTAATAC+TGG | - | chr7_1:76713375-76713394 | None:intergenic | 35.0% |
| TAATGACGCAATGGATAGTA+AGG | - | chr7_1:76713546-76713565 | None:intergenic | 35.0% | |
| ATCCATTGCGTCATTATGAT+TGG | + | chr7_1:76713550-76713569 | Msa1039470:intron | 35.0% | |
| TCCATTGCGTCATTATGATT+GGG | + | chr7_1:76713551-76713570 | Msa1039470:intron | 35.0% | |
| ! | GATTGTAGACTTGGTTTGAA+TGG | + | chr7_1:76713630-76713649 | Msa1039470:intron | 35.0% |
| TTGGCTTCATAAAAGCTTGT+TGG | - | chr7_1:76713779-76713798 | None:intergenic | 35.0% | |
| ! | GGCATTTCATTATGGTTTGT+AGG | - | chr7_1:76713852-76713871 | None:intergenic | 35.0% |
| GAAACATATGGTTATGGTGA+TGG | - | chr7_1:76713909-76713928 | None:intergenic | 35.0% | |
| TCACCATAACCATATGTTTC+TGG | + | chr7_1:76713909-76713928 | Msa1039470:intron | 35.0% | |
| ATCTGAAGAAGTGAGAGAAA+GGG | - | chr7_1:76714026-76714045 | None:intergenic | 35.0% | |
| AGAAGATAACTATGGAACTG+AGG | + | chr7_1:76714321-76714340 | Msa1039470:intron | 35.0% | |
| GTATGGGGATCAATTATGAT+AGG | + | chr7_1:76714402-76714421 | Msa1039470:intron | 35.0% | |
| ! | TTTATGATTTGTAGGGGTAG+AGG | + | chr7_1:76714569-76714588 | Msa1039470:intron | 35.0% |
| ATCTTACATAAGGCTTGGAA+TGG | - | chr7_1:76714725-76714744 | None:intergenic | 35.0% | |
| CTTTGATCTTACATAAGGCT+TGG | - | chr7_1:76714730-76714749 | None:intergenic | 35.0% | |
| ! | CAAGCCTTATGTAAGATCAA+AGG | + | chr7_1:76714728-76714747 | Msa1039470:CDS | 35.0% |
| CTTCCCTTTGATCTTACATA+AGG | - | chr7_1:76714735-76714754 | None:intergenic | 35.0% | |
| CTTATGTAAGATCAAAGGGA+AGG | + | chr7_1:76714733-76714752 | Msa1039470:CDS | 35.0% | |
| ! | ACTCTTTTACCAATCATGGT+TGG | + | chr7_1:76715035-76715054 | Msa1039470:three_prime_UTR | 35.0% |
| GAGCTTGAGGTAGATATCAT+TGG | - | chr7_1:76711023-76711042 | None:intergenic | 40.0% | |
| !! | CCATATGAAAATGGACTGAG+AGG | - | chr7_1:76711454-76711473 | None:intergenic | 40.0% |
| ! | CCTCTCAGTCCATTTTCATA+TGG | + | chr7_1:76711451-76711470 | Msa1039470:intron | 40.0% |
| ATAGAATAGCTTCTTCAGCC+AGG | + | chr7_1:76711476-76711495 | Msa1039470:intron | 40.0% | |
| AATGTATCAGGAATGGTTCC+TGG | - | chr7_1:76711497-76711516 | None:intergenic | 40.0% | |
| ATAGCTGATTGTGCAACACA+TGG | - | chr7_1:76712339-76712358 | None:intergenic | 40.0% | |
| GACTGACAGCAATTTCAATG+CGG | + | chr7_1:76712378-76712397 | Msa1039470:CDS | 40.0% | |
| TTGACAGAGAAATTGGAGGT+CGG | - | chr7_1:76712438-76712457 | None:intergenic | 40.0% | |
| AGTTGATCGAGTACATGAAG+GGG | + | chr7_1:76712458-76712477 | Msa1039470:CDS | 40.0% | |
| CCAACTAAGTTAAGCTCACA+AGG | - | chr7_1:76712648-76712667 | None:intergenic | 40.0% | |
| CCTTGTGAGCTTAACTTAGT+TGG | + | chr7_1:76712645-76712664 | Msa1039470:intron | 40.0% | |
