Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052140 | XP_003621684.1 | 87.115 | 357 | 28 | 2 | 1 | 357 | 1 | 339 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052140 | sp|Q7XT99|AKR2_ORYSJ | 71.788 | 358 | 78 | 5 | 4 | 356 | 11 | 350 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052140 | A2Q5A8 | 87.115 | 357 | 28 | 2 | 1 | 357 | 1 | 339 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0731180 | Msa1052140 | 0.801975 | 6.985868e-49 | -8.615850e-47 |
| Msa0137570 | Msa1052140 | 0.817643 | 2.964954e-52 | -8.615850e-47 |
| Msa0225470 | Msa1052140 | 0.807093 | 5.981857e-50 | -8.615850e-47 |
| Msa0370430 | Msa1052140 | 0.810179 | 1.310726e-50 | -8.615850e-47 |
| Msa0389810 | Msa1052140 | 0.818568 | 1.831667e-52 | -8.615850e-47 |
| Msa0464420 | Msa1052140 | 0.812964 | 3.252477e-51 | -8.615850e-47 |
| Msa0468130 | Msa1052140 | 0.815786 | 7.732705e-52 | -8.615850e-47 |
| Msa0982270 | Msa1052140 | 0.818691 | 1.717571e-52 | -8.615850e-47 |
| Msa1006850 | Msa1052140 | 0.805361 | 1.385693e-49 | -8.615850e-47 |
| Msa1052140 | Msa1087990 | 0.801867 | 7.351005e-49 | -8.615850e-47 |
| Msa1052140 | Msa1231180 | 0.801519 | 8.666912e-49 | -8.615850e-47 |
| Msa1052140 | Msa1233500 | 0.804864 | 1.760537e-49 | -8.615850e-47 |
| Msa1052140 | Msa1246660 | 0.809679 | 1.679938e-50 | -8.615850e-47 |
| Msa1052140 | Msa1287680 | 0.825905 | 3.632095e-54 | -8.615850e-47 |
| Msa1052140 | Msa1307740 | 0.822623 | 2.145744e-53 | -8.615850e-47 |
| Msa0510040 | Msa1052140 | 0.832868 | 7.392156e-56 | -8.615850e-47 |
| Msa0876360 | Msa1052140 | 0.805216 | 1.485707e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052140 | MtrunA17_Chr7g0221791 | 87.115 | 357 | 28 | 2 | 1 | 357 | 1 | 339 | 0.0 | 629 |
| Msa1052140 | MtrunA17_Chr7g0222121 | 79.540 | 391 | 28 | 3 | 1 | 357 | 1 | 373 | 0.0 | 609 |
| Msa1052140 | MtrunA17_Chr7g0222171 | 81.006 | 358 | 48 | 4 | 1 | 357 | 1 | 339 | 0.0 | 588 |
| Msa1052140 | MtrunA17_Chr7g0274071 | 53.429 | 350 | 136 | 8 | 7 | 350 | 16 | 344 | 5.36e-128 | 371 |
| Msa1052140 | MtrunA17_Chr7g0274061 | 54.648 | 355 | 132 | 9 | 6 | 350 | 13 | 348 | 1.05e-127 | 370 |
| Msa1052140 | MtrunA17_Chr7g0274041 | 52.514 | 358 | 140 | 8 | 4 | 352 | 7 | 343 | 3.30e-124 | 361 |
| Msa1052140 | MtrunA17_Chr1g0204651 | 52.958 | 355 | 141 | 8 | 3 | 350 | 4 | 339 | 2.91e-122 | 356 |
| Msa1052140 | MtrunA17_Chr7g0274081 | 56.122 | 196 | 79 | 3 | 161 | 350 | 2 | 196 | 6.07e-77 | 235 |
| Msa1052140 | MtrunA17_Chr7g0221781 | 78.378 | 148 | 14 | 2 | 1 | 148 | 1 | 130 | 2.08e-75 | 229 |
| Msa1052140 | MtrunA17_Chr7g0221771 | 90.090 | 111 | 11 | 0 | 247 | 357 | 3 | 113 | 3.89e-67 | 207 |
| Msa1052140 | MtrunA17_Chr7g0222141 | 97.561 | 82 | 2 | 0 | 166 | 247 | 65 | 146 | 1.76e-51 | 169 |
| Msa1052140 | MtrunA17_Chr7g0221801 | 88.095 | 84 | 9 | 1 | 1 | 84 | 1 | 83 | 1.16e-48 | 159 |
| Msa1052140 | MtrunA17_Chr7g0222151 | 93.243 | 74 | 5 | 0 | 247 | 320 | 3 | 76 | 7.95e-46 | 151 |
| Msa1052140 | MtrunA17_Chr3g0095421 | 30.383 | 339 | 205 | 11 | 6 | 332 | 37 | 356 | 4.96e-26 | 107 |
| Msa1052140 | MtrunA17_Chr3g0127491 | 27.778 | 306 | 178 | 11 | 39 | 328 | 71 | 349 | 7.45e-24 | 100 |
| Msa1052140 | MtrunA17_Chr1g0167421 | 26.184 | 359 | 210 | 12 | 8 | 327 | 65 | 407 | 3.33e-18 | 85.5 |
| Msa1052140 | MtrunA17_Chr1g0169691 | 26.537 | 309 | 183 | 12 | 42 | 330 | 35 | 319 | 1.73e-17 | 82.4 |
| Msa1052140 | MtrunA17_Chr7g0274091 | 39.048 | 105 | 44 | 4 | 4 | 106 | 9 | 95 | 2.82e-13 | 65.9 |
| Msa1052140 | MtrunA17_Chr4g0049341 | 27.273 | 231 | 141 | 7 | 8 | 231 | 5 | 215 | 3.48e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1052140 | AT1G60730.1 | 72.829 | 357 | 76 | 4 | 4 | 357 | 7 | 345 | 0.0 | 521 |
| Msa1052140 | AT1G60710.1 | 72.269 | 357 | 78 | 4 | 4 | 357 | 7 | 345 | 0.0 | 518 |
| Msa1052140 | AT1G60680.1 | 71.788 | 358 | 79 | 5 | 3 | 356 | 6 | 345 | 0.0 | 512 |
| Msa1052140 | AT1G60690.1 | 70.028 | 357 | 86 | 4 | 3 | 356 | 6 | 344 | 0.0 | 510 |
| Msa1052140 | AT1G60730.3 | 68.966 | 377 | 76 | 5 | 4 | 357 | 7 | 365 | 0.0 | 509 |
| Msa1052140 | AT1G10810.1 | 66.292 | 356 | 99 | 4 | 4 | 356 | 7 | 344 | 2.19e-169 | 476 |
| Msa1052140 | AT1G60750.1 | 67.598 | 358 | 77 | 6 | 3 | 356 | 7 | 329 | 1.94e-167 | 470 |
| Msa1052140 | AT1G10810.3 | 69.630 | 270 | 79 | 2 | 90 | 356 | 23 | 292 | 1.94e-136 | 390 |
| Msa1052140 | AT1G60680.2 | 72.874 | 247 | 47 | 4 | 3 | 247 | 6 | 234 | 1.77e-122 | 353 |
| Msa1052140 | AT1G10810.2 | 67.200 | 250 | 63 | 3 | 4 | 252 | 7 | 238 | 8.22e-115 | 334 |
| Msa1052140 | AT1G60730.2 | 65.605 | 157 | 35 | 3 | 4 | 159 | 7 | 145 | 1.00e-62 | 199 |
| Msa1052140 | AT5G53580.1 | 29.530 | 298 | 167 | 10 | 47 | 328 | 80 | 350 | 6.00e-25 | 104 |
| Msa1052140 | AT1G06690.1 | 28.904 | 301 | 172 | 10 | 47 | 332 | 94 | 367 | 3.51e-21 | 94.0 |
| Msa1052140 | AT4G33670.1 | 24.709 | 344 | 213 | 10 | 1 | 333 | 1 | 309 | 1.17e-18 | 85.9 |
| Msa1052140 | AT1G04690.1 | 27.213 | 305 | 162 | 11 | 51 | 327 | 44 | 316 | 2.89e-18 | 85.1 |
| Msa1052140 | AT1G04420.1 | 25.203 | 369 | 221 | 15 | 8 | 337 | 60 | 412 | 2.22e-17 | 83.2 |
