Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464420 | XP_013460839.1 | 98.938 | 659 | 7 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464420 | sp|Q9FEP7|SUT13_ARATH | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464420 | A0A072V0K2 | 98.938 | 659 | 7 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1333 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102130 | Msa0464420 | 0.808221 | 3.445186e-50 | -8.615850e-47 |
| Msa0191630 | Msa0464420 | 0.831935 | 1.258763e-55 | -8.615850e-47 |
| Msa0223290 | Msa0464420 | 0.801873 | 7.330976e-49 | -8.615850e-47 |
| Msa0223380 | Msa0464420 | 0.837445 | 5.177425e-57 | -8.615850e-47 |
| Msa0225470 | Msa0464420 | 0.807354 | 5.266031e-50 | -8.615850e-47 |
| Msa0233610 | Msa0464420 | 0.810544 | 1.093508e-50 | -8.615850e-47 |
| Msa0365490 | Msa0464420 | 0.810466 | 1.136664e-50 | -8.615850e-47 |
| Msa0370430 | Msa0464420 | 0.946185 | 7.472276e-105 | -8.615850e-47 |
| Msa0379550 | Msa0464420 | 0.827627 | 1.408940e-54 | -8.615850e-47 |
| Msa0389810 | Msa0464420 | 0.829745 | 4.334053e-55 | -8.615850e-47 |
| Msa0404220 | Msa0464420 | 0.811467 | 6.899738e-51 | -8.615850e-47 |
| Msa0404230 | Msa0464420 | 0.858536 | 7.703512e-63 | -8.615850e-47 |
| Msa0404700 | Msa0464420 | 0.808028 | 3.786908e-50 | -8.615850e-47 |
| Msa0417920 | Msa0464420 | 0.851432 | 8.911171e-61 | -8.615850e-47 |
| Msa0464420 | Msa0464900 | 0.827239 | 1.745760e-54 | -8.615850e-47 |
| Msa0464420 | Msa0468130 | 0.833537 | 5.039124e-56 | -8.615850e-47 |
| Msa0464420 | Msa0475410 | 0.838922 | 2.155762e-57 | -8.615850e-47 |
| Msa0464420 | Msa0491520 | 0.807054 | 6.096705e-50 | -8.615850e-47 |
| Msa0464420 | Msa0510040 | 0.971215 | 8.162139e-133 | -8.615850e-47 |
| Msa0464420 | Msa0581920 | 0.804122 | 2.513644e-49 | -8.615850e-47 |
| Msa0464420 | Msa0615340 | 0.809230 | 2.097189e-50 | -8.615850e-47 |
| Msa0464420 | Msa0622340 | 0.808954 | 2.402807e-50 | -8.615850e-47 |
| Msa0464420 | Msa0688670 | 0.806453 | 8.165150e-50 | -8.615850e-47 |
| Msa0464420 | Msa0694250 | 0.804574 | 2.023788e-49 | -8.615850e-47 |
| Msa0464420 | Msa0714960 | 0.802566 | 5.278817e-49 | -8.615850e-47 |
| Msa0464420 | Msa0715110 | 0.807306 | 5.390940e-50 | -8.615850e-47 |
| Msa0464420 | Msa0724560 | 0.802310 | 5.962367e-49 | -8.615850e-47 |
| Msa0464420 | Msa0724950 | 0.803573 | 3.268679e-49 | -8.615850e-47 |
| Msa0464420 | Msa0731180 | 0.812705 | 3.706330e-51 | -8.615850e-47 |
| Msa0464420 | Msa0757050 | 0.826359 | 2.833414e-54 | -8.615850e-47 |
| Msa0464420 | Msa0798030 | 0.807622 | 4.620892e-50 | -8.615850e-47 |
| Msa0464420 | Msa0798060 | 0.803177 | 3.948868e-49 | -8.615850e-47 |
| Msa0464420 | Msa0827470 | 0.801295 | 9.630057e-49 | -8.615850e-47 |
| Msa0464420 | Msa0908170 | 0.824857 | 6.429493e-54 | -8.615850e-47 |
| Msa0464420 | Msa0944730 | 0.801053 | 1.079678e-48 | -8.615850e-47 |
| Msa0464420 | Msa0982270 | 0.826232 | 3.037149e-54 | -8.615850e-47 |
| Msa0464420 | Msa0982590 | 0.812731 | 3.658032e-51 | -8.615850e-47 |
| Msa0464420 | Msa1052140 | 0.812964 | 3.252477e-51 | -8.615850e-47 |
| Msa0464420 | Msa1092090 | 0.812514 | 4.079785e-51 | -8.615850e-47 |
| Msa0464420 | Msa1174310 | 0.806999 | 6.261034e-50 | -8.615850e-47 |
| Msa0464420 | Msa1182640 | 0.803617 | 3.200580e-49 | -8.615850e-47 |
| Msa0464420 | Msa1218650 | 0.808625 | 2.825756e-50 | -8.615850e-47 |
| Msa0464420 | Msa1229850 | 0.803720 | 3.047391e-49 | -8.615850e-47 |
| Msa0464420 | Msa1230830 | 0.801834 | 7.467580e-49 | -8.615850e-47 |
| Msa0464420 | Msa1233500 | 0.811864 | 5.655253e-51 | -8.615850e-47 |
| Msa0464420 | Msa1235400 | 0.800106 | 1.684178e-48 | -8.615850e-47 |
| Msa0464420 | Msa1246660 | 0.809116 | 2.218448e-50 | -8.615850e-47 |
| Msa0464420 | Msa1272520 | 0.807314 | 5.370925e-50 | -8.615850e-47 |
| Msa0464420 | Msa1287650 | 0.801085 | 1.063577e-48 | -8.615850e-47 |
| Msa0464420 | Msa1287680 | 0.801331 | 9.470036e-49 | -8.615850e-47 |
| Msa0464420 | Msa1306750 | 0.805564 | 1.256059e-49 | -8.615850e-47 |
| Msa0464420 | Msa1307740 | 0.834509 | 2.877355e-56 | -8.615850e-47 |
| Msa0464420 | Msa1314770 | 0.818210 | 2.207301e-52 | -8.615850e-47 |
| Msa0464420 | Msa1419110 | 0.808466 | 3.055025e-50 | -8.615850e-47 |
| Msa0464420 | Msa1439230 | 0.804887 | 1.740846e-49 | -8.615850e-47 |
| Msa0271580 | Msa0464420 | 0.807152 | 5.813033e-50 | -8.615850e-47 |
| Msa0288320 | Msa0464420 | 0.808490 | 3.019311e-50 | -8.615850e-47 |
| Msa0363100 | Msa0464420 | 0.800818 | 1.205955e-48 | -8.615850e-47 |
| Msa0363170 | Msa0464420 | 0.824898 | 6.288505e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464420 | MtrunA17_Chr3g0115481 | 98.938 | 659 | 7 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1333 |
| Msa0464420 | MtrunA17_Chr5g0425251 | 84.018 | 657 | 102 | 2 | 4 | 659 | 1 | 655 | 0.0 | 1136 |
| Msa0464420 | MtrunA17_Chr2g0278931 | 70.128 | 626 | 183 | 3 | 30 | 654 | 32 | 654 | 0.0 | 901 |
| Msa0464420 | MtrunA17_Chr1g0185231 | 53.096 | 646 | 291 | 4 | 23 | 659 | 3 | 645 | 0.0 | 696 |
| Msa0464420 | MtrunA17_Chr7g0260181 | 52.335 | 621 | 292 | 3 | 33 | 652 | 18 | 635 | 0.0 | 694 |
| Msa0464420 | MtrunA17_Chr2g0331951 | 53.344 | 628 | 289 | 3 | 33 | 659 | 23 | 647 | 0.0 | 694 |
| Msa0464420 | MtrunA17_Chr4g0043931 | 51.411 | 638 | 304 | 5 | 17 | 652 | 1 | 634 | 0.0 | 683 |
| Msa0464420 | MtrunA17_Chr3g0124381 | 53.704 | 648 | 278 | 9 | 11 | 651 | 17 | 649 | 0.0 | 679 |
| Msa0464420 | MtrunA17_Chr5g0425241 | 54.327 | 624 | 269 | 6 | 38 | 651 | 29 | 646 | 0.0 | 678 |
| Msa0464420 | MtrunA17_Chr4g0004261 | 51.823 | 631 | 294 | 4 | 33 | 659 | 30 | 654 | 0.0 | 675 |
| Msa0464420 | MtrunA17_Chr3g0115461 | 51.314 | 647 | 290 | 5 | 13 | 651 | 23 | 652 | 0.0 | 664 |
| Msa0464420 | MtrunA17_Chr4g0043951 | 51.537 | 553 | 261 | 3 | 9 | 561 | 2 | 547 | 0.0 | 591 |
| Msa0464420 | MtrunA17_Chr6g0485191 | 43.680 | 625 | 345 | 4 | 28 | 651 | 58 | 676 | 0.0 | 573 |
| Msa0464420 | MtrunA17_Chr3g0124371 | 41.014 | 651 | 356 | 9 | 9 | 648 | 16 | 649 | 1.46e-173 | 510 |
| Msa0464420 | MtrunA17_Chr7g0222631 | 39.446 | 578 | 336 | 7 | 77 | 651 | 70 | 636 | 1.29e-137 | 419 |
| Msa0464420 | MtrunA17_Chr1g0173031 | 51.818 | 220 | 101 | 2 | 33 | 252 | 30 | 244 | 2.20e-68 | 227 |
