Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0599690 | XP_003605900.1 | 93.605 | 735 | 13 | 4 | 1 | 702 | 1 | 734 | 0.0 | 1395 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0599690 | sp|Q94C37|HDG2_ARATH | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0599690 | A0A1S2Z4T4 | 87.127 | 738 | 56 | 5 | 1 | 702 | 1 | 735 | 0.0 | 1313 |
Gene ID | Type | Classification |
---|---|---|
Msa0599690 | TF | HB-HD-ZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003470 | Msa0599690 | 0.863589 | 2.235332e-64 | -8.615850e-47 |
Msa0006870 | Msa0599690 | 0.808602 | 2.857730e-50 | -8.615850e-47 |
Msa0007450 | Msa0599690 | 0.836366 | 9.763192e-57 | -8.615850e-47 |
Msa0017120 | Msa0599690 | 0.832971 | 6.969047e-56 | -8.615850e-47 |
Msa0017940 | Msa0599690 | 0.805877 | 1.079721e-49 | -8.615850e-47 |
Msa0018220 | Msa0599690 | 0.835270 | 1.850492e-56 | -8.615850e-47 |
Msa0024680 | Msa0599690 | 0.812763 | 3.600246e-51 | -8.615850e-47 |
Msa0030310 | Msa0599690 | 0.803191 | 3.922204e-49 | -8.615850e-47 |
Msa0043680 | Msa0599690 | 0.816843 | 4.487314e-52 | -8.615850e-47 |
Msa0048020 | Msa0599690 | 0.803170 | 3.960349e-49 | -8.615850e-47 |
Msa0052020 | Msa0599690 | 0.804788 | 1.825736e-49 | -8.615850e-47 |
Msa0052460 | Msa0599690 | 0.812990 | 3.209733e-51 | -8.615850e-47 |
Msa0065390 | Msa0599690 | 0.836650 | 8.263671e-57 | -8.615850e-47 |
Msa0077410 | Msa0599690 | 0.827526 | 1.490437e-54 | -8.615850e-47 |
Msa0082820 | Msa0599690 | 0.806127 | 9.564147e-50 | -8.615850e-47 |
Msa0089210 | Msa0599690 | 0.815459 | 9.145280e-52 | -8.615850e-47 |
Msa0092660 | Msa0599690 | 0.808550 | 2.931063e-50 | -8.615850e-47 |
Msa0092730 | Msa0599690 | 0.810597 | 1.064903e-50 | -8.615850e-47 |
Msa0094420 | Msa0599690 | 0.852522 | 4.368317e-61 | -8.615850e-47 |
Msa0097050 | Msa0599690 | 0.836141 | 1.113625e-56 | -8.615850e-47 |
Msa0100570 | Msa0599690 | 0.804314 | 2.292373e-49 | -8.615850e-47 |
Msa0100860 | Msa0599690 | 0.802852 | 4.608606e-49 | -8.615850e-47 |
Msa0102800 | Msa0599690 | 0.800803 | 1.214223e-48 | -8.615850e-47 |
Msa0104420 | Msa0599690 | 0.808631 | 2.816388e-50 | -8.615850e-47 |
Msa0110710 | Msa0599690 | 0.839097 | 1.942028e-57 | -8.615850e-47 |
Msa0122210 | Msa0599690 | 0.807243 | 5.559242e-50 | -8.615850e-47 |
Msa0135980 | Msa0599690 | 0.828393 | 9.218827e-55 | -8.615850e-47 |
Msa0137600 | Msa0599690 | 0.809046 | 2.296012e-50 | -8.615850e-47 |
Msa0139900 | Msa0599690 | 0.838754 | 2.382759e-57 | -8.615850e-47 |
Msa0141670 | Msa0599690 | 0.807279 | 5.463296e-50 | -8.615850e-47 |
Msa0141830 | Msa0599690 | 0.807514 | 4.869640e-50 | -8.615850e-47 |
Msa0146470 | Msa0599690 | 0.862229 | 5.874633e-64 | -8.615850e-47 |
Msa0150210 | Msa0599690 | 0.814527 | 1.472172e-51 | -8.615850e-47 |
Msa0157020 | Msa0599690 | 0.844464 | 7.438350e-59 | -8.615850e-47 |
Msa0162030 | Msa0599690 | 0.808811 | 2.577878e-50 | -8.615850e-47 |
Msa0168390 | Msa0599690 | 0.803673 | 3.116152e-49 | -8.615850e-47 |
Msa0185390 | Msa0599690 | 0.816458 | 5.471902e-52 | -8.615850e-47 |
Msa0200970 | Msa0599690 | 0.805803 | 1.118996e-49 | -8.615850e-47 |
Msa0206080 | Msa0599690 | 0.819048 | 1.424749e-52 | -8.615850e-47 |
Msa0206120 | Msa0599690 | 0.820162 | 7.933206e-53 | -8.615850e-47 |
Msa0207180 | Msa0599690 | 0.840183 | 1.014002e-57 | -8.615850e-47 |
Msa0219660 | Msa0599690 | 0.822838 | 1.912493e-53 | -8.615850e-47 |
Msa0222070 | Msa0599690 | 0.811544 | 6.639338e-51 | -8.615850e-47 |
Msa0222120 | Msa0599690 | 0.815245 | 1.020631e-51 | -8.615850e-47 |
Msa0223280 | Msa0599690 | 0.801270 | 9.747549e-49 | -8.615850e-47 |
Msa0227490 | Msa0599690 | 0.809501 | 1.834036e-50 | -8.615850e-47 |
Msa0227500 | Msa0599690 | 0.837052 | 6.524502e-57 | -8.615850e-47 |
Msa0230400 | Msa0599690 | 0.831544 | 1.571556e-55 | -8.615850e-47 |
Msa0370600 | Msa0599690 | 0.827119 | 1.865319e-54 | -8.615850e-47 |
Msa0377560 | Msa0599690 | 0.803418 | 3.519772e-49 | -8.615850e-47 |
Msa0380060 | Msa0599690 | 0.857117 | 2.030983e-62 | -8.615850e-47 |
Msa0380920 | Msa0599690 | 0.802169 | 6.372650e-49 | -8.615850e-47 |
Msa0382290 | Msa0599690 | 0.840226 | 9.879547e-58 | -8.615850e-47 |
Msa0382560 | Msa0599690 | 0.828592 | 8.252720e-55 | -8.615850e-47 |
Msa0392450 | Msa0599690 | 0.805424 | 1.343683e-49 | -8.615850e-47 |
Msa0413180 | Msa0599690 | 0.806381 | 8.457464e-50 | -8.615850e-47 |
Msa0417630 | Msa0599690 | 0.867334 | 1.478026e-65 | -8.615850e-47 |
Msa0418200 | Msa0599690 | 0.817561 | 3.093742e-52 | -8.615850e-47 |
Msa0418480 | Msa0599690 | 0.835243 | 1.879098e-56 | -8.615850e-47 |
Msa0420070 | Msa0599690 | 0.806001 | 1.016947e-49 | -8.615850e-47 |
Msa0427520 | Msa0599690 | -0.817915 | 2.574379e-52 | -8.615850e-47 |
Msa0429270 | Msa0599690 | 0.844657 | 6.600193e-59 | -8.615850e-47 |
Msa0431800 | Msa0599690 | 0.831428 | 1.679002e-55 | -8.615850e-47 |
Msa0436450 | Msa0599690 | 0.815681 | 8.161386e-52 | -8.615850e-47 |
Msa0439780 | Msa0599690 | 0.805306 | 1.422445e-49 | -8.615850e-47 |
Msa0448160 | Msa0599690 | 0.805830 | 1.104292e-49 | -8.615850e-47 |
Msa0450860 | Msa0599690 | 0.816132 | 6.473166e-52 | -8.615850e-47 |
Msa0458110 | Msa0599690 | 0.800673 | 1.290806e-48 | -8.615850e-47 |
Msa0465860 | Msa0599690 | 0.838251 | 3.214223e-57 | -8.615850e-47 |
Msa0244750 | Msa0599690 | 0.814392 | 1.576915e-51 | -8.615850e-47 |
Msa0247310 | Msa0599690 | 0.820780 | 5.724225e-53 | -8.615850e-47 |
Msa0249270 | Msa0599690 | 0.821906 | 3.146813e-53 | -8.615850e-47 |
Msa0257130 | Msa0599690 | 0.826734 | 2.305538e-54 | -8.615850e-47 |
Msa0259330 | Msa0599690 | 0.813104 | 3.030167e-51 | -8.615850e-47 |
Msa0263620 | Msa0599690 | 0.815235 | 1.025643e-51 | -8.615850e-47 |
Msa0274780 | Msa0599690 | 0.834425 | 3.019494e-56 | -8.615850e-47 |
Msa0281570 | Msa0599690 | 0.822557 | 2.222708e-53 | -8.615850e-47 |
Msa0290950 | Msa0599690 | 0.835824 | 1.340096e-56 | -8.615850e-47 |
Msa0290970 | Msa0599690 | 0.824445 | 8.042454e-54 | -8.615850e-47 |
Msa0291040 | Msa0599690 | 0.809476 | 1.856770e-50 | -8.615850e-47 |
Msa0297920 | Msa0599690 | 0.824775 | 6.722570e-54 | -8.615850e-47 |
Msa0301180 | Msa0599690 | 0.800361 | 1.493944e-48 | -8.615850e-47 |
Msa0314790 | Msa0599690 | 0.820213 | 7.724957e-53 | -8.615850e-47 |
Msa0315480 | Msa0599690 | 0.850885 | 1.271324e-60 | -8.615850e-47 |
Msa0317260 | Msa0599690 | 0.814284 | 1.666106e-51 | -8.615850e-47 |
Msa0320540 | Msa0599690 | 0.819695 | 1.014861e-52 | -8.615850e-47 |
Msa0331780 | Msa0599690 | 0.823115 | 1.647582e-53 | -8.615850e-47 |
Msa0344070 | Msa0599690 | 0.811670 | 6.232451e-51 | -8.615850e-47 |
Msa0344580 | Msa0599690 | 0.803814 | 2.912508e-49 | -8.615850e-47 |
Msa0351510 | Msa0599690 | 0.807274 | 5.476929e-50 | -8.615850e-47 |
Msa0358230 | Msa0599690 | 0.849984 | 2.275820e-60 | -8.615850e-47 |
Msa0485280 | Msa0599690 | 0.825891 | 3.661265e-54 | -8.615850e-47 |
Msa0487560 | Msa0599690 | 0.803872 | 2.833413e-49 | -8.615850e-47 |
Msa0487620 | Msa0599690 | 0.809303 | 2.022627e-50 | -8.615850e-47 |
Msa0490300 | Msa0599690 | 0.803806 | 2.924316e-49 | -8.615850e-47 |
Msa0510230 | Msa0599690 | 0.859962 | 2.877028e-63 | -8.615850e-47 |
Msa0519200 | Msa0599690 | 0.868805 | 4.969344e-66 | -8.615850e-47 |
Msa0520730 | Msa0599690 | 0.811586 | 6.500890e-51 | -8.615850e-47 |
Msa0524210 | Msa0599690 | 0.821651 | 3.605500e-53 | -8.615850e-47 |
Msa0525240 | Msa0599690 | 0.802201 | 6.277284e-49 | -8.615850e-47 |
Msa0526700 | Msa0599690 | 0.803416 | 3.522362e-49 | -8.615850e-47 |
Msa0532840 | Msa0599690 | 0.818644 | 1.759907e-52 | -8.615850e-47 |
Msa0533010 | Msa0599690 | 0.815475 | 9.070191e-52 | -8.615850e-47 |
Msa0538570 | Msa0599690 | 0.865192 | 7.056688e-65 | -8.615850e-47 |
Msa0543850 | Msa0599690 | 0.875912 | 2.118991e-68 | -8.615850e-47 |
Msa0546740 | Msa0599690 | 0.826545 | 2.557685e-54 | -8.615850e-47 |
Msa0547050 | Msa0599690 | 0.875697 | 2.511621e-68 | -8.615850e-47 |
Msa0561510 | Msa0599690 | 0.835365 | 1.750302e-56 | -8.615850e-47 |
Msa0567290 | Msa0599690 | 0.808436 | 3.100576e-50 | -8.615850e-47 |
Msa0575250 | Msa0599690 | 0.820388 | 7.041728e-53 | -8.615850e-47 |
Msa0578900 | Msa0599690 | 0.809371 | 1.955445e-50 | -8.615850e-47 |
Msa0581340 | Msa0599690 | 0.831934 | 1.259754e-55 | -8.615850e-47 |
Msa0581460 | Msa0599690 | 0.807212 | 5.645280e-50 | -8.615850e-47 |
Msa0593710 | Msa0599690 | 0.807612 | 4.643120e-50 | -8.615850e-47 |
Msa0594390 | Msa0599690 | 0.864047 | 1.610106e-64 | -8.615850e-47 |
Msa0599690 | Msa0600390 | 0.861502 | 9.804808e-64 | -8.615850e-47 |
Msa0599690 | Msa0601110 | 0.836211 | 1.068967e-56 | -8.615850e-47 |
Msa0599690 | Msa0601120 | 0.834646 | 2.657189e-56 | -8.615850e-47 |
Msa0599690 | Msa0601780 | 0.829869 | 4.043513e-55 | -8.615850e-47 |
Msa0599690 | Msa0607280 | 0.812487 | 4.135556e-51 | -8.615850e-47 |
Msa0599690 | Msa0607480 | 0.813589 | 2.371610e-51 | -8.615850e-47 |
Msa0599690 | Msa0610860 | 0.804410 | 2.189456e-49 | -8.615850e-47 |
Msa0599690 | Msa0614230 | 0.851373 | 9.258310e-61 | -8.615850e-47 |
Msa0599690 | Msa0620090 | 0.814444 | 1.535876e-51 | -8.615850e-47 |
Msa0599690 | Msa0620270 | 0.813552 | 2.415702e-51 | -8.615850e-47 |
Msa0599690 | Msa0621770 | 0.811977 | 5.343661e-51 | -8.615850e-47 |
Msa0599690 | Msa0633750 | 0.812160 | 4.875947e-51 | -8.615850e-47 |
Msa0599690 | Msa0633880 | 0.803046 | 4.202489e-49 | -8.615850e-47 |
Msa0599690 | Msa0634270 | 0.838021 | 3.682694e-57 | -8.615850e-47 |
Msa0599690 | Msa0638710 | 0.808680 | 2.749693e-50 | -8.615850e-47 |
Msa0599690 | Msa0640390 | 0.857247 | 1.859358e-62 | -8.615850e-47 |
Msa0599690 | Msa0640880 | 0.863351 | 2.649486e-64 | -8.615850e-47 |
Msa0599690 | Msa0640990 | 0.800575 | 1.351514e-48 | -8.615850e-47 |
Msa0599690 | Msa0641620 | 0.831869 | 1.306668e-55 | -8.615850e-47 |
Msa0599690 | Msa0642650 | 0.837962 | 3.814452e-57 | -8.615850e-47 |
Msa0599690 | Msa0642910 | 0.827915 | 1.201548e-54 | -8.615850e-47 |
Msa0599690 | Msa0645050 | 0.809976 | 1.449979e-50 | -8.615850e-47 |
Msa0599690 | Msa0654060 | 0.803666 | 3.126817e-49 | -8.615850e-47 |
Msa0599690 | Msa0659960 | 0.819927 | 8.980588e-53 | -8.615850e-47 |
Msa0599690 | Msa0667220 | 0.822713 | 2.045012e-53 | -8.615850e-47 |
Msa0599690 | Msa0667970 | 0.813335 | 2.696735e-51 | -8.615850e-47 |
Msa0599690 | Msa0678890 | 0.910456 | 1.835688e-82 | -8.615850e-47 |
Msa0599690 | Msa0681890 | 0.845113 | 4.971377e-59 | -8.615850e-47 |
Msa0599690 | Msa0682400 | 0.824635 | 7.254115e-54 | -8.615850e-47 |
Msa0599690 | Msa0683650 | 0.823436 | 1.386778e-53 | -8.615850e-47 |
Msa0599690 | Msa0700910 | 0.840867 | 6.714583e-58 | -8.615850e-47 |
Msa0599690 | Msa0701320 | 0.803786 | 2.951800e-49 | -8.615850e-47 |
Msa0599690 | Msa0703720 | 0.843041 | 1.788379e-58 | -8.615850e-47 |
Msa0599690 | Msa0703760 | 0.825810 | 3.826809e-54 | -8.615850e-47 |
