AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0233370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233370 MtrunA17_Chr2g0280911 100.000 304 0 0 1 304 1 304 0.0 632
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233370 AT1G61620.1 76.948 308 64 1 1 301 1 308 1.10e-180 501

Find 89 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTTTATGGGCTTCTTC+TGG 0.130326 2_2:-5707007 None:intergenic
TTGGGAAGTGGTTCTGGTTT+GGG 0.138051 2_2:+5711086 Msa0233370:CDS
TACAACTTGTATTTCAAATT+TGG 0.156889 2_2:+5711268 Msa0233370:three_prime_UTR
AAAATGTTCGGACAGATTTA+TGG 0.181302 2_2:+5710938 Msa0233370:CDS
AGCCAAAGATTTCAAGCATT+TGG 0.241306 2_2:+5711067 Msa0233370:CDS
TCCCAAATGCTTGAAATCTT+TGG 0.245837 2_2:-5711069 None:intergenic
TTTGGGAAGTGGTTCTGGTT+TGG 0.250689 2_2:+5711085 Msa0233370:CDS
TTAGGACAATGAAGGCATTT+TGG 0.269797 2_2:+5710670 Msa0233370:CDS
TGATGATTGATTTGAGTTCT+AGG 0.286126 2_2:-5707066 None:intergenic
TAAAATAAACCTGTTTGTTC+AGG 0.298874 2_2:+5711134 Msa0233370:exon
CAGATTTATGGCTGTGGATA+AGG 0.326437 2_2:+5710950 Msa0233370:CDS
AAGCATTTGGGAAGTGGTTC+TGG 0.338839 2_2:+5711080 Msa0233370:CDS
AAGTGGTTCTGGTTTGGGGC+TGG 0.352897 2_2:+5711091 Msa0233370:CDS
GCCAAAGATTTCAAGCATTT+GGG 0.371192 2_2:+5711068 Msa0233370:CDS
TTTAGATTCTCCTTGCCTTC+CGG 0.371922 2_2:-5710756 None:intergenic
AACCTGTTTGTTCAGGTTGT+TGG 0.381691 2_2:+5711141 Msa0233370:three_prime_UTR
CACTAGTATCTTCAGTGAAC+TGG 0.404759 2_2:-5710800 None:intergenic
CCTAAGGGCTTCTTCCTCAT+AGG 0.405370 2_2:-5710652 None:intergenic
TCTACTTTAACAGAAGCTTC+TGG 0.415630 2_2:-5710708 None:intergenic
GGACAGATGGTGCTTGTAGA+AGG 0.418079 2_2:-5710735 None:intergenic
GATCCTATGAGCTGCCAAAA+AGG 0.432432 2_2:+5707309 Msa0233370:CDS
GAAAAGCGTAAACTCGGTTA+TGG 0.432671 2_2:+5707210 Msa0233370:CDS
ACATTTGGTTAATTTGAAGA+AGG 0.439605 2_2:+5711007 Msa0233370:CDS
GAATGCACTCTTTGCAGAAA+AGG 0.439719 2_2:-5707335 None:intergenic
TGGGAAGTGGTTCTGGTTTG+GGG 0.453578 2_2:+5711087 Msa0233370:CDS
TTCCAACAACCTGAACAAAC+AGG 0.463466 2_2:-5711143 None:intergenic
CACTACATTTAAAATTATCA+AGG 0.466929 2_2:-5711318 None:intergenic
AATTTGAAGAAGGGAGGGAC+AGG 0.467984 2_2:+5711017 Msa0233370:CDS
GGAACGCAGAAGGAGAGGTT+GGG 0.470378 2_2:+5707231 Msa0233370:CDS
ACAAGCATCGAAGGGTTTGA+TGG 0.473841 2_2:-5707262 None:intergenic
CTCCTTGCCTTCCGGACAGA+TGG 0.474833 2_2:-5710748 None:intergenic
GATTTCAAGCATTTGGGAAG+TGG 0.478004 2_2:+5711074 Msa0233370:CDS
TTCTACAAGCACCATCTGTC+CGG 0.484063 2_2:+5710737 Msa0233370:CDS
TAATATAATATATTAGTAAC+GGG 0.485984 2_2:-5711423 None:intergenic
CATTTGGTTAATTTGAAGAA+GGG 0.486407 2_2:+5711008 Msa0233370:CDS
AATTATAACCGTGACAAGAA+TGG 0.487405 2_2:+5710597 Msa0233370:CDS
TGGAACGCAGAAGGAGAGGT+TGG 0.501288 2_2:+5707230 Msa0233370:CDS
CGTGACAAGAATGGTTTCCA+TGG 0.502082 2_2:+5710606 Msa0233370:CDS
AAAATGCCTTCATTGTCCTA+AGG 0.510580 2_2:-5710668 None:intergenic
CGGTAAACCGCCACAGAGGA+TGG 0.513855 2_2:-5707037 None:intergenic
CTTGTGGCCCTCAGTTCATG+TGG 0.518421 2_2:+5710900 Msa0233370:CDS
CCTTCACACTGTTTGCCCCA+TGG 0.518851 2_2:-5710623 None:intergenic
TTCGGACAGATTTATGGCTG+TGG 0.519061 2_2:+5710944 Msa0233370:CDS
CCTATGAGGAAGAAGCCCTT+AGG 0.523457 2_2:+5710652 Msa0233370:CDS
AACCGCCACAGAGGATGGCT+TGG 0.526777 2_2:-5707032 None:intergenic
CACCATCTGTCCGGAAGGCA+AGG 0.529022 2_2:+5710746 Msa0233370:CDS