| Msa0464420 | MtrunA17_Chr1g0173031 | 56.250 | 96 | 42 | 0 | 319 | 414 | 250 | 345 | 1.52e-31 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464420 | AT1G22150.1 | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| Msa0464420 | AT1G22150.3 | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| Msa0464420 | AT1G22150.4 | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| Msa0464420 | AT1G78000.2 | 77.352 | 627 | 139 | 2 | 30 | 655 | 25 | 649 | 0.0 | 947 |
| Msa0464420 | AT1G78000.1 | 77.352 | 627 | 139 | 2 | 30 | 655 | 25 | 649 | 0.0 | 947 |
| Msa0464420 | AT1G78000.3 | 77.352 | 627 | 139 | 2 | 30 | 655 | 25 | 649 | 0.0 | 947 |
| Msa0464420 | AT4G08620.1 | 71.589 | 623 | 174 | 2 | 34 | 655 | 24 | 644 | 0.0 | 910 |
| Msa0464420 | AT1G78000.5 | 78.462 | 585 | 123 | 2 | 30 | 613 | 25 | 607 | 0.0 | 892 |
| Msa0464420 | AT1G22150.2 | 77.002 | 587 | 130 | 4 | 1 | 586 | 1 | 583 | 0.0 | 884 |
| Msa0464420 | AT1G78000.4 | 78.853 | 558 | 115 | 2 | 30 | 586 | 25 | 580 | 0.0 | 848 |
| Msa0464420 | AT1G78000.6 | 78.481 | 474 | 100 | 1 | 29 | 502 | 24 | 495 | 0.0 | 712 |
| Msa0464420 | AT3G51895.2 | 53.215 | 622 | 286 | 4 | 33 | 652 | 65 | 683 | 0.0 | 704 |
| Msa0464420 | AT3G51895.1 | 53.215 | 622 | 286 | 4 | 33 | 652 | 20 | 638 | 0.0 | 702 |
| Msa0464420 | AT3G15990.1 | 51.675 | 627 | 299 | 3 | 33 | 658 | 27 | 650 | 0.0 | 687 |
| Msa0464420 | AT1G78000.7 | 80.984 | 447 | 82 | 2 | 141 | 586 | 1 | 445 | 0.0 | 673 |
| Msa0464420 | AT5G10180.1 | 53.333 | 630 | 284 | 6 | 27 | 651 | 48 | 672 | 0.0 | 660 |
| Msa0464420 | AT1G23090.1 | 50.641 | 624 | 303 | 4 | 33 | 654 | 4 | 624 | 0.0 | 657 |
| Msa0464420 | AT4G02700.1 | 49.114 | 621 | 311 | 4 | 33 | 651 | 10 | 627 | 0.0 | 627 |
| Msa0464420 | AT1G77990.1 | 48.476 | 656 | 323 | 6 | 6 | 648 | 10 | 663 | 0.0 | 620 |
| Msa0464420 | AT5G19600.1 | 42.543 | 637 | 347 | 7 | 19 | 651 | 2 | 623 | 0.0 | 537 |
| Msa0464420 | AT1G23090.2 | 49.899 | 495 | 243 | 4 | 162 | 654 | 1 | 492 | 4.06e-174 | 506 |
| Msa0464420 | AT1G23090.3 | 49.899 | 495 | 243 | 4 | 162 | 654 | 1 | 492 | 4.06e-174 | 506 |
| Msa0464420 | AT1G23090.4 | 49.899 | 495 | 243 | 4 | 162 | 654 | 1 | 492 | 4.06e-174 | 506 |
| Msa0464420 | AT3G12520.2 | 38.581 | 578 | 341 | 7 | 77 | 651 | 47 | 613 | 1.29e-132 | 405 |
| Msa0464420 | AT3G12520.1 | 38.581 | 578 | 341 | 7 | 77 | 651 | 63 | 629 | 1.73e-132 | 405 |
| Msa0464420 | AT5G13550.1 | 37.688 | 597 | 358 | 7 | 58 | 651 | 57 | 642 | 1.93e-129 | 397 |
| Msa0464420 | AT3G12520.3 | 39.463 | 484 | 281 | 6 | 77 | 559 | 63 | 535 | 4.40e-112 | 348 |
Find 153 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCCAAGAACTGCTATTT+TGG | 0.159336 | 3_3:+64401958 | Msa0464420:CDS |
| CAAACTTTACACATCAAATT+TGG | 0.194351 | 3_3:+64402642 | Msa0464420:CDS |
| TTGTAACATTGTATTAATTA+AGG | 0.198375 | 3_3:+64403124 | Msa0464420:three_prime_UTR |
| TTAATGTCATACAATAAATT+TGG | 0.204828 | 3_3:-64400402 | None:intergenic |
| GTGTTGGCAATTCTTGTTAA+AGG | 0.231722 | 3_3:+64403253 | Msa0464420:three_prime_UTR |
| GCTTGCATGGGAGCATTCTT+TGG | 0.233187 | 3_3:+64401502 | Msa0464420:CDS |
| TCAAATTTGGCTAACATAAT+TGG | 0.235564 | 3_3:+64402655 | Msa0464420:CDS |
| TCATATTCCCTATACTTAAC+TGG | 0.244415 | 3_3:+64399313 | Msa0464420:CDS |
| CTTGCATGGGAGCATTCTTT+GGG | 0.248132 | 3_3:+64401503 | Msa0464420:CDS |
| CAAGAATTGCCAACACTAAA+TGG | 0.257169 | 3_3:-64403246 | None:intergenic |
| GGCAGTGGTTTCTCTCTTGT+TGG | 0.266819 | 3_3:+64399717 | Msa0464420:CDS |
| CTTGTTTGAGCAGCTTGTTC+TGG | 0.272068 | 3_3:+64402594 | Msa0464420:intron |
| TATCCCTCTCATTTCATTAG+AGG | 0.280277 | 3_3:+64403177 | Msa0464420:three_prime_UTR |
| TTCCCCAAAATAGCAGTTCT+TGG | 0.283487 | 3_3:-64401962 | None:intergenic |
| ATTCAGTTAGGAGAGAAAAT+TGG | 0.283827 | 3_3:+64402754 | Msa0464420:three_prime_UTR |
| AAAATAAATGTTAGGATATA+AGG | 0.284791 | 3_3:-64398737 | None:intergenic |
| TCCTTGAATAAGTTCTGTTT+TGG | 0.295462 | 3_3:-64399192 | None:intergenic |
| CTCTATGTAGGATCTACTTT+TGG | 0.298269 | 3_3:+64398571 | Msa0464420:five_prime_UTR |
| AACTTCTTTCCTGCTCAATA+AGG | 0.300421 | 3_3:+64398481 | None:intergenic |
| ACCACTTATTTATGCTTTCA+TGG | 0.312166 | 3_3:+64399663 | Msa0464420:CDS |
| TATTCTTCTGCATGCGTAAC+AGG | 0.316301 | 3_3:-64399766 | None:intergenic |
| CCCTTTCAGGTTCTTTCTCT+CGG | 0.326604 | 3_3:+64401269 | Msa0464420:intron |
| CATCAGTCTTGTGGACTATC+AGG | 0.327508 | 3_3:+64401438 | Msa0464420:CDS |
| TTGGCCTTGTCACTTGTAAT+AGG | 0.331619 | 3_3:-64401943 | None:intergenic |
| CTATCCCATGCTGCTATTGT+CGG | 0.334142 | 3_3:+64400010 | Msa0464420:CDS |
| ACCATTCAAATCTTCTGTTC+AGG | 0.339033 | 3_3:+64398524 | Msa0464420:five_prime_UTR |
| ATACTCTAAGCTTGCACATT+TGG | 0.342714 | 3_3:+64399513 | Msa0464420:CDS |
| TACTAGCTTCTGTGTATTGT+TGG | 0.347401 | 3_3:-64402015 | None:intergenic |
| CATGGGTTCACATCTAGCTT+TGG | 0.355433 | 3_3:-64402727 | None:intergenic |
| GATATCAATGGGGCAATTGC+TGG | 0.356023 | 3_3:-64400539 | None:intergenic |
| GTACCTTTCTTTAACATAGT+TGG | 0.358549 | 3_3:-64402092 | None:intergenic |
| AGAAGAACAAGAAATTCTTC+TGG | 0.361674 | 3_3:+64400513 | Msa0464420:CDS |
| GTCCTCCTCGTTTATATAGT+TGG | 0.372121 | 3_3:-64398762 | None:intergenic |
| ATGAAGGATTATCAATTAGA+TGG | 0.377902 | 3_3:+64400982 | Msa0464420:CDS |
| TGGTCTTTGAAAGATCTTAG+AGG | 0.380869 | 3_3:-64399255 | None:intergenic |
| GCACATTTGGCACCACAGTA+TGG | 0.381293 | 3_3:+64399526 | Msa0464420:CDS |
| AATTTCCCCACCTTAGGATA+AGG | 0.382315 | 3_3:-64402949 | None:intergenic |
| GCACCCGTGTTAGCTTTCTA+TGG | 0.382400 | 3_3:-64403079 | None:intergenic |
| TGTTGGCAATTCTTGTTAAA+GGG | 0.387637 | 3_3:+64403254 | Msa0464420:three_prime_UTR |
| GCAGTGGTTTCTCTCTTGTT+GGG | 0.391026 | 3_3:+64399718 | Msa0464420:CDS |
| ATTGCAACTTTGTAAGCATA+TGG | 0.407177 | 3_3:-64399165 | None:intergenic |
| CAGCTTGTTCTGGCAAATCC+TGG | 0.413117 | 3_3:+64402604 | Msa0464420:intron |
| TTCTGCTGTCATCAGTCTTG+TGG | 0.413682 | 3_3:+64401429 | Msa0464420:CDS |
| TCCAAAACAGAACTTATTCA+AGG | 0.417587 | 3_3:+64399191 | Msa0464420:CDS |
| TGATATTATCTCCGTGTTGA+AGG | 0.418696 | 3_3:+64400120 | Msa0464420:CDS |
| AACTGGCAAACTATATTAAT+CGG | 0.422167 | 3_3:+64400350 | Msa0464420:CDS |
| TTTAAAATTGGCGTCATGGC+AGG | 0.425028 | 3_3:+64400816 | Msa0464420:CDS |