Msa0599690 | Msa0706530 | 0.801976 | 6.983212e-49 | -8.615850e-47 |
Msa0599690 | Msa0709480 | 0.814108 | 1.822384e-51 | -8.615850e-47 |
Msa0599690 | Msa0717510 | 0.809055 | 2.286392e-50 | -8.615850e-47 |
Msa0599690 | Msa0720270 | 0.840783 | 7.060517e-58 | -8.615850e-47 |
Msa0599690 | Msa0722940 | 0.841277 | 5.238107e-58 | -8.615850e-47 |
Msa0599690 | Msa0723150 | 0.837268 | 5.745968e-57 | -8.615850e-47 |
Msa0599690 | Msa0725920 | 0.805425 | 1.343481e-49 | -8.615850e-47 |
Msa0599690 | Msa0730180 | 0.809985 | 1.443081e-50 | -8.615850e-47 |
Msa0599690 | Msa0734000 | 0.806656 | 7.398013e-50 | -8.615850e-47 |
Msa0599690 | Msa0738880 | 0.824029 | 1.007219e-53 | -8.615850e-47 |
Msa0599690 | Msa0738970 | 0.813198 | 2.890398e-51 | -8.615850e-47 |
Msa0599690 | Msa0740420 | 0.817471 | 3.242231e-52 | -8.615850e-47 |
Msa0599690 | Msa0770430 | 0.803232 | 3.845898e-49 | -8.615850e-47 |
Msa0599690 | Msa0782330 | 0.802112 | 6.546508e-49 | -8.615850e-47 |
Msa0599690 | Msa0790830 | 0.812827 | 3.484737e-51 | -8.615850e-47 |
Msa0599690 | Msa0799210 | 0.828177 | 1.039329e-54 | -8.615850e-47 |
Msa0599690 | Msa0802500 | 0.810508 | 1.113149e-50 | -8.615850e-47 |
Msa0599690 | Msa0803130 | 0.872024 | 4.368977e-67 | -8.615850e-47 |
Msa0599690 | Msa0804110 | 0.815962 | 7.064963e-52 | -8.615850e-47 |
Msa0599690 | Msa0819320 | 0.815630 | 8.377337e-52 | -8.615850e-47 |
Msa0599690 | Msa0819370 | 0.823376 | 1.432384e-53 | -8.615850e-47 |
Msa0599690 | Msa0819470 | 0.811346 | 7.329314e-51 | -8.615850e-47 |
Msa0599690 | Msa0820670 | 0.816310 | 5.908076e-52 | -8.615850e-47 |
Msa0599690 | Msa0823300 | 0.800976 | 1.119168e-48 | -8.615850e-47 |
Msa0599690 | Msa0841490 | 0.870608 | 1.283729e-66 | -8.615850e-47 |
Msa0599690 | Msa0843290 | 0.854101 | 1.540574e-61 | -8.615850e-47 |
Msa0599690 | Msa0844530 | 0.813807 | 2.122971e-51 | -8.615850e-47 |
Msa0599690 | Msa0859390 | 0.816989 | 4.159788e-52 | -8.615850e-47 |
Msa0599690 | Msa0867150 | 0.804532 | 2.064983e-49 | -8.615850e-47 |
Msa0599690 | Msa0877420 | 0.811988 | 5.314278e-51 | -8.615850e-47 |
Msa0599690 | Msa0900320 | 0.829071 | 6.317835e-55 | -8.615850e-47 |
Msa0599690 | Msa0906370 | 0.804005 | 2.658901e-49 | -8.615850e-47 |
Msa0599690 | Msa0922540 | 0.816195 | 6.267740e-52 | -8.615850e-47 |
Msa0599690 | Msa0925160 | 0.817916 | 2.573054e-52 | -8.615850e-47 |
Msa0599690 | Msa0930330 | 0.841726 | 3.989483e-58 | -8.615850e-47 |
Msa0599690 | Msa0931480 | 0.858303 | 9.039274e-63 | -8.615850e-47 |
Msa0599690 | Msa0931610 | 0.827663 | 1.381736e-54 | -8.615850e-47 |
Msa0599690 | Msa0937550 | 0.816681 | 4.877959e-52 | -8.615850e-47 |
Msa0599690 | Msa0942730 | 0.825340 | 4.944922e-54 | -8.615850e-47 |
Msa0599690 | Msa0951460 | 0.849269 | 3.604824e-60 | -8.615850e-47 |
Msa0599690 | Msa0951960 | 0.842332 | 2.757849e-58 | -8.615850e-47 |
Msa0599690 | Msa0955260 | 0.807106 | 5.942207e-50 | -8.615850e-47 |
Msa0599690 | Msa0955310 | 0.807522 | 4.851282e-50 | -8.615850e-47 |
Msa0599690 | Msa0958020 | 0.849875 | 2.441198e-60 | -8.615850e-47 |
Msa0599690 | Msa0965960 | 0.826979 | 2.014809e-54 | -8.615850e-47 |
Msa0599690 | Msa0972730 | 0.826255 | 2.998375e-54 | -8.615850e-47 |
Msa0599690 | Msa0974750 | 0.831900 | 1.284283e-55 | -8.615850e-47 |
Msa0599690 | Msa0990520 | 0.835487 | 1.630573e-56 | -8.615850e-47 |
Msa0599690 | Msa0992570 | 0.824556 | 7.572218e-54 | -8.615850e-47 |
Msa0599690 | Msa0992590 | 0.828981 | 6.644730e-55 | -8.615850e-47 |
Msa0599690 | Msa1002040 | 0.833536 | 5.041919e-56 | -8.615850e-47 |
Msa0599690 | Msa1004500 | 0.838455 | 2.847625e-57 | -8.615850e-47 |
Msa0599690 | Msa1004520 | 0.819736 | 9.931286e-53 | -8.615850e-47 |
Msa0599690 | Msa1014270 | 0.855185 | 7.474276e-62 | -8.615850e-47 |
Msa0599690 | Msa1018790 | 0.801987 | 6.945214e-49 | -8.615850e-47 |
Msa0599690 | Msa1022310 | 0.826866 | 2.144243e-54 | -8.615850e-47 |
Msa0599690 | Msa1022650 | 0.829765 | 4.285639e-55 | -8.615850e-47 |
Msa0599690 | Msa1024140 | 0.800863 | 1.180395e-48 | -8.615850e-47 |
Msa0599690 | Msa1027790 | 0.852414 | 4.688202e-61 | -8.615850e-47 |
Msa0599690 | Msa1030280 | 0.814460 | 1.523341e-51 | -8.615850e-47 |
Msa0599690 | Msa1041100 | 0.806490 | 8.020900e-50 | -8.615850e-47 |
Msa0599690 | Msa1041120 | 0.802337 | 5.885893e-49 | -8.615850e-47 |
Msa0599690 | Msa1044340 | 0.802695 | 4.965529e-49 | -8.615850e-47 |
Msa0599690 | Msa1045880 | 0.832381 | 9.765096e-56 | -8.615850e-47 |
Msa0599690 | Msa1045970 | 0.833842 | 4.227857e-56 | -8.615850e-47 |
Msa0599690 | Msa1046870 | 0.840378 | 9.015360e-58 | -8.615850e-47 |
Msa0599690 | Msa1048710 | 0.822734 | 2.021172e-53 | -8.615850e-47 |
Msa0599690 | Msa1050240 | 0.822726 | 2.030815e-53 | -8.615850e-47 |
Msa0599690 | Msa1055260 | 0.813900 | 2.024903e-51 | -8.615850e-47 |
Msa0599690 | Msa1061180 | 0.844957 | 5.479852e-59 | -8.615850e-47 |
Msa0599690 | Msa1072080 | 0.828278 | 9.826885e-55 | -8.615850e-47 |
Msa0599690 | Msa1106560 | 0.810222 | 1.283248e-50 | -8.615850e-47 |
Msa0599690 | Msa1112610 | 0.850931 | 1.234286e-60 | -8.615850e-47 |
Msa0599690 | Msa1125780 | 0.806122 | 9.590163e-50 | -8.615850e-47 |
Msa0599690 | Msa1125950 | 0.807688 | 4.472712e-50 | -8.615850e-47 |
Msa0599690 | Msa1130690 | 0.811809 | 5.814913e-51 | -8.615850e-47 |
Msa0599690 | Msa1134400 | 0.821366 | 4.194469e-53 | -8.615850e-47 |
Msa0599690 | Msa1135870 | 0.802374 | 5.783628e-49 | -8.615850e-47 |
Msa0599690 | Msa1149760 | 0.836028 | 1.189746e-56 | -8.615850e-47 |
Msa0599690 | Msa1159100 | 0.823197 | 1.576811e-53 | -8.615850e-47 |
Msa0599690 | Msa1166180 | 0.812267 | 4.620561e-51 | -8.615850e-47 |
Msa0599690 | Msa1166280 | 0.801070 | 1.070771e-48 | -8.615850e-47 |
Msa0599690 | Msa1171340 | 0.814985 | 1.165470e-51 | -8.615850e-47 |
Msa0599690 | Msa1175750 | 0.817571 | 3.077038e-52 | -8.615850e-47 |
Msa0599690 | Msa1187430 | 0.829952 | 3.859725e-55 | -8.615850e-47 |
Msa0599690 | Msa1190910 | 0.809390 | 1.937775e-50 | -8.615850e-47 |
Msa0599690 | Msa1197110 | 0.829451 | 5.110277e-55 | -8.615850e-47 |
Msa0599690 | Msa1200920 | 0.861302 | 1.128473e-63 | -8.615850e-47 |
Msa0599690 | Msa1215210 | 0.808978 | 2.374607e-50 | -8.615850e-47 |
Msa0599690 | Msa1219250 | 0.833331 | 5.672289e-56 | -8.615850e-47 |
Msa0599690 | Msa1220450 | -0.831133 | 1.984309e-55 | -8.615850e-47 |
Msa0599690 | Msa1220460 | -0.821197 | 4.588214e-53 | -8.615850e-47 |
Msa0599690 | Msa1220480 | -0.820256 | 7.552592e-53 | -8.615850e-47 |
Msa0599690 | Msa1221260 | 0.832496 | 9.144177e-56 | -8.615850e-47 |
Msa0599690 | Msa1223840 | 0.827163 | 1.820604e-54 | -8.615850e-47 |
Msa0599690 | Msa1224670 | 0.817027 | 4.080201e-52 | -8.615850e-47 |
Msa0599690 | Msa1226360 | 0.807439 | 5.052163e-50 | -8.615850e-47 |
Msa0599690 | Msa1232010 | 0.801757 | 7.746735e-49 | -8.615850e-47 |
Msa0599690 | Msa1232860 | 0.865040 | 7.876292e-65 | -8.615850e-47 |
Msa0599690 | Msa1235890 | 0.824110 | 9.637561e-54 | -8.615850e-47 |
Msa0599690 | Msa1237930 | 0.800282 | 1.550757e-48 | -8.615850e-47 |
Msa0599690 | Msa1241680 | 0.805318 | 1.414786e-49 | -8.615850e-47 |
Msa0599690 | Msa1250670 | 0.813899 | 2.026493e-51 | -8.615850e-47 |
Msa0599690 | Msa1254770 | 0.810196 | 1.300128e-50 | -8.615850e-47 |
Msa0599690 | Msa1254800 | 0.814865 | 1.238983e-51 | -8.615850e-47 |
Msa0599690 | Msa1258810 | 0.819674 | 1.025927e-52 | -8.615850e-47 |
Msa0599690 | Msa1263030 | 0.820521 | 6.564858e-53 | -8.615850e-47 |
Msa0599690 | Msa1265310 | 0.810438 | 1.152768e-50 | -8.615850e-47 |
Msa0599690 | Msa1271510 | 0.809441 | 1.889260e-50 | -8.615850e-47 |
Msa0599690 | Msa1271600 | 0.811739 | 6.022849e-51 | -8.615850e-47 |
Msa0599690 | Msa1274740 | 0.816170 | 6.347834e-52 | -8.615850e-47 |
Msa0599690 | Msa1275290 | 0.827839 | 1.253624e-54 | -8.615850e-47 |
Msa0599690 | Msa1291880 | 0.800075 | 1.708150e-48 | -8.615850e-47 |
Msa0599690 | Msa1302150 | 0.821114 | 4.796623e-53 | -8.615850e-47 |
Msa0599690 | Msa1307370 | 0.816614 | 5.050783e-52 | -8.615850e-47 |
Msa0599690 | Msa1312730 | 0.828744 | 7.583667e-55 | -8.615850e-47 |
Msa0599690 | Msa1313460 | 0.844950 | 5.502220e-59 | -8.615850e-47 |
Msa0599690 | Msa1315980 | 0.830497 | 2.840757e-55 | -8.615850e-47 |
Msa0599690 | Msa1316170 | 0.803642 | 3.161841e-49 | -8.615850e-47 |
Msa0599690 | Msa1323060 | 0.802290 | 6.017948e-49 | -8.615850e-47 |
Msa0599690 | Msa1330240 | 0.810952 | 8.924613e-51 | -8.615850e-47 |
Msa0599690 | Msa1350670 | 0.845623 | 3.618635e-59 | -8.615850e-47 |
Msa0599690 | Msa1352820 | 0.804741 | 1.867554e-49 | -8.615850e-47 |
Msa0599690 | Msa1354040 | 0.849780 | 2.595715e-60 | -8.615850e-47 |
Msa0599690 | Msa1355400 | 0.816899 | 4.359386e-52 | -8.615850e-47 |
Msa0599690 | Msa1365020 | 0.841791 | 3.836283e-58 | -8.615850e-47 |
Msa0599690 | Msa1365870 | 0.811469 | 6.891899e-51 | -8.615850e-47 |
Msa0599690 | Msa1367410 | 0.819552 | 1.093902e-52 | -8.615850e-47 |
Msa0599690 | Msa1367810 | 0.807166 | 5.771244e-50 | -8.615850e-47 |
Msa0599690 | Msa1367940 | 0.829123 | 6.137596e-55 | -8.615850e-47 |
Msa0599690 | Msa1379980 | 0.815355 | 9.647066e-52 | -8.615850e-47 |
Msa0599690 | Msa1381130 | 0.819397 | 1.186399e-52 | -8.615850e-47 |
Msa0599690 | Msa1382720 | 0.809673 | 1.684151e-50 | -8.615850e-47 |
Msa0599690 | Msa1405770 | 0.819442 | 1.158927e-52 | -8.615850e-47 |
Msa0599690 | Msa1417650 | 0.816611 | 5.057595e-52 | -8.615850e-47 |
Msa0599690 | Msa1421810 | 0.841449 | 4.719175e-58 | -8.615850e-47 |
Msa0599690 | Msa1425060 | 0.809169 | 2.160547e-50 | -8.615850e-47 |
Msa0599690 | Msa1429830 | 0.817208 | 3.714998e-52 | -8.615850e-47 |
Msa0599690 | Msa1435040 | 0.821716 | 3.481505e-53 | -8.615850e-47 |
Msa0599690 | Msa1435050 | 0.838386 | 2.965025e-57 | -8.615850e-47 |
Msa0599690 | Msa1437150 | 0.813343 | 2.685000e-51 | -8.615850e-47 |
Msa0599690 | Msa1439670 | 0.847911 | 8.567861e-60 | -8.615850e-47 |
Msa0599690 | Msa1439680 | 0.840375 | 9.031456e-58 | -8.615850e-47 |
Msa0599690 | Msa1442300 | 0.813814 | 2.115477e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0599690 | MtrunA17_Chr4g0024351 | 93.605 | 735 | 13 | 4 | 1 | 702 | 1 | 734 | 0.0 | 1395 |
Msa0599690 | MtrunA17_Chr2g0322731 | 81.081 | 740 | 95 | 7 | 3 | 702 | 36 | 770 | 0.0 | 1192 |
Msa0599690 | MtrunA17_Chr8g0350321 | 54.424 | 746 | 270 | 11 | 17 | 701 | 74 | 810 | 0.0 | 775 |
Msa0599690 | MtrunA17_Chr7g0246631 | 56.566 | 693 | 246 | 10 | 60 | 701 | 90 | 778 | 0.0 | 770 |
Msa0599690 | MtrunA17_Chr1g0203671 | 50.614 | 733 | 296 | 11 | 28 | 697 | 60 | 789 | 0.0 | 712 |
Msa0599690 | MtrunA17_Chr5g0394111 | 52.553 | 666 | 267 | 10 | 45 | 697 | 17 | 646 | 0.0 | 670 |
Msa0599690 | MtrunA17_Chr6g0481041 | 46.730 | 734 | 309 | 12 | 44 | 702 | 2 | 728 | 0.0 | 662 |
Msa0599690 | MtrunA17_Chr5g0410711 | 43.329 | 757 | 362 | 16 | 5 | 701 | 33 | 782 | 0.0 | 612 |
