Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133540 | XP_003592267.1 | 100.000 | 111 | 0 | 0 | 1 | 111 | 1 | 111 | 6.15e-71 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133540 | sp|Q9M352|RL362_ARATH | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.90e-57 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133540 | G7IAL7 | 100.000 | 111 | 0 | 0 | 1 | 111 | 1 | 111 | 2.94e-71 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0133540 | 0.900696 | 5.659425e-78 | -8.615850e-47 |
| Msa0002790 | Msa0133540 | 0.919661 | 3.407499e-87 | -8.615850e-47 |
| Msa0003780 | Msa0133540 | 0.843927 | 1.036899e-58 | -8.615850e-47 |
| Msa0022970 | Msa0133540 | 0.886227 | 4.108746e-72 | -8.615850e-47 |
| Msa0032780 | Msa0133540 | 0.835762 | 1.389505e-56 | -8.615850e-47 |
| Msa0032810 | Msa0133540 | 0.848238 | 6.961630e-60 | -8.615850e-47 |
| Msa0038090 | Msa0133540 | 0.822141 | 2.776644e-53 | -8.615850e-47 |
| Msa0040690 | Msa0133540 | 0.829248 | 5.724886e-55 | -8.615850e-47 |
| Msa0042280 | Msa0133540 | 0.819128 | 1.366364e-52 | -8.615850e-47 |
| Msa0045730 | Msa0133540 | 0.893464 | 6.136400e-75 | -8.615850e-47 |
| Msa0047160 | Msa0133540 | 0.821473 | 3.963554e-53 | -8.615850e-47 |
| Msa0048180 | Msa0133540 | 0.839225 | 1.799329e-57 | -8.615850e-47 |
| Msa0055180 | Msa0133540 | 0.801034 | 1.089451e-48 | -8.615850e-47 |
| Msa0074030 | Msa0133540 | 0.859077 | 5.307941e-63 | -8.615850e-47 |
| Msa0086750 | Msa0133540 | 0.888798 | 4.290018e-73 | -8.615850e-47 |
| Msa0091880 | Msa0133540 | 0.818648 | 1.756953e-52 | -8.615850e-47 |
| Msa0094470 | Msa0133540 | 0.815122 | 1.086720e-51 | -8.615850e-47 |
| Msa0116130 | Msa0133540 | 0.894714 | 1.900823e-75 | -8.615850e-47 |
| Msa0116670 | Msa0133540 | 0.905721 | 3.182359e-80 | -8.615850e-47 |
| Msa0118710 | Msa0133540 | 0.881033 | 3.358578e-70 | -8.615850e-47 |
| Msa0128860 | Msa0133540 | 0.835462 | 1.655047e-56 | -8.615850e-47 |
| Msa0133540 | Msa0146340 | 0.878098 | 3.694623e-69 | -8.615850e-47 |
| Msa0133540 | Msa0163760 | 0.851081 | 1.119758e-60 | -8.615850e-47 |
| Msa0133540 | Msa0167480 | 0.830506 | 2.826277e-55 | -8.615850e-47 |
| Msa0133540 | Msa0172900 | 0.831856 | 1.316566e-55 | -8.615850e-47 |
| Msa0133540 | Msa0172930 | 0.819677 | 1.024209e-52 | -8.615850e-47 |
| Msa0133540 | Msa0173530 | 0.903745 | 2.525180e-79 | -8.615850e-47 |
| Msa0133540 | Msa0174730 | 0.833997 | 3.865591e-56 | -8.615850e-47 |
| Msa0133540 | Msa0180020 | 0.808817 | 2.569918e-50 | -8.615850e-47 |
| Msa0133540 | Msa0181490 | 0.995691 | 7.199435e-219 | -8.615850e-47 |
| Msa0133540 | Msa0187930 | 0.827003 | 1.988699e-54 | -8.615850e-47 |
| Msa0133540 | Msa0189700 | 0.810836 | 9.455791e-51 | -8.615850e-47 |
| Msa0133540 | Msa0194540 | 0.819654 | 1.036769e-52 | -8.615850e-47 |
| Msa0133540 | Msa0202020 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
| Msa0133540 | Msa0210360 | 0.851884 | 6.634256e-61 | -8.615850e-47 |
| Msa0133540 | Msa0218830 | 0.855674 | 5.384894e-62 | -8.615850e-47 |
| Msa0133540 | Msa0219120 | 0.860101 | 2.612050e-63 | -8.615850e-47 |
| Msa0133540 | Msa0221030 | 0.837191 | 6.011569e-57 | -8.615850e-47 |
| Msa0133540 | Msa0222730 | 0.843553 | 1.305676e-58 | -8.615850e-47 |
| Msa0133540 | Msa0224560 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa0133540 | Msa0229150 | 0.802227 | 6.199015e-49 | -8.615850e-47 |
| Msa0133540 | Msa0230490 | 0.886515 | 3.197395e-72 | -8.615850e-47 |
| Msa0133540 | Msa0230520 | 0.853486 | 2.315332e-61 | -8.615850e-47 |
| Msa0133540 | Msa0231100 | 0.840635 | 7.723708e-58 | -8.615850e-47 |
| Msa0133540 | Msa0232010 | 0.805278 | 1.442101e-49 | -8.615850e-47 |
| Msa0133540 | Msa0232080 | 0.808778 | 2.620320e-50 | -8.615850e-47 |
| Msa0133540 | Msa0244780 | 0.830840 | 2.341766e-55 | -8.615850e-47 |
| Msa0133540 | Msa0257450 | 0.805573 | 1.250874e-49 | -8.615850e-47 |
| Msa0133540 | Msa0258850 | 0.862720 | 4.148224e-64 | -8.615850e-47 |
| Msa0133540 | Msa0262480 | 0.820947 | 5.240198e-53 | -8.615850e-47 |
| Msa0133540 | Msa0264010 | 0.864914 | 8.625425e-65 | -8.615850e-47 |
| Msa0133540 | Msa0268130 | 0.816235 | 6.139594e-52 | -8.615850e-47 |
| Msa0133540 | Msa0269180 | 0.831099 | 2.022123e-55 | -8.615850e-47 |
| Msa0133540 | Msa0289580 | 0.890338 | 1.078535e-73 | -8.615850e-47 |
| Msa0133540 | Msa0289610 | 0.897828 | 9.627763e-77 | -8.615850e-47 |
| Msa0133540 | Msa0297830 | 0.829986 | 3.786627e-55 | -8.615850e-47 |
| Msa0133540 | Msa0298200 | 0.857069 | 2.097494e-62 | -8.615850e-47 |
| Msa0133540 | Msa0298990 | 0.820491 | 6.668572e-53 | -8.615850e-47 |
| Msa0133540 | Msa0300350 | 0.818112 | 2.323502e-52 | -8.615850e-47 |
| Msa0133540 | Msa0301220 | 0.807158 | 5.793979e-50 | -8.615850e-47 |
| Msa0133540 | Msa0306690 | 0.988603 | 1.135294e-174 | -8.615850e-47 |
| Msa0133540 | Msa0313100 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0133540 | Msa0317910 | 0.821680 | 3.549792e-53 | -8.615850e-47 |
| Msa0133540 | Msa0321640 | 0.811313 | 7.450665e-51 | -8.615850e-47 |
| Msa0133540 | Msa0327300 | 0.905720 | 3.186609e-80 | -8.615850e-47 |