| CACCTTAGGATAAGGATCTC+TGG | 0.425887 | 3_3:-64402941 | None:intergenic |
| ACAGAAGCTAGTAAGGTTCC+AGG | 0.431458 | 3_3:+64402025 | Msa0464420:CDS |
| GAGATAGCATACTCCATGTT+TGG | 0.433528 | 3_3:-64400158 | None:intergenic |
| AGTTGGATAAAATAAATGTT+AGG | 0.436621 | 3_3:-64398745 | None:intergenic |
| TTCTATGACTTCTTGTTATG+TGG | 0.437463 | 3_3:+64401047 | Msa0464420:CDS |
| TAAATTTCATGAACAGATGA+AGG | 0.439342 | 3_3:-64400765 | None:intergenic |
| ACAATACAACTGATATCAAT+GGG | 0.439415 | 3_3:-64400550 | None:intergenic |
| CAACAGCTAAAGGGTTTCCT+TGG | 0.439994 | 3_3:+64400067 | Msa0464420:CDS |
| GGGATTACACAAGCAACTCT+TGG | 0.440824 | 3_3:+64399823 | Msa0464420:CDS |
| TAATTTAATTTCCCCACCTT+AGG | 0.441735 | 3_3:-64402955 | None:intergenic |
| AATTGCCCTTCAACAGCTAA+AGG | 0.441884 | 3_3:+64400057 | Msa0464420:CDS |
| CTAACAAAAGTTAGTAGAAA+GGG | 0.442917 | 3_3:+64402902 | Msa0464420:three_prime_UTR |
| GAAGAACAAGAAATTCTTCT+GGG | 0.444848 | 3_3:+64400514 | Msa0464420:CDS |
| AAGAACATTTGCATCTATGA+AGG | 0.450445 | 3_3:+64400966 | Msa0464420:CDS |
| GGAAACCCTTTAGCTGTTGA+AGG | 0.451418 | 3_3:-64400063 | None:intergenic |
| CCTATATAATAACAGATTGA+AGG | 0.451524 | 3_3:+64399046 | Msa0464420:intron |
| TTCTTTAACATAGTTGGAGT+TGG | 0.452253 | 3_3:-64402086 | None:intergenic |
| AATGATGATGGCGGCGAGAA+TGG | 0.456380 | 3_3:-64401407 | None:intergenic |
| TTTGGCTAACATAATTGGTC+AGG | 0.456815 | 3_3:+64402660 | Msa0464420:CDS |
| ATTGCCCTTCAACAGCTAAA+GGG | 0.458365 | 3_3:+64400058 | Msa0464420:CDS |
| TGCAAGTCTTTGCATACCTC+AGG | 0.461632 | 3_3:+64399392 | Msa0464420:CDS |
| TTATTGTGTGTGTGCACAAC+TGG | 0.463736 | 3_3:-64403015 | None:intergenic |
| AAGGTAAATCACATAGAGAA+AGG | 0.464306 | 3_3:+64400735 | Msa0464420:intron |
| ATGGCGGCGAGAATGGCATT+TGG | 0.465915 | 3_3:-64401400 | None:intergenic |
| ACAATACACAGAAGCTAGTA+AGG | 0.466966 | 3_3:+64402018 | Msa0464420:CDS |
| ACTTCTTGTTATGTGGCAAC+TGG | 0.469483 | 3_3:+64401054 | Msa0464420:CDS |
| AGTTCTCGCGATATAGCAAT+AGG | 0.473447 | 3_3:+64399688 | Msa0464420:CDS |
| TTTCTTGCAGAATATTAAGA+TGG | 0.474803 | 3_3:+64402188 | Msa0464420:intron |
| CGACAATAGCAGCATGGGAT+AGG | 0.479296 | 3_3:-64400009 | None:intergenic |
| CAATATTAGAGACTGCAGTT+TGG | 0.479467 | 3_3:-64401318 | None:intergenic |
| TTAAACAAAATTCTCTATGT+AGG | 0.482696 | 3_3:+64398559 | Msa0464420:five_prime_UTR |
| ACTAACAAAAGTTAGTAGAA+AGG | 0.488351 | 3_3:+64402901 | Msa0464420:three_prime_UTR |
| GGATTACACAAGCAACTCTT+GGG | 0.490943 | 3_3:+64399824 | Msa0464420:CDS |
| ATTAGATGGAAACAGAGAAA+TGG | 0.491879 | 3_3:+64400996 | Msa0464420:CDS |
| CATATTCCCTATACTTAACT+GGG | 0.493178 | 3_3:+64399314 | Msa0464420:CDS |
| TTGTCTGTATCTTTATCAGT+TGG | 0.493507 | 3_3:-64399096 | None:intergenic |
| TTATCAGTTGGAGAATCCAT+TGG | 0.494298 | 3_3:-64399084 | None:intergenic |
| GACAATACAACTGATATCAA+TGG | 0.494922 | 3_3:-64400551 | None:intergenic |
| TTGTCTGTCACTGCTGAACC+AGG | 0.503392 | 3_3:-64402622 | None:intergenic |
| CCACTTATTTATGCTTTCAT+GGG | 0.515118 | 3_3:+64399664 | Msa0464420:CDS |
| GTCAAATATTTGATCAGTGT+CGG | 0.515881 | 3_3:+64398669 | Msa0464420:five_prime_UTR |
| CTCCAGAGATCCTTATCCTA+AGG | 0.518703 | 3_3:+64402939 | Msa0464420:three_prime_UTR |
| TCAGCAATGCCTTATTGAGC+AGG | 0.524947 | 3_3:-64398490 | None:intergenic |
| CAGAGATCCTTATCCTAAGG+TGG | 0.526449 | 3_3:+64402942 | Msa0464420:three_prime_UTR |
| CAGAAGATTTGAATGGTCAC+TGG | 0.526466 | 3_3:-64398518 | None:intergenic |
| TAGATGATAGCAAAGTCAAA+AGG | 0.527351 | 3_3:+64402830 | Msa0464420:three_prime_UTR |
| AAATGTTCTTCCAATAGCTA+TGG | 0.529144 | 3_3:-64400953 | None:intergenic |
| ACTCCAACTATGTTAAAGAA+AGG | 0.531555 | 3_3:+64402089 | Msa0464420:CDS |
| GGCAGGCATGATTGCACTGA+CGG | 0.532067 | 3_3:+64400833 | Msa0464420:CDS |
| AACATTGTATTAATTAAGGA+TGG | 0.532108 | 3_3:+64403128 | Msa0464420:three_prime_UTR |
| AACAGAGAAATGGTAGCGTT+AGG | 0.534101 | 3_3:+64401006 | Msa0464420:CDS |
| TATGTAACTCTTCAAAGGCA+TGG | 0.541754 | 3_3:-64402404 | None:intergenic |
| AAGAGAGAAACCACTGCCAC+TGG | 0.543890 | 3_3:-64399712 | None:intergenic |
| AGCAATAGGACCAGTGGCAG+TGG | 0.545673 | 3_3:+64399702 | Msa0464420:CDS |
| TTTAGGGGAGATATAATAGC+TGG | 0.546068 | 3_3:+64399360 | Msa0464420:CDS |
| TTCAGGTTCTTTCTCTCGGT+CGG | 0.546094 | 3_3:+64401273 | Msa0464420:intron |
| CCCATGAAAGCATAAATAAG+TGG | 0.547324 | 3_3:-64399664 | None:intergenic |
| AGGTTCTTTCTCTCGGTCGG+CGG | 0.551736 | 3_3:+64401276 | Msa0464420:intron |
| TCGGCGGTAAATTACATGGC+TGG | 0.554084 | 3_3:+64401292 | Msa0464420:CDS |
| CAGAATATTAAGATGGCTAA+CGG | 0.557714 | 3_3:+64402195 | Msa0464420:intron |
| AGGTAAATCACATAGAGAAA+GGG | 0.560126 | 3_3:+64400736 | Msa0464420:intron |
| GTCACTGTTGATGTCTCCAA+TGG | 0.566938 | 3_3:+64399068 | Msa0464420:exon |
| AGCGGCGATTACCTTGGGAA+AGG | 0.569473 | 3_3:+64400792 | Msa0464420:CDS |
| TTAGGAACAATGAATGTCGT+TGG | 0.571428 | 3_3:+64401024 | Msa0464420:CDS |
| TGAAATAGACAGTGGCATAG+TGG | 0.572191 | 3_3:+64402790 | Msa0464420:three_prime_UTR |
| AAAACCTCTAATGAAATGAG+AGG | 0.573289 | 3_3:-64403181 | None:intergenic |
| GAAACCCTTTAGCTGTTGAA+GGG | 0.577893 | 3_3:-64400062 | None:intergenic |
| ACCTGAACAGAAGATTTGAA+TGG | 0.578768 | 3_3:-64398525 | None:intergenic |
| AGAGATCCTTATCCTAAGGT+GGG | 0.580788 | 3_3:+64402943 | Msa0464420:three_prime_UTR |
| ACTTCTATGTAACTCTTCAA+AGG | 0.581904 | 3_3:-64402409 | None:intergenic |
| ATTATCAGAGATTTGAACAA+CGG | 0.583698 | 3_3:-64398817 | None:intergenic |
| CAATAAATTTGGCGACCAGA+AGG | 0.585111 | 3_3:-64400391 | None:intergenic |
| AAAACCGACAATAGCAGCAT+GGG | 0.585952 | 3_3:-64400014 | None:intergenic |
| GTATTCTCATCAGCCAAACA+TGG | 0.590091 | 3_3:+64400145 | Msa0464420:CDS |
| TTCTTAGAAGTAGAAACTCA+TGG | 0.597566 | 3_3:-64398784 | None:intergenic |
| ATGAAAGCATAAATAAGTGG+TGG | 0.604379 | 3_3:-64399661 | None:intergenic |
| GTTGGCAATTCTTGTTAAAG+GGG | 0.604893 | 3_3:+64403255 | Msa0464420:three_prime_UTR |
| TAACAAAAGTTAGTAGAAAG+GGG | 0.606993 | 3_3:+64402903 | Msa0464420:three_prime_UTR |
| ACTCTTACAATCATTACACC+TGG | 0.609301 | 3_3:-64402043 | None:intergenic |
| TCGGTCGGCGGTAAATTACA+TGG | 0.613139 | 3_3:+64401288 | Msa0464420:CDS |
| TTGGCAATTCTTGTTAAAGG+GGG | 0.617514 | 3_3:+64403256 | Msa0464420:three_prime_UTR |