AAATGCCTTCATTGTCCTAA+GGG 0.533013 2_2:-5710667 None:intergenic
CTCAGAAGAAAGACATTCAA+AGG 0.533692 2_2:+5707373 Msa0233370:CDS
GGCATGTAAAGAGAGACATT+TGG 0.536637 2_2:+5710992 Msa0233370:CDS
GTATCTTCAGTGAACTGGAC+AGG 0.542980 2_2:-5710795 None:intergenic
ACAGAGGGAACAAGCATCGA+AGG 0.543742 2_2:-5707271 None:intergenic
TGGTTAATTTGAAGAAGGGA+GGG 0.547704 2_2:+5711012 Msa0233370:CDS
TAATTTCTATCACTGTATTG+TGG 0.564386 2_2:-5710579 None:intergenic
TCTCAGTATATAATTGACAT+TGG 0.566560 2_2:+5711370 Msa0233370:three_prime_UTR
TTGGTTAATTTGAAGAAGGG+AGG 0.567285 2_2:+5711011 Msa0233370:CDS
ATAATATAATATATTAGTAA+CGG 0.571863 2_2:-5711424 None:intergenic
AGAAATCGAATGCTCTTGAT+CGG 0.572848 2_2:+5710829 Msa0233370:CDS
GTGACAAGAATGGTTTCCAT+GGG 0.573316 2_2:+5710607 Msa0233370:CDS
GCATTTGATCAGCAAAATCA+TGG 0.574722 2_2:+5710549 Msa0233370:CDS
GAAGCTTCTGGTGTAGCAGA+AGG 0.576976 2_2:-5710696 None:intergenic
GGCCACAAGTGACATTGTAT+TGG 0.579436 2_2:-5710886 None:intergenic
GAGGCATTTCTGTGATAGAT+CGG 0.582822 2_2:-5707140 None:intergenic
AGAAGCCCTTAGGACAATGA+AGG 0.584899 2_2:+5710662 Msa0233370:CDS
CATGGAAACCATTCTTGTCA+CGG 0.586120 2_2:-5710605 None:intergenic
GGTTTGTCTTGTTTGCAACA+AGG 0.588818 2_2:+5710971 Msa0233370:CDS
TGTGAAGGTCACTTCCTATG+AGG 0.588979 2_2:+5710638 Msa0233370:CDS
TGACATTGTATTGGTGAGAG+TGG 0.594170 2_2:-5710877 None:intergenic
TACGATGAAAAGCGTAAACT+CGG 0.604188 2_2:+5707204 Msa0233370:CDS
CACCAATACAATGTCACTTG+TGG 0.609974 2_2:+5710884 Msa0233370:CDS
GAACGCAGAAGGAGAGGTTG+GGG 0.614551 2_2:+5707232 Msa0233370:CDS
TTGTGGCCCTCAGTTCATGT+GGG 0.616501 2_2:+5710901 Msa0233370:CDS
GACATGCCCACATGAACTGA+GGG 0.621218 2_2:-5710907 None:intergenic
ACAAGCACCATCTGTCCGGA+AGG 0.622153 2_2:+5710741 Msa0233370:CDS
GCAGAAGGAGAGGTTGGGGA+AGG 0.622647 2_2:+5707236 Msa0233370:CDS
ACTCGGTTATGGAACGCAGA+AGG 0.622656 2_2:+5707221 Msa0233370:CDS
GATTAACGATTTGAGACAGA+GGG 0.630496 2_2:-5707286 None:intergenic
AGACATGCCCACATGAACTG+AGG 0.633451 2_2:-5710908 None:intergenic
GCTGATGACCATGTGAACAT+TGG 0.635081 2_2:+5711399 Msa0233370:three_prime_UTR
CCATGGGGCAAACAGTGTGA+AGG 0.639816 2_2:+5710623 Msa0233370:CDS
GTTATGGAACGCAGAAGGAG+AGG 0.647965 2_2:+5707226 Msa0233370:CDS
AACCAAGCCATCCTCTGTGG+CGG 0.650968 2_2:+5707030 Msa0233370:five_prime_UTR
CAGAGGGAACAAGCATCGAA+GGG 0.655606 2_2:-5707270 None:intergenic
CGATTAACGATTTGAGACAG+AGG 0.657638 2_2:-5707287 None:intergenic
TTGTTCTTCGAATGTCGCTG+AGG 0.663075 2_2:-5707159 None:intergenic
TAACGGGACCAATGTTCACA+TGG 0.671475 2_2:-5711407 None:intergenic
CAAAACCAAGCCATCCTCTG+TGG 0.702047 2_2:+5707027 Msa0233370:five_prime_UTR
ATTTGAGTTCTAGGTCGTCG+CGG 0.729985 2_2:-5707057 None:intergenic
GTCGCGGTAAACCGCCACAG+AGG 0.732081 2_2:-5707041 None:intergenic
TGACAAGAATGGTTTCCATG+GGG 0.745306 2_2:+5710608 Msa0233370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTGAAATTATGATAT+GGG + chr2_2:5707480-5707499 Msa0233370:intron 10.0%
!!! TTAATGTTATTTTTTTATGA+TGG - chr2_2:5709107-5709126 None:intergenic 10.0%
!!! TAATTTTTTATCTATGATTT+TGG + chr2_2:5709789-5709808 Msa0233370:intron 10.0%
!!! AATTTTTTATCTATGATTTT+GGG + chr2_2:5709790-5709809 Msa0233370:intron 10.0%
!!! TTTATTTTATTTTTTTGAGA+GGG - chr2_2:5710373-5710392 None:intergenic 10.0%
!!! TTTTATTTTATTTTTTTGAG+AGG - chr2_2:5710374-5710393 None:intergenic 10.0%