Msa0599690 | MtrunA17_Chr2g0331581 | 45.510 | 657 | 330 | 10 | 65 | 700 | 143 | 792 | 0.0 | 598 |
Msa0599690 | MtrunA17_Chr6g0472471 | 43.164 | 746 | 333 | 15 | 28 | 697 | 35 | 765 | 0.0 | 580 |
Msa0599690 | MtrunA17_Chr7g0224451 | 43.133 | 466 | 219 | 12 | 44 | 492 | 2 | 438 | 1.56e-121 | 370 |
Msa0599690 | MtrunA17_Chr2g0292731 | 36.646 | 483 | 295 | 7 | 222 | 697 | 70 | 548 | 3.77e-99 | 315 |
Msa0599690 | MtrunA17_Chr2g0292741 | 37.910 | 488 | 277 | 12 | 222 | 697 | 62 | 535 | 1.28e-97 | 311 |
Msa0599690 | MtrunA17_Chr7g0224481 | 42.222 | 360 | 170 | 10 | 44 | 387 | 2 | 339 | 3.59e-83 | 266 |
Msa0599690 | MtrunA17_Chr7g0224491 | 45.768 | 319 | 138 | 10 | 390 | 698 | 1 | 294 | 2.14e-77 | 250 |
Msa0599690 | MtrunA17_Chr2g0292761 | 31.966 | 585 | 331 | 18 | 140 | 699 | 1 | 543 | 9.07e-73 | 246 |
Msa0599690 | MtrunA17_Chr2g0319671 | 47.647 | 170 | 85 | 2 | 269 | 438 | 103 | 268 | 1.85e-48 | 172 |
Msa0599690 | MtrunA17_Chr5g0419821 | 48.387 | 124 | 63 | 1 | 59 | 181 | 31 | 154 | 7.72e-36 | 133 |
Msa0599690 | MtrunA17_Chr2g0319691 | 51.261 | 119 | 58 | 0 | 330 | 448 | 1 | 119 | 1.71e-34 | 128 |
Msa0599690 | MtrunA17_Chr2g0319681 | 34.335 | 233 | 146 | 3 | 472 | 701 | 1 | 229 | 2.90e-34 | 131 |
Msa0599690 | MtrunA17_Chr2g0319701 | 36.522 | 230 | 135 | 5 | 476 | 701 | 5 | 227 | 2.97e-34 | 131 |
Msa0599690 | MtrunA17_Chr1g0205981 | 39.378 | 193 | 79 | 5 | 116 | 275 | 1 | 188 | 5.12e-29 | 114 |
Msa0599690 | MtrunA17_Chr4g0028991 | 22.764 | 738 | 421 | 24 | 45 | 698 | 9 | 681 | 1.79e-28 | 122 |
Msa0599690 | MtrunA17_Chr7g0224461 | 47.934 | 121 | 47 | 5 | 586 | 697 | 1 | 114 | 7.48e-22 | 91.3 |
Msa0599690 | MtrunA17_Chr2g0326731 | 23.256 | 516 | 305 | 17 | 64 | 546 | 23 | 480 | 6.58e-21 | 98.2 |
Msa0599690 | MtrunA17_Chr2g0304191 | 31.618 | 136 | 83 | 3 | 224 | 354 | 1 | 131 | 1.31e-15 | 74.3 |
Msa0599690 | MtrunA17_Chr7g0224431 | 34.375 | 160 | 64 | 4 | 239 | 397 | 1 | 120 | 1.95e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0599690 | AT1G05230.8 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.4 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.9 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.10 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.7 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.11 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.2 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.6 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.5 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.1 | 73.414 | 741 | 138 | 8 | 1 | 702 | 1 | 721 | 0.0 | 1082 |
Msa0599690 | AT1G05230.3 | 73.144 | 741 | 138 | 9 | 1 | 702 | 1 | 719 | 0.0 | 1073 |
Msa0599690 | AT4G21750.2 | 68.653 | 772 | 162 | 11 | 1 | 702 | 1 | 762 | 0.0 | 1028 |
Msa0599690 | AT4G21750.1 | 68.653 | 772 | 162 | 11 | 1 | 702 | 1 | 762 | 0.0 | 1028 |
Msa0599690 | AT4G21750.3 | 68.653 | 772 | 162 | 11 | 1 | 702 | 1 | 762 | 0.0 | 1028 |
Msa0599690 | AT4G21750.4 | 68.653 | 772 | 162 | 11 | 1 | 702 | 1 | 762 | 0.0 | 1028 |
Msa0599690 | AT4G04890.2 | 70.659 | 743 | 166 | 15 | 1 | 698 | 1 | 736 | 0.0 | 1028 |
Msa0599690 | AT4G04890.1 | 70.659 | 743 | 166 | 15 | 1 | 698 | 1 | 736 | 0.0 | 1028 |
Msa0599690 | AT1G05230.12 | 71.753 | 616 | 122 | 7 | 1 | 577 | 1 | 603 | 0.0 | 888 |
Msa0599690 | AT3G61150.1 | 51.934 | 724 | 285 | 8 | 39 | 701 | 86 | 807 | 0.0 | 733 |
Msa0599690 | AT4G00730.1 | 53.675 | 721 | 283 | 12 | 20 | 701 | 94 | 802 | 0.0 | 720 |
Msa0599690 | AT2G32370.1 | 52.496 | 701 | 286 | 11 | 32 | 702 | 42 | 725 | 0.0 | 717 |
Msa0599690 | AT1G73360.1 | 47.406 | 694 | 306 | 9 | 61 | 702 | 32 | 718 | 0.0 | 623 |
Msa0599690 | AT1G17920.2 | 45.726 | 702 | 317 | 11 | 43 | 702 | 7 | 686 | 0.0 | 590 |
Msa0599690 | AT1G17920.1 | 45.726 | 702 | 317 | 11 | 43 | 702 | 7 | 686 | 0.0 | 590 |
Msa0599690 | AT5G52170.2 | 45.677 | 694 | 321 | 13 | 28 | 697 | 22 | 683 | 0.0 | 580 |
Msa0599690 | AT5G52170.3 | 45.821 | 694 | 315 | 15 | 28 | 697 | 22 | 678 | 0.0 | 575 |
Msa0599690 | AT5G52170.1 | 45.821 | 694 | 315 | 15 | 28 | 697 | 22 | 678 | 0.0 | 575 |
Msa0599690 | AT5G46880.3 | 42.318 | 716 | 332 | 15 | 54 | 699 | 104 | 808 | 0.0 | 557 |
Msa0599690 | AT5G46880.1 | 42.318 | 716 | 332 | 15 | 54 | 699 | 104 | 808 | 0.0 | 557 |
Msa0599690 | AT5G46880.2 | 42.318 | 716 | 332 | 15 | 54 | 699 | 104 | 808 | 0.0 | 557 |
Msa0599690 | AT1G79840.1 | 43.239 | 673 | 341 | 11 | 51 | 700 | 91 | 745 | 0.0 | 545 |
Msa0599690 | AT1G79840.3 | 43.239 | 673 | 341 | 11 | 51 | 700 | 33 | 687 | 0.0 | 543 |
Msa0599690 | AT1G79840.6 | 43.239 | 673 | 341 | 11 | 51 | 700 | 33 | 687 | 0.0 | 543 |
Msa0599690 | AT1G79840.2 | 43.239 | 673 | 341 | 11 | 51 | 700 | 120 | 774 | 0.0 | 543 |
Msa0599690 | AT4G17710.1 | 42.018 | 664 | 324 | 12 | 54 | 697 | 81 | 703 | 1.01e-172 | 511 |
Msa0599690 | AT1G79840.4 | 44.037 | 545 | 268 | 10 | 51 | 573 | 91 | 620 | 1.42e-153 | 459 |
Msa0599690 | AT3G03260.1 | 38.601 | 715 | 357 | 19 | 45 | 698 | 2 | 695 | 3.54e-150 | 453 |
Msa0599690 | AT4G00730.2 | 48.812 | 463 | 190 | 8 | 28 | 452 | 103 | 556 | 7.40e-143 | 430 |
Msa0599690 | AT4G25530.1 | 38.636 | 660 | 365 | 9 | 61 | 697 | 40 | 682 | 2.39e-142 | 432 |
Msa0599690 | AT5G17320.1 | 35.484 | 713 | 371 | 19 | 59 | 700 | 24 | 718 | 1.36e-128 | 398 |
Msa0599690 | AT1G34650.1 | 34.551 | 712 | 385 | 18 | 55 | 700 | 12 | 708 | 7.77e-119 | 372 |
Msa0599690 | AT3G03260.2 | 38.504 | 548 | 279 | 15 | 45 | 545 | 2 | 538 | 1.37e-111 | 348 |
Msa0599690 | AT1G79840.5 | 43.396 | 424 | 203 | 9 | 51 | 452 | 91 | 499 | 8.17e-108 | 337 |
Msa0599690 | AT5G07260.1 | 29.942 | 521 | 311 | 20 | 128 | 634 | 11 | 491 | 2.29e-53 | 193 |
Msa0599690 | AT5G07260.2 | 29.808 | 520 | 308 | 20 | 128 | 634 | 11 | 486 | 7.32e-53 | 191 |
Msa0599690 | AT4G32880.1 | 23.856 | 721 | 405 | 25 | 64 | 701 | 15 | 674 | 4.50e-32 | 133 |
Msa0599690 | AT1G52150.3 | 23.142 | 713 | 413 | 25 | 64 | 698 | 17 | 672 | 3.10e-27 | 118 |
Msa0599690 | AT1G52150.1 | 23.142 | 713 | 413 | 25 | 64 | 698 | 17 | 672 | 4.07e-27 | 118 |
Msa0599690 | AT1G52150.2 | 23.109 | 714 | 413 | 25 | 64 | 698 | 17 | 673 | 4.53e-27 | 118 |
Msa0599690 | AT5G60690.1 | 23.047 | 512 | 303 | 17 | 64 | 546 | 25 | 474 | 7.75e-23 | 104 |
Find 222 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTTAATCATTCATTTC+TGG | 0.119880 | 4_2:+39819787 | Msa0599690:five_prime_UTR |
TGATTGCCAAAACCAATTTC+TGG | 0.191828 | 4_2:-39822737 | None:intergenic |
TCCTTCCTTTGCTTGTCATC+TGG | 0.193302 | 4_2:-39821732 | None:intergenic |
ACATACTCTTCCTCCCTTCT+TGG | 0.195793 | 4_2:-39824785 | None:intergenic |
ATTCTTACGATTCCATTTCT+TGG | 0.235108 | 4_2:-39821552 | None:intergenic |
TACCCTATCAAAATTTCTTT+TGG | 0.236014 | 4_2:+39826800 | Msa0599690:three_prime_UTR |
CTCCCACCGCGTCCAGAAAT+TGG | 0.236347 | 4_2:+39822725 | Msa0599690:CDS |
TTCTAAGAGGATTAATTATA+AGG | 0.239510 | 4_2:+39826720 | Msa0599690:three_prime_UTR |
TTGAGCTTCAAGACTAATAA+TGG | 0.252984 | 4_2:+39825856 | Msa0599690:three_prime_UTR |
ATGTTGCTCTGGCTTGAATT+TGG | 0.258103 | 4_2:-39825481 | None:intergenic |
AGGTGGTGAGGAACTTAATT+AGG | 0.263635 | 4_2:+39826647 | Msa0599690:three_prime_UTR |
CCGCGTCCAGAAATTGGTTT+TGG | 0.273136 | 4_2:+39822731 | Msa0599690:CDS |
AAGGAGTTAAGCAGAGAGTT+AGG | 0.279953 | 4_2:+39821750 | Msa0599690:CDS |
CCTTCCTTTGCTTGTCATCT+GGG | 0.284990 | 4_2:-39821731 | None:intergenic |
GCAGCTATGGAAGAGCTTAT+TGG | 0.288607 | 4_2:+39822963 | Msa0599690:CDS |
TTAAAGCAATGGTGTGTCTT+AGG | 0.291002 | 4_2:-39826950 | None:intergenic |
AGCCTTTGCAAGTCAAGTTT+TGG | 0.294391 | 4_2:+39821778 | Msa0599690:CDS |
CATGAAGGTGGTGCTGCTTC+TGG | 0.302796 | 4_2:+39821469 | Msa0599690:CDS |
CACAGATGGGTGATCCTCTT+TGG | 0.302834 | 4_2:+39822991 | Msa0599690:CDS |
GGCAGTTGTGGATGTGTCTT+TGG | 0.303977 | 4_2:+39823751 | Msa0599690:CDS |
TTTCGAAGCACTCGTCTTCT+CGG | 0.304296 | 4_2:-39821420 | None:intergenic |
CAGCTATGGAAGAGCTTATT+GGG | 0.306565 | 4_2:+39822964 | Msa0599690:CDS |
ATCGACTTACATTTACTCTA+AGG | 0.323318 | 4_2:-39825210 | None:intergenic |
CATTTGAAACCATTAGGTTT+AGG | 0.324939 | 4_2:-39823092 | None:intergenic |
TAGGCTTAATTTACAAGAAT+GGG | 0.331327 | 4_2:+39826666 | Msa0599690:three_prime_UTR |
GAGGATTAATTATAAGGTTC+GGG | 0.337570 | 4_2:+39826726 | Msa0599690:three_prime_UTR |
ACGATTCCATTTCTTGGATC+TGG | 0.342668 | 4_2:-39821546 | None:intergenic |
GGCGGTGAAACTGGCGGAGG+AGG | 0.346393 | 4_2:+39825670 | Msa0599690:CDS |
AAAGGGAGCAAAACCCTTGC+AGG | 0.353053 | 4_2:+39820344 | Msa0599690:five_prime_UTR |
AAAACTTGTGTTGGTGGAAC+AGG | 0.354087 | 4_2:-39824990 | None:intergenic |
GAGCTGATAACATGAGGTAT+AGG | 0.357648 | 4_2:+39821971 | Msa0599690:CDS |
GCTATGAATGTAGTTCTAAA+TGG | 0.363093 | 4_2:+39825574 | Msa0599690:CDS |
ATTGCAAATGGACGCGATAC+TGG | 0.363551 | 4_2:+39825172 | Msa0599690:CDS |
AGAGGATTAATTATAAGGTT+CGG | 0.366136 | 4_2:+39826725 | Msa0599690:three_prime_UTR |
AATGGAGTCGGCGGTGAAAC+TGG | 0.366633 | 4_2:+39825661 | Msa0599690:CDS |
CAGTGGGATATTCTTTCTAA+TGG | 0.366838 | 4_2:+39825124 | Msa0599690:intron |
GGAAGAAGTGCTACATAATC+TGG | 0.371226 | 4_2:-39825604 | None:intergenic |
GGTGAAACTGGCGGAGGAGG+GGG | 0.372896 | 4_2:+39825673 | Msa0599690:CDS |
TTAGGCTTAATTTACAAGAA+TGG | 0.378497 | 4_2:+39826665 | Msa0599690:three_prime_UTR |
ACAATACCAGGAGGTCTTCC+AGG | 0.379421 | 4_2:-39824939 | None:intergenic |
CAGAAGCAGCACCACCTTCA+TGG | 0.382160 | 4_2:-39821468 | None:intergenic |
AATACCTTTGAGTAACCATT+TGG | 0.385606 | 4_2:-39823842 | None:intergenic |
TGAAGAGGTTGCATTGCTAA+TGG | 0.395459 | 4_2:+39826611 | Msa0599690:three_prime_UTR |
AACAACATCCTGACGGGACC+TGG | 0.395943 | 4_2:+39823729 | Msa0599690:CDS |
TGGACTAATTAGATATGGTT+AGG | 0.396599 | 4_2:+39826820 | Msa0599690:three_prime_UTR |
CTCGTGAGAGTTACTTTGTA+AGG | 0.399857 | 4_2:+39823699 | Msa0599690:CDS |
AGAGAGTGGGGAACAGATAG+AGG | 0.400716 | 4_2:-39819607 | None:intergenic |
AGGTCGTTTCCTCGTGGGAT+TGG | 0.405874 | 4_2:+39823068 | Msa0599690:CDS |
GGTAGTAAGGTCATAGAGTT+AGG | 0.409823 | 4_2:-39826781 | None:intergenic |
GAAGAGGTTGCATTGCTAAT+GGG | 0.410142 | 4_2:+39826612 | Msa0599690:three_prime_UTR |
TGTGGTGGTCCAACAGCTAT+AGG | 0.411505 | 4_2:+39822024 | Msa0599690:CDS |
GTAGTATTAACATGTTGCTC+TGG | 0.413248 | 4_2:-39825492 | None:intergenic |
CAATTCTATTGCAGTTTACA+AGG | 0.413860 | 4_2:+39826587 | Msa0599690:intron |
AGAATCAAAGCTTCGCTGTC+TGG | 0.414774 | 4_2:+39825820 | Msa0599690:CDS |
GGGAACAGATAGAGGAAGAA+AGG | 0.415090 | 4_2:-39819599 | None:intergenic |
GCTTCGCATTTGAAACCATT+AGG | 0.415897 | 4_2:-39823098 | None:intergenic |
GTTAGCACTGGACATGCATT+TGG | 0.416621 | 4_2:+39824495 | Msa0599690:CDS |
AGATGTAGAAGAAGGCCTTC+TGG | 0.418212 | 4_2:+39823800 | Msa0599690:CDS |
AGCTTAATCCTCAACTGAAA+AGG | 0.423530 | 4_2:+39820326 | Msa0599690:five_prime_UTR |
GCTATCCTGCCTGATGGAAA+TGG | 0.423831 | 4_2:+39825637 | Msa0599690:CDS |
CAATGGTCAACGGTGTTTGC+TGG | 0.428126 | 4_2:+39823410 | Msa0599690:CDS |