Find 82 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAATTTGGCTACAAAATT+TGG | 0.121716 | 7_2:-20326251 | Msa1052140:CDS |
| TTGATTCAAGTTCTCAATTT+TGG | 0.160230 | 7_2:+20324471 | None:intergenic |
| TCCAACTGCACAGCTGTTAT+TGG | 0.217840 | 7_2:+20325787 | None:intergenic |
| CACACCAATGAAGTTCTTCT+TGG | 0.223012 | 7_2:-20326445 | Msa1052140:CDS |
| TCATAATGATTTATTTCTTA+TGG | 0.227099 | 7_2:+20324296 | None:intergenic |
| AGTGAGAGAGAAAGTTAATT+TGG | 0.231011 | 7_2:-20326264 | Msa1052140:CDS |
| CTTGACACTTCTGACTTCTA+TGG | 0.250488 | 7_2:-20326472 | Msa1052140:CDS |
| TCAAGTTCTCCCATTTCTTC+TGG | 0.258309 | 7_2:+20324418 | None:intergenic |
| AAATCAAAAGAAAAGCTAAA+AGG | 0.273945 | 7_2:+20326400 | None:intergenic |
| ATACTCCACCACTCTCTTCT+TGG | 0.280266 | 7_2:-20324330 | Msa1052140:CDS |
| CTTTCTAGGGAACTTGGAAT+TGG | 0.337393 | 7_2:-20325455 | Msa1052140:intron |
| ATGAGCATGTCTGCTTTCTA+TGG | 0.353634 | 7_2:-20326562 | Msa1052140:CDS |
| GAAACTAACACCAGAAGAAA+TGG | 0.357383 | 7_2:-20324428 | Msa1052140:CDS |
| TGTGCTCTTCTGATTGTTGC+AGG | 0.371067 | 7_2:+20325820 | None:intergenic |
| CTTTCCAAGAAGAACTTCAT+TGG | 0.376886 | 7_2:+20326441 | None:intergenic |
| AAGACGTAATTCCAACTTGC+AGG | 0.402309 | 7_2:-20325735 | Msa1052140:intron |
| TGCAGTACATCCCTTCTTTG+TGG | 0.420403 | 7_2:+20324558 | None:intergenic |
| AATTGTGGAATAGGCTTTGA+AGG | 0.428009 | 7_2:-20326288 | Msa1052140:intron |
| GAAGTATCCTTGCAAGGACT+TGG | 0.431552 | 7_2:-20326589 | Msa1052140:CDS |
| AGAGCAATCATGTCAGGTTC+AGG | 0.437605 | 7_2:+20326529 | None:intergenic |
| GATTGTTGCAGGCGAGGCCT+CGG | 0.439243 | 7_2:+20325831 | None:intergenic |
| AAAAGTGACACCAGATTGTA+TGG | 0.442868 | 7_2:+20326495 | None:intergenic |
| ATATAGTCTGATTCTGCTGC+AGG | 0.450000 | 7_2:+20324602 | None:intergenic |
| TATGAGATCTGTGGTGATCC+AGG | 0.452334 | 7_2:-20326206 | Msa1052140:CDS |
| GTTGCTTGACAACTTGCAAC+AGG | 0.458094 | 7_2:-20325381 | Msa1052140:CDS |
| AATCAAAAGAAAAGCTAAAA+GGG | 0.464220 | 7_2:+20326401 | None:intergenic |
| ATAGTTGCATATAGTCCTCT+TGG | 0.466082 | 7_2:-20325431 | Msa1052140:CDS |
| AAAGTGGGAAGAATGAAGTT+AGG | 0.469687 | 7_2:-20326628 | Msa1052140:CDS |
| CAATGAACTGGCCACAAAGA+AGG | 0.472154 | 7_2:-20324569 | Msa1052140:CDS |
| ATCCATCATGCCATACAATC+TGG | 0.476965 | 7_2:-20326505 | Msa1052140:CDS |
| CATCTCAGCTTGCATTGGCA+TGG | 0.479749 | 7_2:-20324537 | Msa1052140:CDS |
| TCGGGCACACGTCGTTTCCT+TGG | 0.481328 | 7_2:+20324506 | None:intergenic |
| ATTTGACAAAGTCAATGAAC+TGG | 0.487530 | 7_2:-20324581 | Msa1052140:CDS |
| TCCAATAACAGCTGTGCAGT+TGG | 0.490955 | 7_2:-20325788 | Msa1052140:CDS |
| AATCAAACCGTGATTTCAAT+CGG | 0.494716 | 7_2:+20326092 | None:intergenic |
| CAAGCTTCTCTCACATAGCC+TGG | 0.497055 | 7_2:+20326188 | None:intergenic |
| CAATGAAGTTCTTCTTGGAA+AGG | 0.501797 | 7_2:-20326440 | Msa1052140:CDS |
| TAAATATCACACCTGCAAGT+TGG | 0.505103 | 7_2:+20325724 | None:intergenic |
| ATCATGTCAGGTTCAGGCTT+AGG | 0.505151 | 7_2:+20326535 | None:intergenic |
| AAACTAACACCAGAAGAAAT+GGG | 0.505399 | 7_2:-20324427 | Msa1052140:CDS |
| AACGACGTGTGCCCGATACC+TGG | 0.512377 | 7_2:-20324499 | Msa1052140:CDS |
| AGTGAGAGCAATGACAAAAG+TGG | 0.514444 | 7_2:-20326644 | None:intergenic |
| TACTGCATCTCAGCTTGCAT+TGG | 0.515172 | 7_2:-20324542 | Msa1052140:CDS |
| AATGAACTGGCCACAAAGAA+GGG | 0.518216 | 7_2:-20324568 | Msa1052140:CDS |
| CTCAAGAAACTTGTTGAAGA+GGG | 0.520528 | 7_2:-20325877 | Msa1052140:CDS |
| TCGTCTTCCGATTGAAATCA+CGG | 0.531137 | 7_2:-20326099 | Msa1052140:intron |
| TCTTCTGATTGTTGCAGGCG+AGG | 0.536060 | 7_2:+20325825 | None:intergenic |
| CACCAGATTGTATGGCATGA+TGG | 0.536537 | 7_2:+20326503 | None:intergenic |
| TAGTTGCATATAGTCCTCTT+GGG | 0.540181 | 7_2:-20325430 | Msa1052140:CDS |
| GCATATAGTCCTCTTGGGCG+AGG | 0.551187 | 7_2:-20325425 | Msa1052140:CDS |
| ATGTCAGGTTCAGGCTTAGG+AGG | 0.557823 | 7_2:+20326538 | None:intergenic |
| GTGAGAGCAATGACAAAAGT+GGG | 0.558741 | 7_2:-20326643 | None:intergenic |
| GAGGGGAAAATAAAATACAT+AGG | 0.559341 | 7_2:-20325859 | Msa1052140:CDS |
| TGGATGAGAGCAATCATGTC+AGG | 0.561182 | 7_2:+20326523 | None:intergenic |
| CTATGTGAGAGAAGCTTGTG+AGG | 0.571648 | 7_2:-20326183 | Msa1052140:CDS |
| GAGAACTTGAATCAAAACAT+TGG | 0.571832 | 7_2:-20324463 | Msa1052140:CDS |
| GAAGAACTTCATTGGTGTGA+GGG | 0.571972 | 7_2:+20326449 | None:intergenic |
| GCTCAAGAAACTTGTTGAAG+AGG | 0.576635 | 7_2:-20325878 | Msa1052140:CDS |
| CATGCAACCAAGTCCTTGCA+AGG | 0.582983 | 7_2:+20326582 | None:intergenic |
| GTTAGGATCACAAGGGATGG+TGG | 0.590177 | 7_2:-20326611 | Msa1052140:CDS |
| TAAGAGTGGTAGATATGTAG+AGG | 0.597868 | 7_2:-20324377 | Msa1052140:CDS |
| TTAGCAAATGCTGTTAAGAG+TGG | 0.598227 | 7_2:-20324391 | Msa1052140:CDS |
| ACTTGCAACAGGATGACTAC+AGG | 0.598957 | 7_2:-20325370 | Msa1052140:CDS |
| TAACAGCTGTGCAGTTGGAG+TGG | 0.606322 | 7_2:-20325783 | Msa1052140:CDS |
| ATTGTGGAATAGGCTTTGAA+GGG | 0.607262 | 7_2:-20326287 | Msa1052140:intron |
| TGCAGTTGGAGTGGTCATTG+TGG | 0.610140 | 7_2:-20325774 | Msa1052140:CDS |
| ATGTAGAGGATACAAGTACA+TGG | 0.611228 | 7_2:-20324363 | Msa1052140:CDS |
| AGAATGAAGTTAGGATCACA+AGG | 0.616212 | 7_2:-20326619 | Msa1052140:CDS |
| GAAGTTAGGATCACAAGGGA+TGG | 0.617934 | 7_2:-20326614 | Msa1052140:CDS |