| Msa0133540 | Msa0327330 | 0.892209 | 1.959257e-74 | -8.615850e-47 |
| Msa0133540 | Msa0335840 | 0.831078 | 2.046754e-55 | -8.615850e-47 |
| Msa0133540 | Msa0336010 | 0.848754 | 5.009160e-60 | -8.615850e-47 |
| Msa0133540 | Msa0337670 | 0.815638 | 8.343023e-52 | -8.615850e-47 |
| Msa0133540 | Msa0348830 | 0.891592 | 3.450229e-74 | -8.615850e-47 |
| Msa0133540 | Msa0355680 | 0.807858 | 4.116474e-50 | -8.615850e-47 |
| Msa0133540 | Msa0443390 | 0.870770 | 1.135455e-66 | -8.615850e-47 |
| Msa0133540 | Msa0481850 | 0.861331 | 1.105771e-63 | -8.615850e-47 |
| Msa0133540 | Msa0483110 | 0.866339 | 3.065405e-65 | -8.615850e-47 |
| Msa0133540 | Msa0526540 | 0.858940 | 5.834825e-63 | -8.615850e-47 |
| Msa0133540 | Msa0527150 | 0.819830 | 9.451719e-53 | -8.615850e-47 |
| Msa0133540 | Msa0534750 | 0.844947 | 5.513091e-59 | -8.615850e-47 |
| Msa0133540 | Msa0571920 | 0.825964 | 3.516257e-54 | -8.615850e-47 |
| Msa0133540 | Msa0576940 | 0.861865 | 7.595097e-64 | -8.615850e-47 |
| Msa0133540 | Msa0584260 | 0.812246 | 4.669902e-51 | -8.615850e-47 |
| Msa0133540 | Msa0586420 | 0.829371 | 5.342976e-55 | -8.615850e-47 |
| Msa0133540 | Msa0588360 | 0.807632 | 4.597854e-50 | -8.615850e-47 |
| Msa0133540 | Msa0588630 | -0.820721 | 5.904710e-53 | -8.615850e-47 |
| Msa0133540 | Msa0590940 | 0.802918 | 4.466828e-49 | -8.615850e-47 |
| Msa0133540 | Msa0603320 | 0.817735 | 2.826067e-52 | -8.615850e-47 |
| Msa0133540 | Msa0615440 | 0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa0133540 | Msa0615580 | 0.852992 | 3.206361e-61 | -8.615850e-47 |
| Msa0133540 | Msa0617540 | 0.824356 | 8.437460e-54 | -8.615850e-47 |
| Msa0133540 | Msa0620890 | 0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0133540 | Msa0622750 | 0.888522 | 5.481494e-73 | -8.615850e-47 |
| Msa0133540 | Msa0623200 | 0.894139 | 3.265683e-75 | -8.615850e-47 |
| Msa0133540 | Msa0664560 | 0.816515 | 5.315438e-52 | -8.615850e-47 |
| Msa0133540 | Msa0666230 | 0.857079 | 2.083188e-62 | -8.615850e-47 |
| Msa0133540 | Msa0684160 | 0.816661 | 4.929674e-52 | -8.615850e-47 |
| Msa0133540 | Msa0688850 | 0.807888 | 4.056654e-50 | -8.615850e-47 |
| Msa0133540 | Msa0698490 | 0.809249 | 2.077359e-50 | -8.615850e-47 |
| Msa0133540 | Msa0698660 | 0.807588 | 4.698018e-50 | -8.615850e-47 |
| Msa0133540 | Msa0698780 | 0.838976 | 2.087998e-57 | -8.615850e-47 |
| Msa0133540 | Msa0705800 | 0.813704 | 2.237325e-51 | -8.615850e-47 |
| Msa0133540 | Msa0712610 | 0.869617 | 2.706947e-66 | -8.615850e-47 |
| Msa0133540 | Msa0717380 | 0.808814 | 2.573624e-50 | -8.615850e-47 |
| Msa0133540 | Msa0719420 | 0.813466 | 2.523860e-51 | -8.615850e-47 |
| Msa0133540 | Msa0729200 | 0.869561 | 2.824510e-66 | -8.615850e-47 |
| Msa0133540 | Msa0738100 | 0.839729 | 1.331156e-57 | -8.615850e-47 |
| Msa0133540 | Msa0766080 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
| Msa0133540 | Msa0769590 | 0.873563 | 1.334464e-67 | -8.615850e-47 |
| Msa0133540 | Msa0780490 | 0.878609 | 2.446207e-69 | -8.615850e-47 |
| Msa0133540 | Msa0781080 | 0.863319 | 2.710518e-64 | -8.615850e-47 |
| Msa0133540 | Msa0785130 | 0.860356 | 2.186292e-63 | -8.615850e-47 |
| Msa0133540 | Msa0789680 | 0.812934 | 3.301607e-51 | -8.615850e-47 |
| Msa0133540 | Msa0806880 | 0.888087 | 8.053978e-73 | -8.615850e-47 |
| Msa0133540 | Msa0817540 | 0.861810 | 7.897577e-64 | -8.615850e-47 |
| Msa0133540 | Msa0827380 | 0.863652 | 2.135831e-64 | -8.615850e-47 |
| Msa0133540 | Msa0844220 | -0.824142 | 9.473795e-54 | -8.615850e-47 |
| Msa0133540 | Msa0867060 | 0.813474 | 2.512810e-51 | -8.615850e-47 |
| Msa0133540 | Msa0876170 | 0.868472 | 6.364601e-66 | -8.615850e-47 |
| Msa0133540 | Msa0881290 | 0.810332 | 1.214951e-50 | -8.615850e-47 |
| Msa0133540 | Msa0888810 | 0.806976 | 6.333285e-50 | -8.615850e-47 |
| Msa0133540 | Msa0930490 | 0.805798 | 1.121711e-49 | -8.615850e-47 |
| Msa0133540 | Msa0945480 | 0.854589 | 1.112773e-61 | -8.615850e-47 |
| Msa0133540 | Msa0953310 | 0.819787 | 9.668505e-53 | -8.615850e-47 |
| Msa0133540 | Msa1006840 | 0.814095 | 1.833971e-51 | -8.615850e-47 |
| Msa0133540 | Msa1010310 | 0.839666 | 1.382337e-57 | -8.615850e-47 |
| Msa0133540 | Msa1012740 | 0.809908 | 1.499761e-50 | -8.615850e-47 |
| Msa0133540 | Msa1019240 | 0.872680 | 2.639740e-67 | -8.615850e-47 |
| Msa0133540 | Msa1019260 | 0.864736 | 9.813594e-65 | -8.615850e-47 |
| Msa0133540 | Msa1021120 | 0.800974 | 1.120225e-48 | -8.615850e-47 |
| Msa0133540 | Msa1037290 | 0.800717 | 1.264057e-48 | -8.615850e-47 |
| Msa0133540 | Msa1039470 | 0.838735 | 2.409686e-57 | -8.615850e-47 |
| Msa0133540 | Msa1039520 | 0.824912 | 6.242760e-54 | -8.615850e-47 |
| Msa0133540 | Msa1040160 | 0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa0133540 | Msa1043690 | 0.850049 | 2.182697e-60 | -8.615850e-47 |
| Msa0133540 | Msa1072710 | 0.857199 | 1.920503e-62 | -8.615850e-47 |
| Msa0133540 | Msa1078870 | 0.832646 | 8.395038e-56 | -8.615850e-47 |
| Msa0133540 | Msa1078980 | 0.814522 | 1.475876e-51 | -8.615850e-47 |
| Msa0133540 | Msa1080350 | 0.874481 | 6.529053e-68 | -8.615850e-47 |