| ACGGATGAAGAAGCAGTGAA+AGG | 0.618073 | 3_3:+64402214 | Msa0464420:CDS |
| GATGACAGCAGAAATGATGA+TGG | 0.627258 | 3_3:-64401419 | None:intergenic |
| ATACAAATACAAATACATGC+AGG | 0.627364 | 3_3:-64403101 | None:intergenic |
| TTTCTATAGACAGATGTCCC+AGG | 0.630261 | 3_3:-64401989 | None:intergenic |
| TAAAACCGACAATAGCAGCA+TGG | 0.633354 | 3_3:-64400015 | None:intergenic |
| AAACCTCTAATGAAATGAGA+GGG | 0.636257 | 3_3:-64403180 | None:intergenic |
| TTTCAAATATCTAAGTACGG+TGG | 0.638502 | 3_3:-64398609 | None:intergenic |
| TTGCATGGGAGCATTCTTTG+GGG | 0.638724 | 3_3:+64401504 | Msa0464420:CDS |
| CGATATAGCAATAGGACCAG+TGG | 0.642615 | 3_3:+64399696 | Msa0464420:CDS |
| TATTCCCTATACTTAACTGG+GGG | 0.663981 | 3_3:+64399316 | Msa0464420:CDS |
| ATAACACGCGCAGATAAACA+AGG | 0.670320 | 3_3:+64400590 | Msa0464420:CDS |
| TAGTCCATAGAAAGCTAACA+CGG | 0.678351 | 3_3:+64403075 | Msa0464420:three_prime_UTR |
| ATATTCCCTATACTTAACTG+GGG | 0.678687 | 3_3:+64399315 | Msa0464420:CDS |
| GAGATCCTTATCCTAAGGTG+GGG | 0.679536 | 3_3:+64402944 | Msa0464420:three_prime_UTR |
| TGAGAATACTGCCTTCAACA+CGG | 0.684095 | 3_3:-64400131 | None:intergenic |
| AGATCCTATTACAAGTGACA+AGG | 0.684935 | 3_3:+64401939 | Msa0464420:CDS |
| ATCCAACTATATAAACGAGG+AGG | 0.685545 | 3_3:+64398760 | Msa0464420:five_prime_UTR |
| CAACAGCTGCTGCAACAGTG+AGG | 0.697666 | 3_3:-64402693 | None:intergenic |
| TTTATCCAACTATATAAACG+AGG | 0.702213 | 3_3:+64398757 | Msa0464420:five_prime_UTR |
| GTCTTACATAGTCCATACTG+TGG | 0.710058 | 3_3:-64399538 | None:intergenic |
| GACAGCAGAAATGATGATGG+CGG | 0.713860 | 3_3:-64401416 | None:intergenic |
| AGTCCATAGAAAGCTAACAC+GGG | 0.719408 | 3_3:+64403076 | Msa0464420:three_prime_UTR |
| CAATACAACTGATATCAATG+GGG | 0.724749 | 3_3:-64400549 | None:intergenic |
| GTTACTGACATCGATACGAG+TGG | 0.726960 | 3_3:+64402378 | Msa0464420:CDS |
| GAGAATGATGAAATAGACAG+TGG | 0.786716 | 3_3:+64402782 | Msa0464420:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTGTAATTTAATGTTA+CGG | + | chr3_3:64398988-64399007 | Msa0464420:intron | 10.0% |
| !! | TTACAATCTTAAAAAATTTA+GGG | + | chr3_3:64399344-64399363 | Msa0464420:CDS | 10.0% |
| !!! | TTATTATATCTGAAATATTT+AGG | + | chr3_3:64400443-64400462 | Msa0464420:intron | 10.0% |
| !! | AAAATAAATGTTAGGATATA+AGG | - | chr3_3:64398740-64398759 | None:intergenic | 15.0% |
| !! | GTTACAATCTTAAAAAATTT+AGG | + | chr3_3:64399343-64399362 | Msa0464420:CDS | 15.0% |
| !! | TACAATCTTAAAAAATTTAG+GGG | + | chr3_3:64399345-64399364 | Msa0464420:CDS | 15.0% |
| !! | AACACTTATAAAAAAAATCT+TGG | - | chr3_3:64399578-64399597 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTATAAGTGTTT+TGG | + | chr3_3:64399579-64399598 | Msa0464420:intron | 15.0% |
| !! | TTAATGTCATACAATAAATT+TGG | - | chr3_3:64400405-64400424 | None:intergenic | 15.0% |
| !! | TATAATAATAAGATGAAGTA+GGG | - | chr3_3:64400431-64400450 | None:intergenic | 15.0% |
| !! | ATATAATAATAAGATGAAGT+AGG | - | chr3_3:64400432-64400451 | None:intergenic | 15.0% |
| !! | GATATAAATTATGATACTAT+AGG | + | chr3_3:64402529-64402548 | Msa0464420:intron | 15.0% |
| !! | TTGTAACATTGTATTAATTA+AGG | + | chr3_3:64403124-64403143 | Msa0464420:three_prime_UTR | 15.0% |
| !! | TTAAACAAAATTCTCTATGT+AGG | + | chr3_3:64398559-64398578 | Msa0464420:five_prime_UTR | 20.0% |
| !!! | GATTTTCAAATATCTAAGTA+CGG | - | chr3_3:64398615-64398634 | None:intergenic | 20.0% |
| !! | AAAACAAGGAAAAATGAATA+AGG | + | chr3_3:64398699-64398718 | Msa0464420:five_prime_UTR | 20.0% |
| !! | AGTTGGATAAAATAAATGTT+AGG | - | chr3_3:64398748-64398767 | None:intergenic | 20.0% |
| !! | TAAAATATAGGCAATTTCTA+TGG | - | chr3_3:64398860-64398879 | None:intergenic | 20.0% |
| !!! | GTAGATTGATGATAAAATAT+AGG | - | chr3_3:64398872-64398891 | None:intergenic | 20.0% |
| !! | CTTCAATCTGTTATTATATA+GGG | - | chr3_3:64399048-64399067 | None:intergenic | 20.0% |
| !! | ATATTTGATGTTCTTATACT+TGG | + | chr3_3:64399470-64399489 | Msa0464420:intron | 20.0% |
| !!! | TTATACTTGGTTTGAAAAAT+AGG | + | chr3_3:64399483-64399502 | Msa0464420:intron | 20.0% |
| !!! | ACATTTTAGTTTTAATTCCA+AGG | - | chr3_3:64400087-64400106 | None:intergenic | 20.0% |
| !!! | TGGTAGGAAATTTTAATATT+AGG | - | chr3_3:64400270-64400289 | None:intergenic | 20.0% |
| !!! | TAATATTTAACATTTTGCAG+TGG | + | chr3_3:64400327-64400346 | Msa0464420:intron | 20.0% |
| !! | TGTTATGAATACAAAAAAAG+TGG | - | chr3_3:64400576-64400595 | None:intergenic | 20.0% |
| !!! | GTTCATGAAATTTATTTTAG+CGG | + | chr3_3:64400774-64400793 | Msa0464420:CDS | 20.0% |
| !!! | CTAATTAAACTATTGCATTT+TGG | + | chr3_3:64400919-64400938 | Msa0464420:intron | 20.0% |
| !!! | TTCATACATCTACAATTTTA+TGG | + | chr3_3:64401164-64401183 | Msa0464420:intron | 20.0% |
| !! | TTGTTTCAATGTATAAACAA+AGG | - | chr3_3:64402131-64402150 | None:intergenic | 20.0% |
| !! | ATATGTCAAAGAAAAATCTA+GGG | - | chr3_3:64403054-64403073 | None:intergenic | 20.0% |
| !! | AATATGTCAAAGAAAAATCT+AGG | - | chr3_3:64403055-64403074 | None:intergenic | 20.0% |
| !! | AACATTGTATTAATTAAGGA+TGG | + | chr3_3:64403128-64403147 | Msa0464420:three_prime_UTR | 20.0% |
| ! | TTTATCCAACTATATAAACG+AGG | + | chr3_3:64398757-64398776 | Msa0464420:five_prime_UTR | 25.0% |
| ! | ATTATCAGAGATTTGAACAA+CGG | - | chr3_3:64398820-64398839 | None:intergenic | 25.0% |
| ! | ATTTATGAACTATCTAGTTG+AGG | + | chr3_3:64398917-64398936 | Msa0464420:intron | 25.0% |
| ! | CCTTCAATCTGTTATTATAT+AGG | - | chr3_3:64399049-64399068 | None:intergenic | 25.0% |
| ! | CCTATATAATAACAGATTGA+AGG | + | chr3_3:64399046-64399065 | Msa0464420:intron | 25.0% |
| !! | ATGTTTCTTTTACAGTGTAT+TGG | - | chr3_3:64399221-64399240 | None:intergenic | 25.0% |
| !!! | TCAACTTTTTTGATGTACTT+TGG | - | chr3_3:64399278-64399297 | None:intergenic | 25.0% |
| !!! | ACATCAAAAAAGTTGATACT+TGG | + | chr3_3:64399282-64399301 | Msa0464420:CDS | 25.0% |
| ! | TGGTTTGAAAAATAGGATAT+TGG | + | chr3_3:64399490-64399509 | Msa0464420:intron | 25.0% |
| ! | TGATGATCTTATAACTGAAT+CGG | + | chr3_3:64399938-64399957 | Msa0464420:intron | 25.0% |
| !!! | GGAAATTTTAATATTAGGCA+GGG | - | chr3_3:64400265-64400284 | None:intergenic | 25.0% |
| !!! | AGGAAATTTTAATATTAGGC+AGG | - | chr3_3:64400266-64400285 | None:intergenic | 25.0% |