!! TAATATAATATATTAGTAAC+GGG - chr2_2:5711426-5711445 None:intergenic 10.0%
!! GTTTAATTGAAATTATGATA+TGG + chr2_2:5707479-5707498 Msa0233370:intron 15.0%
!!! TTATTTTTTAGAAGAAAAAG+TGG + chr2_2:5710207-5710226 Msa0233370:intron 15.0%
!!! TATTTTTTAGAAGAAAAAGT+GGG + chr2_2:5710208-5710227 Msa0233370:intron 15.0%
!!! ATTTCCATTTTCAATAAAAT+AGG + chr2_2:5710439-5710458 Msa0233370:intron 15.0%
!! AAAAATAAACCAAATCAAAC+AGG - chr2_2:5707611-5707630 None:intergenic 20.0%
!!! AACATAAAATGATGATGAAT+TGG + chr2_2:5708183-5708202 Msa0233370:intron 20.0%
!!! TATGTTTTGTTACAATGTAT+TGG - chr2_2:5708453-5708472 None:intergenic 20.0%
!! TAGATTAAAATGAAATCAAG+AGG - chr2_2:5708692-5708711 None:intergenic 20.0%
!!! TCTTGATTTCATTTTAATCT+AGG + chr2_2:5708691-5708710 Msa0233370:intron 20.0%
!!! ATTTCATTTTAATCTAGGAT+TGG + chr2_2:5708696-5708715 Msa0233370:intron 20.0%
!!! TTTTAATTGAAGTATGATTC+AGG + chr2_2:5708980-5708999 Msa0233370:intron 20.0%
!!! TGTTATTTTTTTATGATGGT+GGG - chr2_2:5709103-5709122 None:intergenic 20.0%
!!! ATGTTATTTTTTTATGATGG+TGG - chr2_2:5709104-5709123 None:intergenic 20.0%
!!! ATAACATTAATGCTTTTCAA+AGG + chr2_2:5709117-5709136 Msa0233370:intron 20.0%
!!! TAACATTAATGCTTTTCAAA+GGG + chr2_2:5709118-5709137 Msa0233370:intron 20.0%
!!! TTCTTTTAAGAACATTAAAG+TGG + chr2_2:5709262-5709281 Msa0233370:intron 20.0%
!! TTTAAGAACATTAAGAATCA+TGG - chr2_2:5709474-5709493 None:intergenic 20.0%
!!! ACTTTTGTATCTATGATTTT+GGG - chr2_2:5709696-5709715 None:intergenic 20.0%
!!! TACTTTTGTATCTATGATTT+TGG - chr2_2:5709697-5709716 None:intergenic 20.0%
!! AAAAAATAATGTAAAGCGAT+GGG - chr2_2:5710196-5710215 None:intergenic 20.0%
!! TAAAAAATAATGTAAAGCGA+TGG - chr2_2:5710197-5710216 None:intergenic 20.0%
!! TTAGTAAAAAAAGATGATGA+GGG - chr2_2:5711238-5711257 None:intergenic 20.0%
!! ATTAGTAAAAAAAGATGATG+AGG - chr2_2:5711239-5711258 None:intergenic 20.0%
!! TACAACTTGTATTTCAAATT+TGG + chr2_2:5711268-5711287 Msa0233370:three_prime_UTR 20.0%
!!! CACTACATTTAAAATTATCA+AGG - chr2_2:5711321-5711340 None:intergenic 20.0%
!!! ATATGGGTTGTTTAATTTGT+TGG + chr2_2:5707496-5707515 Msa0233370:intron 25.0%
!!! CAATGTTTTGTTTGTTACTT+AGG + chr2_2:5707555-5707574 Msa0233370:intron 25.0%
!! AAGATACAATTTTCGTTAGT+GGG - chr2_2:5707698-5707717 None:intergenic 25.0%
! ATGATTGAAATAAGCTGAAA+AGG + chr2_2:5707915-5707934 Msa0233370:intron 25.0%
! TGATTGAAATAAGCTGAAAA+GGG + chr2_2:5707916-5707935 Msa0233370:intron 25.0%
! TCAATGAATTTCATGTTTCT+GGG - chr2_2:5708076-5708095 None:intergenic 25.0%
! ATCAATGAATTTCATGTTTC+TGG - chr2_2:5708077-5708096 None:intergenic 25.0%
! TGAAATCCTAAAATGAATCT+TGG + chr2_2:5708393-5708412 Msa0233370:intron 25.0%
!! ATTTGAGAATCTTCCTTTTA+TGG - chr2_2:5708596-5708615 None:intergenic 25.0%
!!! GTTATTTTTTTATGATGGTG+GGG - chr2_2:5709102-5709121 None:intergenic 25.0%
! AATCAATAGCTAACATAGAA+AGG + chr2_2:5709143-5709162 Msa0233370:intron 25.0%
! TGAAACTCAAACTCAATATA+AGG - chr2_2:5709237-5709256 None:intergenic 25.0%
! TTAAGAACATTAAAGTGGAA+TGG + chr2_2:5709267-5709286 Msa0233370:intron 25.0%
! CAACTCAATATAATGCTATT+GGG + chr2_2:5709510-5709529 Msa0233370:intron 25.0%
! TCTGTTAAATTTCCATCAAT+TGG + chr2_2:5709816-5709835 Msa0233370:intron 25.0%
! TAATGTTTACAACTTAACAC+TGG - chr2_2:5710402-5710421 None:intergenic 25.0%