| Msa0133540 | Msa1088490 | 0.878675 | 2.317388e-69 | -8.615850e-47 |
| Msa0133540 | Msa1094380 | 0.815616 | 8.440593e-52 | -8.615850e-47 |
| Msa0133540 | Msa1096900 | 0.803057 | 4.179286e-49 | -8.615850e-47 |
| Msa0133540 | Msa1100710 | 0.811954 | 5.407789e-51 | -8.615850e-47 |
| Msa0133540 | Msa1104140 | 0.853613 | 2.127976e-61 | -8.615850e-47 |
| Msa0133540 | Msa1104210 | 0.871396 | 7.058367e-67 | -8.615850e-47 |
| Msa0133540 | Msa1125860 | 0.877766 | 4.829139e-69 | -8.615850e-47 |
| Msa0133540 | Msa1126060 | 0.874988 | 4.391430e-68 | -8.615850e-47 |
| Msa0133540 | Msa1126520 | 0.816168 | 6.353623e-52 | -8.615850e-47 |
| Msa0133540 | Msa1126830 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0133540 | Msa1135890 | 0.818349 | 2.053793e-52 | -8.615850e-47 |
| Msa0133540 | Msa1165780 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
| Msa0133540 | Msa1166860 | 0.818137 | 2.293154e-52 | -8.615850e-47 |
| Msa0133540 | Msa1166870 | 0.858068 | 1.061722e-62 | -8.615850e-47 |
| Msa0133540 | Msa1167540 | 0.856222 | 3.723341e-62 | -8.615850e-47 |
| Msa0133540 | Msa1167550 | 0.832408 | 9.616931e-56 | -8.615850e-47 |
| Msa0133540 | Msa1169180 | 0.813385 | 2.629143e-51 | -8.615850e-47 |
| Msa0133540 | Msa1186980 | 0.809991 | 1.439221e-50 | -8.615850e-47 |
| Msa0133540 | Msa1195300 | 0.831919 | 1.270271e-55 | -8.615850e-47 |
| Msa0133540 | Msa1208020 | 0.816369 | 5.730401e-52 | -8.615850e-47 |
| Msa0133540 | Msa1215820 | 0.898133 | 7.150687e-77 | -8.615850e-47 |
| Msa0133540 | Msa1257510 | 0.806004 | 1.015107e-49 | -8.615850e-47 |
| Msa0133540 | Msa1260530 | 0.809647 | 1.706538e-50 | -8.615850e-47 |
| Msa0133540 | Msa1262890 | 0.804342 | 2.261879e-49 | -8.615850e-47 |
| Msa0133540 | Msa1265630 | 0.819576 | 1.080477e-52 | -8.615850e-47 |
| Msa0133540 | Msa1266060 | 0.808953 | 2.403854e-50 | -8.615850e-47 |
| Msa0133540 | Msa1273340 | 0.824165 | 9.358367e-54 | -8.615850e-47 |
| Msa0133540 | Msa1295150 | 0.801973 | 6.992671e-49 | -8.615850e-47 |
| Msa0133540 | Msa1299590 | 0.844563 | 6.997266e-59 | -8.615850e-47 |
| Msa0133540 | Msa1305050 | 0.833462 | 5.259953e-56 | -8.615850e-47 |
| Msa0133540 | Msa1331710 | 0.816338 | 5.821901e-52 | -8.615850e-47 |
| Msa0133540 | Msa1332250 | 0.836325 | 9.999406e-57 | -8.615850e-47 |
| Msa0133540 | Msa1338190 | 0.839514 | 1.514384e-57 | -8.615850e-47 |
| Msa0133540 | Msa1343260 | 0.827323 | 1.666595e-54 | -8.615850e-47 |
| Msa0133540 | Msa1349570 | 0.863771 | 1.962424e-64 | -8.615850e-47 |
| Msa0133540 | Msa1356790 | 0.872165 | 3.920956e-67 | -8.615850e-47 |
| Msa0133540 | Msa1362790 | 0.860069 | 2.669853e-63 | -8.615850e-47 |
| Msa0133540 | Msa1363330 | 0.858326 | 8.894810e-63 | -8.615850e-47 |
| Msa0133540 | Msa1366180 | 0.884666 | 1.577316e-71 | -8.615850e-47 |
| Msa0133540 | Msa1369190 | 0.857123 | 2.021724e-62 | -8.615850e-47 |
| Msa0133540 | Msa1374120 | 0.825679 | 4.110910e-54 | -8.615850e-47 |
| Msa0133540 | Msa1379760 | 0.843437 | 1.402132e-58 | -8.615850e-47 |
| Msa0133540 | Msa1386600 | 0.859324 | 4.476194e-63 | -8.615850e-47 |
| Msa0133540 | Msa1387410 | 0.855261 | 7.105059e-62 | -8.615850e-47 |
| Msa0133540 | Msa1392590 | 0.801989 | 6.938702e-49 | -8.615850e-47 |
| Msa0133540 | Msa1394290 | 0.800299 | 1.538337e-48 | -8.615850e-47 |
| Msa0133540 | Msa1399530 | 0.819951 | 8.870083e-53 | -8.615850e-47 |
| Msa0133540 | Msa1406080 | 0.861069 | 1.328750e-63 | -8.615850e-47 |
| Msa0133540 | Msa1407070 | 0.811861 | 5.664408e-51 | -8.615850e-47 |
| Msa0133540 | Msa1410440 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
| Msa0133540 | Msa1413500 | 0.890387 | 1.031729e-73 | -8.615850e-47 |
| Msa0133540 | Msa1426120 | 0.840311 | 9.386320e-58 | -8.615850e-47 |
| Msa0133540 | Msa1426370 | 0.861571 | 9.346479e-64 | -8.615850e-47 |
| Msa0133540 | Msa1426490 | 0.888824 | 4.190230e-73 | -8.615850e-47 |
| Msa0133540 | Msa1427560 | 0.861637 | 8.917758e-64 | -8.615850e-47 |
| Msa0133540 | Msa1433310 | 0.821903 | 3.152650e-53 | -8.615850e-47 |
| Msa0133540 | Msa1448690 | 0.818476 | 1.921590e-52 | -8.615850e-47 |
| Msa0133540 | Msa1450280 | 0.818838 | 1.590593e-52 | -8.615850e-47 |
| Msa0133540 | Msa1455950 | 0.805910 | 1.062357e-49 | -8.615850e-47 |
| Msa0133540 | Msa1456050 | 0.812860 | 3.427970e-51 | -8.615850e-47 |
| Msa0133540 | Msa1465260 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133540 | MtrunA17_Chr1g0203071 | 100.000 | 111 | 0 | 0 | 1 | 111 | 1 | 111 | 5.66e-75 | 217 |
| Msa0133540 | MtrunA17_Chr6g0470561 | 96.396 | 111 | 4 | 0 | 1 | 111 | 1 | 111 | 2.67e-72 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133540 | AT3G53740.4 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.94e-58 | 176 |
| Msa0133540 | AT3G53740.2 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.94e-58 | 176 |
| Msa0133540 | AT3G53740.3 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.94e-58 | 176 |
| Msa0133540 | AT2G37600.1 | 82.692 | 104 | 18 | 0 | 8 | 111 | 8 | 111 | 2.14e-56 | 171 |
| Msa0133540 | AT2G37600.2 | 82.692 | 104 | 18 | 0 | 8 | 111 | 8 | 111 | 2.14e-56 | 171 |