| !! | GTGCTTGGTAAATGGACTAA+TGG | - | chr7_1:76712779-76712798 | None:intergenic | 40.0% |
| ACTGACCATTCACATGGTAA+TGG | + | chr7_1:76712983-76713002 | Msa1039470:intron | 40.0% | |
| CTGACCATTCACATGGTAAT+GGG | + | chr7_1:76712984-76713003 | Msa1039470:intron | 40.0% | |
| ! | TGACCATTCACATGGTAATG+GGG | + | chr7_1:76712985-76713004 | Msa1039470:intron | 40.0% |
| TTTCCCCATTACCATGTGAA+TGG | - | chr7_1:76712991-76713010 | None:intergenic | 40.0% | |
| ! | AAAATGAGAGGAAAGTGCAC+AGG | - | chr7_1:76713042-76713061 | None:intergenic | 40.0% |
| CAAGAACATGATAATCGGGT+GGG | - | chr7_1:76713132-76713151 | None:intergenic | 40.0% | |
| CATTCACAGCATTTACAACG+AGG | - | chr7_1:76713203-76713222 | None:intergenic | 40.0% | |
| GTTATGCAGGACGGTAAAAT+TGG | + | chr7_1:76713303-76713322 | Msa1039470:intron | 40.0% | |
| !! | GGTAAAATTGGTGTCGTTGT+GGG | + | chr7_1:76713315-76713334 | Msa1039470:CDS | 40.0% |
| !! | GTAAAATTGGTGTCGTTGTG+GGG | + | chr7_1:76713316-76713335 | Msa1039470:CDS | 40.0% |
| !! | TAAAATTGGTGTCGTTGTGG+GGG | + | chr7_1:76713317-76713336 | Msa1039470:CDS | 40.0% |
| GGCTGTAACAGATGATATCA+GGG | + | chr7_1:76713338-76713357 | Msa1039470:CDS | 40.0% | |
| !! | GGGCAAGTTGATCAAATGTT+AGG | - | chr7_1:76713449-76713468 | None:intergenic | 40.0% |
| ! | TCATACCGTGTTTTGTCCAA+GGG | - | chr7_1:76713481-76713500 | None:intergenic | 40.0% |
| TCCCAATCATAATGACGCAA+TGG | - | chr7_1:76713555-76713574 | None:intergenic | 40.0% | |
| TTCCTGTGAGTAGTTGTGAT+GGG | + | chr7_1:76713728-76713747 | Msa1039470:intron | 40.0% | |
| GGTAAGCTCAACATAACCAA+AGG | - | chr7_1:76713758-76713777 | None:intergenic | 40.0% | |
| ! | ATTATGGTTTGTAGGGGTAG+AGG | - | chr7_1:76713844-76713863 | None:intergenic | 40.0% |
| GATCTGAAGAAGTGAGAGAA+AGG | - | chr7_1:76714027-76714046 | None:intergenic | 40.0% | |
| ! | TCATTTTGCCTCTCCTTCAA+CGG | + | chr7_1:76714149-76714168 | Msa1039470:intron | 40.0% |
| AATCAAATCCGTTGAAGGAG+AGG | - | chr7_1:76714160-76714179 | None:intergenic | 40.0% | |
| ! | ATTCTTGGAGCTTTCTGGTA+TGG | + | chr7_1:76714385-76714404 | Msa1039470:intron | 40.0% |
| ! | TTCTTGGAGCTTTCTGGTAT+GGG | + | chr7_1:76714386-76714405 | Msa1039470:intron | 40.0% |
| AAAGAGGAAACACATGCTGA+TGG | + | chr7_1:76714505-76714524 | Msa1039470:intron | 40.0% | |
| AAGAGGAAACACATGCTGAT+GGG | + | chr7_1:76714506-76714525 | Msa1039470:intron | 40.0% | |
| AGGGAAGCAGTAAAACACTT+TGG | + | chr7_1:76714675-76714694 | Msa1039470:CDS | 40.0% | |
| AAAGGGAAGGAAACAAGAGA+AGG | + | chr7_1:76714746-76714765 | Msa1039470:CDS | 40.0% | |
| AGAGGAAGAGTAGAGGATTT+AGG | + | chr7_1:76714778-76714797 | Msa1039470:CDS | 40.0% | |