!! TCCATTTTCAATAAAATAGG+AGG + chr2_2:5710442-5710461 Msa0233370:intron 25.0%
! AGAAAAATTAATGTTGCAGA+AGG + chr2_2:5710512-5710531 Msa0233370:CDS 25.0%
! TAATTTCTATCACTGTATTG+TGG - chr2_2:5710582-5710601 None:intergenic 25.0%
!! TGTCTTTTGCAAAAAATGTT+CGG + chr2_2:5710926-5710945 Msa0233370:CDS 25.0%
!! ACATTTGGTTAATTTGAAGA+AGG + chr2_2:5711007-5711026 Msa0233370:CDS 25.0%
!! CATTTGGTTAATTTGAAGAA+GGG + chr2_2:5711008-5711027 Msa0233370:CDS 25.0%
! TAAAATAAACCTGTTTGTTC+AGG + chr2_2:5711134-5711153 Msa0233370:exon 25.0%
! TCTCAGTATATAATTGACAT+TGG + chr2_2:5711370-5711389 Msa0233370:three_prime_UTR 25.0%
!! TGATGATTGATTTGAGTTCT+AGG - chr2_2:5707069-5707088 None:intergenic 30.0%
TAATAAGTGCCTGTTTGATT+TGG + chr2_2:5707599-5707618 Msa0233370:intron 30.0%
! GAAGATACAATTTTCGTTAG+TGG - chr2_2:5707699-5707718 None:intergenic 30.0%
CATTATTCATAAGCTTGTCA+CGG - chr2_2:5707745-5707764 None:intergenic 30.0%
!!! AGTTTTGTTACAAGTGCTTA+GGG - chr2_2:5707821-5707840 None:intergenic 30.0%
TCATTAGCTAATAGCTATCT+TGG + chr2_2:5707888-5707907 Msa0233370:intron 30.0%
TGAAAAGGGAAAACAACTTA+TGG + chr2_2:5707930-5707949 Msa0233370:intron 30.0%
AACTATTGGAGGAATACTAA+GGG - chr2_2:5708047-5708066 None:intergenic 30.0%
AAACTATTGGAGGAATACTA+AGG - chr2_2:5708048-5708067 None:intergenic 30.0%
TAATACAGGTCTGTTTGAAT+TGG - chr2_2:5708328-5708347 None:intergenic 30.0%
AACTATTAGGTGGATAATAC+AGG - chr2_2:5708342-5708361 None:intergenic 30.0%
! CTCAAACCAAGATTCATTTT+AGG - chr2_2:5708402-5708421 None:intergenic 30.0%
ATTCAAGCCAGAAATATTCT+TGG - chr2_2:5708656-5708675 None:intergenic 30.0%
AGAGCAACTCTTTATTAAGT+GGG - chr2_2:5708776-5708795 None:intergenic 30.0%
TATGATATGAGTTCAAAGTG+AGG - chr2_2:5708894-5708913 None:intergenic 30.0%
AAACTCAATATAAGGCTACT+CGG - chr2_2:5709229-5709248 None:intergenic 30.0%
ATTAAAGTGGAATGGTTTAG+TGG + chr2_2:5709275-5709294 Msa0233370:intron 30.0%
!!! TGAGATAGTTTGCTTTTTCT+TGG - chr2_2:5709328-5709347 None:intergenic 30.0%
! ATTTGCTTTCTCTTGTTTGT+TGG + chr2_2:5709415-5709434 Msa0233370:intron 30.0%
AGAATCATGGAACAATTTAC+TGG - chr2_2:5709461-5709480 None:intergenic 30.0%
CCAATAGCATTATATTGAGT+TGG - chr2_2:5709512-5709531 None:intergenic 30.0%
CCAACTCAATATAATGCTAT+TGG + chr2_2:5709509-5709528 Msa0233370:intron 30.0%
!!! ATTTTAACTACTAGTCGCAT+TGG + chr2_2:5709614-5709633 Msa0233370:intron 30.0%
TCATGCTATGTTTATGATGA+TGG + chr2_2:5709644-5709663 Msa0233370:intron 30.0%
!! GTTTATGATGATGGAATTGA+AGG + chr2_2:5709653-5709672 Msa0233370:intron 30.0%
TGTTTCCAATTCCAACATAA+GGG - chr2_2:5709929-5709948 None:intergenic 30.0%
ATGTTTCCAATTCCAACATA+AGG - chr2_2:5709930-5709949 None:intergenic 30.0%
AGTTTGATGAGTTCAAAGTT+AGG + chr2_2:5710018-5710037 Msa0233370:intron 30.0%
! GATCACTATTAGCTTGAATA+GGG + chr2_2:5710121-5710140 Msa0233370:intron 30.0%
!! TTTTTAGAAGAAAAAGTGGG+AGG + chr2_2:5710211-5710230 Msa0233370:intron 30.0%
AAAGACGACATATACTTGAA+GGG - chr2_2:5710305-5710324 None:intergenic 30.0%
TAAAGACGACATATACTTGA+AGG - chr2_2:5710306-5710325 None:intergenic 30.0%
! GCCTCCTATTTTATTGAAAA+TGG - chr2_2:5710446-5710465 None:intergenic 30.0%
AATTATAACCGTGACAAGAA+TGG + chr2_2:5710597-5710616 Msa0233370:CDS 30.0%
AAAATGTTCGGACAGATTTA+TGG + chr2_2:5710938-5710957 Msa0233370:CDS 30.0%
!!! TTATTTTAAGTCTTCATCGC+AGG - chr2_2:5711122-5711141 None:intergenic 30.0%