TATGTAGCACTTCTTCCATC+AGG | 0.428228 | 4_2:+39825610 | Msa0599690:CDS |
CTTTGCTTGTCATCTGGGTG+TGG | 0.428946 | 4_2:-39821726 | None:intergenic |
TTAATGAAGATGAATATGTT+AGG | 0.431451 | 4_2:+39823048 | Msa0599690:CDS |
AGCTGATAACATGAGGTATA+GGG | 0.432619 | 4_2:+39821972 | Msa0599690:CDS |
TTTGATTCTAACTCTTTGAC+AGG | 0.434394 | 4_2:+39820449 | Msa0599690:five_prime_UTR |
GCTGTTGGACCACCACAATT+AGG | 0.438343 | 4_2:-39822018 | None:intergenic |
CGGTGAAACTGGCGGAGGAG+GGG | 0.441966 | 4_2:+39825672 | Msa0599690:CDS |
GGGATTGGACCTAAACCTAA+TGG | 0.443923 | 4_2:+39823083 | Msa0599690:CDS |
CATTTGATGAACATCATTTG+AGG | 0.446985 | 4_2:+39822055 | Msa0599690:CDS |
GAGGAAGAGTATGTTGAAAC+TGG | 0.447997 | 4_2:+39824794 | Msa0599690:CDS |
GGTCGGAATGTTTGTTGCCA+TGG | 0.448476 | 4_2:-39824571 | None:intergenic |
GTGTTGTCAACTGGAGTGGC+AGG | 0.448507 | 4_2:+39823461 | Msa0599690:CDS |
AATGTTTCAGTCAAACCTCT+TGG | 0.448780 | 4_2:+39821333 | Msa0599690:exon |
CTGCCTGATGGAAATGGAAA+TGG | 0.449683 | 4_2:+39825643 | Msa0599690:CDS |
CACACATGGACAACACTGTC+TGG | 0.450880 | 4_2:+39824867 | Msa0599690:CDS |
CACTCGTCTTCTCGGATTCG+AGG | 0.451326 | 4_2:-39821412 | None:intergenic |
TATTTGTTGCAGTTTCTTCA+AGG | 0.453245 | 4_2:+39821698 | Msa0599690:intron |
CCAACCGCTAAACTCTCTCT+TGG | 0.459578 | 4_2:+39825754 | Msa0599690:CDS |
TGCATTTGGTGCAAAACGTT+GGG | 0.460920 | 4_2:+39824509 | Msa0599690:CDS |
GAAGGAAGAAAGAGAGAGAG+TGG | 0.463579 | 4_2:-39819621 | None:intergenic |
GAAATGGCGCACATTGCAAA+TGG | 0.463996 | 4_2:+39825160 | Msa0599690:CDS |
ACAATCTGCTTGTATAGATT+AGG | 0.464761 | 4_2:-39824474 | None:intergenic |
CAGTCAAACCTCTTGGAAGC+TGG | 0.469434 | 4_2:+39821340 | Msa0599690:CDS |
GCTTAATCCTCAACTGAAAA+GGG | 0.469470 | 4_2:+39820327 | Msa0599690:five_prime_UTR |
TCAGCACCAGATCCAAGAAA+TGG | 0.471078 | 4_2:+39821540 | Msa0599690:CDS |
CTACATCTAGACGAAGGACT+AGG | 0.475265 | 4_2:-39823785 | None:intergenic |
TGGACAACACTGTCTGGAAC+AGG | 0.477040 | 4_2:+39824873 | Msa0599690:CDS |
ATTCTAACTCTTTGACAGGT+TGG | 0.477783 | 4_2:+39820453 | Msa0599690:five_prime_UTR |
AGGAGTTAAGCAGAGAGTTA+GGG | 0.480092 | 4_2:+39821751 | Msa0599690:CDS |
CGTAAGAGTGTTGATGATCC+TGG | 0.485185 | 4_2:+39824921 | Msa0599690:CDS |
GACATTTCACCTATAGCTGT+TGG | 0.486224 | 4_2:-39822033 | None:intergenic |
CTCTCACGAGTCGGCACAAG+AGG | 0.489363 | 4_2:-39823686 | None:intergenic |
GGAACAGATAGAGGAAGAAA+GGG | 0.490510 | 4_2:-39819598 | None:intergenic |
GTTTCAAATGCGAAGCTTCG+AGG | 0.490695 | 4_2:+39823105 | Msa0599690:CDS |
ACAACTGCCCAGGTCCCGTC+AGG | 0.492368 | 4_2:-39823737 | None:intergenic |
GCAGACACAACATGAACGTT+CGG | 0.496911 | 4_2:+39821912 | Msa0599690:intron |
ATGTTTGAATAGTTTACCAC+TGG | 0.497257 | 4_2:-39822692 | None:intergenic |
GCGGTGAAACTGGCGGAGGA+GGG | 0.500439 | 4_2:+39825671 | Msa0599690:CDS |
CATTTCCATTTCCATCAGGC+AGG | 0.501486 | 4_2:-39825642 | None:intergenic |
GTCAACATTTAATATACCTA+GGG | 0.503569 | 4_2:-39826759 | None:intergenic |
AAGGAAGAAAGAGAGAGAGT+GGG | 0.503955 | 4_2:-39819620 | None:intergenic |
ACTCCATTTCCATTTCCATC+AGG | 0.505159 | 4_2:-39825646 | None:intergenic |
ATATATACCGCCAACATCTA+CGG | 0.505453 | 4_2:-39824592 | None:intergenic |
ATGTTAGGTCGTTTCCTCGT+GGG | 0.513468 | 4_2:+39823063 | Msa0599690:CDS |
TTTCTTGCGTATAACCTGCA+AGG | 0.514789 | 4_2:-39820358 | None:intergenic |
GATGATCCTGGAAGACCTCC+TGG | 0.514883 | 4_2:+39824933 | Msa0599690:CDS |
CATTTAATTGTTACTATGTG+AGG | 0.515797 | 4_2:+39826921 | Msa0599690:three_prime_UTR |
GCTTATTGGGATGGCACAGA+TGG | 0.516003 | 4_2:+39822977 | Msa0599690:CDS |
CTCATTTGTTATCTATGCAC+CGG | 0.516034 | 4_2:+39825540 | Msa0599690:CDS |
GAGAGTGTAACAGATGCAAC+AGG | 0.516631 | 4_2:+39825517 | Msa0599690:CDS |
TGACGGGACCTGGGCAGTTG+TGG | 0.518596 | 4_2:+39823739 | Msa0599690:CDS |
TTAATTCAAGAGATGCCAAA+TGG | 0.518826 | 4_2:+39823827 | Msa0599690:CDS |
ACTGTGGAAGTGTTGTCAAC+TGG | 0.520701 | 4_2:+39823452 | Msa0599690:CDS |
AACCAAAACTTGACTTGCAA+AGG | 0.523378 | 4_2:-39821780 | None:intergenic |
AGAACAGTAGCAGCTCCATC+AGG | 0.525133 | 4_2:-39823026 | None:intergenic |
CAGCAAACACCGTTGACCAT+TGG | 0.528564 | 4_2:-39823409 | None:intergenic |
TACAAGCAGATTGTTAGCAC+TGG | 0.528579 | 4_2:+39824483 | Msa0599690:CDS |
AAACAAAAGGACTCAGATGA+AGG | 0.533633 | 4_2:+39821806 | Msa0599690:CDS |
TTCTTGCGTATAACCTGCAA+GGG | 0.534308 | 4_2:-39820357 | None:intergenic |
CAAAATACGTCAATATCACT+TGG | 0.538257 | 4_2:-39827030 | None:intergenic |
GCCTAGGCTAAACAAAAGAC+TGG | 0.540458 | 4_2:-39826882 | None:intergenic |
GTTGAAACTGGCAGAGAGAA+TGG | 0.540573 | 4_2:+39824806 | Msa0599690:CDS |
GAAAGGTTAGAAGAAAGAAA+CGG | 0.541656 | 4_2:-39819669 | None:intergenic |
CCAAAACCAATTTCTGGACG+CGG | 0.541993 | 4_2:-39822731 | None:intergenic |
TGCAGTTTACAAGGATGAAG+AGG | 0.543194 | 4_2:+39826596 | Msa0599690:intron |
TGGTGGAGTTGTGCAAGAAA+TGG | 0.544913 | 4_2:+39825144 | Msa0599690:CDS |
TCTGAAAAGCGACGGTCAGA+AGG | 0.545806 | 4_2:-39825714 | None:intergenic |
TTTGCATCATCTCTAATGGA+TGG | 0.546858 | 4_2:-39821369 | None:intergenic |
GAAGACGAGTGCTTCGAAAG+TGG | 0.546911 | 4_2:+39821424 | Msa0599690:CDS |
TAGTGATAACAAACCAAGAA+GGG | 0.547679 | 4_2:+39824772 | Msa0599690:intron |
AACATTCCGACCGTAGATGT+TGG | 0.548785 | 4_2:+39824582 | Msa0599690:CDS |
TCTGGACGCGGTGGGAGAGA+TGG | 0.548949 | 4_2:-39822719 | None:intergenic |
ATACTTCAAAACTAAAGCCT+AGG | 0.549257 | 4_2:-39826898 | None:intergenic |
TAACTCTTTGACAGGTTGGT+AGG | 0.549333 | 4_2:+39820457 | Msa0599690:five_prime_UTR |
AGGAAGAAAGAGAGAGAGTG+GGG | 0.550231 | 4_2:-39819619 | None:intergenic |
CTTTAGATCGACAATGTGAA+AGG | 0.551620 | 4_2:+39824538 | Msa0599690:CDS |
TTAGTGATAACAAACCAAGA+AGG | 0.552241 | 4_2:+39824771 | Msa0599690:intron |
ACATGTAGAAGTGGATGAGA+GGG | 0.555176 | 4_2:+39824446 | Msa0599690:CDS |
GGTCAACATTTAATATACCT+AGG | 0.556594 | 4_2:-39826760 | None:intergenic |
TGGTTAAGTACTACACCTGA+TGG | 0.558663 | 4_2:+39823011 | Msa0599690:CDS |
TACATCTAGACGAAGGACTA+GGG | 0.561257 | 4_2:-39823784 | None:intergenic |
TTTCAAATGCGAAGCTTCGA+GGG | 0.561654 | 4_2:+39823106 | Msa0599690:CDS |
TGGGATATTCTTTCTAATGG+TGG | 0.562144 | 4_2:+39825127 | Msa0599690:CDS |
CTTGGATCTGGTGCTGAGTG+TGG | 0.562215 | 4_2:-39821534 | None:intergenic |
AGACACATCCACAACTGCCC+AGG | 0.563303 | 4_2:-39823747 | None:intergenic |
AAGAGGTTGCATTGCTAATG+GGG | 0.565195 | 4_2:+39826613 | Msa0599690:three_prime_UTR |
TTCATAGCAACTATATCTAC+CGG | 0.565561 | 4_2:-39825559 | None:intergenic |
GGCAGGATAGCAAATCCTGA+TGG | 0.565913 | 4_2:-39825625 | None:intergenic |
ATGCATTTGGTGCAAAACGT+TGG | 0.567718 | 4_2:+39824508 | Msa0599690:CDS |
CAACCTTGTTGAGATTCTCA+TGG | 0.570569 | 4_2:+39823157 | Msa0599690:CDS |
ATAATGAGAAATTAAAGCAA+TGG | 0.575101 | 4_2:-39826961 | None:intergenic |
ATTTGAGGCTTGAAAATGCA+AGG | 0.576070 | 4_2:+39822070 | Msa0599690:CDS |
CCAAGAGAGAGTTTAGCGGT+TGG | 0.578033 | 4_2:-39825754 | None:intergenic |
TGTTGAGATTCTCATGGATG+TGG | 0.578448 | 4_2:+39823163 | Msa0599690:CDS |
ACAACATCCTGACGGGACCT+GGG | 0.580233 | 4_2:+39823730 | Msa0599690:CDS |
ACTCGTCTTCTCGGATTCGA+GGG | 0.584124 | 4_2:-39821411 | None:intergenic |
AACATGTAGAAGTGGATGAG+AGG | 0.585664 | 4_2:+39824445 | Msa0599690:CDS |
CATGTAGAAGTGGATGAGAG+GGG | 0.587323 | 4_2:+39824447 | Msa0599690:CDS |
GCCAACATATATAGGTGACA+TGG | 0.588457 | 4_2:+39824418 | Msa0599690:intron |
TATGTTAGGTCGTTTCCTCG+TGG | 0.589599 | 4_2:+39823062 | Msa0599690:CDS |
AATACGTCAATATCACTTGG+AGG | 0.592070 | 4_2:-39827027 | None:intergenic |
GATGGAAATGGAAATGGAGT+CGG | 0.592474 | 4_2:+39825649 | Msa0599690:CDS |
CTTATTGGGATGGCACAGAT+GGG | 0.593281 | 4_2:+39822978 | Msa0599690:CDS |
CTTCGTCTAGATGTAGAAGA+AGG | 0.594581 | 4_2:+39823792 | Msa0599690:CDS |
GGATTTGCTATCCTGCCTGA+TGG | 0.594655 | 4_2:+39825631 | Msa0599690:CDS |
CATTTAGAACCAATGGTCAA+CGG | 0.597017 | 4_2:+39823400 | Msa0599690:intron |
GTGCTTCAACAGCACACACA+TGG | 0.598437 | 4_2:+39824853 | Msa0599690:CDS |
ACGAGTCGGCACAAGAGGTG+AGG | 0.599970 | 4_2:-39823681 | None:intergenic |
ATTGTAAACAACATCCTGAC+GGG | 0.600101 | 4_2:+39823723 | Msa0599690:CDS |
CCCAGATGACAAGCAAAGGA+AGG | 0.600252 | 4_2:+39821731 | Msa0599690:CDS |
GATGCCAAATGGTTACTCAA+AGG | 0.601554 | 4_2:+39823838 | Msa0599690:CDS |
CTGAAAAGCGACGGTCAGAA+GGG | 0.602407 | 4_2:-39825713 | None:intergenic |
TGTTTCAAGAGCTGTGACTG+TGG | 0.603466 | 4_2:+39823436 | Msa0599690:CDS |
AGGCTTAATTTACAAGAATG+GGG | 0.603574 | 4_2:+39826667 | Msa0599690:three_prime_UTR |
TGAAAGGCTTGCTAGCTCCA+TGG | 0.610773 | 4_2:+39824554 | Msa0599690:CDS |
TATGGAAGAGCTTATTGGGA+TGG | 0.613912 | 4_2:+39822968 | Msa0599690:CDS |
AACCAATATCTGAAAAGCGA+CGG | 0.616052 | 4_2:-39825722 | None:intergenic |
AAATGCAAGGCTAAGAGAAG+AGG | 0.619130 | 4_2:+39822083 | Msa0599690:CDS |
CCAACATATATAGGTGACAT+GGG | 0.619612 | 4_2:+39824419 | Msa0599690:intron |
AAACCAATTTCTGGACGCGG+TGG | 0.619643 | 4_2:-39822728 | None:intergenic |
TGATCCAAGAGAGAGTTTAG+CGG | 0.620008 | 4_2:-39825758 | None:intergenic |
CACACCCAGATGACAAGCAA+AGG | 0.622325 | 4_2:+39821727 | Msa0599690:CDS |
GTCGGCGGTGAAACTGGCGG+AGG | 0.626051 | 4_2:+39825667 | Msa0599690:CDS |
GCTGCTTCTGGTGAAGAACA+AGG | 0.627125 | 4_2:+39821481 | Msa0599690:CDS |
TCTTGAATTAAGCAACCAGA+AGG | 0.628017 | 4_2:-39823815 | None:intergenic |
CGAGTCGGCACAAGAGGTGA+GGG | 0.629753 | 4_2:-39823680 | None:intergenic |
CGTCATCACTCTCACATCAT+CGG | 0.631515 | 4_2:-39824898 | None:intergenic |
TCCTGCAGTGAAAACCATGA+AGG | 0.632264 | 4_2:+39821454 | Msa0599690:CDS |
TTCGGGAATTGACTTCCCCT+AGG | 0.632649 | 4_2:+39826743 | Msa0599690:three_prime_UTR |
AACCAATTTCTGGACGCGGT+GGG | 0.632731 | 4_2:-39822727 | None:intergenic |
ATTCCGACCGTAGATGTTGG+CGG | 0.634409 | 4_2:+39824585 | Msa0599690:CDS |
ATGGGTTGAACATGTAGAAG+TGG | 0.635474 | 4_2:+39824437 | Msa0599690:CDS |
ATGAATGTAGTTCTAAATGG+AGG | 0.639925 | 4_2:+39825577 | Msa0599690:CDS |
CTACAATGGTGCATTACAAG+TGG | 0.640429 | 4_2:+39823487 | Msa0599690:CDS |
TATTGTAAACAACATCCTGA+CGG | 0.640849 | 4_2:+39823722 | Msa0599690:CDS |
TGTTGTCAACTGGAGTGGCA+GGG | 0.641410 | 4_2:+39823462 | Msa0599690:CDS |
GGAGTCGGCGGTGAAACTGG+CGG | 0.641968 | 4_2:+39825664 | Msa0599690:CDS |
GCTTCATGTCCTAATTGTGG+TGG | 0.643891 | 4_2:+39822009 | Msa0599690:CDS |
GGATCTGGTGCTGAGTGTGG+CGG | 0.645442 | 4_2:-39821531 | None:intergenic |
ACAAAGTAACTCTCACGAGT+CGG | 0.646006 | 4_2:-39823695 | None:intergenic |
AGCTTAGAGCTGATAACATG+AGG | 0.647699 | 4_2:+39821965 | Msa0599690:CDS |
ACGATGGCAGCGAAGTACGT+AGG | 0.649514 | 4_2:+39822665 | Msa0599690:CDS |
GCAGCACTAAGAACAATACC+AGG | 0.650728 | 4_2:-39824951 | None:intergenic |
GTGAGAAAGAGTAGCAACGT+TGG | 0.653963 | 4_2:+39820405 | Msa0599690:five_prime_UTR |
GGTGTAGTACTTAACCAAAG+AGG | 0.657817 | 4_2:-39823005 | None:intergenic |
AATGCTTCATGTCCTAATTG+TGG | 0.661151 | 4_2:+39822006 | Msa0599690:CDS |
TGATAACAAACCAAGAAGGG+AGG | 0.664902 | 4_2:+39824775 | Msa0599690:CDS |