| Msa0133540 | AT5G02450.1 | 83.019 | 106 | 17 | 1 | 7 | 111 | 3 | 108 | 8.39e-56 | 169 |
| Msa0133540 | AT3G53740.1 | 72.072 | 111 | 22 | 1 | 1 | 111 | 1 | 102 | 3.17e-49 | 152 |
Find 62 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGCACTCTCTCTGGTGTT+AGG | 0.277881 | 1_3:+64822160 | Msa0133540:five_prime_UTR |
| AAACCAGTACTTGGTTGTTT+AGG | 0.306770 | 1_3:-64822320 | None:intergenic |
| CTTCTTCTTTGCACGTTTGT+GGG | 0.313110 | 1_3:-64822989 | None:intergenic |
| TCTTCTTCTTTGCACGTTTG+TGG | 0.365751 | 1_3:-64822990 | None:intergenic |
| AAAGGGAATTCTAAGTGATT+AGG | 0.392156 | 1_3:+64823490 | Msa0133540:three_prime_UTR |
| TTTATTTGTGACAGGAGAAA+TGG | 0.397262 | 1_3:+64822295 | Msa0133540:intron |
| AAAAGACAAGAGGGCACTTA+AGG | 0.398330 | 1_3:+64822945 | Msa0133540:CDS |
| CCGCACTCTCTCTGGTGTTA+GGG | 0.410246 | 1_3:+64822161 | Msa0133540:five_prime_UTR |
| CCATTCCACCGCACTCTCTC+TGG | 0.423239 | 1_3:+64822153 | Msa0133540:five_prime_UTR |
| TCCACGTCCTTCAGCTCGCA+AGG | 0.427898 | 1_3:+64822391 | Msa0133540:CDS |
| TGCAGGGCTGGTGGTGGAGC+AGG | 0.430321 | 1_3:+64823160 | Msa0133540:intron |
| AGCAGGAGATAAGAAGAAAT+AGG | 0.434078 | 1_3:+64823177 | Msa0133540:CDS |
| CATCGTCACAAAGAAGGAAT+TGG | 0.434230 | 1_3:+64822367 | Msa0133540:CDS |
| CATTAAACGTTATATGGTCT+AGG | 0.435620 | 1_3:+64823444 | Msa0133540:three_prime_UTR |
| AGTAAGCTTATAATTCCCTT+TGG | 0.437738 | 1_3:-64823567 | None:intergenic |
| GAAGTGAAGAAGCTAACCTT+AGG | 0.445240 | 1_3:-64822131 | None:intergenic |
| CCAAGTACTGGTTTGTTCGT+TGG | 0.458873 | 1_3:+64822329 | Msa0133540:CDS |
| AAGGTTGCAAAGAGAAAGCT+TGG | 0.461674 | 1_3:+64822964 | Msa0133540:CDS |
| CCAACGAACAAACCAGTACT+TGG | 0.464574 | 1_3:-64822329 | None:intergenic |
| TAATCACTTAGAATTCCCTT+TGG | 0.471460 | 1_3:-64823488 | None:intergenic |
| ATGAAAACATGGTCATCATA+AGG | 0.471890 | 1_3:-64823424 | None:intergenic |
| CCAGAGAGAGTGCGGTGGAA+TGG | 0.480153 | 1_3:-64822153 | None:intergenic |
| AACCTCATTAGAGAGGTTGC+TGG | 0.487721 | 1_3:+64822877 | Msa0133540:CDS |
| ATCACTGAGTTGCTCAAGGT+TGG | 0.503868 | 1_3:+64822922 | Msa0133540:CDS |
| TCAATGTGCAGGGCTGGTGG+TGG | 0.508415 | 1_3:+64823154 | Msa0133540:intron |
| AGGAGATGTCTAATGTCCTC+AGG | 0.510350 | 1_3:+64823016 | Msa0133540:CDS |
| ACCTCATTAGAGAGGTTGCT+GGG | 0.511316 | 1_3:+64822878 | Msa0133540:CDS |
| CCCTTGCGAGCTGAAGGACG+TGG | 0.511446 | 1_3:-64822392 | None:intergenic |
| TCTGAGATCACCGTCACTAC+AGG | 0.512556 | 1_3:+64822186 | Msa0133540:five_prime_UTR |
| TTTGTTATGGCTTCACATGA+TGG | 0.517974 | 1_3:+64823211 | Msa0133540:three_prime_UTR |
| GGAATTCTAAGTGATTAGGA+AGG | 0.521373 | 1_3:+64823494 | Msa0133540:three_prime_UTR |
| CCACGTCCTTCAGCTCGCAA+GGG | 0.521414 | 1_3:+64822392 | Msa0133540:CDS |
| TTGTTATGGCTTCACATGAT+GGG | 0.522554 | 1_3:+64823212 | Msa0133540:three_prime_UTR |
| AGGCCACATCGTCACAAAGA+AGG | 0.551215 | 1_3:+64822361 | Msa0133540:CDS |
| GCTCCTAAACAACCAAGTAC+TGG | 0.551611 | 1_3:+64822317 | Msa0133540:CDS |
| CACGTCCTTCAGCTCGCAAG+GGG | 0.561496 | 1_3:+64822393 | Msa0133540:CDS |
| TGATACAGTAGTTTACCAAA+GGG | 0.574844 | 1_3:+64823473 | Msa0133540:three_prime_UTR |
| ATTCCTTCTTTGTGACGATG+TGG | 0.577252 | 1_3:-64822364 | None:intergenic |
| TTGATACAGTAGTTTACCAA+AGG | 0.579967 | 1_3:+64823472 | Msa0133540:three_prime_UTR |
| TTGTTCGTTGGATTGAACAA+AGG | 0.583526 | 1_3:+64822341 | Msa0133540:CDS |
| TCAGTGATACGCTTCTCGTA+AGG | 0.584616 | 1_3:-64822907 | None:intergenic |
| AAGTGAAGAAGCTAACCTTA+GGG | 0.585753 | 1_3:-64822130 | None:intergenic |
| TGATACAGTAGTTAACCAAA+GGG | 0.586023 | 1_3:+64823552 | Msa0133540:three_prime_UTR |
| TTGATACAGTAGTTAACCAA+AGG | 0.592386 | 1_3:+64823551 | Msa0133540:three_prime_UTR |
| ACCCAGCAACCTCTCTAATG+AGG | 0.601885 | 1_3:-64822879 | None:intergenic |
| TGTGAGGAACCTCATTAGAG+AGG | 0.602916 | 1_3:+64822870 | Msa0133540:CDS |
| TCGTTCAGAAAACAAGCAAG+AGG | 0.606732 | 1_3:+64822839 | Msa0133540:intron |
| CCCTAACACCAGAGAGAGTG+CGG | 0.614155 | 1_3:-64822161 | None:intergenic |
| ACGTGCAAAGAAGAAGAGAG+AGG | 0.618868 | 1_3:+64822996 | Msa0133540:CDS |
| GCAAGAGGGTGCACTTTGTG+AGG | 0.622900 | 1_3:+64822854 | Msa0133540:CDS |
| GAAATGAATACCTGTAGTGA+CGG | 0.626819 | 1_3:-64822196 | None:intergenic |
| CTAATGTCCTCAGGAAGATG+AGG | 0.627117 | 1_3:+64823025 | Msa0133540:CDS |
| CAAGGTTGGAAAAGACAAGA+GGG | 0.628294 | 1_3:+64822936 | Msa0133540:CDS |
| GCGTATCACTGAGTTGCTCA+AGG | 0.629950 | 1_3:+64822918 | Msa0133540:CDS |
| CGTTCAGAAAACAAGCAAGA+GGG | 0.632672 | 1_3:+64822840 | Msa0133540:intron |
| GAATTCTAAGTGATTAGGAA+GGG | 0.639972 | 1_3:+64823495 | Msa0133540:three_prime_UTR |
| AGATACTCGAAAGAACCCTA+AGG | 0.648690 | 1_3:+64822115 | Msa0133540:five_prime_UTR |
| TATAACGTTTAATGAAAACA+TGG | 0.659063 | 1_3:-64823435 | None:intergenic |
| TCAAGGTTGGAAAAGACAAG+AGG | 0.663036 | 1_3:+64822935 | Msa0133540:CDS |
| GAACAAACCTCATCTTCCTG+AGG | 0.694769 | 1_3:-64823032 | None:intergenic |
| ACGTCCTTCAGCTCGCAAGG+GGG | 0.706112 | 1_3:+64822394 | Msa0133540:CDS |
| TAACACCAGAGAGAGTGCGG+TGG | 0.731080 | 1_3:-64822158 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAATCTAACATAAAA+TGG | - | chr1_3:64822465-64822484 | None:intergenic | 10.0% |