| GAGGAAGAGTAGAGGATTTA+GGG | + | chr7_1:76714779-76714798 | Msa1039470:CDS | 40.0% | |
| TTACATTCGCCAACCATGAT+TGG | - | chr7_1:76715047-76715066 | None:intergenic | 40.0% | |
| ! | GGATTTAGGTTCGGTTCGTT+TGG | - | chr7_1:76711002-76711021 | None:intergenic | 45.0% |
| AAATGGAATGGACCTTGACG+AGG | - | chr7_1:76711045-76711064 | None:intergenic | 45.0% | |
| AATGTGATCCCAGCTCTATG+AGG | + | chr7_1:76711200-76711219 | Msa1039470:intron | 45.0% | |
| AATGTGATCCCAGCTCTATG+AGG | + | chr7_1:76711200-76711219 | Msa1039470:intron | 45.0% | |
| AGGCTCAGACAAATGTGTGT+TGG | - | chr7_1:76711434-76711453 | None:intergenic | 45.0% | |
| CCTTATGGTCTCATAGAGCT+GGG | - | chr7_1:76711693-76711712 | None:intergenic | 45.0% | |
| ACCTTATGGTCTCATAGAGC+TGG | - | chr7_1:76711694-76711713 | None:intergenic | 45.0% | |
| TCTATGAGACCATAAGGTCC+AGG | + | chr7_1:76711696-76711715 | Msa1039470:intron | 45.0% | |
| TCTCTCACACCATCACCATT+AGG | + | chr7_1:76711760-76711779 | Msa1039470:intron | 45.0% | |
| AGGCTCAGACAAATGTGTGT+TGG | - | chr7_1:76711434-76711453 | None:intergenic | 45.0% | |
| TGCTGTCAGTCCTTCTAACA+AGG | - | chr7_1:76712369-76712388 | None:intergenic | 45.0% | |
| TGGCAACTTAATGGTGTGCT+TGG | - | chr7_1:76712794-76712813 | None:intergenic | 45.0% | |
| AGACTTGTGTGTATCCTGCT+GGG | - | chr7_1:76712962-76712981 | None:intergenic | 45.0% | |
| AGTCTGACTGACCATTCACA+TGG | + | chr7_1:76712977-76712996 | Msa1039470:intron | 45.0% | |
| !! | ATGGTAATGGGGAAAGTGAG+TGG | + | chr7_1:76712996-76713015 | Msa1039470:intron | 45.0% |
| AAAGTGAGTGGAGCACATTG+TGG | + | chr7_1:76713008-76713027 | Msa1039470:intron | 45.0% | |
| ! | ACATGATAATCGGGTGGGTT+TGG | - | chr7_1:76713127-76713146 | None:intergenic | 45.0% |
| CCAAGAACATGATAATCGGG+TGG | - | chr7_1:76713133-76713152 | None:intergenic | 45.0% | |
| CCACCCGATTATCATGTTCT+TGG | + | chr7_1:76713130-76713149 | Msa1039470:intron | 45.0% | |
| !! | CGGTAAAATTGGTGTCGTTG+TGG | + | chr7_1:76713314-76713333 | Msa1039470:CDS | 45.0% |
| GGGCTGTAACAGATGATATC+AGG | + | chr7_1:76713337-76713356 | Msa1039470:CDS | 45.0% | |
| ACGTGCAAGAATAGAGAAGG+CGG | + | chr7_1:76713413-76713432 | Msa1039470:CDS | 45.0% | |
| ! | CATACCGTGTTTTGTCCAAG+GGG | - | chr7_1:76713480-76713499 | None:intergenic | 45.0% |
| ! | CTCATACCGTGTTTTGTCCA+AGG | - | chr7_1:76713482-76713501 | None:intergenic | 45.0% |
| CTTCCTGTGAGTAGTTGTGA+TGG | + | chr7_1:76713727-76713746 | Msa1039470:intron | 45.0% | |
| ATCCCATCACAACTACTCAC+AGG | - | chr7_1:76713733-76713752 | None:intergenic | 45.0% | |
| ! | AGTTGTGATGGGATAGCCTT+TGG | + | chr7_1:76713739-76713758 | Msa1039470:intron | 45.0% |
| !! | GGTATAAGTGTTGGGGTGTA+GGG | - | chr7_1:76713823-76713842 | None:intergenic | 45.0% |