| GAAAAGAATCCTCGCCCAAG+AGG | 0.632204 | 7_2:+20325416 | None:intergenic |
| ATGGTGGAAGTATCCTTGCA+AGG | 0.635590 | 7_2:-20326595 | Msa1052140:CDS |
| AGAAGAACTTCATTGGTGTG+AGG | 0.636443 | 7_2:+20326448 | None:intergenic |
| GCTTTCCAAGAAGAGAGTGG+TGG | 0.651055 | 7_2:+20324325 | None:intergenic |
| TCAAGAAACTTGTTGAAGAG+GGG | 0.653792 | 7_2:-20325876 | Msa1052140:CDS |
| ATTGTGGTCAAGAGATGTCG+AGG | 0.654297 | 7_2:-20325758 | Msa1052140:CDS |
| TATGTGAGAGAAGCTTGTGA+GGG | 0.666442 | 7_2:-20326182 | Msa1052140:CDS |
| GCAACAGGATGACTACAGGA+AGG | 0.666822 | 7_2:-20325366 | Msa1052140:intron |
| AAAATACATAGGTTTGTCCG+AGG | 0.673641 | 7_2:-20325848 | Msa1052140:CDS |
| TTGGCATGGCTTCATCACCA+AGG | 0.680145 | 7_2:-20324523 | Msa1052140:CDS |
| GCAGCTTTCCAAGAAGAGAG+TGG | 0.687488 | 7_2:+20324322 | None:intergenic |
| GAAGAGAAATATGAGATCTG+TGG | 0.699778 | 7_2:-20326215 | Msa1052140:CDS |
| GAATGAAGTTAGGATCACAA+GGG | 0.757296 | 7_2:-20326618 | Msa1052140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTTGATTTAAATTTC+TGG | - | chr7_2:20324550-20324569 | Msa1052140:CDS | 15.0% |
| !!! | TTCTTTTGATTTAAATTTCT+GGG | - | chr7_2:20324551-20324570 | Msa1052140:CDS | 15.0% |
| !! | AAAAATTAAACTAATCTAAC+AGG | - | chr7_2:20324959-20324978 | Msa1052140:intron | 15.0% |
| !! | AAAATTAAACTAATCTAACA+GGG | - | chr7_2:20324960-20324979 | Msa1052140:intron | 15.0% |
| !! | TAAAAATTAAAAACATTGGA+TGG | - | chr7_2:20326066-20326085 | Msa1052140:intron | 15.0% |
| !!! | TTTCTTTTGATTTAAATTTC+TGG | - | chr7_2:20324550-20324569 | Msa1052140:CDS | 15.0% |
| !!! | TTCTTTTGATTTAAATTTCT+GGG | - | chr7_2:20324551-20324570 | Msa1052140:CDS | 15.0% |
| !! | AAAAATTAAACTAATCTAAC+AGG | - | chr7_2:20324959-20324978 | Msa1052140:intron | 15.0% |
| !! | AAAATTAAACTAATCTAACA+GGG | - | chr7_2:20324960-20324979 | Msa1052140:intron | 15.0% |
| !! | TAAAAATTAAAAACATTGGA+TGG | - | chr7_2:20326066-20326085 | Msa1052140:intron | 15.0% |
| !! | AATCAAAAGAAAAGCTAAAA+GGG | + | chr7_2:20324542-20324561 | None:intergenic | 20.0% |
| !! | AAATCAAAAGAAAAGCTAAA+AGG | + | chr7_2:20324543-20324562 | None:intergenic | 20.0% |
| !!! | TTTTCTTCCATAAAACAATT+TGG | - | chr7_2:20325749-20325768 | Msa1052140:CDS | 20.0% |
| !! | TTTCTTCCATAAAACAATTT+GGG | - | chr7_2:20325750-20325769 | Msa1052140:CDS | 20.0% |
| !!! | CAAGTCTTAGTTTTTTTAAA+AGG | - | chr7_2:20325916-20325935 | Msa1052140:intron | 20.0% |
| !!! | TTTTCATCATTTCATTCATT+AGG | - | chr7_2:20326115-20326134 | Msa1052140:CDS | 20.0% |
| !!! | TATTTTACACAAGTTCTTTA+TGG | - | chr7_2:20326161-20326180 | Msa1052140:CDS | 20.0% |
| !!! | ATTTTACAAACATGCTTAAA+AGG | + | chr7_2:20326283-20326302 | None:intergenic | 20.0% |
| !! | AATCAAAAGAAAAGCTAAAA+GGG | + | chr7_2:20324542-20324561 | None:intergenic | 20.0% |
| !! | AAATCAAAAGAAAAGCTAAA+AGG | + | chr7_2:20324543-20324562 | None:intergenic | 20.0% |
| !!! | TTTTCTTCCATAAAACAATT+TGG | - | chr7_2:20325749-20325768 | Msa1052140:CDS | 20.0% |
| !! | TTTCTTCCATAAAACAATTT+GGG | - | chr7_2:20325750-20325769 | Msa1052140:CDS | 20.0% |
| !!! | CAAGTCTTAGTTTTTTTAAA+AGG | - | chr7_2:20325916-20325935 | Msa1052140:intron | 20.0% |
| !!! | TTTTCATCATTTCATTCATT+AGG | - | chr7_2:20326115-20326134 | Msa1052140:CDS | 20.0% |
| !!! | TATTTTACACAAGTTCTTTA+TGG | - | chr7_2:20326161-20326180 | Msa1052140:CDS | 20.0% |
| !!! | ATTTTACAAACATGCTTAAA+AGG | + | chr7_2:20326283-20326302 | None:intergenic | 20.0% |
| !!! | TATGATTGTGAATTTTGATG+AGG | - | chr7_2:20324623-20324642 | Msa1052140:CDS | 25.0% |
| !! | GTTAATTTGGCTACAAAATT+TGG | - | chr7_2:20324689-20324708 | Msa1052140:intron | 25.0% |
| !!! | TGTGATTACTTCAACTTTTT+TGG | - | chr7_2:20325018-20325037 | Msa1052140:intron | 25.0% |
| !!! | TTTGGTTTTCTTTGTAAGAT+TGG | - | chr7_2:20325036-20325055 | Msa1052140:intron | 25.0% |
| !!! | TTGGTTTTCTTTGTAAGATT+GGG | - | chr7_2:20325037-20325056 | Msa1052140:intron | 25.0% |
| ! | TTGTATCAGATAGAGAAAAA+TGG | + | chr7_2:20325270-20325289 | None:intergenic | 25.0% |
| ! | ATTCAAATTGTAAGCATGTT+TGG | + | chr7_2:20325417-20325436 | None:intergenic | 25.0% |
| ! | ATGCTTACAATTTGAATTGT+TGG | - | chr7_2:20325420-20325439 | Msa1052140:CDS | 25.0% |
| !! | TGAGCTATAATTTTCTTTCT+AGG | - | chr7_2:20325471-20325490 | Msa1052140:intron | 25.0% |
| !! | GAGCTATAATTTTCTTTCTA+GGG | - | chr7_2:20325472-20325491 | Msa1052140:intron | 25.0% |
| ! | TCATTGATGTATGACATTAA+AGG | + | chr7_2:20325700-20325719 | None:intergenic | 25.0% |
| ! | AAAAACTAAGACTTGTCATA+GGG | + | chr7_2:20325911-20325930 | None:intergenic | 25.0% |
| ! | AAAAAACTAAGACTTGTCAT+AGG | + | chr7_2:20325912-20325931 | None:intergenic | 25.0% |
| ! | TATATACATGCATGAAACAA+AGG | + | chr7_2:20326143-20326162 | None:intergenic | 25.0% |
| ! | ATTTGTGTGTCTTGTAAATT+AGG | - | chr7_2:20326240-20326259 | Msa1052140:CDS | 25.0% |
| ! | TTTGTGTGTCTTGTAAATTA+GGG | - | chr7_2:20326241-20326260 | Msa1052140:CDS | 25.0% |
| ! | ATGTTTGTAAAATATGTTGC+AGG | - | chr7_2:20326290-20326309 | Msa1052140:intron | 25.0% |
| !!! | TTGATTCAAGTTCTCAATTT+TGG | + | chr7_2:20326472-20326491 | None:intergenic | 25.0% |