| ! | AACTGGCAAACTATATTAAT+CGG | + | chr3_3:64400350-64400369 | Msa0464420:CDS | 25.0% |
| !!! | TATTTCATGTTGTGTTGATT+AGG | + | chr3_3:64400487-64400506 | Msa0464420:intron | 25.0% |
| !!! | ATTTCATGTTGTGTTGATTA+GGG | + | chr3_3:64400488-64400507 | Msa0464420:intron | 25.0% |
| ! | ACAATACAACTGATATCAAT+GGG | - | chr3_3:64400553-64400572 | None:intergenic | 25.0% |
| ! | AGTATTAATCAGAATGTGAA+TGG | - | chr3_3:64400645-64400664 | None:intergenic | 25.0% |
| ! | TAAATTTCATGAACAGATGA+AGG | - | chr3_3:64400768-64400787 | None:intergenic | 25.0% |
| ! | TAGAAAACTGTTGAAGTAAA+TGG | - | chr3_3:64400902-64400921 | None:intergenic | 25.0% |
| !!! | ACTATTGCATTTTGGTTTTT+AGG | + | chr3_3:64400927-64400946 | Msa0464420:intron | 25.0% |
| ! | ATGAAGGATTATCAATTAGA+TGG | + | chr3_3:64400982-64401001 | Msa0464420:CDS | 25.0% |
| !!! | CAGACAACAGTTTTTAATTT+CGG | + | chr3_3:64401116-64401135 | Msa0464420:intron | 25.0% |
| !! | TTTGGAGTGTATTTAAAAAG+AGG | - | chr3_3:64401385-64401404 | None:intergenic | 25.0% |
| ! | AGCATAGTATAACTAAGATT+TGG | - | chr3_3:64401575-64401594 | None:intergenic | 25.0% |
| ! | TTGTCAAAGTAATTCCTAAT+AGG | + | chr3_3:64401600-64401619 | Msa0464420:intron | 25.0% |
| ! | TGTCAAAGTAATTCCTAATA+GGG | + | chr3_3:64401601-64401620 | Msa0464420:intron | 25.0% |
| !! | CTAGTCTTTAAATTTAAGGT+TGG | - | chr3_3:64401654-64401673 | None:intergenic | 25.0% |
| ! | CAACCTTAAATTTAAAGACT+AGG | + | chr3_3:64401652-64401671 | Msa0464420:intron | 25.0% |
| !! | AGTCCTAGTCTTTAAATTTA+AGG | - | chr3_3:64401658-64401677 | None:intergenic | 25.0% |
| ! | ATAATAAAGTACATAGACTC+CGG | - | chr3_3:64401750-64401769 | None:intergenic | 25.0% |
| ! | ATATCACAGCAATTTAAACA+AGG | + | chr3_3:64401799-64401818 | Msa0464420:intron | 25.0% |
| ! | TTTCAATGTATAAACAAAGG+AGG | - | chr3_3:64402128-64402147 | None:intergenic | 25.0% |
| ! | TCTCAAGAAAAAGTTCAAAT+TGG | - | chr3_3:64402155-64402174 | None:intergenic | 25.0% |
| ! | TTTCTTGCAGAATATTAAGA+TGG | + | chr3_3:64402188-64402207 | Msa0464420:intron | 25.0% |
| ! | TCAAAAATTGAATTCTTGTG+TGG | - | chr3_3:64402246-64402265 | None:intergenic | 25.0% |
| ! | TATGAGGCTAAAACAAATTA+AGG | - | chr3_3:64402306-64402325 | None:intergenic | 25.0% |
| ! | AGTCTAAATCAAATTACTCA+AGG | - | chr3_3:64402331-64402350 | None:intergenic | 25.0% |
| ! | CAAACTTTACACATCAAATT+TGG | + | chr3_3:64402642-64402661 | Msa0464420:CDS | 25.0% |
| ! | TCAAATTTGGCTAACATAAT+TGG | + | chr3_3:64402655-64402674 | Msa0464420:CDS | 25.0% |
| ! | ACTAACAAAAGTTAGTAGAA+AGG | + | chr3_3:64402901-64402920 | Msa0464420:three_prime_UTR | 25.0% |
| ! | CTAACAAAAGTTAGTAGAAA+GGG | + | chr3_3:64402902-64402921 | Msa0464420:three_prime_UTR | 25.0% |
| ! | TAACAAAAGTTAGTAGAAAG+GGG | + | chr3_3:64402903-64402922 | Msa0464420:three_prime_UTR | 25.0% |
| ! | TATGTCAAAGAAAAATCTAG+GGG | - | chr3_3:64403053-64403072 | None:intergenic | 25.0% |
| ! | ATACAAATACAAATACATGC+AGG | - | chr3_3:64403104-64403123 | None:intergenic | 25.0% |
| !! | TCATTAGAGGTTTTCATAAA+AGG | + | chr3_3:64403190-64403209 | Msa0464420:three_prime_UTR | 25.0% |
| !!! | TTTTTTCTTCCATTTAGTGT+TGG | + | chr3_3:64403237-64403256 | Msa0464420:three_prime_UTR | 25.0% |
| TTTCAAATATCTAAGTACGG+TGG | - | chr3_3:64398612-64398631 | None:intergenic | 30.0% | |
| GTCAAATATTTGATCAGTGT+CGG | + | chr3_3:64398669-64398688 | Msa0464420:five_prime_UTR | 30.0% | |
| TTCTTAGAAGTAGAAACTCA+TGG | - | chr3_3:64398787-64398806 | None:intergenic | 30.0% | |
| AATATAGGCAATTTCTATGG+TGG | - | chr3_3:64398857-64398876 | None:intergenic | 30.0% | |
| ATGTTACGGTTAGACTTTAT+TGG | + | chr3_3:64399002-64399021 | Msa0464420:intron | 30.0% | |
| TTGTCTGTATCTTTATCAGT+TGG | - | chr3_3:64399099-64399118 | None:intergenic | 30.0% | |
| AGATACAGACAAAAACAAGA+TGG | + | chr3_3:64399107-64399126 | Msa0464420:CDS | 30.0% | |
| ATTGCAACTTTGTAAGCATA+TGG | - | chr3_3:64399168-64399187 | None:intergenic | 30.0% | |
| !! | TTGAATAAGTTCTGTTTTGG+AGG | - | chr3_3:64399192-64399211 | None:intergenic | 30.0% |
| TCCAAAACAGAACTTATTCA+AGG | + | chr3_3:64399191-64399210 | Msa0464420:CDS | 30.0% | |
| ! | TCCTTGAATAAGTTCTGTTT+TGG | - | chr3_3:64399195-64399214 | None:intergenic | 30.0% |
| TCATATTCCCTATACTTAAC+TGG | + | chr3_3:64399313-64399332 | Msa0464420:CDS | 30.0% | |
| CATATTCCCTATACTTAACT+GGG | + | chr3_3:64399314-64399333 | Msa0464420:CDS | 30.0% | |
| ATATTCCCTATACTTAACTG+GGG | + | chr3_3:64399315-64399334 | Msa0464420:CDS | 30.0% | |
| TCATAAGTCAAAATTACCTG+AGG | - | chr3_3:64399411-64399430 | None:intergenic | 30.0% | |
| CAAAGCTTGAATCTGTAAAA+GGG | - | chr3_3:64399639-64399658 | None:intergenic | 30.0% | |
| ACAAAGCTTGAATCTGTAAA+AGG | - | chr3_3:64399640-64399659 | None:intergenic | 30.0% | |
| ! | ATGAAAGCATAAATAAGTGG+TGG | - | chr3_3:64399664-64399683 | None:intergenic | 30.0% |
| ACCACTTATTTATGCTTTCA+TGG | + | chr3_3:64399663-64399682 | Msa0464420:CDS | 30.0% | |
| CCACTTATTTATGCTTTCAT+GGG | + | chr3_3:64399664-64399683 | Msa0464420:CDS | 30.0% | |
| TTCTGTCAAAAAACCAGATT+AGG | + | chr3_3:64399971-64399990 | Msa0464420:intron | 30.0% | |
| AGAAGAACAAGAAATTCTTC+TGG | + | chr3_3:64400513-64400532 | Msa0464420:CDS | 30.0% | |
| GAAGAACAAGAAATTCTTCT+GGG | + | chr3_3:64400514-64400533 | Msa0464420:CDS | 30.0% | |
| CAATACAACTGATATCAATG+GGG | - | chr3_3:64400552-64400571 | None:intergenic | 30.0% | |
| GACAATACAACTGATATCAA+TGG | - | chr3_3:64400554-64400573 | None:intergenic | 30.0% | |
| !! | GGTCAAAAACTTTAGTTCTA+TGG | - | chr3_3:64400704-64400723 | None:intergenic | 30.0% |
| ! | TTTTGACCATTGATATGTGA+AGG | + | chr3_3:64400716-64400735 | Msa0464420:intron | 30.0% |
| GATTTACCTTCACATATCAA+TGG | - | chr3_3:64400725-64400744 | None:intergenic | 30.0% | |
| AAGGTAAATCACATAGAGAA+AGG | + | chr3_3:64400735-64400754 | Msa0464420:intron | 30.0% | |
| AGGTAAATCACATAGAGAAA+GGG | + | chr3_3:64400736-64400755 | Msa0464420:intron | 30.0% | |
| !!! | CAATTTTAAAACCTTTCCCA+AGG | - | chr3_3:64400806-64400825 | None:intergenic | 30.0% |
| !!! | CTTGGGAAAGGTTTTAAAAT+TGG | + | chr3_3:64400804-64400823 | Msa0464420:CDS | 30.0% |
| AAATGTTCTTCCAATAGCTA+TGG | - | chr3_3:64400956-64400975 | None:intergenic | 30.0% | |