GGAACTGACCAGCTTCCAAG+AGG | 0.667277 | 4_2:-39821348 | None:intergenic |
GATTGATAGAATTTCAACGA+TGG | 0.671483 | 4_2:+39822649 | Msa0599690:intron |
GGAAGTGTTGTCAACTGGAG+TGG | 0.673358 | 4_2:+39823457 | Msa0599690:CDS |
GGAGTGGCAGGGAACTACAA+TGG | 0.679417 | 4_2:+39823473 | Msa0599690:CDS |
CATCCATGAGAATCTCAACA+AGG | 0.687534 | 4_2:-39823160 | None:intergenic |
ATACCGCCAACATCTACGGT+CGG | 0.690999 | 4_2:-39824588 | None:intergenic |
TAATGAGAACTCCAGAACTG+AGG | 0.692979 | 4_2:+39825025 | Msa0599690:CDS |
GGAAATGGAAATGGAGTCGG+CGG | 0.694782 | 4_2:+39825652 | Msa0599690:CDS |
TGCAGTGAAAACCATGAAGG+TGG | 0.700352 | 4_2:+39821457 | Msa0599690:CDS |
TCAACATTTAATATACCTAG+GGG | 0.717489 | 4_2:-39826758 | None:intergenic |
CTTCTTCTACATCTAGACGA+AGG | 0.725595 | 4_2:-39823791 | None:intergenic |
GAAGTACGTAGGAAAGCCAG+TGG | 0.728972 | 4_2:+39822676 | Msa0599690:CDS |
GGTTTAGGTCCAATCCCACG+AGG | 0.756148 | 4_2:-39823077 | None:intergenic |
GCACTAAGAACAATACCAGG+AGG | 0.759585 | 4_2:-39824948 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTTTTATATTTTTA+TGG | + | chr4_2:39819924-39819943 | Msa0599690:intron | 0.0% |
!!! | ATTTTTTTTTATATTTTTAT+GGG | + | chr4_2:39819925-39819944 | Msa0599690:intron | 0.0% |
!! | AAATAATTTATAATATTATA+TGG | - | chr4_2:39821240-39821259 | None:intergenic | 0.0% |
!! | TAACATATTTACTTAAAAAT+AGG | + | chr4_2:39820059-39820078 | Msa0599690:intron | 10.0% |
!!! | TTTTTATTTATGTTGTAATA+AGG | - | chr4_2:39821084-39821103 | None:intergenic | 10.0% |
!! | AAAAATAATGTAAAAGAAAT+GGG | - | chr4_2:39824628-39824647 | None:intergenic | 10.0% |
!! | TAAAAATAATGTAAAAGAAA+TGG | - | chr4_2:39824629-39824648 | None:intergenic | 10.0% |
!!! | TTGATATATCATAAATTTTA+AGG | - | chr4_2:39824734-39824753 | None:intergenic | 10.0% |
!! | TCAAATAGAAAATATAATAA+CGG | - | chr4_2:39825402-39825421 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAAAAAAGAC+TGG | - | chr4_2:39826847-39826866 | None:intergenic | 10.0% |
!!! | CTTTTTTTTTTTTTTTTTTG+AGG | + | chr4_2:39826849-39826868 | Msa0599690:three_prime_UTR | 10.0% |
!!! | ATTATTTTGTTCTGTAAAAA+AGG | + | chr4_2:39820142-39820161 | Msa0599690:intron | 15.0% |
!! | AGAAAGAAAATATATTGTTT+AGG | - | chr4_2:39820183-39820202 | None:intergenic | 15.0% |
!!! | TATGTATTTATTTTTCTTCT+AGG | + | chr4_2:39820266-39820285 | Msa0599690:intron | 15.0% |
!! | TTCAGTCAAAAATAAATAAA+GGG | - | chr4_2:39820576-39820595 | None:intergenic | 15.0% |
!! | TTTCAGTCAAAAATAAATAA+AGG | - | chr4_2:39820577-39820596 | None:intergenic | 15.0% |
!! | AGAGAAAAATTAAAAAAAGT+TGG | + | chr4_2:39821193-39821212 | Msa0599690:intron | 15.0% |
!! | ATTATAGTAATCAAGATATT+TGG | + | chr4_2:39824285-39824304 | Msa0599690:intron | 15.0% |
!!! | AAATTTGAGATAAATCATTA+TGG | + | chr4_2:39825948-39825967 | Msa0599690:intron | 15.0% |
!!! | TGGTTTTTTGTTTTTTTCTA+GGG | + | chr4_2:39819993-39820012 | Msa0599690:intron | 20.0% |
!! | CATTCATAGAGAAATATATA+TGG | + | chr4_2:39820211-39820230 | Msa0599690:intron | 20.0% |
!! | TCAGTCAAAAATAAATAAAG+GGG | - | chr4_2:39820575-39820594 | None:intergenic | 20.0% |
!!! | TTATTTTAATTGCAAAGTCA+AGG | + | chr4_2:39820702-39820721 | Msa0599690:intron | 20.0% |
!!! | TATTTTAATTGCAAAGTCAA+GGG | + | chr4_2:39820703-39820722 | Msa0599690:intron | 20.0% |
!!! | TTTTTCTTTTTCCTCTTTTA+TGG | - | chr4_2:39820848-39820867 | None:intergenic | 20.0% |
!! | ATATTATATGGTAAACAAAC+TGG | - | chr4_2:39821228-39821247 | None:intergenic | 20.0% |
!! | GAGAAAATACTAGTATAATA+TGG | + | chr4_2:39821625-39821644 | Msa0599690:intron | 20.0% |
!!! | ATAATAAAATGAGAGTACAA+AGG | + | chr4_2:39822187-39822206 | Msa0599690:intron | 20.0% |
!!! | TGATTTTAAGCTACTTTTAT+AGG | - | chr4_2:39822226-39822245 | None:intergenic | 20.0% |
!! | GCTTCTCTTTATAAATTTAA+TGG | + | chr4_2:39822466-39822485 | Msa0599690:intron | 20.0% |
!! | CTCTTTATAAATTTAATGGT+CGG | + | chr4_2:39822470-39822489 | Msa0599690:intron | 20.0% |
!! | AGAAAATGGAAAATAAGAAA+GGG | - | chr4_2:39822561-39822580 | None:intergenic | 20.0% |
!! | AAGAAAATGGAAAATAAGAA+AGG | - | chr4_2:39822562-39822581 | None:intergenic | 20.0% |
!!! | TTTCCATTTTCTTTGTATAA+TGG | + | chr4_2:39822569-39822588 | Msa0599690:intron | 20.0% |
!! | TTAATGAAGATGAATATGTT+AGG | + | chr4_2:39823048-39823067 | Msa0599690:CDS | 20.0% |
!!! | ATATCATGTCATTTATATTG+CGG | + | chr4_2:39823264-39823283 | Msa0599690:intron | 20.0% |
!! | CAATTACAGTTGTAATATAA+AGG | - | chr4_2:39823319-39823338 | None:intergenic | 20.0% |
!! | AAAATTAATGAGAAGAAACA+TGG | + | chr4_2:39823615-39823634 | Msa0599690:intron | 20.0% |
!!! | TTTAACCTTTTAAATAACAG+TGG | + | chr4_2:39825107-39825126 | Msa0599690:intron | 20.0% |
!!! | TTAACCTTTTAAATAACAGT+GGG | + | chr4_2:39825108-39825127 | Msa0599690:intron | 20.0% |
!! | TTTAAATTACTGATGTAGTT+AGG | + | chr4_2:39825249-39825268 | Msa0599690:intron | 20.0% |
!!! | AACTGGAAAATTTTCAATAT+AGG | - | chr4_2:39825913-39825932 | None:intergenic | 20.0% |
!! | TTTCACTAAAAATAACTAAC+TGG | - | chr4_2:39825930-39825949 | None:intergenic | 20.0% |
!!! | ACTTTTATAATCGAGTTATA+GGG | + | chr4_2:39826353-39826372 | Msa0599690:intron | 20.0% |
!!! | TTCTAAGAGGATTAATTATA+AGG | + | chr4_2:39826720-39826739 | Msa0599690:three_prime_UTR | 20.0% |
!! | ATAATGAGAAATTAAAGCAA+TGG | - | chr4_2:39826964-39826983 | None:intergenic | 20.0% |
! | ATGGGAATAAAAAAAGTGAA+AGG | - | chr4_2:39819689-39819708 | None:intergenic | 25.0% |
! | CTTCTTTAATCATTCATTTC+TGG | + | chr4_2:39819787-39819806 | Msa0599690:five_prime_UTR | 25.0% |
! | TGGAAAATAAACTTATCACA+AGG | - | chr4_2:39819972-39819991 | None:intergenic | 25.0% |
! | AGAAAAAAACAAAAAACCAC+TGG | - | chr4_2:39819992-39820011 | None:intergenic | 25.0% |
!!! | GTGGTTTTTTGTTTTTTTCT+AGG | + | chr4_2:39819992-39820011 | Msa0599690:intron | 25.0% |
!!! | TTTTTGTTTTTTTCTAGGGT+TGG | + | chr4_2:39819997-39820016 | Msa0599690:intron | 25.0% |
! | TAGAAAAAGACTTGAAGAAA+AGG | - | chr4_2:39820508-39820527 | None:intergenic | 25.0% |
!! | AATAAAGGGGAATTTAAGAT+GGG | - | chr4_2:39820562-39820581 | None:intergenic | 25.0% |
! | AAATAAAGGGGAATTTAAGA+TGG | - | chr4_2:39820563-39820582 | None:intergenic | 25.0% |
! | TTCTATTTATTGTTCCAATG+AGG | + | chr4_2:39820750-39820769 | Msa0599690:intron | 25.0% |
!! | GTTATCTTTTTCCATAAAAG+AGG | + | chr4_2:39820834-39820853 | Msa0599690:intron | 25.0% |
! | CAGAAATTTATTTACAAAGC+TGG | - | chr4_2:39820895-39820914 | None:intergenic | 25.0% |
! | ATCAAAAAATGTTACTGTCA+TGG | - | chr4_2:39820933-39820952 | None:intergenic | 25.0% |
!!! | AATAAGGCTACTTTTTTTAG+AGG | - | chr4_2:39821068-39821087 | None:intergenic | 25.0% |
! | TAGTTTGAAAAACTACAACA+AGG | + | chr4_2:39821266-39821285 | Msa0599690:intron | 25.0% |
!! | AAAAACTTGATGGTAACATA+GGG | - | chr4_2:39821584-39821603 | None:intergenic | 25.0% |
!! | AAAAAACTTGATGGTAACAT+AGG | - | chr4_2:39821585-39821604 | None:intergenic | 25.0% |
! | ATGAAGGAAAAAAAACTTGA+TGG | - | chr4_2:39821594-39821613 | None:intergenic | 25.0% |
!!! | AGTTTTGGTTTCAAAACAAA+AGG | + | chr4_2:39821793-39821812 | Msa0599690:CDS | 25.0% |
! | ACAAGAAAAGATAGAGAAAA+TGG | - | chr4_2:39822147-39822166 | None:intergenic | 25.0% |
! | TTATTTAACCCTAAGTCTTT+AGG | - | chr4_2:39822275-39822294 | None:intergenic | 25.0% |
! | TCTAAAAGTAATGGTTGTTA+TGG | - | chr4_2:39822438-39822457 | None:intergenic | 25.0% |
! | GTTCCATTATACAAAGAAAA+TGG | - | chr4_2:39822575-39822594 | None:intergenic | 25.0% |
!!! | ATATTCTAAGGTCAATTAGT+GGG | + | chr4_2:39822798-39822817 | Msa0599690:intron | 25.0% |
! | ATGCACACTTAAATTCATAA+GGG | - | chr4_2:39823246-39823265 | None:intergenic | 25.0% |
! | TATGCACACTTAAATTCATA+AGG | - | chr4_2:39823247-39823266 | None:intergenic | 25.0% |
! | TTTATATTGCGGCAAAATTA+TGG | + | chr4_2:39823275-39823294 | Msa0599690:intron | 25.0% |
!! | CATACTGCAATTTAAAATCA+TGG | + | chr4_2:39823347-39823366 | Msa0599690:intron | 25.0% |
! | TTAAAACGAGGTTAAATACA+CGG | - | chr4_2:39823577-39823596 | None:intergenic | 25.0% |
! | CTATTTAACGTATTAAAACG+AGG | - | chr4_2:39823589-39823608 | None:intergenic | 25.0% |
!! | TTTAAAATGTAACCTTCGTT+TGG | + | chr4_2:39823932-39823951 | Msa0599690:intron | 25.0% |
! | CATAAATACCACTATTATGT+CGG | - | chr4_2:39824163-39824182 | None:intergenic | 25.0% |
! | TATCTAAGTGATAAGATGAT+TGG | - | chr4_2:39824239-39824258 | None:intergenic | 25.0% |
! | TAATGTTTGCCAACATATAT+AGG | + | chr4_2:39824410-39824429 | Msa0599690:intron | 25.0% |
! | ATATATCAAGTGTTATCATG+TGG | + | chr4_2:39824745-39824764 | Msa0599690:intron | 25.0% |
! | AGAAATTCAAAAACTTGTGT+TGG | - | chr4_2:39825002-39825021 | None:intergenic | 25.0% |
!!! | TGAGGTAATGTTTTTTACAT+AGG | + | chr4_2:39825043-39825062 | Msa0599690:intron | 25.0% |
!! | ATATCCCACTGTTATTTAAA+AGG | - | chr4_2:39825115-39825134 | None:intergenic | 25.0% |
!! | TTTGACAATCTGAAACTTAT+CGG | + | chr4_2:39825417-39825436 | Msa0599690:intron | 25.0% |
!!! | AAGACTAATAATGGATTTTG+AGG | + | chr4_2:39825865-39825884 | Msa0599690:three_prime_UTR | 25.0% |
! | AGAAACATATGTTAGATACA+TGG | + | chr4_2:39826012-39826031 | Msa0599690:intron | 25.0% |
!! | CTTTTATATTGCACTAAATG+CGG | + | chr4_2:39826077-39826096 | Msa0599690:intron | 25.0% |
! | AAAAACACATACATCTAACA+TGG | - | chr4_2:39826145-39826164 | None:intergenic | 25.0% |
! | GTAGTACTTCTTAAATATCA+AGG | - | chr4_2:39826173-39826192 | None:intergenic | 25.0% |
!! | AGCATTAGTAATTCAACTTT+TGG | + | chr4_2:39826224-39826243 | Msa0599690:intron | 25.0% |
! | TATACTTTCCTCAAATCATT+TGG | + | chr4_2:39826287-39826306 | Msa0599690:intron | 25.0% |
!! | GACTTTTATAATCGAGTTAT+AGG | + | chr4_2:39826352-39826371 | Msa0599690:intron | 25.0% |
!! | CTTTTATAATCGAGTTATAG+GGG | + | chr4_2:39826354-39826373 | Msa0599690:intron | 25.0% |
! | TTAGGCTTAATTTACAAGAA+TGG | + | chr4_2:39826665-39826684 | Msa0599690:three_prime_UTR | 25.0% |
! | TAGGCTTAATTTACAAGAAT+GGG | + | chr4_2:39826666-39826685 | Msa0599690:three_prime_UTR | 25.0% |
! | AGAGGATTAATTATAAGGTT+CGG | + | chr4_2:39826725-39826744 | Msa0599690:three_prime_UTR | 25.0% |
! | TCAACATTTAATATACCTAG+GGG | - | chr4_2:39826761-39826780 | None:intergenic | 25.0% |
! | GTCAACATTTAATATACCTA+GGG | - | chr4_2:39826762-39826781 | None:intergenic | 25.0% |
!! | TACCCTATCAAAATTTCTTT+TGG | + | chr4_2:39826800-39826819 | Msa0599690:three_prime_UTR | 25.0% |
!!! | GTCCAAAAGAAATTTTGATA+GGG | - | chr4_2:39826805-39826824 | None:intergenic | 25.0% |
!!! | AGTCCAAAAGAAATTTTGAT+AGG | - | chr4_2:39826806-39826825 | None:intergenic | 25.0% |
!! | TCTTTTGGACTAATTAGATA+TGG | + | chr4_2:39826815-39826834 | Msa0599690:three_prime_UTR | 25.0% |
!!! | TTTTTTTTTTGAGGGAAGTT+AGG | + | chr4_2:39826858-39826877 | Msa0599690:three_prime_UTR | 25.0% |
! | CATTTAATTGTTACTATGTG+AGG | + | chr4_2:39826921-39826940 | Msa0599690:three_prime_UTR | 25.0% |