| !!! | TATGATTGTGAATTTTGATG+AGG | - | chr7_2:20324623-20324642 | Msa1052140:CDS | 25.0% |
| !! | GTTAATTTGGCTACAAAATT+TGG | - | chr7_2:20324689-20324708 | Msa1052140:intron | 25.0% |
| !!! | TGTGATTACTTCAACTTTTT+TGG | - | chr7_2:20325018-20325037 | Msa1052140:intron | 25.0% |
| !!! | TTTGGTTTTCTTTGTAAGAT+TGG | - | chr7_2:20325036-20325055 | Msa1052140:intron | 25.0% |
| !!! | TTGGTTTTCTTTGTAAGATT+GGG | - | chr7_2:20325037-20325056 | Msa1052140:intron | 25.0% |
| ! | TTGTATCAGATAGAGAAAAA+TGG | + | chr7_2:20325270-20325289 | None:intergenic | 25.0% |
| ! | ATTCAAATTGTAAGCATGTT+TGG | + | chr7_2:20325417-20325436 | None:intergenic | 25.0% |
| ! | ATGCTTACAATTTGAATTGT+TGG | - | chr7_2:20325420-20325439 | Msa1052140:CDS | 25.0% |
| !! | TGAGCTATAATTTTCTTTCT+AGG | - | chr7_2:20325471-20325490 | Msa1052140:intron | 25.0% |
| !! | GAGCTATAATTTTCTTTCTA+GGG | - | chr7_2:20325472-20325491 | Msa1052140:intron | 25.0% |
| ! | TCATTGATGTATGACATTAA+AGG | + | chr7_2:20325700-20325719 | None:intergenic | 25.0% |
| ! | AAAAACTAAGACTTGTCATA+GGG | + | chr7_2:20325911-20325930 | None:intergenic | 25.0% |
| ! | AAAAAACTAAGACTTGTCAT+AGG | + | chr7_2:20325912-20325931 | None:intergenic | 25.0% |
| ! | TATATACATGCATGAAACAA+AGG | + | chr7_2:20326143-20326162 | None:intergenic | 25.0% |
| ! | ATTTGTGTGTCTTGTAAATT+AGG | - | chr7_2:20326240-20326259 | Msa1052140:CDS | 25.0% |
| ! | TTTGTGTGTCTTGTAAATTA+GGG | - | chr7_2:20326241-20326260 | Msa1052140:CDS | 25.0% |
| ! | ATGTTTGTAAAATATGTTGC+AGG | - | chr7_2:20326290-20326309 | Msa1052140:intron | 25.0% |
| !!! | TTGATTCAAGTTCTCAATTT+TGG | + | chr7_2:20326472-20326491 | None:intergenic | 25.0% |
| !! | TTGTGAATTTTGATGAGGTT+TGG | - | chr7_2:20324628-20324647 | Msa1052140:CDS | 30.0% |
| AGTGAGAGAGAAAGTTAATT+TGG | - | chr7_2:20324676-20324695 | Msa1052140:intron | 30.0% | |
| AATCAAACCGTGATTTCAAT+CGG | + | chr7_2:20324851-20324870 | None:intergenic | 30.0% | |
| CCAAATCAGAGAAATGAAAA+GGG | + | chr7_2:20324877-20324896 | None:intergenic | 30.0% | |
| ACCAAATCAGAGAAATGAAA+AGG | + | chr7_2:20324878-20324897 | None:intergenic | 30.0% | |
| !!! | TCATTTCTCTGATTTGGTTT+TGG | - | chr7_2:20324880-20324899 | Msa1052140:intron | 30.0% |
| ! | TGGTTTTCTTTGTAAGATTG+GGG | - | chr7_2:20325038-20325057 | Msa1052140:intron | 30.0% |
| GAGGGGAAAATAAAATACAT+AGG | - | chr7_2:20325081-20325100 | Msa1052140:intron | 30.0% | |
| !! | AATTTTCTTTCTAGGGAACT+TGG | - | chr7_2:20325479-20325498 | Msa1052140:intron | 30.0% |
| ATTGTCTTAAACTTCTGTGA+AGG | + | chr7_2:20325613-20325632 | None:intergenic | 30.0% | |
| !! | TCACAACCATGGATTATTTT+AGG | - | chr7_2:20325672-20325691 | Msa1052140:intron | 30.0% |
| !! | CACAACCATGGATTATTTTA+GGG | - | chr7_2:20325673-20325692 | Msa1052140:intron | 30.0% |
| !! | CCTATTCCCAAATTGTTTTA+TGG | + | chr7_2:20325759-20325778 | None:intergenic | 30.0% |
| CCATAAAACAATTTGGGAAT+AGG | - | chr7_2:20325756-20325775 | Msa1052140:CDS | 30.0% | |
| AAAACTAAGACTTGTCATAG+GGG | + | chr7_2:20325910-20325929 | None:intergenic | 30.0% | |
| ATTTGACAAAGTCAATGAAC+TGG | - | chr7_2:20326359-20326378 | Msa1052140:intron | 30.0% | |
| !! | ATTCAAGTTCTCAATTTTGG+TGG | + | chr7_2:20326469-20326488 | None:intergenic | 30.0% |
| GAGAACTTGAATCAAAACAT+TGG | - | chr7_2:20326477-20326496 | Msa1052140:CDS | 30.0% | |
| AAACTAACACCAGAAGAAAT+GGG | - | chr7_2:20326513-20326532 | Msa1052140:CDS | 30.0% | |
| !! | TTGTGAATTTTGATGAGGTT+TGG | - | chr7_2:20324628-20324647 | Msa1052140:CDS | 30.0% |
| AGTGAGAGAGAAAGTTAATT+TGG | - | chr7_2:20324676-20324695 | Msa1052140:intron | 30.0% | |
| AATCAAACCGTGATTTCAAT+CGG | + | chr7_2:20324851-20324870 | None:intergenic | 30.0% | |
| CCAAATCAGAGAAATGAAAA+GGG | + | chr7_2:20324877-20324896 | None:intergenic | 30.0% | |
| ACCAAATCAGAGAAATGAAA+AGG | + | chr7_2:20324878-20324897 | None:intergenic | 30.0% | |
| !!! | TCATTTCTCTGATTTGGTTT+TGG | - | chr7_2:20324880-20324899 | Msa1052140:intron | 30.0% |
| ! | TGGTTTTCTTTGTAAGATTG+GGG | - | chr7_2:20325038-20325057 | Msa1052140:intron | 30.0% |
| GAGGGGAAAATAAAATACAT+AGG | - | chr7_2:20325081-20325100 | Msa1052140:intron | 30.0% | |
| !! | AATTTTCTTTCTAGGGAACT+TGG | - | chr7_2:20325479-20325498 | Msa1052140:intron | 30.0% |
| ATTGTCTTAAACTTCTGTGA+AGG | + | chr7_2:20325613-20325632 | None:intergenic | 30.0% | |
| !! | TCACAACCATGGATTATTTT+AGG | - | chr7_2:20325672-20325691 | Msa1052140:intron | 30.0% |
| !! | CACAACCATGGATTATTTTA+GGG | - | chr7_2:20325673-20325692 | Msa1052140:intron | 30.0% |
| !! | CCTATTCCCAAATTGTTTTA+TGG | + | chr7_2:20325759-20325778 | None:intergenic | 30.0% |
| CCATAAAACAATTTGGGAAT+AGG | - | chr7_2:20325756-20325775 | Msa1052140:CDS | 30.0% | |
| AAAACTAAGACTTGTCATAG+GGG | + | chr7_2:20325910-20325929 | None:intergenic | 30.0% | |
| ATTTGACAAAGTCAATGAAC+TGG | - | chr7_2:20326359-20326378 | Msa1052140:intron | 30.0% | |
| !! | ATTCAAGTTCTCAATTTTGG+TGG | + | chr7_2:20326469-20326488 | None:intergenic | 30.0% |
| GAGAACTTGAATCAAAACAT+TGG | - | chr7_2:20326477-20326496 | Msa1052140:CDS | 30.0% | |
| AAACTAACACCAGAAGAAAT+GGG | - | chr7_2:20326513-20326532 | Msa1052140:CDS | 30.0% | |