| !!! | ATTTTATGTTAGATTTAAAT+TGG | + | chr1_3:64822464-64822483 | Msa0133540:intron | 10.0% |
| !! | AATTTAAATCTAACATAAAA+TGG | - | chr1_3:64822465-64822484 | None:intergenic | 10.0% |
| !!! | ATTTTATGTTAGATTTAAAT+TGG | + | chr1_3:64822464-64822483 | Msa0133540:intron | 10.0% |
| !!! | TAGATATCAAAAGATTTTAT+GGG | + | chr1_3:64823375-64823394 | Msa0133540:three_prime_UTR | 15.0% |
| !!! | TTTATGGGTTTATATTTTTA+AGG | + | chr1_3:64823390-64823409 | Msa0133540:three_prime_UTR | 15.0% |
| !!! | TAGATATCAAAAGATTTTAT+GGG | + | chr1_3:64823375-64823394 | Msa0133540:three_prime_UTR | 15.0% |
| !!! | TTTATGGGTTTATATTTTTA+AGG | + | chr1_3:64823390-64823409 | Msa0133540:three_prime_UTR | 15.0% |
| !!! | AAATTGGAATTATTAGCTTA+AGG | + | chr1_3:64822480-64822499 | Msa0133540:intron | 20.0% |
| !! | ACGAATAAAAACAATCTTTA+GGG | - | chr1_3:64822823-64822842 | None:intergenic | 20.0% |
| !! | AACGAATAAAAACAATCTTT+AGG | - | chr1_3:64822824-64822843 | None:intergenic | 20.0% |
| !!! | TTTGTTATTATTGTTATGCT+TGG | + | chr1_3:64823062-64823081 | Msa0133540:intron | 20.0% |
| !!! | CTAGATATCAAAAGATTTTA+TGG | + | chr1_3:64823374-64823393 | Msa0133540:three_prime_UTR | 20.0% |
| !! | TATAACGTTTAATGAAAACA+TGG | - | chr1_3:64823438-64823457 | None:intergenic | 20.0% |
| !!! | TGTTTTCATTAAACGTTATA+TGG | + | chr1_3:64823438-64823457 | Msa0133540:three_prime_UTR | 20.0% |
| !!! | AAATTGGAATTATTAGCTTA+AGG | + | chr1_3:64822480-64822499 | Msa0133540:intron | 20.0% |
| !! | ACGAATAAAAACAATCTTTA+GGG | - | chr1_3:64822823-64822842 | None:intergenic | 20.0% |
| !! | AACGAATAAAAACAATCTTT+AGG | - | chr1_3:64822824-64822843 | None:intergenic | 20.0% |
| !!! | TTTGTTATTATTGTTATGCT+TGG | + | chr1_3:64823062-64823081 | Msa0133540:intron | 20.0% |
| !!! | CTAGATATCAAAAGATTTTA+TGG | + | chr1_3:64823374-64823393 | Msa0133540:three_prime_UTR | 20.0% |
| !! | TATAACGTTTAATGAAAACA+TGG | - | chr1_3:64823438-64823457 | None:intergenic | 20.0% |
| !!! | TGTTTTCATTAAACGTTATA+TGG | + | chr1_3:64823438-64823457 | Msa0133540:three_prime_UTR | 20.0% |
| ! | TTTAACTCTGCAATAAAAAG+CGG | + | chr1_3:64822085-64822104 | Msa0133540:five_prime_UTR | 25.0% |
| ! | TTTGTTTGTTTATTTGTGAC+AGG | + | chr1_3:64822287-64822306 | Msa0133540:intron | 25.0% |
| ! | ATTAATTCATAAGCTTGTCA+AGG | + | chr1_3:64822613-64822632 | Msa0133540:intron | 25.0% |
| ! | TTAAGAAAAAACTGCTTATG+AGG | + | chr1_3:64822640-64822659 | Msa0133540:intron | 25.0% |
| ! | TTATGAGGATGATATTTATG+AGG | + | chr1_3:64822655-64822674 | Msa0133540:intron | 25.0% |
| ! | AATAGAAGGAGAAATAATGT+TGG | + | chr1_3:64822705-64822724 | Msa0133540:intron | 25.0% |
| ! | ATAGAAGGAGAAATAATGTT+GGG | + | chr1_3:64822706-64822725 | Msa0133540:intron | 25.0% |
| ! | CATTATTTCATTCATTCCTA+TGG | - | chr1_3:64822754-64822773 | None:intergenic | 25.0% |
| ! | CGAATAAAAACAATCTTTAG+GGG | - | chr1_3:64822822-64822841 | None:intergenic | 25.0% |
| ! | TTATTGTTATGCTTGGTATT+TGG | + | chr1_3:64823069-64823088 | Msa0133540:intron | 25.0% |
| ! | GTTATTATGATAAACATTCC+CGG | + | chr1_3:64823091-64823110 | Msa0133540:intron | 25.0% |
| !! | TTTAGATATTTTCAATGTGC+AGG | + | chr1_3:64823143-64823162 | Msa0133540:intron | 25.0% |
| !! | TTAGATATTTTCAATGTGCA+GGG | + | chr1_3:64823144-64823163 | Msa0133540:intron | 25.0% |
| !!! | GGTTTTGTTTACTTTTGTTA+TGG | + | chr1_3:64823198-64823217 | Msa0133540:exon | 25.0% |
| ! | TTTAACTCTGCAATAAAAAG+CGG | + | chr1_3:64822085-64822104 | Msa0133540:five_prime_UTR | 25.0% |
| ! | TTTGTTTGTTTATTTGTGAC+AGG | + | chr1_3:64822287-64822306 | Msa0133540:intron | 25.0% |
| ! | ATTAATTCATAAGCTTGTCA+AGG | + | chr1_3:64822613-64822632 | Msa0133540:intron | 25.0% |
| ! | TTAAGAAAAAACTGCTTATG+AGG | + | chr1_3:64822640-64822659 | Msa0133540:intron | 25.0% |
| ! | TTATGAGGATGATATTTATG+AGG | + | chr1_3:64822655-64822674 | Msa0133540:intron | 25.0% |
| ! | AATAGAAGGAGAAATAATGT+TGG | + | chr1_3:64822705-64822724 | Msa0133540:intron | 25.0% |
| ! | ATAGAAGGAGAAATAATGTT+GGG | + | chr1_3:64822706-64822725 | Msa0133540:intron | 25.0% |
| ! | CATTATTTCATTCATTCCTA+TGG | - | chr1_3:64822754-64822773 | None:intergenic | 25.0% |
| ! | CGAATAAAAACAATCTTTAG+GGG | - | chr1_3:64822822-64822841 | None:intergenic | 25.0% |
| ! | TTATTGTTATGCTTGGTATT+TGG | + | chr1_3:64823069-64823088 | Msa0133540:intron | 25.0% |
| ! | GTTATTATGATAAACATTCC+CGG | + | chr1_3:64823091-64823110 | Msa0133540:intron | 25.0% |
| !! | TTTAGATATTTTCAATGTGC+AGG | + | chr1_3:64823143-64823162 | Msa0133540:intron | 25.0% |
| !! | TTAGATATTTTCAATGTGCA+GGG | + | chr1_3:64823144-64823163 | Msa0133540:intron | 25.0% |
| !!! | GGTTTTGTTTACTTTTGTTA+TGG | + | chr1_3:64823198-64823217 | Msa0133540:exon | 25.0% |
| TTTATTTGTGACAGGAGAAA+TGG | + | chr1_3:64822295-64822314 | Msa0133540:intron | 30.0% | |
| TATGCTCGTACTTTGTATTA+AGG | + | chr1_3:64822529-64822548 | Msa0133540:intron | 30.0% | |
| CTTTGTATTAAGGATCTGTT+TGG | + | chr1_3:64822539-64822558 | Msa0133540:intron | 30.0% | |
| TATTAAGGATCTGTTTGGAT+TGG | + | chr1_3:64822544-64822563 | Msa0133540:intron | 30.0% | |