!!! TGGCTTGGTTTTGTGTTTAT+GGG - chr2_2:5707020-5707039 None:intergenic 35.0%
!!! ATGGCTTGGTTTTGTGTTTA+TGG - chr2_2:5707021-5707040 None:intergenic 35.0%
! TACGATGAAAAGCGTAAACT+CGG + chr2_2:5707204-5707223 Msa0233370:CDS 35.0%
! GATTAACGATTTGAGACAGA+GGG - chr2_2:5707289-5707308 None:intergenic 35.0%
CTCAGAAGAAAGACATTCAA+AGG + chr2_2:5707373-5707392 Msa0233370:CDS 35.0%
! TTGTTACTTAGGTGCTTGTT+TGG + chr2_2:5707566-5707585 Msa0233370:intron 35.0%
!!! CAGTTTTGTTACAAGTGCTT+AGG - chr2_2:5707822-5707841 None:intergenic 35.0%
ACAACTTATGGACATGTCAT+TGG + chr2_2:5707942-5707961 Msa0233370:intron 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr2_2:5708021-5708040 Msa0233370:intron 35.0%
!! ATGAATTTCATGTTTCTGGG+TGG - chr2_2:5708073-5708092 None:intergenic 35.0%
CTCATGCCAATTATTGAGAT+TGG - chr2_2:5708144-5708163 None:intergenic 35.0%
! TGATGATGAATTGGAAAAGC+TGG + chr2_2:5708192-5708211 Msa0233370:intron 35.0%
TTCGAGATGGAGAAACTATT+AGG - chr2_2:5708355-5708374 None:intergenic 35.0%
ATTGATCTCATGTTTCGAGA+TGG - chr2_2:5708368-5708387 None:intergenic 35.0%
TCAAATCTCCATTGTTTGCA+TGG + chr2_2:5708427-5708446 Msa0233370:intron 35.0%
CTCTGTTGAATTAGAAAAGC+TGG + chr2_2:5708476-5708495 Msa0233370:intron 35.0%
! CTTTTATGGTTTCCATGTTC+TGG - chr2_2:5708582-5708601 None:intergenic 35.0%
CAGAACATGGAAACCATAAA+AGG + chr2_2:5708580-5708599 Msa0233370:intron 35.0%
GAAGATTCTCAAATAGTGCT+GGG + chr2_2:5708602-5708621 Msa0233370:intron 35.0%
ACACTGTCCAAGAATATTTC+TGG + chr2_2:5708646-5708665 Msa0233370:intron 35.0%
! TTTATTAAGTGGGCTCTATC+AGG - chr2_2:5708766-5708785 None:intergenic 35.0%
CAGAGCAACTCTTTATTAAG+TGG - chr2_2:5708777-5708796 None:intergenic 35.0%
TTAATAAAGAGTTGCTCTGC+TGG + chr2_2:5708778-5708797 Msa0233370:intron 35.0%
ACCAATGCAAAGACAAAATG+TGG - chr2_2:5708956-5708975 None:intergenic 35.0%
AAGTATGATTCAGGATTCCA+GGG + chr2_2:5708989-5709008 Msa0233370:intron 35.0%
ATGTATAGGTTCCCTTCTAT+GGG - chr2_2:5709030-5709049 None:intergenic 35.0%
AACCTATACATCAACAAAGC+TGG + chr2_2:5709039-5709058 Msa0233370:intron 35.0%
TAGAAAGGCAATTCCTTCTT+AGG + chr2_2:5709158-5709177 Msa0233370:intron 35.0%
AGAAAGGCAATTCCTTCTTA+GGG + chr2_2:5709159-5709178 Msa0233370:intron 35.0%
GAGACAAATATATCTATGCC+TGG + chr2_2:5709191-5709210 Msa0233370:intron 35.0%
! ATGGTTTAGTGGACATAGTT+TGG + chr2_2:5709286-5709305 Msa0233370:intron 35.0%
! TGGTTTAGTGGACATAGTTT+GGG + chr2_2:5709287-5709306 Msa0233370:intron 35.0%
ATCAAAATACTGATGCAGTC+TGG - chr2_2:5709381-5709400 None:intergenic 35.0%
AACAATTTACTGGACAGAGT+TGG - chr2_2:5709451-5709470 None:intergenic 35.0%
AAAAGAGGTGGTTCTTTCTT+AGG - chr2_2:5709572-5709591 None:intergenic 35.0%
ACTTCTCTCATACCAATTGA+TGG - chr2_2:5709831-5709850 None:intergenic 35.0%
CTACAATCCTTGACAAAGTT+CGG - chr2_2:5709984-5710003 None:intergenic 35.0%
AGTTCAAAGTTAGGATCAGT+AGG + chr2_2:5710027-5710046 Msa0233370:intron 35.0%
TTTCTTAAATAGAGAGAGCG+TGG + chr2_2:5710079-5710098 Msa0233370:intron 35.0%
! GGATCACTATTAGCTTGAAT+AGG + chr2_2:5710120-5710139 Msa0233370:intron 35.0%
! AAGAAAAAGTGGGAGGTTTT+TGG + chr2_2:5710218-5710237 Msa0233370:intron 35.0%
ACTCCTTCACAAATTCTAGT+GGG + chr2_2:5710264-5710283 Msa0233370:intron 35.0%
AAGACGACATATACTTGAAG+GGG - chr2_2:5710304-5710323 None:intergenic 35.0%
GCATTTGATCAGCAAAATCA+TGG + chr2_2:5710549-5710568 Msa0233370:CDS 35.0%