| AAAGTGGGAAGAATGAAGTT+AGG | - | chr7_2:20324312-20324331 | Msa1052140:CDS | 35.0% | |
| AGAATGAAGTTAGGATCACA+AGG | - | chr7_2:20324321-20324340 | Msa1052140:CDS | 35.0% | |
| GAATGAAGTTAGGATCACAA+GGG | - | chr7_2:20324322-20324341 | Msa1052140:CDS | 35.0% | |
| AAAAGTGACACCAGATTGTA+TGG | + | chr7_2:20324448-20324467 | None:intergenic | 35.0% | |
| CTTTCCAAGAAGAACTTCAT+TGG | + | chr7_2:20324502-20324521 | None:intergenic | 35.0% | |
| CAATGAAGTTCTTCTTGGAA+AGG | - | chr7_2:20324500-20324519 | Msa1052140:CDS | 35.0% | |
| TTGATGAGGTTTGGAAATTG+TGG | - | chr7_2:20324637-20324656 | Msa1052140:intron | 35.0% | |
| AGGTTTGGAAATTGTGGAAT+AGG | - | chr7_2:20324643-20324662 | Msa1052140:intron | 35.0% | |
| ! | AATTGTGGAATAGGCTTTGA+AGG | - | chr7_2:20324652-20324671 | Msa1052140:intron | 35.0% |
| !! | ATTGTGGAATAGGCTTTGAA+GGG | - | chr7_2:20324653-20324672 | Msa1052140:intron | 35.0% |
| GAAGAGAAATATGAGATCTG+TGG | - | chr7_2:20324725-20324744 | Msa1052140:intron | 35.0% | |
| ! | CCCTTTTCATTTCTCTGATT+TGG | - | chr7_2:20324874-20324893 | Msa1052140:intron | 35.0% |
| ! | AATGAGTACCATGAAGCATT+AGG | - | chr7_2:20324910-20324929 | Msa1052140:intron | 35.0% |
| !! | TAGTTTTGCCTAATGCTTCA+TGG | + | chr7_2:20324921-20324940 | None:intergenic | 35.0% |
| !! | CTCAAGAAACTTGTTGAAGA+GGG | - | chr7_2:20325063-20325082 | Msa1052140:intron | 35.0% |
| !! | TCAAGAAACTTGTTGAAGAG+GGG | - | chr7_2:20325064-20325083 | Msa1052140:intron | 35.0% |
| AAAATACATAGGTTTGTCCG+AGG | - | chr7_2:20325092-20325111 | Msa1052140:intron | 35.0% | |
| TAAATATCACACCTGCAAGT+TGG | + | chr7_2:20325219-20325238 | None:intergenic | 35.0% | |
| ATAGTTGCATATAGTCCTCT+TGG | - | chr7_2:20325509-20325528 | Msa1052140:intron | 35.0% | |
| TAGTTGCATATAGTCCTCTT+GGG | - | chr7_2:20325510-20325529 | Msa1052140:intron | 35.0% | |
| AAGGACCCTAAAATAATCCA+TGG | + | chr7_2:20325681-20325700 | None:intergenic | 35.0% | |
| ATCAACACACATTGATCACA+TGG | + | chr7_2:20325864-20325883 | None:intergenic | 35.0% | |
| TGGGACTAAGAGGTTAATTA+GGG | + | chr7_2:20325963-20325982 | None:intergenic | 35.0% | |
| ATGGGACTAAGAGGTTAATT+AGG | + | chr7_2:20325964-20325983 | None:intergenic | 35.0% | |
| ! | ACATTGGATGGTTTGAAACA+AGG | - | chr7_2:20326078-20326097 | Msa1052140:intron | 35.0% |
| GAAACAAGGAAAATGTGATG+TGG | - | chr7_2:20326092-20326111 | Msa1052140:intron | 35.0% | |
| CATGCTTAAAAGGCAGAATA+TGG | + | chr7_2:20326273-20326292 | None:intergenic | 35.0% | |
| GAAACTAACACCAGAAGAAA+TGG | - | chr7_2:20326512-20326531 | Msa1052140:CDS | 35.0% | |
| TTAGCAAATGCTGTTAAGAG+TGG | - | chr7_2:20326549-20326568 | Msa1052140:CDS | 35.0% | |
| TAAGAGTGGTAGATATGTAG+AGG | - | chr7_2:20326563-20326582 | Msa1052140:CDS | 35.0% | |
| ATGTAGAGGATACAAGTACA+TGG | - | chr7_2:20326577-20326596 | Msa1052140:CDS | 35.0% | |
| AAAGTGGGAAGAATGAAGTT+AGG | - | chr7_2:20324312-20324331 | Msa1052140:CDS | 35.0% | |
| AGAATGAAGTTAGGATCACA+AGG | - | chr7_2:20324321-20324340 | Msa1052140:CDS | 35.0% | |
| GAATGAAGTTAGGATCACAA+GGG | - | chr7_2:20324322-20324341 | Msa1052140:CDS | 35.0% | |
| AAAAGTGACACCAGATTGTA+TGG | + | chr7_2:20324448-20324467 | None:intergenic | 35.0% | |
| CTTTCCAAGAAGAACTTCAT+TGG | + | chr7_2:20324502-20324521 | None:intergenic | 35.0% | |
| CAATGAAGTTCTTCTTGGAA+AGG | - | chr7_2:20324500-20324519 | Msa1052140:CDS | 35.0% | |
| TTGATGAGGTTTGGAAATTG+TGG | - | chr7_2:20324637-20324656 | Msa1052140:intron | 35.0% | |
| AGGTTTGGAAATTGTGGAAT+AGG | - | chr7_2:20324643-20324662 | Msa1052140:intron | 35.0% | |
| ! | AATTGTGGAATAGGCTTTGA+AGG | - | chr7_2:20324652-20324671 | Msa1052140:intron | 35.0% |
| !! | ATTGTGGAATAGGCTTTGAA+GGG | - | chr7_2:20324653-20324672 | Msa1052140:intron | 35.0% |
| GAAGAGAAATATGAGATCTG+TGG | - | chr7_2:20324725-20324744 | Msa1052140:intron | 35.0% | |
| ! | CCCTTTTCATTTCTCTGATT+TGG | - | chr7_2:20324874-20324893 | Msa1052140:intron | 35.0% |
| ! | AATGAGTACCATGAAGCATT+AGG | - | chr7_2:20324910-20324929 | Msa1052140:intron | 35.0% |
| !! | TAGTTTTGCCTAATGCTTCA+TGG | + | chr7_2:20324921-20324940 | None:intergenic | 35.0% |
| !! | CTCAAGAAACTTGTTGAAGA+GGG | - | chr7_2:20325063-20325082 | Msa1052140:intron | 35.0% |
| !! | TCAAGAAACTTGTTGAAGAG+GGG | - | chr7_2:20325064-20325083 | Msa1052140:intron | 35.0% |
| AAAATACATAGGTTTGTCCG+AGG | - | chr7_2:20325092-20325111 | Msa1052140:intron | 35.0% | |
| TAAATATCACACCTGCAAGT+TGG | + | chr7_2:20325219-20325238 | None:intergenic | 35.0% | |
| ATAGTTGCATATAGTCCTCT+TGG | - | chr7_2:20325509-20325528 | Msa1052140:intron | 35.0% | |
| TAGTTGCATATAGTCCTCTT+GGG | - | chr7_2:20325510-20325529 | Msa1052140:intron | 35.0% | |
| AAGGACCCTAAAATAATCCA+TGG | + | chr7_2:20325681-20325700 | None:intergenic | 35.0% | |
| ATCAACACACATTGATCACA+TGG | + | chr7_2:20325864-20325883 | None:intergenic | 35.0% | |
| TGGGACTAAGAGGTTAATTA+GGG | + | chr7_2:20325963-20325982 | None:intergenic | 35.0% | |
| ATGGGACTAAGAGGTTAATT+AGG | + | chr7_2:20325964-20325983 | None:intergenic | 35.0% | |
| ! | ACATTGGATGGTTTGAAACA+AGG | - | chr7_2:20326078-20326097 | Msa1052140:intron | 35.0% |
| GAAACAAGGAAAATGTGATG+TGG | - | chr7_2:20326092-20326111 | Msa1052140:intron | 35.0% | |