| ! | ATGAGGATGACATTTTTGTT+AGG | + | chr1_3:64822672-64822691 | Msa0133540:intron | 30.0% |
| ! | TGAGGATGACATTTTTGTTA+GGG | + | chr1_3:64822673-64822692 | Msa0133540:intron | 30.0% |
| TAGGGAGATATATGAATAGA+AGG | + | chr1_3:64822691-64822710 | Msa0133540:intron | 30.0% | |
| TATTTCATTCATTCCTATGG+TGG | - | chr1_3:64822751-64822770 | None:intergenic | 30.0% | |
| ! | TTTTTGCATTCTGTTCATCT+TGG | + | chr1_3:64822790-64822809 | Msa0133540:intron | 30.0% |
| ATGAAAACATGGTCATCATA+AGG | - | chr1_3:64823427-64823446 | None:intergenic | 30.0% | |
| CATTAAACGTTATATGGTCT+AGG | + | chr1_3:64823444-64823463 | Msa0133540:three_prime_UTR | 30.0% | |
| TTGATACAGTAGTTTACCAA+AGG | + | chr1_3:64823472-64823491 | Msa0133540:three_prime_UTR | 30.0% | |
| TGATACAGTAGTTTACCAAA+GGG | + | chr1_3:64823473-64823492 | Msa0133540:three_prime_UTR | 30.0% | |
| TAATCACTTAGAATTCCCTT+TGG | - | chr1_3:64823491-64823510 | None:intergenic | 30.0% | |
| AAAGGGAATTCTAAGTGATT+AGG | + | chr1_3:64823490-64823509 | Msa0133540:three_prime_UTR | 30.0% | |
| GAATTCTAAGTGATTAGGAA+GGG | + | chr1_3:64823495-64823514 | Msa0133540:three_prime_UTR | 30.0% | |
| TTGATACAGTAGTTAACCAA+AGG | + | chr1_3:64823551-64823570 | Msa0133540:three_prime_UTR | 30.0% | |
| TGATACAGTAGTTAACCAAA+GGG | + | chr1_3:64823552-64823571 | Msa0133540:three_prime_UTR | 30.0% | |
| TTTATTTGTGACAGGAGAAA+TGG | + | chr1_3:64822295-64822314 | Msa0133540:intron | 30.0% | |
| TATGCTCGTACTTTGTATTA+AGG | + | chr1_3:64822529-64822548 | Msa0133540:intron | 30.0% | |
| CTTTGTATTAAGGATCTGTT+TGG | + | chr1_3:64822539-64822558 | Msa0133540:intron | 30.0% | |
| TATTAAGGATCTGTTTGGAT+TGG | + | chr1_3:64822544-64822563 | Msa0133540:intron | 30.0% | |
| ! | ATGAGGATGACATTTTTGTT+AGG | + | chr1_3:64822672-64822691 | Msa0133540:intron | 30.0% |
| ! | TGAGGATGACATTTTTGTTA+GGG | + | chr1_3:64822673-64822692 | Msa0133540:intron | 30.0% |
| TAGGGAGATATATGAATAGA+AGG | + | chr1_3:64822691-64822710 | Msa0133540:intron | 30.0% | |
| TATTTCATTCATTCCTATGG+TGG | - | chr1_3:64822751-64822770 | None:intergenic | 30.0% | |
| ! | TTTTTGCATTCTGTTCATCT+TGG | + | chr1_3:64822790-64822809 | Msa0133540:intron | 30.0% |
| ATGAAAACATGGTCATCATA+AGG | - | chr1_3:64823427-64823446 | None:intergenic | 30.0% | |
| CATTAAACGTTATATGGTCT+AGG | + | chr1_3:64823444-64823463 | Msa0133540:three_prime_UTR | 30.0% | |
| TTGATACAGTAGTTTACCAA+AGG | + | chr1_3:64823472-64823491 | Msa0133540:three_prime_UTR | 30.0% | |
| TGATACAGTAGTTTACCAAA+GGG | + | chr1_3:64823473-64823492 | Msa0133540:three_prime_UTR | 30.0% | |
| TAATCACTTAGAATTCCCTT+TGG | - | chr1_3:64823491-64823510 | None:intergenic | 30.0% | |
| AAAGGGAATTCTAAGTGATT+AGG | + | chr1_3:64823490-64823509 | Msa0133540:three_prime_UTR | 30.0% | |
| GAATTCTAAGTGATTAGGAA+GGG | + | chr1_3:64823495-64823514 | Msa0133540:three_prime_UTR | 30.0% | |
| TTGATACAGTAGTTAACCAA+AGG | + | chr1_3:64823551-64823570 | Msa0133540:three_prime_UTR | 30.0% | |
| TGATACAGTAGTTAACCAAA+GGG | + | chr1_3:64823552-64823571 | Msa0133540:three_prime_UTR | 30.0% | |
| AAGTGAAGAAGCTAACCTTA+GGG | - | chr1_3:64822133-64822152 | None:intergenic | 35.0% | |
| GAAATGAATACCTGTAGTGA+CGG | - | chr1_3:64822199-64822218 | None:intergenic | 35.0% | |
| ATTGAGATAATCGAAGAACG+AGG | - | chr1_3:64822226-64822245 | None:intergenic | 35.0% | |
| AAACCAGTACTTGGTTGTTT+AGG | - | chr1_3:64822323-64822342 | None:intergenic | 35.0% | |
| TTGTTCGTTGGATTGAACAA+AGG | + | chr1_3:64822341-64822360 | Msa0133540:CDS | 35.0% | |
| ATACACTATCTATCCACCAT+AGG | + | chr1_3:64822735-64822754 | Msa0133540:intron | 35.0% | |
| CAATAACAAGAACATGTTCC+GGG | - | chr1_3:64823112-64823131 | None:intergenic | 35.0% | |
| CCAATAACAAGAACATGTTC+CGG | - | chr1_3:64823113-64823132 | None:intergenic | 35.0% | |
| AGCAGGAGATAAGAAGAAAT+AGG | + | chr1_3:64823177-64823196 | Msa0133540:CDS | 35.0% | |
| ! | TTTGTTATGGCTTCACATGA+TGG | + | chr1_3:64823211-64823230 | Msa0133540:three_prime_UTR | 35.0% |
| TTGTTATGGCTTCACATGAT+GGG | + | chr1_3:64823212-64823231 | Msa0133540:three_prime_UTR | 35.0% | |
| GGAATTCTAAGTGATTAGGA+AGG | + | chr1_3:64823494-64823513 | Msa0133540:three_prime_UTR | 35.0% | |
| AAGTGAAGAAGCTAACCTTA+GGG | - | chr1_3:64822133-64822152 | None:intergenic | 35.0% | |
| GAAATGAATACCTGTAGTGA+CGG | - | chr1_3:64822199-64822218 | None:intergenic | 35.0% | |
| ATTGAGATAATCGAAGAACG+AGG | - | chr1_3:64822226-64822245 | None:intergenic | 35.0% | |
| AAACCAGTACTTGGTTGTTT+AGG | - | chr1_3:64822323-64822342 | None:intergenic | 35.0% | |
| TTGTTCGTTGGATTGAACAA+AGG | + | chr1_3:64822341-64822360 | Msa0133540:CDS | 35.0% | |
| ATACACTATCTATCCACCAT+AGG | + | chr1_3:64822735-64822754 | Msa0133540:intron | 35.0% | |
| CAATAACAAGAACATGTTCC+GGG | - | chr1_3:64823112-64823131 | None:intergenic | 35.0% | |
| CCAATAACAAGAACATGTTC+CGG | - | chr1_3:64823113-64823132 | None:intergenic | 35.0% | |
| AGCAGGAGATAAGAAGAAAT+AGG | + | chr1_3:64823177-64823196 | Msa0133540:CDS | 35.0% | |
| ! | TTTGTTATGGCTTCACATGA+TGG | + | chr1_3:64823211-64823230 | Msa0133540:three_prime_UTR | 35.0% |