AAATGCCTTCATTGTCCTAA+GGG - chr2_2:5710670-5710689 None:intergenic 35.0%
AAAATGCCTTCATTGTCCTA+AGG - chr2_2:5710671-5710690 None:intergenic 35.0%
!!! TTAGGACAATGAAGGCATTT+TGG + chr2_2:5710670-5710689 Msa0233370:CDS 35.0%
TCTACTTTAACAGAAGCTTC+TGG - chr2_2:5710711-5710730 None:intergenic 35.0%
AGAAATCGAATGCTCTTGAT+CGG + chr2_2:5710829-5710848 Msa0233370:CDS 35.0%
! TTGGTTAATTTGAAGAAGGG+AGG + chr2_2:5711011-5711030 Msa0233370:CDS 35.0%
! TGGTTAATTTGAAGAAGGGA+GGG + chr2_2:5711012-5711031 Msa0233370:CDS 35.0%
AGCCAAAGATTTCAAGCATT+TGG + chr2_2:5711067-5711086 Msa0233370:CDS 35.0%
GCCAAAGATTTCAAGCATTT+GGG + chr2_2:5711068-5711087 Msa0233370:CDS 35.0%
TCCCAAATGCTTGAAATCTT+TGG - chr2_2:5711072-5711091 None:intergenic 35.0%
! TTTTGCAGAAAGAGGGGTTA+GGG - chr2_2:5707117-5707136 None:intergenic 40.0%
! ATTTTGCAGAAAGAGGGGTT+AGG - chr2_2:5707118-5707137 None:intergenic 40.0%
! TCGGTGATTTTGCAGAAAGA+GGG - chr2_2:5707124-5707143 None:intergenic 40.0%
! ATCGGTGATTTTGCAGAAAG+AGG - chr2_2:5707125-5707144 None:intergenic 40.0%
! GAGGCATTTCTGTGATAGAT+CGG - chr2_2:5707143-5707162 None:intergenic 40.0%
! GAGTTTACGCTTTTCATCGT+AGG - chr2_2:5707205-5707224 None:intergenic 40.0%
! GAAAAGCGTAAACTCGGTTA+TGG + chr2_2:5707210-5707229 Msa0233370:CDS 40.0%
! CGATTAACGATTTGAGACAG+AGG - chr2_2:5707290-5707309 None:intergenic 40.0%
! TGCAGAAAAGGTGACCTTTT+TGG - chr2_2:5707326-5707345 None:intergenic 40.0%
GAATGCACTCTTTGCAGAAA+AGG - chr2_2:5707338-5707357 None:intergenic 40.0%
TTTCTGGGTGGAGAAACTAT+TGG - chr2_2:5708061-5708080 None:intergenic 40.0%
TATTGAGATTGGAGCTCCAA+CGG - chr2_2:5708133-5708152 None:intergenic 40.0%
GGAGCTCCAATCTCAATAAT+TGG + chr2_2:5708135-5708154 Msa0233370:intron 40.0%
! GCTTAGTATCTAGAACTGGA+AGG + chr2_2:5708221-5708240 Msa0233370:intron 40.0%
GAGATGGAGAAACTATTAGG+TGG - chr2_2:5708352-5708371 None:intergenic 40.0%
! TGTATTGGCCATGCAAACAA+TGG - chr2_2:5708438-5708457 None:intergenic 40.0%
!! TGTTCTGGTTTCAGAGTTTG+AGG - chr2_2:5708567-5708586 None:intergenic 40.0%
!! CAAACTCTGAAACCAGAACA+TGG + chr2_2:5708567-5708586 Msa0233370:intron 40.0%
GGAAGATTCTCAAATAGTGC+TGG + chr2_2:5708601-5708620 Msa0233370:intron 40.0%
AATGTGGCCAAACTTTGTCA+AGG - chr2_2:5708940-5708959 None:intergenic 40.0%
! GCCACATTTTGTCTTTGCAT+TGG + chr2_2:5708952-5708971 Msa0233370:intron 40.0%
GAAGTATGATTCAGGATTCC+AGG + chr2_2:5708988-5709007 Msa0233370:intron 40.0%
TAGACCATGTTTCCCATAGA+AGG + chr2_2:5709015-5709034 Msa0233370:intron 40.0%
AGACCATGTTTCCCATAGAA+GGG + chr2_2:5709016-5709035 Msa0233370:intron 40.0%
GATGTATAGGTTCCCTTCTA+TGG - chr2_2:5709031-5709050 None:intergenic 40.0%
!! TGCCAGCTTTGTTGATGTAT+AGG - chr2_2:5709044-5709063 None:intergenic 40.0%
GCACTGTCTTCTAACATTTG+AGG - chr2_2:5709080-5709099 None:intergenic 40.0%
ACTCGGAAGTCTAATATTCC+AGG - chr2_2:5709212-5709231 None:intergenic 40.0%
TTCTTTCTTAGGATCAGCAG+TGG - chr2_2:5709561-5709580 None:intergenic 40.0%
ATACTGTTTGCAGCGAAAAG+AGG - chr2_2:5709587-5709606 None:intergenic 40.0%
TAACTACTAGTCGCATTGGA+AGG + chr2_2:5709618-5709637 Msa0233370:intron 40.0%
AATCGTGTACCTTGATCAGA+TGG + chr2_2:5709737-5709756 Msa0233370:intron 40.0%
CAATTGGTATGAGAGAAGTC+AGG + chr2_2:5709832-5709851 Msa0233370:intron 40.0%
TTCCAGCTTTGCTGATGTAT+GGG + chr2_2:5709901-5709920 Msa0233370:intron 40.0%