| AAGAACATTTGCATCTATGA+AGG | + | chr3_3:64400966-64400985 | Msa0464420:CDS | 30.0% | |
| ATTAGATGGAAACAGAGAAA+TGG | + | chr3_3:64400996-64401015 | Msa0464420:CDS | 30.0% | |
| ! | TTCTATGACTTCTTGTTATG+TGG | + | chr3_3:64401047-64401066 | Msa0464420:CDS | 30.0% |
| GTCAAAGTAATTCCTAATAG+GGG | + | chr3_3:64401602-64401621 | Msa0464420:intron | 30.0% | |
| TTTAAAGACTAGGACTAAGT+AGG | + | chr3_3:64401662-64401681 | Msa0464420:intron | 30.0% | |
| TGAAACCTGTCACAAAAATA+AGG | - | chr3_3:64401906-64401925 | None:intergenic | 30.0% | |
| TTCTTTAACATAGTTGGAGT+TGG | - | chr3_3:64402089-64402108 | None:intergenic | 30.0% | |
| ACTCCAACTATGTTAAAGAA+AGG | + | chr3_3:64402089-64402108 | Msa0464420:CDS | 30.0% | |
| GTACCTTTCTTTAACATAGT+TGG | - | chr3_3:64402095-64402114 | None:intergenic | 30.0% | |
| CAGAATATTAAGATGGCTAA+CGG | + | chr3_3:64402195-64402214 | Msa0464420:intron | 30.0% | |
| CAAATTACTCAAGGAATATG+AGG | - | chr3_3:64402322-64402341 | None:intergenic | 30.0% | |
| ATTGTGATTATATGTTGCAG+CGG | + | chr3_3:64402356-64402375 | Msa0464420:intron | 30.0% | |
| ACTTCTATGTAACTCTTCAA+AGG | - | chr3_3:64402412-64402431 | None:intergenic | 30.0% | |
| !! | TCTTGAAAAAAGAAGTGTTC+AGG | + | chr3_3:64402431-64402450 | Msa0464420:CDS | 30.0% |
| CAAAATTAATCATGTCTGCT+AGG | + | chr3_3:64402457-64402476 | Msa0464420:intron | 30.0% | |
| CATATGTATATGTAGAAGCT+TGG | + | chr3_3:64402488-64402507 | Msa0464420:intron | 30.0% | |
| TCAAACAAGTAACACATTCT+TGG | - | chr3_3:64402583-64402602 | None:intergenic | 30.0% | |
| AACCCATGAAAAATTCAGTT+AGG | + | chr3_3:64402742-64402761 | Msa0464420:exon | 30.0% | |
| ! | CTCCTAACTGAATTTTTCAT+GGG | - | chr3_3:64402747-64402766 | None:intergenic | 30.0% |
| ! | TCTCCTAACTGAATTTTTCA+TGG | - | chr3_3:64402748-64402767 | None:intergenic | 30.0% |
| ATTCAGTTAGGAGAGAAAAT+TGG | + | chr3_3:64402754-64402773 | Msa0464420:three_prime_UTR | 30.0% | |
| TAGATGATAGCAAAGTCAAA+AGG | + | chr3_3:64402830-64402849 | Msa0464420:three_prime_UTR | 30.0% | |
| ! | TAATTTAATTTCCCCACCTT+AGG | - | chr3_3:64402958-64402977 | None:intergenic | 30.0% |
| AAACCTCTAATGAAATGAGA+GGG | - | chr3_3:64403183-64403202 | None:intergenic | 30.0% | |
| AAAACCTCTAATGAAATGAG+AGG | - | chr3_3:64403184-64403203 | None:intergenic | 30.0% | |
| TGTTGGCAATTCTTGTTAAA+GGG | + | chr3_3:64403254-64403273 | Msa0464420:three_prime_UTR | 30.0% | |
| ACCATTCAAATCTTCTGTTC+AGG | + | chr3_3:64398524-64398543 | Msa0464420:five_prime_UTR | 35.0% | |
| ACCTGAACAGAAGATTTGAA+TGG | - | chr3_3:64398528-64398547 | None:intergenic | 35.0% | |
| ! | CTCTATGTAGGATCTACTTT+TGG | + | chr3_3:64398571-64398590 | Msa0464420:five_prime_UTR | 35.0% |
| !! | GTGTCGGTTAAACAAAAACA+AGG | + | chr3_3:64398685-64398704 | Msa0464420:five_prime_UTR | 35.0% |
| ATCCAACTATATAAACGAGG+AGG | + | chr3_3:64398760-64398779 | Msa0464420:five_prime_UTR | 35.0% | |
| TTAGACTTTATTGGCATCAC+TGG | + | chr3_3:64399011-64399030 | Msa0464420:intron | 35.0% | |
| TTATCAGTTGGAGAATCCAT+TGG | - | chr3_3:64399087-64399106 | None:intergenic | 35.0% | |
| ! | TGGTCTTTGAAAGATCTTAG+AGG | - | chr3_3:64399258-64399277 | None:intergenic | 35.0% |
| TATTCCCTATACTTAACTGG+GGG | + | chr3_3:64399316-64399335 | Msa0464420:CDS | 35.0% | |
| TTTAGGGGAGATATAATAGC+TGG | + | chr3_3:64399360-64399379 | Msa0464420:CDS | 35.0% | |
| ATACTCTAAGCTTGCACATT+TGG | + | chr3_3:64399513-64399532 | Msa0464420:CDS | 35.0% | |
| ! | CCCATGAAAGCATAAATAAG+TGG | - | chr3_3:64399667-64399686 | None:intergenic | 35.0% |
| !!! | TTTACTGCCACTTTTTTTGC+TGG | + | chr3_3:64399802-64399821 | Msa0464420:CDS | 35.0% |
| !!! | TTACTGCCACTTTTTTTGCT+GGG | + | chr3_3:64399803-64399822 | Msa0464420:CDS | 35.0% |
| TGTAATCCCAGCAAAAAAAG+TGG | - | chr3_3:64399812-64399831 | None:intergenic | 35.0% | |
| GTCAATCAAGAATCCTAATC+TGG | - | chr3_3:64399987-64400006 | None:intergenic | 35.0% | |
| TGATATTATCTCCGTGTTGA+AGG | + | chr3_3:64400120-64400139 | Msa0464420:CDS | 35.0% | |
| ! | TTAACATTTTGCAGTGGAAC+TGG | + | chr3_3:64400333-64400352 | Msa0464420:intron | 35.0% |
| !!! | AAGCTTTTTGAGTTTCCTTC+TGG | + | chr3_3:64400376-64400395 | Msa0464420:CDS | 35.0% |
| !!! | AGGTTTTAAAATTGGCGTCA+TGG | + | chr3_3:64400812-64400831 | Msa0464420:CDS | 35.0% |
| GGAGAAATACTCATAAAGAG+AGG | - | chr3_3:64400881-64400900 | None:intergenic | 35.0% | |
| !! | TTTTAGGAAGCCATAGCTAT+TGG | + | chr3_3:64400943-64400962 | Msa0464420:intron | 35.0% |
| TTAGGAACAATGAATGTCGT+TGG | + | chr3_3:64401024-64401043 | Msa0464420:CDS | 35.0% | |
| !!! | GATCGATTTTTTTCCCTTTC+AGG | + | chr3_3:64401256-64401275 | Msa0464420:intron | 35.0% |
| CAATATTAGAGACTGCAGTT+TGG | - | chr3_3:64401321-64401340 | None:intergenic | 35.0% | |
| !! | ATCAGGCAGCAATTTTGATA+TGG | + | chr3_3:64401455-64401474 | Msa0464420:CDS | 35.0% |
| !! | ATTCGATTTTGTTGCTTGCA+TGG | + | chr3_3:64401489-64401508 | Msa0464420:CDS | 35.0% |
| !! | TTCGATTTTGTTGCTTGCAT+GGG | + | chr3_3:64401490-64401509 | Msa0464420:CDS | 35.0% |
| !!! | TGAGACCTTATTTTTGTGAC+AGG | + | chr3_3:64401898-64401917 | Msa0464420:intron | 35.0% |
| AGATCCTATTACAAGTGACA+AGG | + | chr3_3:64401939-64401958 | Msa0464420:CDS | 35.0% | |
| ! | TACTAGCTTCTGTGTATTGT+TGG | - | chr3_3:64402018-64402037 | None:intergenic | 35.0% |
| ACAATACACAGAAGCTAGTA+AGG | + | chr3_3:64402018-64402037 | Msa0464420:CDS | 35.0% | |
| ACTCTTACAATCATTACACC+TGG | - | chr3_3:64402046-64402065 | None:intergenic | 35.0% | |
| TATGTAACTCTTCAAAGGCA+TGG | - | chr3_3:64402407-64402426 | None:intergenic | 35.0% | |
| TTTGGCTAACATAATTGGTC+AGG | + | chr3_3:64402660-64402679 | Msa0464420:CDS | 35.0% | |
| GAGAATGATGAAATAGACAG+TGG | + | chr3_3:64402782-64402801 | Msa0464420:three_prime_UTR | 35.0% | |
| TAGTCCATAGAAAGCTAACA+CGG | + | chr3_3:64403075-64403094 | Msa0464420:three_prime_UTR | 35.0% | |
| TATCCCTCTCATTTCATTAG+AGG | + | chr3_3:64403177-64403196 | Msa0464420:three_prime_UTR | 35.0% | |
| CAAGAATTGCCAACACTAAA+TGG | - | chr3_3:64403249-64403268 | None:intergenic | 35.0% | |
| ! | GTGTTGGCAATTCTTGTTAA+AGG | + | chr3_3:64403253-64403272 | Msa0464420:three_prime_UTR | 35.0% |
| GTTGGCAATTCTTGTTAAAG+GGG | + | chr3_3:64403255-64403274 | Msa0464420:three_prime_UTR | 35.0% | |
| TTGGCAATTCTTGTTAAAGG+GGG | + | chr3_3:64403256-64403275 | Msa0464420:three_prime_UTR | 35.0% | |