| CATGCTTAAAAGGCAGAATA+TGG | + | chr7_2:20326273-20326292 | None:intergenic | 35.0% | |
| GAAACTAACACCAGAAGAAA+TGG | - | chr7_2:20326512-20326531 | Msa1052140:CDS | 35.0% | |
| TTAGCAAATGCTGTTAAGAG+TGG | - | chr7_2:20326549-20326568 | Msa1052140:CDS | 35.0% | |
| TAAGAGTGGTAGATATGTAG+AGG | - | chr7_2:20326563-20326582 | Msa1052140:CDS | 35.0% | |
| ATGTAGAGGATACAAGTACA+TGG | - | chr7_2:20326577-20326596 | Msa1052140:CDS | 35.0% | |
| ATGAGCATGTCTGCTTTCTA+TGG | - | chr7_2:20324378-20324397 | Msa1052140:CDS | 40.0% | |
| ATCCATCATGCCATACAATC+TGG | - | chr7_2:20324435-20324454 | Msa1052140:CDS | 40.0% | |
| CTTGACACTTCTGACTTCTA+TGG | - | chr7_2:20324468-20324487 | Msa1052140:CDS | 40.0% | |
| GAAGAACTTCATTGGTGTGA+GGG | + | chr7_2:20324494-20324513 | None:intergenic | 40.0% | |
| AGAAGAACTTCATTGGTGTG+AGG | + | chr7_2:20324495-20324514 | None:intergenic | 40.0% | |
| CACACCAATGAAGTTCTTCT+TGG | - | chr7_2:20324495-20324514 | Msa1052140:CDS | 40.0% | |
| TATGTGAGAGAAGCTTGTGA+GGG | - | chr7_2:20324758-20324777 | Msa1052140:intron | 40.0% | |
| TCGTCTTCCGATTGAAATCA+CGG | - | chr7_2:20324841-20324860 | Msa1052140:intron | 40.0% | |
| !! | GCTCAAGAAACTTGTTGAAG+AGG | - | chr7_2:20325062-20325081 | Msa1052140:intron | 40.0% |
| AAGACGTAATTCCAACTTGC+AGG | - | chr7_2:20325205-20325224 | Msa1052140:intron | 40.0% | |
| ! | CTTTCTAGGGAACTTGGAAT+TGG | - | chr7_2:20325485-20325504 | Msa1052140:intron | 40.0% |
| GGGAATAGGTGTAACAGTAA+TGG | - | chr7_2:20325770-20325789 | Msa1052140:CDS | 40.0% | |
| TGCTGCTAGTGAACACAATT+CGG | - | chr7_2:20325807-20325826 | Msa1052140:CDS | 40.0% | |
| GGGGTTATCATGTAGATTGT+AGG | + | chr7_2:20325891-20325910 | None:intergenic | 40.0% | |
| AAGAGGTTAATTAGGGGAAG+TGG | + | chr7_2:20325956-20325975 | None:intergenic | 40.0% | |
| GGGACTAAGAGGTTAATTAG+GGG | + | chr7_2:20325962-20325981 | None:intergenic | 40.0% | |
| GATATCAACATGGGACTAAG+AGG | + | chr7_2:20325973-20325992 | None:intergenic | 40.0% | |
| GTTGGTCATCGAATATCTTC+TGG | + | chr7_2:20326003-20326022 | None:intergenic | 40.0% | |
| !!! | AGGTTTTCAGGTTGAAATCG+TGG | + | chr7_2:20326321-20326340 | None:intergenic | 40.0% |
| ATATAGTCTGATTCTGCTGC+AGG | + | chr7_2:20326341-20326360 | None:intergenic | 40.0% | |
| AATGAACTGGCCACAAAGAA+GGG | - | chr7_2:20326372-20326391 | Msa1052140:intron | 40.0% | |
| !! | ATTTTGGTGGTTCCAGGTAT+CGG | + | chr7_2:20326456-20326475 | None:intergenic | 40.0% |
| !! | TTCTCAATTTTGGTGGTTCC+AGG | + | chr7_2:20326462-20326481 | None:intergenic | 40.0% |
| TCAAGTTCTCCCATTTCTTC+TGG | + | chr7_2:20326525-20326544 | None:intergenic | 40.0% | |
| ATGAGCATGTCTGCTTTCTA+TGG | - | chr7_2:20324378-20324397 | Msa1052140:CDS | 40.0% | |
| ATCCATCATGCCATACAATC+TGG | - | chr7_2:20324435-20324454 | Msa1052140:CDS | 40.0% | |
| CTTGACACTTCTGACTTCTA+TGG | - | chr7_2:20324468-20324487 | Msa1052140:CDS | 40.0% | |
| GAAGAACTTCATTGGTGTGA+GGG | + | chr7_2:20324494-20324513 | None:intergenic | 40.0% | |
| AGAAGAACTTCATTGGTGTG+AGG | + | chr7_2:20324495-20324514 | None:intergenic | 40.0% | |
| CACACCAATGAAGTTCTTCT+TGG | - | chr7_2:20324495-20324514 | Msa1052140:CDS | 40.0% | |
| TATGTGAGAGAAGCTTGTGA+GGG | - | chr7_2:20324758-20324777 | Msa1052140:intron | 40.0% | |
| TCGTCTTCCGATTGAAATCA+CGG | - | chr7_2:20324841-20324860 | Msa1052140:intron | 40.0% | |
| !! | GCTCAAGAAACTTGTTGAAG+AGG | - | chr7_2:20325062-20325081 | Msa1052140:intron | 40.0% |
| AAGACGTAATTCCAACTTGC+AGG | - | chr7_2:20325205-20325224 | Msa1052140:intron | 40.0% | |
| ! | CTTTCTAGGGAACTTGGAAT+TGG | - | chr7_2:20325485-20325504 | Msa1052140:intron | 40.0% |
| GGGAATAGGTGTAACAGTAA+TGG | - | chr7_2:20325770-20325789 | Msa1052140:CDS | 40.0% | |
| TGCTGCTAGTGAACACAATT+CGG | - | chr7_2:20325807-20325826 | Msa1052140:CDS | 40.0% | |
| GGGGTTATCATGTAGATTGT+AGG | + | chr7_2:20325891-20325910 | None:intergenic | 40.0% | |
| AAGAGGTTAATTAGGGGAAG+TGG | + | chr7_2:20325956-20325975 | None:intergenic | 40.0% | |
| GGGACTAAGAGGTTAATTAG+GGG | + | chr7_2:20325962-20325981 | None:intergenic | 40.0% | |
| GATATCAACATGGGACTAAG+AGG | + | chr7_2:20325973-20325992 | None:intergenic | 40.0% | |
| GTTGGTCATCGAATATCTTC+TGG | + | chr7_2:20326003-20326022 | None:intergenic | 40.0% | |
| !!! | AGGTTTTCAGGTTGAAATCG+TGG | + | chr7_2:20326321-20326340 | None:intergenic | 40.0% |
| ATATAGTCTGATTCTGCTGC+AGG | + | chr7_2:20326341-20326360 | None:intergenic | 40.0% | |
| AATGAACTGGCCACAAAGAA+GGG | - | chr7_2:20326372-20326391 | Msa1052140:intron | 40.0% | |
| !! | ATTTTGGTGGTTCCAGGTAT+CGG | + | chr7_2:20326456-20326475 | None:intergenic | 40.0% |
| !! | TTCTCAATTTTGGTGGTTCC+AGG | + | chr7_2:20326462-20326481 | None:intergenic | 40.0% |
| TCAAGTTCTCCCATTTCTTC+TGG | + | chr7_2:20326525-20326544 | None:intergenic | 40.0% | |
| GAAGTTAGGATCACAAGGGA+TGG | - | chr7_2:20324326-20324345 | Msa1052140:CDS | 45.0% | |
| !! | ATGGTGGAAGTATCCTTGCA+AGG | - | chr7_2:20324345-20324364 | Msa1052140:CDS | 45.0% |
| ! | GAAGTATCCTTGCAAGGACT+TGG | - | chr7_2:20324351-20324370 | Msa1052140:CDS | 45.0% |
| ATCATGTCAGGTTCAGGCTT+AGG | + | chr7_2:20324408-20324427 | None:intergenic | 45.0% | |