ATGTATGGGTTCCCTTATGT+TGG + chr2_2:5709915-5709934 Msa0233370:intron 40.0%
CTTTGTCAAGGATTGTAGAC+TGG + chr2_2:5709986-5710005 Msa0233370:intron 40.0%
CACTCCTTCACAAATTCTAG+TGG + chr2_2:5710263-5710282 Msa0233370:intron 40.0%
!! TTTTGAGAGGGACTTAACAC+TGG - chr2_2:5710361-5710380 None:intergenic 40.0%
GCAGAAGCAAGAAAAAGAAG+AGG + chr2_2:5710485-5710504 Msa0233370:CDS 40.0%
CATGGAAACCATTCTTGTCA+CGG - chr2_2:5710608-5710627 None:intergenic 40.0%
GTGACAAGAATGGTTTCCAT+GGG + chr2_2:5710607-5710626 Msa0233370:CDS 40.0%
TGACAAGAATGGTTTCCATG+GGG + chr2_2:5710608-5710627 Msa0233370:CDS 40.0%
TTTAGATTCTCCTTGCCTTC+CGG - chr2_2:5710759-5710778 None:intergenic 40.0%
CACTAGTATCTTCAGTGAAC+TGG - chr2_2:5710803-5710822 None:intergenic 40.0%
! TGACATTGTATTGGTGAGAG+TGG - chr2_2:5710880-5710899 None:intergenic 40.0%
! CACCAATACAATGTCACTTG+TGG + chr2_2:5710884-5710903 Msa0233370:CDS 40.0%
CAGATTTATGGCTGTGGATA+AGG + chr2_2:5710950-5710969 Msa0233370:CDS 40.0%
!! GGTTTGTCTTGTTTGCAACA+AGG + chr2_2:5710971-5710990 Msa0233370:CDS 40.0%
GGCATGTAAAGAGAGACATT+TGG + chr2_2:5710992-5711011 Msa0233370:CDS 40.0%
GATTTCAAGCATTTGGGAAG+TGG + chr2_2:5711074-5711093 Msa0233370:CDS 40.0%
!! AACCTGTTTGTTCAGGTTGT+TGG + chr2_2:5711141-5711160 Msa0233370:three_prime_UTR 40.0%
TTCCAACAACCTGAACAAAC+AGG - chr2_2:5711146-5711165 None:intergenic 40.0%
!! ATTTGAGTTCTAGGTCGTCG+CGG - chr2_2:5707060-5707079 None:intergenic 45.0%
! CGGTGATTTTGCAGAAAGAG+GGG - chr2_2:5707123-5707142 None:intergenic 45.0%
TTGTTCTTCGAATGTCGCTG+AGG - chr2_2:5707162-5707181 None:intergenic 45.0%
!! ACAAGCATCGAAGGGTTTGA+TGG - chr2_2:5707265-5707284 None:intergenic 45.0%
GATCCTATGAGCTGCCAAAA+AGG + chr2_2:5707309-5707328 Msa0233370:CDS 45.0%
!! TGACCTTTTTGGCAGCTCAT+AGG - chr2_2:5707315-5707334 None:intergenic 45.0%
CAAGTGCTTAGGGTCTGTTT+GGG - chr2_2:5707811-5707830 None:intergenic 45.0%
ACAAGTGCTTAGGGTCTGTT+TGG - chr2_2:5707812-5707831 None:intergenic 45.0%
TACTAAGGGCCTGTTTGGAT+TGG - chr2_2:5708033-5708052 None:intergenic 45.0%
AGGAATACTAAGGGCCTGTT+TGG - chr2_2:5708038-5708057 None:intergenic 45.0%
! GCAGGCTTAGTATCTAGAAC+TGG + chr2_2:5708217-5708236 Msa0233370:intron 45.0%
TGTGACACTGTTCGAGAGAA+GGG - chr2_2:5708273-5708292 None:intergenic 45.0%
TTGTGACACTGTTCGAGAGA+AGG - chr2_2:5708274-5708293 None:intergenic 45.0%
CTGGTTTCAGAGTTTGAGGA+AGG - chr2_2:5708563-5708582 None:intergenic 45.0%
AAAGCCACCACGTGTTGAAA+TGG - chr2_2:5708722-5708741 None:intergenic 45.0%
ATTTCAACACGTGGTGGCTT+TGG + chr2_2:5708721-5708740 Msa0233370:intron 45.0%
TTTCAACACGTGGTGGCTTT+GGG + chr2_2:5708722-5708741 Msa0233370:intron 45.0%
TGACACCATCAACCACATGT+GGG + chr2_2:5708806-5708825 Msa0233370:intron 45.0%
CAGTGATCCAAACCAAAGGT+GGG - chr2_2:5708858-5708877 None:intergenic 45.0%
CTAGCAGTGATCCAAACCAA+AGG - chr2_2:5708862-5708881 None:intergenic 45.0%
CTGCGATCCTTGACAAAGTT+TGG + chr2_2:5708930-5708949 Msa0233370:intron 45.0%
GTTCCCTTCTATGGGAAACA+TGG - chr2_2:5709022-5709041 None:intergenic 45.0%
CAATTCCTTCTTAGGGACAG+TGG + chr2_2:5709166-5709185 Msa0233370:intron 45.0%
TACTGATGCAGTCTGGCTAT+GGG - chr2_2:5709374-5709393 None:intergenic 45.0%
ATACTGATGCAGTCTGGCTA+TGG - chr2_2:5709375-5709394 None:intergenic 45.0%
AAACGTGTGCCATCTGATCA+AGG - chr2_2:5709749-5709768 None:intergenic 45.0%