!! | TTATAACTCTTTTCTCCTTT+AGG | + | chr4_2:39826980-39826999 | Msa0599690:intron | 25.0% |
! | TATCCATTTCAAAATCCTAA+AGG | - | chr4_2:39826998-39827017 | None:intergenic | 25.0% |
GAAAGGTTAGAAGAAAGAAA+CGG | - | chr4_2:39819672-39819691 | None:intergenic | 30.0% | |
!!! | GGTTTTGAGAAGGTTAAAAT+GGG | - | chr4_2:39819707-39819726 | None:intergenic | 30.0% |
!!! | TGGTTTTGAGAAGGTTAAAA+TGG | - | chr4_2:39819708-39819727 | None:intergenic | 30.0% |
!! | ATTTTAACCTTCTCAAAACC+AGG | + | chr4_2:39819707-39819726 | Msa0599690:five_prime_UTR | 30.0% |
ATGTAGTATCATAACTCAGA+AGG | + | chr4_2:39819841-39819860 | Msa0599690:intron | 30.0% | |
!! | GTGATAAGTTTATTTTCCAG+TGG | + | chr4_2:39819973-39819992 | Msa0599690:intron | 30.0% |
TGAATGAGAAAGAAAACGTT+AGG | + | chr4_2:39820021-39820040 | Msa0599690:intron | 30.0% | |
TTTGATTCTAACTCTTTGAC+AGG | + | chr4_2:39820449-39820468 | Msa0599690:five_prime_UTR | 30.0% | |
GGATGAAGAATTGAAGAAAA+GGG | - | chr4_2:39820540-39820559 | None:intergenic | 30.0% | |
! | ATAAAGGGGAATTTAAGATG+GGG | - | chr4_2:39820561-39820580 | None:intergenic | 30.0% |
! | TCTAATCTCATTTTCTCTCT+GGG | + | chr4_2:39820650-39820669 | Msa0599690:intron | 30.0% |
AGAAGGATATTAAACCTCAT+TGG | - | chr4_2:39820767-39820786 | None:intergenic | 30.0% | |
ATATTGCAGAAAATTGTGAG+TGG | - | chr4_2:39820974-39820993 | None:intergenic | 30.0% | |
! | TTTAGAGGAATTAGAGTACT+TGG | - | chr4_2:39821053-39821072 | None:intergenic | 30.0% |
ATTCTTACGATTCCATTTCT+TGG | - | chr4_2:39821555-39821574 | None:intergenic | 30.0% | |
TTCTCTCAAAGAAAAGATGA+AGG | - | chr4_2:39821610-39821629 | None:intergenic | 30.0% | |
! | TATTTGTTGCAGTTTCTTCA+AGG | + | chr4_2:39821698-39821717 | Msa0599690:intron | 30.0% |
!!! | GTTTTGTTTTGCTGTGTTTT+TGG | + | chr4_2:39821867-39821886 | Msa0599690:intron | 30.0% |
!!! | TTTTGCTGTGTTTTTGGTAA+AGG | + | chr4_2:39821873-39821892 | Msa0599690:intron | 30.0% |
CATTTGATGAACATCATTTG+AGG | + | chr4_2:39822055-39822074 | Msa0599690:CDS | 30.0% | |
!!! | TAAGTCTTTAGGTTTTGTTG+TGG | - | chr4_2:39822264-39822283 | None:intergenic | 30.0% |
ACAACAAAACCTAAAGACTT+AGG | + | chr4_2:39822263-39822282 | Msa0599690:intron | 30.0% | |
CAACAAAACCTAAAGACTTA+GGG | + | chr4_2:39822264-39822283 | Msa0599690:intron | 30.0% | |
! | CTTTCTCTCTCTAAAAGTAA+TGG | - | chr4_2:39822447-39822466 | None:intergenic | 30.0% |
AATGGAAAATAAGAAAGGGT+TGG | - | chr4_2:39822557-39822576 | None:intergenic | 30.0% | |
GATTGATAGAATTTCAACGA+TGG | + | chr4_2:39822649-39822668 | Msa0599690:intron | 30.0% | |
ATGTTTGAATAGTTTACCAC+TGG | - | chr4_2:39822695-39822714 | None:intergenic | 30.0% | |
!!! | AAATTGGTTTTGGCAATCAA+GGG | + | chr4_2:39822741-39822760 | Msa0599690:CDS | 30.0% |
!! | GATATTCTAAGGTCAATTAG+TGG | + | chr4_2:39822797-39822816 | Msa0599690:intron | 30.0% |
!! | TATTATTGGTTTGTCTGCTT+CGG | - | chr4_2:39822828-39822847 | None:intergenic | 30.0% |
! | CATTTGAAACCATTAGGTTT+AGG | - | chr4_2:39823095-39823114 | None:intergenic | 30.0% |
!! | TTTTTGCCATTTAGAACCAA+TGG | + | chr4_2:39823393-39823412 | Msa0599690:intron | 30.0% |
TATTGTAAACAACATCCTGA+CGG | + | chr4_2:39823722-39823741 | Msa0599690:CDS | 30.0% | |
TTAATTCAAGAGATGCCAAA+TGG | + | chr4_2:39823827-39823846 | Msa0599690:CDS | 30.0% | |
AATACCTTTGAGTAACCATT+TGG | - | chr4_2:39823845-39823864 | None:intergenic | 30.0% | |
!!! | TACATTTTAAAGCGATGATG+TGG | - | chr4_2:39823923-39823942 | None:intergenic | 30.0% |
TTTGCAAACTTGCATTTGAA+TGG | - | chr4_2:39824048-39824067 | None:intergenic | 30.0% | |
GCAAGTTTGCAAAGTAAAAA+TGG | + | chr4_2:39824055-39824074 | Msa0599690:intron | 30.0% | |
! | ACAATCTTAGTGATGATGTT+TGG | - | chr4_2:39824083-39824102 | None:intergenic | 30.0% |
! | TCAACCACAATTTAGAACTA+CGG | + | chr4_2:39824212-39824231 | Msa0599690:intron | 30.0% |
ACAATCTGCTTGTATAGATT+AGG | - | chr4_2:39824477-39824496 | None:intergenic | 30.0% | |
TTAGTGATAACAAACCAAGA+AGG | + | chr4_2:39824771-39824790 | Msa0599690:intron | 30.0% | |
TAGTGATAACAAACCAAGAA+GGG | + | chr4_2:39824772-39824791 | Msa0599690:intron | 30.0% | |
! | AGAATGGTGATAAGTTTTTG+TGG | + | chr4_2:39824822-39824841 | Msa0599690:CDS | 30.0% |
AATTCAAAAACTTGTGTTGG+TGG | - | chr4_2:39824999-39825018 | None:intergenic | 30.0% | |
AAAAAACATTACCTCAGTTC+TGG | - | chr4_2:39825039-39825058 | None:intergenic | 30.0% | |
! | ATCGACTTACATTTACTCTA+AGG | - | chr4_2:39825213-39825232 | None:intergenic | 30.0% |
AATGCAATGTAAAGATCTTG+AGG | - | chr4_2:39825348-39825367 | None:intergenic | 30.0% | |
TTCATAGCAACTATATCTAC+CGG | - | chr4_2:39825562-39825581 | None:intergenic | 30.0% | |
!! | GCTATGAATGTAGTTCTAAA+TGG | + | chr4_2:39825574-39825593 | Msa0599690:CDS | 30.0% |
!! | ATGAATGTAGTTCTAAATGG+AGG | + | chr4_2:39825577-39825596 | Msa0599690:CDS | 30.0% |
TTGAGCTTCAAGACTAATAA+TGG | + | chr4_2:39825856-39825875 | Msa0599690:three_prime_UTR | 30.0% | |
! | CATCAAATCATTTCGAGTAT+AGG | + | chr4_2:39826196-39826215 | Msa0599690:intron | 30.0% |
! | TCCTTTTATAGTCGAGTTAT+AGG | + | chr4_2:39826253-39826272 | Msa0599690:intron | 30.0% |
! | CCTTTTATAGTCGAGTTATA+GGG | + | chr4_2:39826254-39826273 | Msa0599690:intron | 30.0% |
! | CTCAAATCATTTGGAGTATA+GGG | + | chr4_2:39826296-39826315 | Msa0599690:intron | 30.0% |
! | AAAACAGGAGTACAAAAGAT+AGG | - | chr4_2:39826412-39826431 | None:intergenic | 30.0% |
CAATTCTATTGCAGTTTACA+AGG | + | chr4_2:39826587-39826606 | Msa0599690:intron | 30.0% | |
CTAATGGGGAAAAAATCAAA+AGG | + | chr4_2:39826627-39826646 | Msa0599690:three_prime_UTR | 30.0% | |
AGGCTTAATTTACAAGAATG+GGG | + | chr4_2:39826667-39826686 | Msa0599690:three_prime_UTR | 30.0% | |
GAGGATTAATTATAAGGTTC+GGG | + | chr4_2:39826726-39826745 | Msa0599690:three_prime_UTR | 30.0% | |
GGTCAACATTTAATATACCT+AGG | - | chr4_2:39826763-39826782 | None:intergenic | 30.0% | |
!! | GAAATTTTGATAGGGTAGTA+AGG | - | chr4_2:39826797-39826816 | None:intergenic | 30.0% |
TGGACTAATTAGATATGGTT+AGG | + | chr4_2:39826820-39826839 | Msa0599690:three_prime_UTR | 30.0% | |
ATACTTCAAAACTAAAGCCT+AGG | - | chr4_2:39826901-39826920 | None:intergenic | 30.0% | |
!!! | TCTCCTTTAGGATTTTGAAA+TGG | + | chr4_2:39826992-39827011 | Msa0599690:intron | 30.0% |
CAAAATACGTCAATATCACT+TGG | - | chr4_2:39827033-39827052 | None:intergenic | 30.0% | |
TGAAAAAAGAAGAGAGATCC+TGG | - | chr4_2:39819728-39819747 | None:intergenic | 35.0% | |
TTGCAAAATGAGACTAAGCT+AGG | + | chr4_2:39819888-39819907 | Msa0599690:intron | 35.0% | |
TGCAAAATGAGACTAAGCTA+GGG | + | chr4_2:39819889-39819908 | Msa0599690:intron | 35.0% | |
AGCTTAATCCTCAACTGAAA+AGG | + | chr4_2:39820326-39820345 | Msa0599690:five_prime_UTR | 35.0% | |
GCTTAATCCTCAACTGAAAA+GGG | + | chr4_2:39820327-39820346 | Msa0599690:five_prime_UTR | 35.0% | |
ATTCTAACTCTTTGACAGGT+TGG | + | chr4_2:39820453-39820472 | Msa0599690:five_prime_UTR | 35.0% | |
GGGATGAAGAATTGAAGAAA+AGG | - | chr4_2:39820541-39820560 | None:intergenic | 35.0% | |
GAGAAAATGAGATTAGAGAG+TGG | - | chr4_2:39820647-39820666 | None:intergenic | 35.0% | |
! | CTCTAATCTCATTTTCTCTC+TGG | + | chr4_2:39820649-39820668 | Msa0599690:intron | 35.0% |
!! | GTGTATTTAGAGTATCGAGA+AGG | - | chr4_2:39820784-39820803 | None:intergenic | 35.0% |
TGAAAAACTACAACAAGGCT+TGG | + | chr4_2:39821271-39821290 | Msa0599690:five_prime_UTR | 35.0% | |
GAAAAACTACAACAAGGCTT+GGG | + | chr4_2:39821272-39821291 | Msa0599690:five_prime_UTR | 35.0% | |
AATGTTTCAGTCAAACCTCT+TGG | + | chr4_2:39821333-39821352 | Msa0599690:exon | 35.0% | |
TTTGCATCATCTCTAATGGA+TGG | - | chr4_2:39821372-39821391 | None:intergenic | 35.0% | |
! | GTGTTTTGCATCATCTCTAA+TGG | - | chr4_2:39821376-39821395 | None:intergenic | 35.0% |
!! | CGGTGATAACGTTTTCTTTT+GGG | - | chr4_2:39821514-39821533 | None:intergenic | 35.0% |
!! | AACCAAAACTTGACTTGCAA+AGG | - | chr4_2:39821783-39821802 | None:intergenic | 35.0% |
AAACAAAAGGACTCAGATGA+AGG | + | chr4_2:39821806-39821825 | Msa0599690:CDS | 35.0% | |
!!! | TGTGTTTTTGGTAAAGGAGT+TGG | + | chr4_2:39821879-39821898 | Msa0599690:intron | 35.0% |
AGCTGATAACATGAGGTATA+GGG | + | chr4_2:39821972-39821991 | Msa0599690:CDS | 35.0% | |
AATGCTTCATGTCCTAATTG+TGG | + | chr4_2:39822006-39822025 | Msa0599690:CDS | 35.0% | |
! | ATTTGAGGCTTGAAAATGCA+AGG | + | chr4_2:39822070-39822089 | Msa0599690:CDS | 35.0% |
! | GCAGTTTCTTTAGAAGGATA+TGG | - | chr4_2:39822350-39822369 | None:intergenic | 35.0% |
ATGAGTGCAGTTTCTTTAGA+AGG | - | chr4_2:39822356-39822375 | None:intergenic | 35.0% | |
CATAGAACTCAGATACTCTA+CGG | + | chr4_2:39822395-39822414 | Msa0599690:intron | 35.0% | |
!! | AAAGGGTTGGTATTCATTTG+TGG | - | chr4_2:39822544-39822563 | None:intergenic | 35.0% |
TGATTGCCAAAACCAATTTC+TGG | - | chr4_2:39822740-39822759 | None:intergenic | 35.0% | |
!!! | GAAATTGGTTTTGGCAATCA+AGG | + | chr4_2:39822740-39822759 | Msa0599690:CDS | 35.0% |
ATTGGTACTATGGACATGTA+TGG | + | chr4_2:39822764-39822783 | Msa0599690:intron | 35.0% | |
! | AGGGTGAACAAAGTACTATA+TGG | - | chr4_2:39823227-39823246 | None:intergenic | 35.0% |
! | CATTTAGAACCAATGGTCAA+CGG | + | chr4_2:39823400-39823419 | Msa0599690:intron | 35.0% |
! | ATTTCCGTCGCTAATTTTGT+TGG | + | chr4_2:39823545-39823564 | Msa0599690:intron | 35.0% |
AGAACCAACAAAATTAGCGA+CGG | - | chr4_2:39823552-39823571 | None:intergenic | 35.0% | |
ATTGTAAACAACATCCTGAC+GGG | + | chr4_2:39823723-39823742 | Msa0599690:CDS | 35.0% | |
TCTTGAATTAAGCAACCAGA+AGG | - | chr4_2:39823818-39823837 | None:intergenic | 35.0% | |
CTTATGTTGCGAACATATTG+CGG | + | chr4_2:39824122-39824141 | Msa0599690:intron | 35.0% | |
TGAGTTATCCGACATAATAG+TGG | + | chr4_2:39824152-39824171 | Msa0599690:intron | 35.0% | |
CCAACATATATAGGTGACAT+GGG | + | chr4_2:39824419-39824438 | Msa0599690:intron | 35.0% | |
CTTTAGATCGACAATGTGAA+AGG | + | chr4_2:39824538-39824557 | Msa0599690:CDS | 35.0% | |
! | ATGGTGATAAGTTTTTGTGG+TGG | + | chr4_2:39824825-39824844 | Msa0599690:CDS | 35.0% |
!! | TTAGTGCTGCTACTTCTTTT+TGG | + | chr4_2:39824964-39824983 | Msa0599690:CDS | 35.0% |
CAGTGGGATATTCTTTCTAA+TGG | + | chr4_2:39825124-39825143 | Msa0599690:intron | 35.0% | |
TGGGATATTCTTTCTAATGG+TGG | + | chr4_2:39825127-39825146 | Msa0599690:CDS | 35.0% | |
TAGAAAAATGCAAGAGAGTG+CGG | + | chr4_2:39825290-39825309 | Msa0599690:intron | 35.0% | |
GTAGTATTAACATGTTGCTC+TGG | - | chr4_2:39825495-39825514 | None:intergenic | 35.0% | |
!! | CTCATTTGTTATCTATGCAC+CGG | + | chr4_2:39825540-39825559 | Msa0599690:CDS | 35.0% |
AACCAATATCTGAAAAGCGA+CGG | - | chr4_2:39825725-39825744 | None:intergenic | 35.0% | |
CCCTATAACTCGACTATAAA+AGG | - | chr4_2:39826257-39826276 | None:intergenic | 35.0% | |
CCTATACTCCAAATGATTTG+AGG | - | chr4_2:39826298-39826317 | None:intergenic | 35.0% | |
! | CCTCAAATCATTTGGAGTAT+AGG | + | chr4_2:39826295-39826314 | Msa0599690:intron | 35.0% |
GTTAGTGTTTCGTCTATTGA+CGG | + | chr4_2:39826384-39826403 | Msa0599690:intron | 35.0% | |