| !! | AGGTATAAGTGTTGGGGTGT+AGG | - | chr7_1:76713824-76713843 | None:intergenic | 45.0% |
| ! | GGGTAGAGGTATAAGTGTTG+GGG | - | chr7_1:76713830-76713849 | None:intergenic | 45.0% |
| ! | GGGGTAGAGGTATAAGTGTT+GGG | - | chr7_1:76713831-76713850 | None:intergenic | 45.0% |
| ! | AGGGGTAGAGGTATAAGTGT+TGG | - | chr7_1:76713832-76713851 | None:intergenic | 45.0% |
| !! | GGTTATGGTGATGGGTGAAT+GGG | - | chr7_1:76713900-76713919 | None:intergenic | 45.0% |
| !! | TGGTTATGGTGATGGGTGAA+TGG | - | chr7_1:76713901-76713920 | None:intergenic | 45.0% |
| GAGACATTCTTGGAGCTTTC+TGG | + | chr7_1:76714380-76714399 | Msa1039470:intron | 45.0% | |
| ! | TCTTGGAGCTTTCTGGTATG+GGG | + | chr7_1:76714387-76714406 | Msa1039470:intron | 45.0% |
| ! | AGGGGTAGAGGTATAACTGT+TGG | + | chr7_1:76714581-76714600 | Msa1039470:intron | 45.0% |
| ! | GGGGTAGAGGTATAACTGTT+GGG | + | chr7_1:76714582-76714601 | Msa1039470:intron | 45.0% |
| ! | GGGTAGAGGTATAACTGTTG+GGG | + | chr7_1:76714583-76714602 | Msa1039470:intron | 45.0% |
| AGGTATAACTGTTGGGGTGT+AGG | + | chr7_1:76714589-76714608 | Msa1039470:intron | 45.0% | |
| GGTATAACTGTTGGGGTGTA+GGG | + | chr7_1:76714590-76714609 | Msa1039470:intron | 45.0% | |
| TGAATTCAGGTCCTCCTAAG+AGG | + | chr7_1:76714639-76714658 | Msa1039470:intron | 45.0% | |
| TAGCATTCTTTGGGCCTCTT+AGG | - | chr7_1:76714656-76714675 | None:intergenic | 45.0% | |
| TAAGAGGCCCAAAGAATGCT+AGG | + | chr7_1:76714655-76714674 | Msa1039470:CDS | 45.0% | |
| AAGAGGCCCAAAGAATGCTA+GGG | + | chr7_1:76714656-76714675 | Msa1039470:CDS | 45.0% | |
| CTGCTTCCCTAGCATTCTTT+GGG | - | chr7_1:76714665-76714684 | None:intergenic | 45.0% | |
| ACTGCTTCCCTAGCATTCTT+TGG | - | chr7_1:76714666-76714685 | None:intergenic | 45.0% | |
| TCTACTCTTCCTCTTTCCTC+TGG | - | chr7_1:76714772-76714791 | None:intergenic | 45.0% | |
| AGAGGAAAGAGGAAGAGTAG+AGG | + | chr7_1:76714771-76714790 | Msa1039470:CDS | 45.0% | |
| !! | TAAATAAATAAATACAAAAA+CGG | - | chr7_1:76711090-76711109 | None:intergenic | 5.0% |
| !!! | ATTTTATAAAAATAATAAAG+GGG | - | chr7_1:76714269-76714288 | None:intergenic | 5.0% |
| ! | ATTGTAGCTCAGGGTTCTGG+AGG | - | chr7_1:76710837-76710856 | None:intergenic | 50.0% |
| TCCAGAACCCTGAGCTACAA+TGG | + | chr7_1:76710836-76710855 | Msa1039470:exon | 50.0% | |
| ACCATTGTAGCTCAGGGTTC+TGG | - | chr7_1:76710840-76710859 | None:intergenic | 50.0% | |
| AGGGGATCGATCTCAAAGCT+GGG | + | chr7_1:76710960-76710979 | Msa1039470:intron | 50.0% | |
| AGGCTCAGACAAACGTGTGT+TGG | - | chr7_1:76711254-76711273 | None:intergenic | 50.0% | |
| TCTATGAGGCCGTAAGGTCT+AGG | + | chr7_1:76711395-76711414 | Msa1039470:intron | 50.0% | |