| CAGAAGATTTGAATGGTCAC+TGG | - | chr3_3:64398521-64398540 | None:intergenic | 40.0% | |
| GTCCTCCTCGTTTATATAGT+TGG | - | chr3_3:64398765-64398784 | None:intergenic | 40.0% | |
| TAGTTGAGGTGTAAGCAACA+TGG | + | chr3_3:64398931-64398950 | Msa0464420:intron | 40.0% | |
| TTCTCCCCCAGTTAAGTATA+GGG | - | chr3_3:64399323-64399342 | None:intergenic | 40.0% | |
| GTCTTACATAGTCCATACTG+TGG | - | chr3_3:64399541-64399560 | None:intergenic | 40.0% | |
| AGTTCTCGCGATATAGCAAT+AGG | + | chr3_3:64399688-64399707 | Msa0464420:CDS | 40.0% | |
| TATTCTTCTGCATGCGTAAC+AGG | - | chr3_3:64399769-64399788 | None:intergenic | 40.0% | |
| GGATTACACAAGCAACTCTT+GGG | + | chr3_3:64399824-64399843 | Msa0464420:CDS | 40.0% | |
| ! | AAGCAACTCTTGGGATTTTC+AGG | + | chr3_3:64399833-64399852 | Msa0464420:CDS | 40.0% |
| GCTGGTAGTACATGTATATC+CGG | - | chr3_3:64399887-64399906 | None:intergenic | 40.0% | |
| AGTGTAACATTAGTAGCAGC+TGG | - | chr3_3:64399905-64399924 | None:intergenic | 40.0% | |
| AAAACCGACAATAGCAGCAT+GGG | - | chr3_3:64400017-64400036 | None:intergenic | 40.0% | |
| TAAAACCGACAATAGCAGCA+TGG | - | chr3_3:64400018-64400037 | None:intergenic | 40.0% | |
| !!! | TGCTGCTATTGTCGGTTTTA+TGG | + | chr3_3:64400018-64400037 | Msa0464420:CDS | 40.0% |
| !!! | GCTGCTATTGTCGGTTTTAT+GGG | + | chr3_3:64400019-64400038 | Msa0464420:CDS | 40.0% |
| !!! | CTGCTATTGTCGGTTTTATG+GGG | + | chr3_3:64400020-64400039 | Msa0464420:CDS | 40.0% |
| !!! | TGCTATTGTCGGTTTTATGG+GGG | + | chr3_3:64400021-64400040 | Msa0464420:CDS | 40.0% |
| AATTGCCCTTCAACAGCTAA+AGG | + | chr3_3:64400057-64400076 | Msa0464420:CDS | 40.0% | |
| ATTGCCCTTCAACAGCTAAA+GGG | + | chr3_3:64400058-64400077 | Msa0464420:CDS | 40.0% | |
| GAAACCCTTTAGCTGTTGAA+GGG | - | chr3_3:64400065-64400084 | None:intergenic | 40.0% | |
| TGAGAATACTGCCTTCAACA+CGG | - | chr3_3:64400134-64400153 | None:intergenic | 40.0% | |
| GTATTCTCATCAGCCAAACA+TGG | + | chr3_3:64400145-64400164 | Msa0464420:CDS | 40.0% | |
| GAGATAGCATACTCCATGTT+TGG | - | chr3_3:64400161-64400180 | None:intergenic | 40.0% | |
| TTGCAAACATACACACTGGT+AGG | - | chr3_3:64400286-64400305 | None:intergenic | 40.0% | |
| CAATAAATTTGGCGACCAGA+AGG | - | chr3_3:64400394-64400413 | None:intergenic | 40.0% | |
| ATAACACGCGCAGATAAACA+AGG | + | chr3_3:64400590-64400609 | Msa0464420:CDS | 40.0% | |
| !!! | TATTTTAGCGGCGATTACCT+TGG | + | chr3_3:64400786-64400805 | Msa0464420:CDS | 40.0% |
| !! | ATTTTAGCGGCGATTACCTT+GGG | + | chr3_3:64400787-64400806 | Msa0464420:CDS | 40.0% |
| ! | TTTAAAATTGGCGTCATGGC+AGG | + | chr3_3:64400816-64400835 | Msa0464420:CDS | 40.0% |
| ! | AACAGAGAAATGGTAGCGTT+AGG | + | chr3_3:64401006-64401025 | Msa0464420:CDS | 40.0% |
| ! | ACTTCTTGTTATGTGGCAAC+TGG | + | chr3_3:64401054-64401073 | Msa0464420:CDS | 40.0% |
| GATGACAGCAGAAATGATGA+TGG | - | chr3_3:64401422-64401441 | None:intergenic | 40.0% | |
| ! | GTTTTCGTCTCTGTTGAGAT+AGG | + | chr3_3:64401529-64401548 | Msa0464420:CDS | 40.0% |
| GTCTTATGTACACCCCTATT+AGG | - | chr3_3:64401617-64401636 | None:intergenic | 40.0% | |
| AGATTCTCGCATAGCATAAC+CGG | + | chr3_3:64401728-64401747 | Msa0464420:intron | 40.0% | |
| !! | TTGGCCTTGTCACTTGTAAT+AGG | - | chr3_3:64401946-64401965 | None:intergenic | 40.0% |
| !! | AAGGCCAAGAACTGCTATTT+TGG | + | chr3_3:64401958-64401977 | Msa0464420:CDS | 40.0% |
| !!! | AGGCCAAGAACTGCTATTTT+GGG | + | chr3_3:64401959-64401978 | Msa0464420:CDS | 40.0% |
| TTCCCCAAAATAGCAGTTCT+TGG | - | chr3_3:64401965-64401984 | None:intergenic | 40.0% | |
| !! | CTATTTTGGGGAAGATTCCT+GGG | + | chr3_3:64401972-64401991 | Msa0464420:CDS | 40.0% |
| TTTCTATAGACAGATGTCCC+AGG | - | chr3_3:64401992-64402011 | None:intergenic | 40.0% | |
| TGAAATAGACAGTGGCATAG+TGG | + | chr3_3:64402790-64402809 | Msa0464420:three_prime_UTR | 40.0% | |
| AGAGATCCTTATCCTAAGGT+GGG | + | chr3_3:64402943-64402962 | Msa0464420:three_prime_UTR | 40.0% | |
| AATTTCCCCACCTTAGGATA+AGG | - | chr3_3:64402952-64402971 | None:intergenic | 40.0% | |
| TTATTGTGTGTGTGCACAAC+TGG | - | chr3_3:64403018-64403037 | None:intergenic | 40.0% | |
| AGTCCATAGAAAGCTAACAC+GGG | + | chr3_3:64403076-64403095 | Msa0464420:three_prime_UTR | 40.0% | |
| ! | TCAGCAATGCCTTATTGAGC+AGG | - | chr3_3:64398493-64398512 | None:intergenic | 45.0% |
| GTCACTGTTGATGTCTCCAA+TGG | + | chr3_3:64399068-64399087 | Msa0464420:exon | 45.0% | |
| CTTCTCCCCCAGTTAAGTAT+AGG | - | chr3_3:64399324-64399343 | None:intergenic | 45.0% | |
| TGCAAGTCTTTGCATACCTC+AGG | + | chr3_3:64399392-64399411 | Msa0464420:CDS | 45.0% | |
| CGATATAGCAATAGGACCAG+TGG | + | chr3_3:64399696-64399715 | Msa0464420:CDS | 45.0% | |
| GCAGTGGTTTCTCTCTTGTT+GGG | + | chr3_3:64399718-64399737 | Msa0464420:CDS | 45.0% | |
| GGGATTACACAAGCAACTCT+TGG | + | chr3_3:64399823-64399842 | Msa0464420:CDS | 45.0% | |
| CTATCCCATGCTGCTATTGT+CGG | + | chr3_3:64400010-64400029 | Msa0464420:CDS | 45.0% | |
| !!! | GCTATTGTCGGTTTTATGGG+GGG | + | chr3_3:64400022-64400041 | Msa0464420:CDS | 45.0% |
| GGAAACCCTTTAGCTGTTGA+AGG | - | chr3_3:64400066-64400085 | None:intergenic | 45.0% | |
| CAACAGCTAAAGGGTTTCCT+TGG | + | chr3_3:64400067-64400086 | Msa0464420:CDS | 45.0% | |
| GCACTTGCAAACATACACAC+TGG | - | chr3_3:64400290-64400309 | None:intergenic | 45.0% | |
| GATATCAATGGGGCAATTGC+TGG | - | chr3_3:64400542-64400561 | None:intergenic | 45.0% | |
| CCGAGAGAAAGAACCTGAAA+GGG | - | chr3_3:64401272-64401291 | None:intergenic | 45.0% | |
| !! | CCCTTTCAGGTTCTTTCTCT+CGG | + | chr3_3:64401269-64401288 | Msa0464420:intron | 45.0% |
| ACCGAGAGAAAGAACCTGAA+AGG | - | chr3_3:64401273-64401292 | None:intergenic | 45.0% | |
| ! | TTCAGGTTCTTTCTCTCGGT+CGG | + | chr3_3:64401273-64401292 | Msa0464420:intron | 45.0% |
| !! | GACAGCAGAAATGATGATGG+CGG | - | chr3_3:64401419-64401438 | None:intergenic | 45.0% |
| TTCTGCTGTCATCAGTCTTG+TGG | + | chr3_3:64401429-64401448 | Msa0464420:CDS | 45.0% | |
| ! | CATCAGTCTTGTGGACTATC+AGG | + | chr3_3:64401438-64401457 | Msa0464420:CDS | 45.0% |
| !! | CTTGCATGGGAGCATTCTTT+GGG | + | chr3_3:64401503-64401522 | Msa0464420:CDS | 45.0% |
| !! | TTGCATGGGAGCATTCTTTG+GGG | + | chr3_3:64401504-64401523 | Msa0464420:CDS | 45.0% |