| TTGTTATGGCTTCACATGAT+GGG | + | chr1_3:64823212-64823231 | Msa0133540:three_prime_UTR | 35.0% | |
| GGAATTCTAAGTGATTAGGA+AGG | + | chr1_3:64823494-64823513 | Msa0133540:three_prime_UTR | 35.0% | |
| AGATACTCGAAAGAACCCTA+AGG | + | chr1_3:64822115-64822134 | Msa0133540:five_prime_UTR | 40.0% | |
| GAAGTGAAGAAGCTAACCTT+AGG | - | chr1_3:64822134-64822153 | None:intergenic | 40.0% | |
| ATTCCTTCTTTGTGACGATG+TGG | - | chr1_3:64822367-64822386 | None:intergenic | 40.0% | |
| CATCGTCACAAAGAAGGAAT+TGG | + | chr1_3:64822367-64822386 | Msa0133540:CDS | 40.0% | |
| CATTCTGTTCATCTTGGATG+TGG | + | chr1_3:64822796-64822815 | Msa0133540:intron | 40.0% | |
| TCGTTCAGAAAACAAGCAAG+AGG | + | chr1_3:64822839-64822858 | Msa0133540:intron | 40.0% | |
| CGTTCAGAAAACAAGCAAGA+GGG | + | chr1_3:64822840-64822859 | Msa0133540:intron | 40.0% | |
| TCAAGGTTGGAAAAGACAAG+AGG | + | chr1_3:64822935-64822954 | Msa0133540:CDS | 40.0% | |
| CAAGGTTGGAAAAGACAAGA+GGG | + | chr1_3:64822936-64822955 | Msa0133540:CDS | 40.0% | |
| !! | AAAAGACAAGAGGGCACTTA+AGG | + | chr1_3:64822945-64822964 | Msa0133540:CDS | 40.0% |
| AAGGTTGCAAAGAGAAAGCT+TGG | + | chr1_3:64822964-64822983 | Msa0133540:CDS | 40.0% | |
| CTTCTTCTTTGCACGTTTGT+GGG | - | chr1_3:64822992-64823011 | None:intergenic | 40.0% | |
| TCTTCTTCTTTGCACGTTTG+TGG | - | chr1_3:64822993-64823012 | None:intergenic | 40.0% | |
| ! | CCGGAACATGTTCTTGTTAT+TGG | + | chr1_3:64823110-64823129 | Msa0133540:intron | 40.0% |
| ! | ATATTTTCAATGTGCAGGGC+TGG | + | chr1_3:64823148-64823167 | Msa0133540:intron | 40.0% |
| AGATACTCGAAAGAACCCTA+AGG | + | chr1_3:64822115-64822134 | Msa0133540:five_prime_UTR | 40.0% | |
| GAAGTGAAGAAGCTAACCTT+AGG | - | chr1_3:64822134-64822153 | None:intergenic | 40.0% | |
| ATTCCTTCTTTGTGACGATG+TGG | - | chr1_3:64822367-64822386 | None:intergenic | 40.0% | |
| CATCGTCACAAAGAAGGAAT+TGG | + | chr1_3:64822367-64822386 | Msa0133540:CDS | 40.0% | |
| CATTCTGTTCATCTTGGATG+TGG | + | chr1_3:64822796-64822815 | Msa0133540:intron | 40.0% | |
| TCGTTCAGAAAACAAGCAAG+AGG | + | chr1_3:64822839-64822858 | Msa0133540:intron | 40.0% | |
| CGTTCAGAAAACAAGCAAGA+GGG | + | chr1_3:64822840-64822859 | Msa0133540:intron | 40.0% | |
| TCAAGGTTGGAAAAGACAAG+AGG | + | chr1_3:64822935-64822954 | Msa0133540:CDS | 40.0% | |
| CAAGGTTGGAAAAGACAAGA+GGG | + | chr1_3:64822936-64822955 | Msa0133540:CDS | 40.0% | |
| !! | AAAAGACAAGAGGGCACTTA+AGG | + | chr1_3:64822945-64822964 | Msa0133540:CDS | 40.0% |
| AAGGTTGCAAAGAGAAAGCT+TGG | + | chr1_3:64822964-64822983 | Msa0133540:CDS | 40.0% | |
| CTTCTTCTTTGCACGTTTGT+GGG | - | chr1_3:64822992-64823011 | None:intergenic | 40.0% | |
| TCTTCTTCTTTGCACGTTTG+TGG | - | chr1_3:64822993-64823012 | None:intergenic | 40.0% | |
| ! | CCGGAACATGTTCTTGTTAT+TGG | + | chr1_3:64823110-64823129 | Msa0133540:intron | 40.0% |
| ! | ATATTTTCAATGTGCAGGGC+TGG | + | chr1_3:64823148-64823167 | Msa0133540:intron | 40.0% |
| GCTCCTAAACAACCAAGTAC+TGG | + | chr1_3:64822317-64822336 | Msa0133540:CDS | 45.0% | |
| CCAACGAACAAACCAGTACT+TGG | - | chr1_3:64822332-64822351 | None:intergenic | 45.0% | |
| !! | CCAAGTACTGGTTTGTTCGT+TGG | + | chr1_3:64822329-64822348 | Msa0133540:CDS | 45.0% |
| TGTGAGGAACCTCATTAGAG+AGG | + | chr1_3:64822870-64822889 | Msa0133540:CDS | 45.0% | |
| AACCTCATTAGAGAGGTTGC+TGG | + | chr1_3:64822877-64822896 | Msa0133540:CDS | 45.0% | |
| ACCTCATTAGAGAGGTTGCT+GGG | + | chr1_3:64822878-64822897 | Msa0133540:CDS | 45.0% | |
| TCAGTGATACGCTTCTCGTA+AGG | - | chr1_3:64822910-64822929 | None:intergenic | 45.0% | |
| ATCACTGAGTTGCTCAAGGT+TGG | + | chr1_3:64822922-64822941 | Msa0133540:CDS | 45.0% | |
| ACGTGCAAAGAAGAAGAGAG+AGG | + | chr1_3:64822996-64823015 | Msa0133540:CDS | 45.0% | |
| AGGAGATGTCTAATGTCCTC+AGG | + | chr1_3:64823016-64823035 | Msa0133540:CDS | 45.0% | |
| CTAATGTCCTCAGGAAGATG+AGG | + | chr1_3:64823025-64823044 | Msa0133540:CDS | 45.0% | |
| GAACAAACCTCATCTTCCTG+AGG | - | chr1_3:64823035-64823054 | None:intergenic | 45.0% | |
| GCTCCTAAACAACCAAGTAC+TGG | + | chr1_3:64822317-64822336 | Msa0133540:CDS | 45.0% | |
| CCAACGAACAAACCAGTACT+TGG | - | chr1_3:64822332-64822351 | None:intergenic | 45.0% | |
| !! | CCAAGTACTGGTTTGTTCGT+TGG | + | chr1_3:64822329-64822348 | Msa0133540:CDS | 45.0% |
| TGTGAGGAACCTCATTAGAG+AGG | + | chr1_3:64822870-64822889 | Msa0133540:CDS | 45.0% | |
| AACCTCATTAGAGAGGTTGC+TGG | + | chr1_3:64822877-64822896 | Msa0133540:CDS | 45.0% | |
| ACCTCATTAGAGAGGTTGCT+GGG | + | chr1_3:64822878-64822897 | Msa0133540:CDS | 45.0% | |
| TCAGTGATACGCTTCTCGTA+AGG | - | chr1_3:64822910-64822929 | None:intergenic | 45.0% | |
| ATCACTGAGTTGCTCAAGGT+TGG | + | chr1_3:64822922-64822941 | Msa0133540:CDS | 45.0% | |
| ACGTGCAAAGAAGAAGAGAG+AGG | + | chr1_3:64822996-64823015 | Msa0133540:CDS | 45.0% | |
| AGGAGATGTCTAATGTCCTC+AGG | + | chr1_3:64823016-64823035 | Msa0133540:CDS | 45.0% | |
| CTAATGTCCTCAGGAAGATG+AGG | + | chr1_3:64823025-64823044 | Msa0133540:CDS | 45.0% | |
| GAACAAACCTCATCTTCCTG+AGG | - | chr1_3:64823035-64823054 | None:intergenic | 45.0% | |