| AGAGCAATCATGTCAGGTTC+AGG | + | chr7_2:20324414-20324433 | None:intergenic | 45.0% | |
| TGGATGAGAGCAATCATGTC+AGG | + | chr7_2:20324420-20324439 | None:intergenic | 45.0% | |
| CACCAGATTGTATGGCATGA+TGG | + | chr7_2:20324440-20324459 | None:intergenic | 45.0% | |
| TATGAGATCTGTGGTGATCC+AGG | - | chr7_2:20324734-20324753 | Msa1052140:intron | 45.0% | |
| CTATGTGAGAGAAGCTTGTG+AGG | - | chr7_2:20324757-20324776 | Msa1052140:intron | 45.0% | |
| TGTGCTCTTCTGATTGTTGC+AGG | + | chr7_2:20325123-20325142 | None:intergenic | 45.0% | |
| TCCAATAACAGCTGTGCAGT+TGG | - | chr7_2:20325152-20325171 | Msa1052140:intron | 45.0% | |
| TCCAACTGCACAGCTGTTAT+TGG | + | chr7_2:20325156-20325175 | None:intergenic | 45.0% | |
| ATTGTGGTCAAGAGATGTCG+AGG | - | chr7_2:20325182-20325201 | Msa1052140:intron | 45.0% | |
| TGTTCGTGACGTCTTAGTGT+CGG | - | chr7_2:20325388-20325407 | Msa1052140:CDS | 45.0% | |
| ! | TGGGCGAGGATTCTTTTCAT+CGG | - | chr7_2:20325529-20325548 | Msa1052140:intron | 45.0% |
| GTTGCTTGACAACTTGCAAC+AGG | - | chr7_2:20325559-20325578 | Msa1052140:intron | 45.0% | |
| ACTTGCAACAGGATGACTAC+AGG | - | chr7_2:20325570-20325589 | Msa1052140:intron | 45.0% | |
| GATGACTACAGGAAGGTTTG+TGG | - | chr7_2:20325581-20325600 | Msa1052140:intron | 45.0% | |
| CATGGTTGTGAATCACTGCT+AGG | + | chr7_2:20325663-20325682 | None:intergenic | 45.0% | |
| CTAGCAGTGATTCACAACCA+TGG | - | chr7_2:20325661-20325680 | Msa1052140:intron | 45.0% | |
| GGTTAATTAGGGGAAGTGGA+AGG | + | chr7_2:20325952-20325971 | None:intergenic | 45.0% | |
| GGCGGTTCAGATATCAACAT+GGG | + | chr7_2:20325982-20326001 | None:intergenic | 45.0% | |
| TGGCGGTTCAGATATCAACA+TGG | + | chr7_2:20325983-20326002 | None:intergenic | 45.0% | |
| GGTCATCGAATATCTTCTGG+CGG | + | chr7_2:20326000-20326019 | None:intergenic | 45.0% | |
| ! | TGATTCTGCTGCAGGTTTTC+AGG | + | chr7_2:20326333-20326352 | None:intergenic | 45.0% |
| CAATGAACTGGCCACAAAGA+AGG | - | chr7_2:20326371-20326390 | Msa1052140:intron | 45.0% | |
| TGCAGTACATCCCTTCTTTG+TGG | + | chr7_2:20326385-20326404 | None:intergenic | 45.0% | |
| TACTGCATCTCAGCTTGCAT+TGG | - | chr7_2:20326398-20326417 | Msa1052140:CDS | 45.0% | |
| !! | TTTTGGTGGTTCCAGGTATC+GGG | + | chr7_2:20326455-20326474 | None:intergenic | 45.0% |
| ATACTCCACCACTCTCTTCT+TGG | - | chr7_2:20326610-20326629 | Msa1052140:CDS | 45.0% | |
| GAAGTTAGGATCACAAGGGA+TGG | - | chr7_2:20324326-20324345 | Msa1052140:CDS | 45.0% | |
| !! | ATGGTGGAAGTATCCTTGCA+AGG | - | chr7_2:20324345-20324364 | Msa1052140:CDS | 45.0% |
| ! | GAAGTATCCTTGCAAGGACT+TGG | - | chr7_2:20324351-20324370 | Msa1052140:CDS | 45.0% |
| ATCATGTCAGGTTCAGGCTT+AGG | + | chr7_2:20324408-20324427 | None:intergenic | 45.0% | |
| AGAGCAATCATGTCAGGTTC+AGG | + | chr7_2:20324414-20324433 | None:intergenic | 45.0% | |
| TGGATGAGAGCAATCATGTC+AGG | + | chr7_2:20324420-20324439 | None:intergenic | 45.0% | |
| CACCAGATTGTATGGCATGA+TGG | + | chr7_2:20324440-20324459 | None:intergenic | 45.0% | |
| TATGAGATCTGTGGTGATCC+AGG | - | chr7_2:20324734-20324753 | Msa1052140:intron | 45.0% | |
| CTATGTGAGAGAAGCTTGTG+AGG | - | chr7_2:20324757-20324776 | Msa1052140:intron | 45.0% | |
| TGTGCTCTTCTGATTGTTGC+AGG | + | chr7_2:20325123-20325142 | None:intergenic | 45.0% | |
| TCCAATAACAGCTGTGCAGT+TGG | - | chr7_2:20325152-20325171 | Msa1052140:intron | 45.0% | |
| TCCAACTGCACAGCTGTTAT+TGG | + | chr7_2:20325156-20325175 | None:intergenic | 45.0% | |
| ATTGTGGTCAAGAGATGTCG+AGG | - | chr7_2:20325182-20325201 | Msa1052140:intron | 45.0% | |
| TGTTCGTGACGTCTTAGTGT+CGG | - | chr7_2:20325388-20325407 | Msa1052140:CDS | 45.0% | |
| ! | TGGGCGAGGATTCTTTTCAT+CGG | - | chr7_2:20325529-20325548 | Msa1052140:intron | 45.0% |
| GTTGCTTGACAACTTGCAAC+AGG | - | chr7_2:20325559-20325578 | Msa1052140:intron | 45.0% | |
| ACTTGCAACAGGATGACTAC+AGG | - | chr7_2:20325570-20325589 | Msa1052140:intron | 45.0% | |
| GATGACTACAGGAAGGTTTG+TGG | - | chr7_2:20325581-20325600 | Msa1052140:intron | 45.0% | |
| CATGGTTGTGAATCACTGCT+AGG | + | chr7_2:20325663-20325682 | None:intergenic | 45.0% | |
| CTAGCAGTGATTCACAACCA+TGG | - | chr7_2:20325661-20325680 | Msa1052140:intron | 45.0% | |
| GGTTAATTAGGGGAAGTGGA+AGG | + | chr7_2:20325952-20325971 | None:intergenic | 45.0% | |
| GGCGGTTCAGATATCAACAT+GGG | + | chr7_2:20325982-20326001 | None:intergenic | 45.0% | |
| TGGCGGTTCAGATATCAACA+TGG | + | chr7_2:20325983-20326002 | None:intergenic | 45.0% | |
| GGTCATCGAATATCTTCTGG+CGG | + | chr7_2:20326000-20326019 | None:intergenic | 45.0% | |
| ! | TGATTCTGCTGCAGGTTTTC+AGG | + | chr7_2:20326333-20326352 | None:intergenic | 45.0% |
| CAATGAACTGGCCACAAAGA+AGG | - | chr7_2:20326371-20326390 | Msa1052140:intron | 45.0% | |
| TGCAGTACATCCCTTCTTTG+TGG | + | chr7_2:20326385-20326404 | None:intergenic | 45.0% | |
| TACTGCATCTCAGCTTGCAT+TGG | - | chr7_2:20326398-20326417 | Msa1052140:CDS | 45.0% | |
| !! | TTTTGGTGGTTCCAGGTATC+GGG | + | chr7_2:20326455-20326474 | None:intergenic | 45.0% |
| ATACTCCACCACTCTCTTCT+TGG | - | chr7_2:20326610-20326629 | Msa1052140:CDS | 45.0% | |
| !!! | TTATTTTTTAAAATTTTTGT+TGG | + | chr7_2:20326021-20326040 | None:intergenic | 5.0% |