| !!! | GGCCAAGAACTGCTATTTTG+GGG | + | chr3_3:64401960-64401979 | Msa0464420:CDS | 45.0% |
| !! | GCTATTTTGGGGAAGATTCC+TGG | + | chr3_3:64401971-64401990 | Msa0464420:CDS | 45.0% |
| ACAGAAGCTAGTAAGGTTCC+AGG | + | chr3_3:64402025-64402044 | Msa0464420:CDS | 45.0% | |
| ACGGATGAAGAAGCAGTGAA+AGG | + | chr3_3:64402214-64402233 | Msa0464420:CDS | 45.0% | |
| GTTACTGACATCGATACGAG+TGG | + | chr3_3:64402378-64402397 | Msa0464420:CDS | 45.0% | |
| ! | CTTGTTTGAGCAGCTTGTTC+TGG | + | chr3_3:64402594-64402613 | Msa0464420:intron | 45.0% |
| ! | CATGGGTTCACATCTAGCTT+TGG | - | chr3_3:64402730-64402749 | None:intergenic | 45.0% |
| CTCCAGAGATCCTTATCCTA+AGG | + | chr3_3:64402939-64402958 | Msa0464420:three_prime_UTR | 45.0% | |
| CACCTTAGGATAAGGATCTC+TGG | - | chr3_3:64402944-64402963 | None:intergenic | 45.0% | |
| CAGAGATCCTTATCCTAAGG+TGG | + | chr3_3:64402942-64402961 | Msa0464420:three_prime_UTR | 45.0% | |
| GAGATCCTTATCCTAAGGTG+GGG | + | chr3_3:64402944-64402963 | Msa0464420:three_prime_UTR | 45.0% | |
| !! | TTAAATTACAATATATAATA+TGG | - | chr3_3:64398983-64399002 | None:intergenic | 5.0% |
| GCACATTTGGCACCACAGTA+TGG | + | chr3_3:64399526-64399545 | Msa0464420:CDS | 50.0% | |
| AAGAGAGAAACCACTGCCAC+TGG | - | chr3_3:64399715-64399734 | None:intergenic | 50.0% | |
| GGCAGTGGTTTCTCTCTTGT+TGG | + | chr3_3:64399717-64399736 | Msa0464420:CDS | 50.0% | |
| ! | CGAAGCACTAACACAGACAC+CGG | + | chr3_3:64399865-64399884 | Msa0464420:intron | 50.0% |
| CGACAATAGCAGCATGGGAT+AGG | - | chr3_3:64400012-64400031 | None:intergenic | 50.0% | |
| TCGGTCGGCGGTAAATTACA+TGG | + | chr3_3:64401288-64401307 | Msa0464420:CDS | 50.0% | |
| TCGGCGGTAAATTACATGGC+TGG | + | chr3_3:64401292-64401311 | Msa0464420:CDS | 50.0% | |
| !! | AATGATGATGGCGGCGAGAA+TGG | - | chr3_3:64401410-64401429 | None:intergenic | 50.0% |
| !! | GCTTGCATGGGAGCATTCTT+TGG | + | chr3_3:64401502-64401521 | Msa0464420:CDS | 50.0% |
| ! | CAGCTTGTTCTGGCAAATCC+TGG | + | chr3_3:64402604-64402623 | Msa0464420:intron | 50.0% |
| TTGTCTGTCACTGCTGAACC+AGG | - | chr3_3:64402625-64402644 | None:intergenic | 50.0% | |
| !! | GCACCCGTGTTAGCTTTCTA+TGG | - | chr3_3:64403082-64403101 | None:intergenic | 50.0% |
| AGCAATAGGACCAGTGGCAG+TGG | + | chr3_3:64399702-64399721 | Msa0464420:CDS | 55.0% | |
| AGCGGCGATTACCTTGGGAA+AGG | + | chr3_3:64400792-64400811 | Msa0464420:CDS | 55.0% | |
| GGCAGGCATGATTGCACTGA+CGG | + | chr3_3:64400833-64400852 | Msa0464420:CDS | 55.0% | |
| AGGTTCTTTCTCTCGGTCGG+CGG | + | chr3_3:64401276-64401295 | Msa0464420:intron | 55.0% | |
| ATGGCGGCGAGAATGGCATT+TGG | - | chr3_3:64401403-64401422 | None:intergenic | 55.0% | |
| CAACAGCTGCTGCAACAGTG+AGG | - | chr3_3:64402696-64402715 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 64398483 | 64403298 | 64398483 | ID=Msa0464420;Name=Msa0464420 |
| chr3_3 | mRNA | 64398483 | 64403298 | 64398483 | ID=Msa0464420-mRNA-1;Parent=Msa0464420;Name=Msa0464420-mRNA-1;_AED=0.18;_eAED=0.18;_QI=369|1|1|1|0.92|0.85|14|548|659 |
| chr3_3 | exon | 64398483 | 64398834 | 64398483 | ID=Msa0464420-mRNA-1:exon:14132;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64399061 | 64399413 | 64399061 | ID=Msa0464420-mRNA-1:exon:14133;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64399505 | 64399553 | 64399505 | ID=Msa0464420-mRNA-1:exon:14134;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64399647 | 64399854 | 64399647 | ID=Msa0464420-mRNA-1:exon:14135;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64399988 | 64400168 | 64399988 | ID=Msa0464420-mRNA-1:exon:14136;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64400347 | 64400412 | 64400347 | ID=Msa0464420-mRNA-1:exon:14137;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64400509 | 64400622 | 64400509 | ID=Msa0464420-mRNA-1:exon:14138;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64400738 | 64400854 | 64400738 | ID=Msa0464420-mRNA-1:exon:14139;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64400949 | 64401075 | 64400949 | ID=Msa0464420-mRNA-1:exon:14140;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64401278 | 64401564 | 64401278 | ID=Msa0464420-mRNA-1:exon:14141;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64401920 | 64402110 | 64401920 | ID=Msa0464420-mRNA-1:exon:14142;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64402198 | 64402280 | 64402198 | ID=Msa0464420-mRNA-1:exon:14143;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64402376 | 64402452 | 64402376 | ID=Msa0464420-mRNA-1:exon:14144;Parent=Msa0464420-mRNA-1 |
| chr3_3 | exon | 64402607 | 64403298 | 64402607 | ID=Msa0464420-mRNA-1:exon:14145;Parent=Msa0464420-mRNA-1 |
| chr3_3 | five_prime_UTR | 64398483 | 64398834 | 64398483 | ID=Msa0464420-mRNA-1:five_prime_utr;Parent=Msa0464420-mRNA-1 |
| chr3_3 | five_prime_UTR | 64399061 | 64399077 | 64399061 | ID=Msa0464420-mRNA-1:five_prime_utr;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64399078 | 64399413 | 64399078 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64399505 | 64399553 | 64399505 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64399647 | 64399854 | 64399647 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64399988 | 64400168 | 64399988 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64400347 | 64400412 | 64400347 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64400509 | 64400622 | 64400509 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64400738 | 64400854 | 64400738 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64400949 | 64401075 | 64400949 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64401278 | 64401564 | 64401278 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64401920 | 64402110 | 64401920 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64402198 | 64402280 | 64402198 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64402376 | 64402452 | 64402376 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | CDS | 64402607 | 64402750 | 64402607 | ID=Msa0464420-mRNA-1:cds;Parent=Msa0464420-mRNA-1 |
| chr3_3 | three_prime_UTR | 64402751 | 64403298 | 64402751 | ID=Msa0464420-mRNA-1:three_prime_utr;Parent=Msa0464420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