| CCCAGCTCTATGAGACCATA+AGG | + | chr7_1:76711690-76711709 | Msa1039470:intron | 50.0% | |
| AGGCTCAGACAAGTGTGTGT+TGG | - | chr7_1:76711735-76711754 | None:intergenic | 50.0% | |
| ! | TGATGGTGTGAGAGATGCAG+AGG | - | chr7_1:76711755-76711774 | None:intergenic | 50.0% |
| TGATCCCAGCTCTATGAGAC+CGG | + | chr7_1:76711686-76711705 | Msa1039470:intron | 50.0% | |
| CACACATTTGTCTGAGCCTC+TGG | + | chr7_1:76711435-76711454 | Msa1039470:intron | 50.0% | |
| CAAGCGCTTGTTCATGAGCA+AGG | + | chr7_1:76712408-76712427 | Msa1039470:CDS | 50.0% | |
| GATCGAGTACATGAAGGGGA+AGG | + | chr7_1:76712462-76712481 | Msa1039470:CDS | 50.0% | |
| CAGACTTGTGTGTATCCTGC+TGG | - | chr7_1:76712963-76712982 | None:intergenic | 50.0% | |
| TGCCCTTAGGTTCACAGAGA+CGG | + | chr7_1:76713389-76713408 | Msa1039470:CDS | 50.0% | |
| TGCCGTCTCTGTGAACCTAA+GGG | - | chr7_1:76713394-76713413 | None:intergenic | 50.0% | |
| GGCACGTGCAAGAATAGAGA+AGG | + | chr7_1:76713410-76713429 | Msa1039470:CDS | 50.0% | |
| CGTGCAAGAATAGAGAAGGC+GGG | + | chr7_1:76713414-76713433 | Msa1039470:CDS | 50.0% | |
| ! | TTGTCCAAGGGGAGCTCTAA+GGG | - | chr7_1:76713469-76713488 | None:intergenic | 50.0% |
| TTTGTCCAAGGGGAGCTCTA+AGG | - | chr7_1:76713470-76713489 | None:intergenic | 50.0% | |
| AGCTCCCCTTGGACAAAACA+CGG | + | chr7_1:76713473-76713492 | Msa1039470:CDS | 50.0% | |
| CATTCTTTGGGCCTCTTAGG+AGG | - | chr7_1:76714653-76714672 | None:intergenic | 50.0% | |
| AAACACTTTGGTCGTGCTCC+TGG | + | chr7_1:76714687-76714706 | Msa1039470:CDS | 50.0% | |
| TAAGGCTTGGAATGGCTGTG+TGG | - | chr7_1:76714717-76714736 | None:intergenic | 50.0% | |
| AGGAAACAAGAGAAGGCCAG+AGG | + | chr7_1:76714753-76714772 | Msa1039470:CDS | 50.0% | |
| AAGAGAAGGCCAGAGGAAAG+AGG | + | chr7_1:76714760-76714779 | Msa1039470:CDS | 50.0% | |
| CAGGGGATCGATCTCAAAGC+TGG | + | chr7_1:76710959-76710978 | Msa1039470:intron | 55.0% | |
| GGGGATCGATCTCAAAGCTG+GGG | + | chr7_1:76710961-76710980 | Msa1039470:intron | 55.0% | |
| GGGATCGATCTCAAAGCTGG+GGG | + | chr7_1:76710962-76710981 | Msa1039470:CDS | 55.0% | |
| CTACCTCAAGCTCCTCGTCA+AGG | + | chr7_1:76711030-76711049 | Msa1039470:CDS | 55.0% | |
| CCTTACGGCCTCATAGAGCT+GGG | - | chr7_1:76711211-76711230 | None:intergenic | 55.0% | |
| TCTATGAGGCCGTAAGGCCA+AGG | + | chr7_1:76711214-76711233 | Msa1039470:intron | 55.0% | |
| CCTTACGGCCTCATAGAGCT+GGG | - | chr7_1:76711211-76711230 | None:intergenic | 55.0% | |
| ACCTTACGGCCTCATAGAGC+TGG | - | chr7_1:76711393-76711412 | None:intergenic | 55.0% | |
| CCTTCCGGTCTCATAGAGCT+GGG | - | chr7_1:76711900-76711919 | None:intergenic | 55.0% | |
| ACCTTCCGGTCTCATAGAGC+TGG | - | chr7_1:76711901-76711920 | None:intergenic | 55.0% | |