AGAACACAAGAATGCAAAAC+AGG | - | chr4_2:39826427-39826446 | None:intergenic | 35.0% | |
ATGGGGAAAAAATCAAAAGG+TGG | + | chr4_2:39826630-39826649 | Msa0599690:three_prime_UTR | 35.0% | |
GAAAAAATCAAAAGGTGGTG+AGG | + | chr4_2:39826635-39826654 | Msa0599690:three_prime_UTR | 35.0% | |
! | CTTGCAAGATCTTTTCTAAG+AGG | + | chr4_2:39826707-39826726 | Msa0599690:three_prime_UTR | 35.0% |
TTAAAGCAATGGTGTGTCTT+AGG | - | chr4_2:39826953-39826972 | None:intergenic | 35.0% | |
AATACGTCAATATCACTTGG+AGG | - | chr4_2:39827030-39827049 | None:intergenic | 35.0% | |
AAGGAAGAAAGAGAGAGAGT+GGG | - | chr4_2:39819623-39819642 | None:intergenic | 40.0% | |
!! | TTAGAGAGAGAGAGCATTGA+AGG | - | chr4_2:39819642-39819661 | None:intergenic | 40.0% |
! | TTTTGCTCCCTTTTCAGTTG+AGG | - | chr4_2:39820337-39820356 | None:intergenic | 40.0% |
TTCTTGCGTATAACCTGCAA+GGG | - | chr4_2:39820360-39820379 | None:intergenic | 40.0% | |
TTTCTTGCGTATAACCTGCA+AGG | - | chr4_2:39820361-39820380 | None:intergenic | 40.0% | |
!! | TAACTCTTTGACAGGTTGGT+AGG | + | chr4_2:39820457-39820476 | Msa0599690:five_prime_UTR | 40.0% |
! | ATGGTTTTCACTGCAGGATT+TGG | - | chr4_2:39821452-39821471 | None:intergenic | 40.0% |
!!! | TAACGTTTTCTTTTGGGACG+TGG | - | chr4_2:39821508-39821527 | None:intergenic | 40.0% |
!! | GCGGTGATAACGTTTTCTTT+TGG | - | chr4_2:39821515-39821534 | None:intergenic | 40.0% |
ACGATTCCATTTCTTGGATC+TGG | - | chr4_2:39821549-39821568 | None:intergenic | 40.0% | |
AAGGAGTTAAGCAGAGAGTT+AGG | + | chr4_2:39821750-39821769 | Msa0599690:CDS | 40.0% | |
AGGAGTTAAGCAGAGAGTTA+GGG | + | chr4_2:39821751-39821770 | Msa0599690:CDS | 40.0% | |
! | AGCCTTTGCAAGTCAAGTTT+TGG | + | chr4_2:39821778-39821797 | Msa0599690:CDS | 40.0% |
AGCTTAGAGCTGATAACATG+AGG | + | chr4_2:39821965-39821984 | Msa0599690:CDS | 40.0% | |
GAGCTGATAACATGAGGTAT+AGG | + | chr4_2:39821971-39821990 | Msa0599690:CDS | 40.0% | |
GACATTTCACCTATAGCTGT+TGG | - | chr4_2:39822036-39822055 | None:intergenic | 40.0% | |
AAATGCAAGGCTAAGAGAAG+AGG | + | chr4_2:39822083-39822102 | Msa0599690:CDS | 40.0% | |
! | CAATCAAGGGATTGGTACTA+TGG | + | chr4_2:39822754-39822773 | Msa0599690:intron | 40.0% |
TGACCTTAGAATATCTCCAC+TGG | - | chr4_2:39822792-39822811 | None:intergenic | 40.0% | |
CAGCTATGGAAGAGCTTATT+GGG | + | chr4_2:39822964-39822983 | Msa0599690:CDS | 40.0% | |
TATGGAAGAGCTTATTGGGA+TGG | + | chr4_2:39822968-39822987 | Msa0599690:CDS | 40.0% | |
GGTGTAGTACTTAACCAAAG+AGG | - | chr4_2:39823008-39823027 | None:intergenic | 40.0% | |
TGGTTAAGTACTACACCTGA+TGG | + | chr4_2:39823011-39823030 | Msa0599690:CDS | 40.0% | |
! | GCTTCGCATTTGAAACCATT+AGG | - | chr4_2:39823101-39823120 | None:intergenic | 40.0% |
TTTCAAATGCGAAGCTTCGA+GGG | + | chr4_2:39823106-39823125 | Msa0599690:CDS | 40.0% | |
CAACCTTGTTGAGATTCTCA+TGG | + | chr4_2:39823157-39823176 | Msa0599690:CDS | 40.0% | |
CATCCATGAGAATCTCAACA+AGG | - | chr4_2:39823163-39823182 | None:intergenic | 40.0% | |
TGTTGAGATTCTCATGGATG+TGG | + | chr4_2:39823163-39823182 | Msa0599690:CDS | 40.0% | |
!! | CGTTGACCATTGGTTCTAAA+TGG | - | chr4_2:39823402-39823421 | None:intergenic | 40.0% |
CTACAATGGTGCATTACAAG+TGG | + | chr4_2:39823487-39823506 | Msa0599690:CDS | 40.0% | |
ACAAAGTAACTCTCACGAGT+CGG | - | chr4_2:39823698-39823717 | None:intergenic | 40.0% | |
! | CTCGTGAGAGTTACTTTGTA+AGG | + | chr4_2:39823699-39823718 | Msa0599690:CDS | 40.0% |
TACATCTAGACGAAGGACTA+GGG | - | chr4_2:39823787-39823806 | None:intergenic | 40.0% | |
CTTCTTCTACATCTAGACGA+AGG | - | chr4_2:39823794-39823813 | None:intergenic | 40.0% | |
CTTCGTCTAGATGTAGAAGA+AGG | + | chr4_2:39823792-39823811 | Msa0599690:CDS | 40.0% | |
GATGCCAAATGGTTACTCAA+AGG | + | chr4_2:39823838-39823857 | Msa0599690:CDS | 40.0% | |
TTACATTTGACGCAGAAGCT+AGG | + | chr4_2:39823990-39824009 | Msa0599690:intron | 40.0% | |
!! | TTTGTTGCTTCTGAAACGCA+CGG | + | chr4_2:39824014-39824033 | Msa0599690:intron | 40.0% |
!! | TGGACCGTAGTTCTAAATTG+TGG | - | chr4_2:39824219-39824238 | None:intergenic | 40.0% |
GCCAACATATATAGGTGACA+TGG | + | chr4_2:39824418-39824437 | Msa0599690:intron | 40.0% | |
CCCATGTCACCTATATATGT+TGG | - | chr4_2:39824422-39824441 | None:intergenic | 40.0% | |
! | ATGGGTTGAACATGTAGAAG+TGG | + | chr4_2:39824437-39824456 | Msa0599690:CDS | 40.0% |
AACATGTAGAAGTGGATGAG+AGG | + | chr4_2:39824445-39824464 | Msa0599690:CDS | 40.0% | |
ACATGTAGAAGTGGATGAGA+GGG | + | chr4_2:39824446-39824465 | Msa0599690:CDS | 40.0% | |
TACAAGCAGATTGTTAGCAC+TGG | + | chr4_2:39824483-39824502 | Msa0599690:CDS | 40.0% | |
!! | ATGCATTTGGTGCAAAACGT+TGG | + | chr4_2:39824508-39824527 | Msa0599690:CDS | 40.0% |
!! | TGCATTTGGTGCAAAACGTT+GGG | + | chr4_2:39824509-39824528 | Msa0599690:CDS | 40.0% |
TGATAACAAACCAAGAAGGG+AGG | + | chr4_2:39824775-39824794 | Msa0599690:CDS | 40.0% | |
! | GAGGAAGAGTATGTTGAAAC+TGG | + | chr4_2:39824794-39824813 | Msa0599690:CDS | 40.0% |
! | AAAACTTGTGTTGGTGGAAC+AGG | - | chr4_2:39824993-39825012 | None:intergenic | 40.0% |
TAATGAGAACTCCAGAACTG+AGG | + | chr4_2:39825025-39825044 | Msa0599690:CDS | 40.0% | |
! | ATGTTGCTCTGGCTTGAATT+TGG | - | chr4_2:39825484-39825503 | None:intergenic | 40.0% |
!! | GGAAGAAGTGCTACATAATC+TGG | - | chr4_2:39825607-39825626 | None:intergenic | 40.0% |
TATGTAGCACTTCTTCCATC+AGG | + | chr4_2:39825610-39825629 | Msa0599690:CDS | 40.0% | |
ACTCCATTTCCATTTCCATC+AGG | - | chr4_2:39825649-39825668 | None:intergenic | 40.0% | |
GATGGAAATGGAAATGGAGT+CGG | + | chr4_2:39825649-39825668 | Msa0599690:CDS | 40.0% | |
TGATCCAAGAGAGAGTTTAG+CGG | - | chr4_2:39825761-39825780 | None:intergenic | 40.0% | |
TATAGTCGAGTTATAGGGCA+AGG | + | chr4_2:39826259-39826278 | Msa0599690:intron | 40.0% | |
TGCAGTTTACAAGGATGAAG+AGG | + | chr4_2:39826596-39826615 | Msa0599690:intron | 40.0% | |
TGAAGAGGTTGCATTGCTAA+TGG | + | chr4_2:39826611-39826630 | Msa0599690:three_prime_UTR | 40.0% | |
GAAGAGGTTGCATTGCTAAT+GGG | + | chr4_2:39826612-39826631 | Msa0599690:three_prime_UTR | 40.0% | |
AAGAGGTTGCATTGCTAATG+GGG | + | chr4_2:39826613-39826632 | Msa0599690:three_prime_UTR | 40.0% | |
AGGTGGTGAGGAACTTAATT+AGG | + | chr4_2:39826647-39826666 | Msa0599690:three_prime_UTR | 40.0% | |
GGTAGTAAGGTCATAGAGTT+AGG | - | chr4_2:39826784-39826803 | None:intergenic | 40.0% | |
!! | ACCAGTCTTTTGTTTAGCCT+AGG | + | chr4_2:39826881-39826900 | Msa0599690:three_prime_UTR | 40.0% |
AGGAAGAAAGAGAGAGAGTG+GGG | - | chr4_2:39819622-39819641 | None:intergenic | 45.0% | |
GAAGGAAGAAAGAGAGAGAG+TGG | - | chr4_2:39819624-39819643 | None:intergenic | 45.0% | |
!!! | GAGAGATCCTGGTTTTGAGA+AGG | - | chr4_2:39819717-39819736 | None:intergenic | 45.0% |
GTGAGAAAGAGTAGCAACGT+TGG | + | chr4_2:39820405-39820424 | Msa0599690:five_prime_UTR | 45.0% | |
!! | TTGTGAGTGGTGTTGCAGTT+TGG | - | chr4_2:39820961-39820980 | None:intergenic | 45.0% |
! | TTTCGAAGCACTCGTCTTCT+CGG | - | chr4_2:39821423-39821442 | None:intergenic | 45.0% |
TCCTGCAGTGAAAACCATGA+AGG | + | chr4_2:39821454-39821473 | Msa0599690:CDS | 45.0% | |
! | ACCTTCATGGTTTTCACTGC+AGG | - | chr4_2:39821458-39821477 | None:intergenic | 45.0% |
TGCAGTGAAAACCATGAAGG+TGG | + | chr4_2:39821457-39821476 | Msa0599690:CDS | 45.0% | |
TCAGCACCAGATCCAAGAAA+TGG | + | chr4_2:39821540-39821559 | Msa0599690:CDS | 45.0% | |
CCTTCCTTTGCTTGTCATCT+GGG | - | chr4_2:39821734-39821753 | None:intergenic | 45.0% | |
TCCTTCCTTTGCTTGTCATC+TGG | - | chr4_2:39821735-39821754 | None:intergenic | 45.0% | |
GCAGACACAACATGAACGTT+CGG | + | chr4_2:39821912-39821931 | Msa0599690:intron | 45.0% | |
GCTTCATGTCCTAATTGTGG+TGG | + | chr4_2:39822009-39822028 | Msa0599690:CDS | 45.0% | |
GTTATGGCTGTTGCACCATA+GGG | - | chr4_2:39822422-39822441 | None:intergenic | 45.0% | |
TGTTATGGCTGTTGCACCAT+AGG | - | chr4_2:39822423-39822442 | None:intergenic | 45.0% | |
ACTCGTACTTGGATCCCTTA+CGG | - | chr4_2:39822520-39822539 | None:intergenic | 45.0% | |
TCATTTGTGGCACTCGTACT+TGG | - | chr4_2:39822531-39822550 | None:intergenic | 45.0% | |
! | CCAAAACCAATTTCTGGACG+CGG | - | chr4_2:39822734-39822753 | None:intergenic | 45.0% |
!! | GGTTTTGGCAATCAAGGGAT+TGG | + | chr4_2:39822746-39822765 | Msa0599690:CDS | 45.0% |
GAGCCAGTGGAGATATTCTA+AGG | + | chr4_2:39822786-39822805 | Msa0599690:intron | 45.0% | |
!! | ATTGGTTTGTCTGCTTCGGT+CGG | - | chr4_2:39822824-39822843 | None:intergenic | 45.0% |
GCAGCTATGGAAGAGCTTAT+TGG | + | chr4_2:39822963-39822982 | Msa0599690:CDS | 45.0% | |
CTTATTGGGATGGCACAGAT+GGG | + | chr4_2:39822978-39822997 | Msa0599690:CDS | 45.0% | |
TATGTTAGGTCGTTTCCTCG+TGG | + | chr4_2:39823062-39823081 | Msa0599690:CDS | 45.0% | |
ATGTTAGGTCGTTTCCTCGT+GGG | + | chr4_2:39823063-39823082 | Msa0599690:CDS | 45.0% | |
GGGATTGGACCTAAACCTAA+TGG | + | chr4_2:39823083-39823102 | Msa0599690:CDS | 45.0% | |
GTTTCAAATGCGAAGCTTCG+AGG | + | chr4_2:39823105-39823124 | Msa0599690:CDS | 45.0% | |
TGTTTCAAGAGCTGTGACTG+TGG | + | chr4_2:39823436-39823455 | Msa0599690:CDS | 45.0% | |
!! | ACTGTGGAAGTGTTGTCAAC+TGG | + | chr4_2:39823452-39823471 | Msa0599690:CDS | 45.0% |
CTACATCTAGACGAAGGACT+AGG | - | chr4_2:39823788-39823807 | None:intergenic | 45.0% | |
AGATGTAGAAGAAGGCCTTC+TGG | + | chr4_2:39823800-39823819 | Msa0599690:CDS | 45.0% | |
CATGTAGAAGTGGATGAGAG+GGG | + | chr4_2:39824447-39824466 | Msa0599690:CDS | 45.0% | |
! | GTTAGCACTGGACATGCATT+TGG | + | chr4_2:39824495-39824514 | Msa0599690:CDS | 45.0% |
ACATACTCTTCCTCCCTTCT+TGG | - | chr4_2:39824788-39824807 | None:intergenic | 45.0% | |
GTTGAAACTGGCAGAGAGAA+TGG | + | chr4_2:39824806-39824825 | Msa0599690:CDS | 45.0% | |
CGTCATCACTCTCACATCAT+CGG | - | chr4_2:39824901-39824920 | None:intergenic | 45.0% | |
!! | CGTAAGAGTGTTGATGATCC+TGG | + | chr4_2:39824921-39824940 | Msa0599690:CDS | 45.0% |
GCACTAAGAACAATACCAGG+AGG | - | chr4_2:39824951-39824970 | None:intergenic | 45.0% | |
GCAGCACTAAGAACAATACC+AGG | - | chr4_2:39824954-39824973 | None:intergenic | 45.0% | |
TGGTGGAGTTGTGCAAGAAA+TGG | + | chr4_2:39825144-39825163 | Msa0599690:CDS | 45.0% | |
GAAATGGCGCACATTGCAAA+TGG | + | chr4_2:39825160-39825179 | Msa0599690:CDS | 45.0% | |
ATTGCAAATGGACGCGATAC+TGG | + | chr4_2:39825172-39825191 | Msa0599690:CDS | 45.0% | |
! | GAGAGTGTAACAGATGCAAC+AGG | + | chr4_2:39825517-39825536 | Msa0599690:CDS | 45.0% |
CATTTCCATTTCCATCAGGC+AGG | - | chr4_2:39825645-39825664 | None:intergenic | 45.0% | |
CTGCCTGATGGAAATGGAAA+TGG | + | chr4_2:39825643-39825662 | Msa0599690:CDS | 45.0% | |
!!! | GACCGTCGCTTTTCAGATAT+TGG | + | chr4_2:39825720-39825739 | Msa0599690:CDS | 45.0% |
AGAATCAAAGCTTCGCTGTC+TGG | + | chr4_2:39825820-39825839 | Msa0599690:CDS | 45.0% | |
GCACTAAATGCGGACAAATG+TGG | + | chr4_2:39826087-39826106 | Msa0599690:intron | 45.0% | |
TGTGGCTGCAATCGTGAATT+CGG | + | chr4_2:39826105-39826124 | Msa0599690:intron | 45.0% | |
GCCTAGGCTAAACAAAAGAC+TGG | - | chr4_2:39826885-39826904 | None:intergenic | 45.0% | |