| ! | TCTGAGATCACCGTCACTAC+AGG | + | chr1_3:64822186-64822205 | Msa0133540:five_prime_UTR | 50.0% |
| AGGCCACATCGTCACAAAGA+AGG | + | chr1_3:64822361-64822380 | Msa0133540:CDS | 50.0% | |
| ACCCAGCAACCTCTCTAATG+AGG | - | chr1_3:64822882-64822901 | None:intergenic | 50.0% | |
| GCGTATCACTGAGTTGCTCA+AGG | + | chr1_3:64822918-64822937 | Msa0133540:CDS | 50.0% | |
| ! | TTTTCAATGTGCAGGGCTGG+TGG | + | chr1_3:64823151-64823170 | Msa0133540:intron | 50.0% |
| ! | TCTGAGATCACCGTCACTAC+AGG | + | chr1_3:64822186-64822205 | Msa0133540:five_prime_UTR | 50.0% |
| AGGCCACATCGTCACAAAGA+AGG | + | chr1_3:64822361-64822380 | Msa0133540:CDS | 50.0% | |
| ACCCAGCAACCTCTCTAATG+AGG | - | chr1_3:64822882-64822901 | None:intergenic | 50.0% | |
| GCGTATCACTGAGTTGCTCA+AGG | + | chr1_3:64822918-64822937 | Msa0133540:CDS | 50.0% | |
| ! | TTTTCAATGTGCAGGGCTGG+TGG | + | chr1_3:64823151-64823170 | Msa0133540:intron | 50.0% |
| ! | TAACACCAGAGAGAGTGCGG+TGG | - | chr1_3:64822161-64822180 | None:intergenic | 55.0% |
| ACCGCACTCTCTCTGGTGTT+AGG | + | chr1_3:64822160-64822179 | Msa0133540:five_prime_UTR | 55.0% | |
| CCCTAACACCAGAGAGAGTG+CGG | - | chr1_3:64822164-64822183 | None:intergenic | 55.0% | |
| ! | CCGCACTCTCTCTGGTGTTA+GGG | + | chr1_3:64822161-64822180 | Msa0133540:five_prime_UTR | 55.0% |
| ! | GCAAGAGGGTGCACTTTGTG+AGG | + | chr1_3:64822854-64822873 | Msa0133540:CDS | 55.0% |
| ! | TAACACCAGAGAGAGTGCGG+TGG | - | chr1_3:64822161-64822180 | None:intergenic | 55.0% |
| ACCGCACTCTCTCTGGTGTT+AGG | + | chr1_3:64822160-64822179 | Msa0133540:five_prime_UTR | 55.0% | |
| CCCTAACACCAGAGAGAGTG+CGG | - | chr1_3:64822164-64822183 | None:intergenic | 55.0% | |
| ! | CCGCACTCTCTCTGGTGTTA+GGG | + | chr1_3:64822161-64822180 | Msa0133540:five_prime_UTR | 55.0% |
| ! | GCAAGAGGGTGCACTTTGTG+AGG | + | chr1_3:64822854-64822873 | Msa0133540:CDS | 55.0% |
| ! | CCAGAGAGAGTGCGGTGGAA+TGG | - | chr1_3:64822156-64822175 | None:intergenic | 60.0% |
| CCATTCCACCGCACTCTCTC+TGG | + | chr1_3:64822153-64822172 | Msa0133540:five_prime_UTR | 60.0% | |
| TCCACGTCCTTCAGCTCGCA+AGG | + | chr1_3:64822391-64822410 | Msa0133540:CDS | 60.0% | |
| CCACGTCCTTCAGCTCGCAA+GGG | + | chr1_3:64822392-64822411 | Msa0133540:CDS | 60.0% | |
| CACGTCCTTCAGCTCGCAAG+GGG | + | chr1_3:64822393-64822412 | Msa0133540:CDS | 60.0% | |
| ACGTCCTTCAGCTCGCAAGG+GGG | + | chr1_3:64822394-64822413 | Msa0133540:CDS | 60.0% | |
| ! | TCAATGTGCAGGGCTGGTGG+TGG | + | chr1_3:64823154-64823173 | Msa0133540:intron | 60.0% |
| ! | CCAGAGAGAGTGCGGTGGAA+TGG | - | chr1_3:64822156-64822175 | None:intergenic | 60.0% |
| CCATTCCACCGCACTCTCTC+TGG | + | chr1_3:64822153-64822172 | Msa0133540:five_prime_UTR | 60.0% | |
| TCCACGTCCTTCAGCTCGCA+AGG | + | chr1_3:64822391-64822410 | Msa0133540:CDS | 60.0% | |
| CCACGTCCTTCAGCTCGCAA+GGG | + | chr1_3:64822392-64822411 | Msa0133540:CDS | 60.0% | |
| CACGTCCTTCAGCTCGCAAG+GGG | + | chr1_3:64822393-64822412 | Msa0133540:CDS | 60.0% | |
| ACGTCCTTCAGCTCGCAAGG+GGG | + | chr1_3:64822394-64822413 | Msa0133540:CDS | 60.0% | |
| ! | TCAATGTGCAGGGCTGGTGG+TGG | + | chr1_3:64823154-64823173 | Msa0133540:intron | 60.0% |
| CCCTTGCGAGCTGAAGGACG+TGG | - | chr1_3:64822395-64822414 | None:intergenic | 65.0% | |
| CTGACCCCCTTGCGAGCTGA+AGG | - | chr1_3:64822401-64822420 | None:intergenic | 65.0% | |
| CCCTTGCGAGCTGAAGGACG+TGG | - | chr1_3:64822395-64822414 | None:intergenic | 65.0% | |
| CTGACCCCCTTGCGAGCTGA+AGG | - | chr1_3:64822401-64822420 | None:intergenic | 65.0% | |
| !! | TGCAGGGCTGGTGGTGGAGC+AGG | + | chr1_3:64823160-64823179 | Msa0133540:intron | 70.0% |
| !! | TGCAGGGCTGGTGGTGGAGC+AGG | + | chr1_3:64823160-64823179 | Msa0133540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 64822082 | 64823580 | 64822082 | ID=Msa0133540;Name=Msa0133540 |
| chr1_3 | mRNA | 64822082 | 64823580 | 64822082 | ID=Msa0133540-mRNA-1;Parent=Msa0133540;Name=Msa0133540-mRNA-1;_AED=0.02;_eAED=0.02;_QI=131|1|1|1|1|1|4|382|111 |
| chr1_3 | exon | 64822082 | 64822207 | 64822082 | ID=Msa0133540-mRNA-1:exon:21881;Parent=Msa0133540-mRNA-1 |
| chr1_3 | exon | 64822309 | 64822415 | 64822309 | ID=Msa0133540-mRNA-1:exon:21882;Parent=Msa0133540-mRNA-1 |
| chr1_3 | exon | 64822847 | 64823046 | 64822847 | ID=Msa0133540-mRNA-1:exon:21883;Parent=Msa0133540-mRNA-1 |
| chr1_3 | exon | 64823165 | 64823580 | 64823165 | ID=Msa0133540-mRNA-1:exon:21884;Parent=Msa0133540-mRNA-1 |
| chr1_3 | five_prime_UTR | 64822082 | 64822207 | 64822082 | ID=Msa0133540-mRNA-1:five_prime_utr;Parent=Msa0133540-mRNA-1 |
| chr1_3 | five_prime_UTR | 64822309 | 64822313 | 64822309 | ID=Msa0133540-mRNA-1:five_prime_utr;Parent=Msa0133540-mRNA-1 |
| chr1_3 | CDS | 64822314 | 64822415 | 64822314 | ID=Msa0133540-mRNA-1:cds;Parent=Msa0133540-mRNA-1 |
| chr1_3 | CDS | 64822847 | 64823046 | 64822847 | ID=Msa0133540-mRNA-1:cds;Parent=Msa0133540-mRNA-1 |
| chr1_3 | CDS | 64823165 | 64823198 | 64823165 | ID=Msa0133540-mRNA-1:cds;Parent=Msa0133540-mRNA-1 |
| chr1_3 | three_prime_UTR | 64823199 | 64823580 | 64823199 | ID=Msa0133540-mRNA-1:three_prime_utr;Parent=Msa0133540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