| !! | TTAAAAAATAAATAAATAAC+TGG | - | chr7_2:20326030-20326049 | Msa1052140:intron | 5.0% |
| !! | TTAATAAAAATTAAAAACAT+TGG | - | chr7_2:20326062-20326081 | Msa1052140:intron | 5.0% |
| !!! | TTATTTTTTAAAATTTTTGT+TGG | + | chr7_2:20326021-20326040 | None:intergenic | 5.0% |
| !! | TTAAAAAATAAATAAATAAC+TGG | - | chr7_2:20326030-20326049 | Msa1052140:intron | 5.0% |
| !! | TTAATAAAAATTAAAAACAT+TGG | - | chr7_2:20326062-20326081 | Msa1052140:intron | 5.0% |
| GTTAGGATCACAAGGGATGG+TGG | - | chr7_2:20324329-20324348 | Msa1052140:CDS | 50.0% | |
| CATGCAACCAAGTCCTTGCA+AGG | + | chr7_2:20324361-20324380 | None:intergenic | 50.0% | |
| ATGTCAGGTTCAGGCTTAGG+AGG | + | chr7_2:20324405-20324424 | None:intergenic | 50.0% | |
| CAAGCTTCTCTCACATAGCC+TGG | + | chr7_2:20324755-20324774 | None:intergenic | 50.0% | |
| TCTTCTGATTGTTGCAGGCG+AGG | + | chr7_2:20325118-20325137 | None:intergenic | 50.0% | |
| TAACAGCTGTGCAGTTGGAG+TGG | - | chr7_2:20325157-20325176 | Msa1052140:intron | 50.0% | |
| TGCAGTTGGAGTGGTCATTG+TGG | - | chr7_2:20325166-20325185 | Msa1052140:intron | 50.0% | |
| GAAAAGAATCCTCGCCCAAG+AGG | + | chr7_2:20325527-20325546 | None:intergenic | 50.0% | |
| ! | GGGCGAGGATTCTTTTCATC+GGG | - | chr7_2:20325530-20325549 | Msa1052140:intron | 50.0% |
| GCAACAGGATGACTACAGGA+AGG | - | chr7_2:20325574-20325593 | Msa1052140:intron | 50.0% | |
| ! | CATCTCAGCTTGCATTGGCA+TGG | - | chr7_2:20326403-20326422 | Msa1052140:CDS | 50.0% |
| TTGGCATGGCTTCATCACCA+AGG | - | chr7_2:20326417-20326436 | Msa1052140:CDS | 50.0% | |
| GCTTTCCAAGAAGAGAGTGG+TGG | + | chr7_2:20326618-20326637 | None:intergenic | 50.0% | |
| GCAGCTTTCCAAGAAGAGAG+TGG | + | chr7_2:20326621-20326640 | None:intergenic | 50.0% | |
| GTTAGGATCACAAGGGATGG+TGG | - | chr7_2:20324329-20324348 | Msa1052140:CDS | 50.0% | |
| CATGCAACCAAGTCCTTGCA+AGG | + | chr7_2:20324361-20324380 | None:intergenic | 50.0% | |
| ATGTCAGGTTCAGGCTTAGG+AGG | + | chr7_2:20324405-20324424 | None:intergenic | 50.0% | |
| CAAGCTTCTCTCACATAGCC+TGG | + | chr7_2:20324755-20324774 | None:intergenic | 50.0% | |
| TCTTCTGATTGTTGCAGGCG+AGG | + | chr7_2:20325118-20325137 | None:intergenic | 50.0% | |
| TAACAGCTGTGCAGTTGGAG+TGG | - | chr7_2:20325157-20325176 | Msa1052140:intron | 50.0% | |
| TGCAGTTGGAGTGGTCATTG+TGG | - | chr7_2:20325166-20325185 | Msa1052140:intron | 50.0% | |
| GAAAAGAATCCTCGCCCAAG+AGG | + | chr7_2:20325527-20325546 | None:intergenic | 50.0% | |
| ! | GGGCGAGGATTCTTTTCATC+GGG | - | chr7_2:20325530-20325549 | Msa1052140:intron | 50.0% |
| GCAACAGGATGACTACAGGA+AGG | - | chr7_2:20325574-20325593 | Msa1052140:intron | 50.0% | |
| ! | CATCTCAGCTTGCATTGGCA+TGG | - | chr7_2:20326403-20326422 | Msa1052140:CDS | 50.0% |
| TTGGCATGGCTTCATCACCA+AGG | - | chr7_2:20326417-20326436 | Msa1052140:CDS | 50.0% | |
| GCTTTCCAAGAAGAGAGTGG+TGG | + | chr7_2:20326618-20326637 | None:intergenic | 50.0% | |
| GCAGCTTTCCAAGAAGAGAG+TGG | + | chr7_2:20326621-20326640 | None:intergenic | 50.0% | |
| GCATATAGTCCTCTTGGGCG+AGG | - | chr7_2:20325515-20325534 | Msa1052140:intron | 55.0% | |
| GCATATAGTCCTCTTGGGCG+AGG | - | chr7_2:20325515-20325534 | Msa1052140:intron | 55.0% | |
| GATTGTTGCAGGCGAGGCCT+CGG | + | chr7_2:20325112-20325131 | None:intergenic | 60.0% | |
| TCGGGCACACGTCGTTTCCT+TGG | + | chr7_2:20326437-20326456 | None:intergenic | 60.0% | |
| AACGACGTGTGCCCGATACC+TGG | - | chr7_2:20326441-20326460 | Msa1052140:CDS | 60.0% | |
| GATTGTTGCAGGCGAGGCCT+CGG | + | chr7_2:20325112-20325131 | None:intergenic | 60.0% | |
| TCGGGCACACGTCGTTTCCT+TGG | + | chr7_2:20326437-20326456 | None:intergenic | 60.0% | |
| AACGACGTGTGCCCGATACC+TGG | - | chr7_2:20326441-20326460 | Msa1052140:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 20324306 | 20326656 | 20324306 | ID=Msa1052140;Name=Msa1052140 |
| chr7_2 | mRNA | 20324306 | 20326656 | 20324306 | ID=Msa1052140-mRNA-1;Parent=Msa1052140;Name=Msa1052140-mRNA-1;_AED=0.42;_eAED=0.43;_QI=0|0.75|0.6|1|1|1|5|0|361 |
| chr7_2 | exon | 20326390 | 20326656 | 20326390 | ID=Msa1052140-mRNA-1:exon:4540;Parent=Msa1052140-mRNA-1 |
| chr7_2 | exon | 20326100 | 20326297 | 20326100 | ID=Msa1052140-mRNA-1:exon:4539;Parent=Msa1052140-mRNA-1 |
| chr7_2 | exon | 20325736 | 20325908 | 20325736 | ID=Msa1052140-mRNA-1:exon:4538;Parent=Msa1052140-mRNA-1 |
| chr7_2 | exon | 20325367 | 20325469 | 20325367 | ID=Msa1052140-mRNA-1:exon:4537;Parent=Msa1052140-mRNA-1 |
| chr7_2 | exon | 20324306 | 20324650 | 20324306 | ID=Msa1052140-mRNA-1:exon:4536;Parent=Msa1052140-mRNA-1 |
| chr7_2 | CDS | 20326390 | 20326656 | 20326390 | ID=Msa1052140-mRNA-1:cds;Parent=Msa1052140-mRNA-1 |
| chr7_2 | CDS | 20326100 | 20326297 | 20326100 | ID=Msa1052140-mRNA-1:cds;Parent=Msa1052140-mRNA-1 |
| chr7_2 | CDS | 20325736 | 20325908 | 20325736 | ID=Msa1052140-mRNA-1:cds;Parent=Msa1052140-mRNA-1 |
| chr7_2 | CDS | 20325367 | 20325469 | 20325367 | ID=Msa1052140-mRNA-1:cds;Parent=Msa1052140-mRNA-1 |
| chr7_2 | CDS | 20324306 | 20324650 | 20324306 | ID=Msa1052140-mRNA-1:cds;Parent=Msa1052140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