!!! | TTTTTTTTTATATTTTTATG+GGG | + | chr4_2:39819926-39819945 | Msa0599690:intron | 5.0% |
!!! | AACTTTTTATAATTATTATT+TGG | - | chr4_2:39821116-39821135 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTTTTTTGA+GGG | + | chr4_2:39826850-39826869 | Msa0599690:three_prime_UTR | 5.0% |
AGAGAGTGGGGAACAGATAG+AGG | - | chr4_2:39819610-39819629 | None:intergenic | 50.0% | |
AAAGGGAGCAAAACCCTTGC+AGG | + | chr4_2:39820344-39820363 | Msa0599690:five_prime_UTR | 50.0% | |
CAGTCAAACCTCTTGGAAGC+TGG | + | chr4_2:39821340-39821359 | Msa0599690:CDS | 50.0% | |
ACTCGTCTTCTCGGATTCGA+GGG | - | chr4_2:39821414-39821433 | None:intergenic | 50.0% | |
GAAGACGAGTGCTTCGAAAG+TGG | + | chr4_2:39821424-39821443 | Msa0599690:CDS | 50.0% | |
GCTGCTTCTGGTGAAGAACA+AGG | + | chr4_2:39821481-39821500 | Msa0599690:CDS | 50.0% | |
CTTTGCTTGTCATCTGGGTG+TGG | - | chr4_2:39821729-39821748 | None:intergenic | 50.0% | |
CACACCCAGATGACAAGCAA+AGG | + | chr4_2:39821727-39821746 | Msa0599690:CDS | 50.0% | |
CCCAGATGACAAGCAAAGGA+AGG | + | chr4_2:39821731-39821750 | Msa0599690:CDS | 50.0% | |
GCTGTTGGACCACCACAATT+AGG | - | chr4_2:39822021-39822040 | None:intergenic | 50.0% | |
TGTGGTGGTCCAACAGCTAT+AGG | + | chr4_2:39822024-39822043 | Msa0599690:CDS | 50.0% | |
CAGATACTCTACGGTCCCTA+TGG | + | chr4_2:39822404-39822423 | Msa0599690:intron | 50.0% | |
AGCACCATACAATCGCCGTA+AGG | + | chr4_2:39822502-39822521 | Msa0599690:intron | 50.0% | |
GCACCATACAATCGCCGTAA+GGG | + | chr4_2:39822503-39822522 | Msa0599690:intron | 50.0% | |
GATCCCTTACGGCGATTGTA+TGG | - | chr4_2:39822509-39822528 | None:intergenic | 50.0% | |
GAAGTACGTAGGAAAGCCAG+TGG | + | chr4_2:39822676-39822695 | Msa0599690:CDS | 50.0% | |
! | AACCAATTTCTGGACGCGGT+GGG | - | chr4_2:39822730-39822749 | None:intergenic | 50.0% |
! | AAACCAATTTCTGGACGCGG+TGG | - | chr4_2:39822731-39822750 | None:intergenic | 50.0% |
!! | CCGCGTCCAGAAATTGGTTT+TGG | + | chr4_2:39822731-39822750 | Msa0599690:CDS | 50.0% |
ATGGACATGTATGGAGCCAG+TGG | + | chr4_2:39822773-39822792 | Msa0599690:intron | 50.0% | |
GCTTATTGGGATGGCACAGA+TGG | + | chr4_2:39822977-39822996 | Msa0599690:CDS | 50.0% | |
CACAGATGGGTGATCCTCTT+TGG | + | chr4_2:39822991-39823010 | Msa0599690:CDS | 50.0% | |
AGAACAGTAGCAGCTCCATC+AGG | - | chr4_2:39823029-39823048 | None:intergenic | 50.0% | |
CAGCAAACACCGTTGACCAT+TGG | - | chr4_2:39823412-39823431 | None:intergenic | 50.0% | |
CAATGGTCAACGGTGTTTGC+TGG | + | chr4_2:39823410-39823429 | Msa0599690:CDS | 50.0% | |
!! | GGAAGTGTTGTCAACTGGAG+TGG | + | chr4_2:39823457-39823476 | Msa0599690:CDS | 50.0% |
TGTTGTCAACTGGAGTGGCA+GGG | + | chr4_2:39823462-39823481 | Msa0599690:CDS | 50.0% | |
GGCAGTTGTGGATGTGTCTT+TGG | + | chr4_2:39823751-39823770 | Msa0599690:CDS | 50.0% | |
CATGACGCAGAACCAAACGA+AGG | - | chr4_2:39823947-39823966 | None:intergenic | 50.0% | |
!! | TGAAAGGCTTGCTAGCTCCA+TGG | + | chr4_2:39824554-39824573 | Msa0599690:CDS | 50.0% |
! | GGTCGGAATGTTTGTTGCCA+TGG | - | chr4_2:39824574-39824593 | None:intergenic | 50.0% |
GTGCTTCAACAGCACACACA+TGG | + | chr4_2:39824853-39824872 | Msa0599690:CDS | 50.0% | |
CACACATGGACAACACTGTC+TGG | + | chr4_2:39824867-39824886 | Msa0599690:CDS | 50.0% | |
! | TGGACAACACTGTCTGGAAC+AGG | + | chr4_2:39824873-39824892 | Msa0599690:CDS | 50.0% |
ACAATACCAGGAGGTCTTCC+AGG | - | chr4_2:39824942-39824961 | None:intergenic | 50.0% | |
GGCAGGATAGCAAATCCTGA+TGG | - | chr4_2:39825628-39825647 | None:intergenic | 50.0% | |
!! | GGATTTGCTATCCTGCCTGA+TGG | + | chr4_2:39825631-39825650 | Msa0599690:CDS | 50.0% |
GCTATCCTGCCTGATGGAAA+TGG | + | chr4_2:39825637-39825656 | Msa0599690:CDS | 50.0% | |
GGAAATGGAAATGGAGTCGG+CGG | + | chr4_2:39825652-39825671 | Msa0599690:CDS | 50.0% | |
CTGAAAAGCGACGGTCAGAA+GGG | - | chr4_2:39825716-39825735 | None:intergenic | 50.0% | |
TCTGAAAAGCGACGGTCAGA+AGG | - | chr4_2:39825717-39825736 | None:intergenic | 50.0% | |
CCAAGAGAGAGTTTAGCGGT+TGG | - | chr4_2:39825757-39825776 | None:intergenic | 50.0% | |
CCAACCGCTAAACTCTCTCT+TGG | + | chr4_2:39825754-39825773 | Msa0599690:CDS | 50.0% | |
! | TTCGGGAATTGACTTCCCCT+AGG | + | chr4_2:39826743-39826762 | Msa0599690:three_prime_UTR | 50.0% |
GGAACTGACCAGCTTCCAAG+AGG | - | chr4_2:39821351-39821370 | None:intergenic | 55.0% | |
CACTCGTCTTCTCGGATTCG+AGG | - | chr4_2:39821415-39821434 | None:intergenic | 55.0% | |
CAGAAGCAGCACCACCTTCA+TGG | - | chr4_2:39821471-39821490 | None:intergenic | 55.0% | |
!! | CATGAAGGTGGTGCTGCTTC+TGG | + | chr4_2:39821469-39821488 | Msa0599690:CDS | 55.0% |
! | CTTGGATCTGGTGCTGAGTG+TGG | - | chr4_2:39821537-39821556 | None:intergenic | 55.0% |
ACGATGGCAGCGAAGTACGT+AGG | + | chr4_2:39822665-39822684 | Msa0599690:CDS | 55.0% | |
AGGTCGTTTCCTCGTGGGAT+TGG | + | chr4_2:39823068-39823087 | Msa0599690:CDS | 55.0% | |
GGTTTAGGTCCAATCCCACG+AGG | - | chr4_2:39823080-39823099 | None:intergenic | 55.0% | |
GTGTTGTCAACTGGAGTGGC+AGG | + | chr4_2:39823461-39823480 | Msa0599690:CDS | 55.0% | |
GGAGTGGCAGGGAACTACAA+TGG | + | chr4_2:39823473-39823492 | Msa0599690:CDS | 55.0% | |
AACAACATCCTGACGGGACC+TGG | + | chr4_2:39823729-39823748 | Msa0599690:CDS | 55.0% | |
ACAACATCCTGACGGGACCT+GGG | + | chr4_2:39823730-39823749 | Msa0599690:CDS | 55.0% | |
AGACACATCCACAACTGCCC+AGG | - | chr4_2:39823750-39823769 | None:intergenic | 55.0% | |
GATGATCCTGGAAGACCTCC+TGG | + | chr4_2:39824933-39824952 | Msa0599690:CDS | 55.0% | |
AATGGAGTCGGCGGTGAAAC+TGG | + | chr4_2:39825661-39825680 | Msa0599690:CDS | 55.0% | |
! | GGATCTGGTGCTGAGTGTGG+CGG | - | chr4_2:39821534-39821553 | None:intergenic | 60.0% |
CTCCCACCGCGTCCAGAAAT+TGG | + | chr4_2:39822725-39822744 | Msa0599690:CDS | 60.0% | |
CGAGTCGGCACAAGAGGTGA+GGG | - | chr4_2:39823683-39823702 | None:intergenic | 60.0% | |
ACGAGTCGGCACAAGAGGTG+AGG | - | chr4_2:39823684-39823703 | None:intergenic | 60.0% | |
CTCTCACGAGTCGGCACAAG+AGG | - | chr4_2:39823689-39823708 | None:intergenic | 60.0% | |
TCTGGACGCGGTGGGAGAGA+TGG | - | chr4_2:39822722-39822741 | None:intergenic | 65.0% | |
ACAACTGCCCAGGTCCCGTC+AGG | - | chr4_2:39823740-39823759 | None:intergenic | 65.0% | |
TGACGGGACCTGGGCAGTTG+TGG | + | chr4_2:39823739-39823758 | Msa0599690:CDS | 65.0% | |
GGAGTCGGCGGTGAAACTGG+CGG | + | chr4_2:39825664-39825683 | Msa0599690:CDS | 65.0% | |
GCGGTGAAACTGGCGGAGGA+GGG | + | chr4_2:39825671-39825690 | Msa0599690:CDS | 65.0% | |
CGGTGAAACTGGCGGAGGAG+GGG | + | chr4_2:39825672-39825691 | Msa0599690:CDS | 65.0% | |
GGTGAAACTGGCGGAGGAGG+GGG | + | chr4_2:39825673-39825692 | Msa0599690:CDS | 65.0% | |
GTCGGCGGTGAAACTGGCGG+AGG | + | chr4_2:39825667-39825686 | Msa0599690:CDS | 70.0% | |
GGCGGTGAAACTGGCGGAGG+AGG | + | chr4_2:39825670-39825689 | Msa0599690:CDS | 70.0% | |
ACTGGCGGAGGAGGGGGAGC+TGG | + | chr4_2:39825679-39825698 | Msa0599690:CDS | 75.0% | |
GGAGGAGGGGGAGCTGGTGC+TGG | + | chr4_2:39825685-39825704 | Msa0599690:CDS | 75.0% | |
! | GGAGGGGGAGCTGGTGCTGG+TGG | + | chr4_2:39825688-39825707 | Msa0599690:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 39819600 | 39827079 | 39819600 | ID=Msa0599690;Name=Msa0599690 |
chr4_2 | mRNA | 39819600 | 39827079 | 39819600 | ID=Msa0599690-mRNA-1;Parent=Msa0599690;Name=Msa0599690-mRNA-1;_AED=0.09;_eAED=0.09;_QI=465|0.92|0.86|1|0.71|0.6|15|489|702 |
chr4_2 | exon | 39819600 | 39819808 | 39819600 | ID=Msa0599690-mRNA-1:exon:8668;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39820288 | 39820478 | 39820288 | ID=Msa0599690-mRNA-1:exon:8669;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39821269 | 39821566 | 39821269 | ID=Msa0599690-mRNA-1:exon:8670;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39821710 | 39821827 | 39821710 | ID=Msa0599690-mRNA-1:exon:8671;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39821916 | 39822104 | 39821916 | ID=Msa0599690-mRNA-1:exon:8672;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39822650 | 39822767 | 39822650 | ID=Msa0599690-mRNA-1:exon:8673;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39822958 | 39823184 | 39822958 | ID=Msa0599690-mRNA-1:exon:8674;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39823407 | 39823508 | 39823407 | ID=Msa0599690-mRNA-1:exon:8675;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39823659 | 39823859 | 39823659 | ID=Msa0599690-mRNA-1:exon:8676;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39824432 | 39824606 | 39824432 | ID=Msa0599690-mRNA-1:exon:8677;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39824775 | 39825046 | 39824775 | ID=Msa0599690-mRNA-1:exon:8678;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39825127 | 39825222 | 39825127 | ID=Msa0599690-mRNA-1:exon:8679;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39825478 | 39825886 | 39825478 | ID=Msa0599690-mRNA-1:exon:8680;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39826601 | 39826981 | 39826601 | ID=Msa0599690-mRNA-1:exon:8681;Parent=Msa0599690-mRNA-1 |
chr4_2 | exon | 39827003 | 39827079 | 39827003 | ID=Msa0599690-mRNA-1:exon:8682;Parent=Msa0599690-mRNA-1 |
chr4_2 | five_prime_UTR | 39819600 | 39819808 | 39819600 | ID=Msa0599690-mRNA-1:five_prime_utr;Parent=Msa0599690-mRNA-1 |
chr4_2 | five_prime_UTR | 39820288 | 39820478 | 39820288 | ID=Msa0599690-mRNA-1:five_prime_utr;Parent=Msa0599690-mRNA-1 |
chr4_2 | five_prime_UTR | 39821269 | 39821333 | 39821269 | ID=Msa0599690-mRNA-1:five_prime_utr;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39821334 | 39821566 | 39821334 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39821710 | 39821827 | 39821710 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39821916 | 39822104 | 39821916 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39822650 | 39822767 | 39822650 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39822958 | 39823184 | 39822958 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39823407 | 39823508 | 39823407 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39823659 | 39823859 | 39823659 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39824432 | 39824606 | 39824432 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39824775 | 39825046 | 39824775 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39825127 | 39825222 | 39825127 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | CDS | 39825478 | 39825855 | 39825478 | ID=Msa0599690-mRNA-1:cds;Parent=Msa0599690-mRNA-1 |
chr4_2 | three_prime_UTR | 39825856 | 39825886 | 39825856 | ID=Msa0599690-mRNA-1:three_prime_utr;Parent=Msa0599690-mRNA-1 |
chr4_2 | three_prime_UTR | 39826601 | 39826981 | 39826601 | ID=Msa0599690-mRNA-1:three_prime_utr;Parent=Msa0599690-mRNA-1 |
chr4_2 | three_prime_UTR | 39827003 | 39827079 | 39827003 | ID=Msa0599690-mRNA-1:three_prime_utr;Parent=Msa0599690-mRNA-1 |
Gene Sequence |
Protein sequence |