| TCTATGAGACCGGAAGGTCC+AGG | + | chr7_1:76711903-76711922 | Msa1039470:intron | 55.0% | |
| GTGCCGTCTCTGTGAACCTA+AGG | - | chr7_1:76713395-76713414 | None:intergenic | 55.0% | |
| GCAAGAATAGAGAAGGCGGG+TGG | + | chr7_1:76713417-76713436 | Msa1039470:CDS | 55.0% | |
| GGACCTTGACGAGGAGCTTG+AGG | - | chr7_1:76711036-76711055 | None:intergenic | 60.0% | |
| CCCAGCTCTATGAGGCCGTA+AGG | + | chr7_1:76711208-76711227 | Msa1039470:intron | 60.0% | |
| GCCTTACGGCCTCATAGAGC+TGG | - | chr7_1:76711212-76711231 | None:intergenic | 60.0% | |
| CCCAGCTCTATGAGGCCGTA+AGG | + | chr7_1:76711208-76711227 | Msa1039470:intron | 60.0% | |
| CCCAGCTCTATGAGACCGGA+AGG | + | chr7_1:76711897-76711916 | Msa1039470:intron | 60.0% | |
| !! | GATGGGGTATTGGGGAGCTG+TGG | + | chr7_1:76712932-76712951 | Msa1039470:intron | 60.0% |
| CTTGCCCTTAGAGCTCCCCT+TGG | + | chr7_1:76713462-76713481 | Msa1039470:CDS | 60.0% | |
| GAATGGCTGTGTGGCACACC+AGG | - | chr7_1:76714708-76714727 | None:intergenic | 60.0% | |
| GGAGCTGTGGTGAACCCAGC+AGG | + | chr7_1:76712945-76712964 | Msa1039470:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 76710788 | 76715119 | 76710788 | ID=Msa1039470;Name=Msa1039470 |
| chr7_1 | mRNA | 76710788 | 76715119 | 76710788 | ID=Msa1039470-mRNA-1;Parent=Msa1039470;Name=Msa1039470-mRNA-1;_AED=0.21;_eAED=0.21;_QI=67|1|1|1|0.5|1|5|313|187 |
| chr7_1 | exon | 76710788 | 76710857 | 76710788 | ID=Msa1039470-mRNA-1:exon:19951;Parent=Msa1039470-mRNA-1 |
| chr7_1 | exon | 76710962 | 76711051 | 76710962 | ID=Msa1039470-mRNA-1:exon:19952;Parent=Msa1039470-mRNA-1 |
| chr7_1 | exon | 76712355 | 76712483 | 76712355 | ID=Msa1039470-mRNA-1:exon:19953;Parent=Msa1039470-mRNA-1 |
| chr7_1 | exon | 76713312 | 76713494 | 76713312 | ID=Msa1039470-mRNA-1:exon:19954;Parent=Msa1039470-mRNA-1 |
| chr7_1 | exon | 76714648 | 76715119 | 76714648 | ID=Msa1039470-mRNA-1:exon:19955;Parent=Msa1039470-mRNA-1 |
| chr7_1 | five_prime_UTR | 76710788 | 76710854 | 76710788 | ID=Msa1039470-mRNA-1:five_prime_utr;Parent=Msa1039470-mRNA-1 |
| chr7_1 | CDS | 76710855 | 76710857 | 76710855 | ID=Msa1039470-mRNA-1:cds;Parent=Msa1039470-mRNA-1 |
| chr7_1 | CDS | 76710962 | 76711051 | 76710962 | ID=Msa1039470-mRNA-1:cds;Parent=Msa1039470-mRNA-1 |
| chr7_1 | CDS | 76712355 | 76712483 | 76712355 | ID=Msa1039470-mRNA-1:cds;Parent=Msa1039470-mRNA-1 |
| chr7_1 | CDS | 76713312 | 76713494 | 76713312 | ID=Msa1039470-mRNA-1:cds;Parent=Msa1039470-mRNA-1 |
| chr7_1 | CDS | 76714648 | 76714806 | 76714648 | ID=Msa1039470-mRNA-1:cds;Parent=Msa1039470-mRNA-1 |
| chr7_1 | three_prime_UTR | 76714807 | 76715119 | 76714807 | ID=Msa1039470-mRNA-1:three_prime_utr;Parent=Msa1039470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