CTTCCAGCTTTGCTGATGTA+TGG + chr2_2:5709900-5709919 Msa0233370:intron 45.0%
AACCCATACATCAGCAAAGC+TGG - chr2_2:5709906-5709925 None:intergenic 45.0%
GGGTTCCCTTATGTTGGAAT+TGG + chr2_2:5709921-5709940 Msa0233370:intron 45.0%
ATAGTGATCCAGACCACAAG+TGG - chr2_2:5710110-5710129 None:intergenic 45.0%
!!! AGTGGGAGGTTTTTGGTTCA+TGG + chr2_2:5710225-5710244 Msa0233370:intron 45.0%
CCACCCACTAGAATTTGTGA+AGG - chr2_2:5710270-5710289 None:intergenic 45.0%
CCTTCACAAATTCTAGTGGG+TGG + chr2_2:5710267-5710286 Msa0233370:intron 45.0%
CGTGACAAGAATGGTTTCCA+TGG + chr2_2:5710606-5710625 Msa0233370:CDS 45.0%
TGTGAAGGTCACTTCCTATG+AGG + chr2_2:5710638-5710657 Msa0233370:CDS 45.0%
AGAAGCCCTTAGGACAATGA+AGG + chr2_2:5710662-5710681 Msa0233370:CDS 45.0%
TTCTACAAGCACCATCTGTC+CGG + chr2_2:5710737-5710756 Msa0233370:CDS 45.0%
GTATCTTCAGTGAACTGGAC+AGG - chr2_2:5710798-5710817 None:intergenic 45.0%
GGCCACAAGTGACATTGTAT+TGG - chr2_2:5710889-5710908 None:intergenic 45.0%
TTCGGACAGATTTATGGCTG+TGG + chr2_2:5710944-5710963 Msa0233370:CDS 45.0%
AATTTGAAGAAGGGAGGGAC+AGG + chr2_2:5711017-5711036 Msa0233370:CDS 45.0%
AAGCATTTGGGAAGTGGTTC+TGG + chr2_2:5711080-5711099 Msa0233370:CDS 45.0%
!! TTTGGGAAGTGGTTCTGGTT+TGG + chr2_2:5711085-5711104 Msa0233370:CDS 45.0%
!! TTGGGAAGTGGTTCTGGTTT+GGG + chr2_2:5711086-5711105 Msa0233370:CDS 45.0%
GCTGATGACCATGTGAACAT+TGG + chr2_2:5711399-5711418 Msa0233370:three_prime_UTR 45.0%
TAACGGGACCAATGTTCACA+TGG - chr2_2:5711410-5711429 None:intergenic 45.0%
!! ATAATATAATATATTAGTAA+CGG - chr2_2:5711427-5711446 None:intergenic 5.0%
CAAAACCAAGCCATCCTCTG+TGG + chr2_2:5707027-5707046 Msa0233370:five_prime_UTR 50.0%
ACTCGGTTATGGAACGCAGA+AGG + chr2_2:5707221-5707240 Msa0233370:CDS 50.0%
GTTATGGAACGCAGAAGGAG+AGG + chr2_2:5707226-5707245 Msa0233370:CDS 50.0%
!! CAGAGGGAACAAGCATCGAA+GGG - chr2_2:5707273-5707292 None:intergenic 50.0%
!! ACAGAGGGAACAAGCATCGA+AGG - chr2_2:5707274-5707293 None:intergenic 50.0%
TGCTTAGGGTCTGTTTGGGT+TGG - chr2_2:5707807-5707826 None:intergenic 50.0%
CTGGGTGGAGAAACTATTGG+AGG - chr2_2:5708058-5708077 None:intergenic 50.0%
ATCTGTGCCAGTCTATCCGT+TGG + chr2_2:5708114-5708133 Msa0233370:intron 50.0%
GAATTGGAAAAGCTGGCAGC+AGG + chr2_2:5708199-5708218 Msa0233370:intron 50.0%
! CTCAAATAGTGCTGGGCTGT+TGG + chr2_2:5708609-5708628 Msa0233370:intron 50.0%
!! GGATTGGCCATTTCAACACG+TGG + chr2_2:5708712-5708731 Msa0233370:intron 50.0%
TTGGCCATTTCAACACGTGG+TGG + chr2_2:5708715-5708734 Msa0233370:intron 50.0%
! TTCAACACGTGGTGGCTTTG+GGG + chr2_2:5708723-5708742 Msa0233370:intron 50.0%
GTGACACCATCAACCACATG+TGG + chr2_2:5708805-5708824 Msa0233370:intron 50.0%
GCTAACCCACATGTGGTTGA+TGG - chr2_2:5708814-5708833 None:intergenic 50.0%
ACTGGATGCTAACCCACATG+TGG - chr2_2:5708821-5708840 None:intergenic 50.0%
!! ACATGTGGGTTAGCATCCAG+TGG + chr2_2:5708820-5708839 Msa0233370:intron 50.0%
!! CATGTGGGTTAGCATCCAGT+GGG + chr2_2:5708821-5708840 Msa0233370:intron 50.0%
TGGTCAACCCACCTTTGGTT+TGG + chr2_2:5708848-5708867 Msa0233370:intron 50.0%
GCAGTGATCCAAACCAAAGG+TGG - chr2_2:5708859-5708878 None:intergenic 50.0%
CTTTGTCAAGGATCGCAGAC+AGG - chr2_2:5708928-5708947 None:intergenic 50.0%
TTCCTTCTTAGGGACAGTGG+TGG + chr2_2:5709169-5709188 Msa0233370:intron 50.0%
ACTGATGCAGTCTGGCTATG+GGG - chr2_2:5709373-5709392 None:intergenic 50.0%
CTGTTTGCAGCGAAAAGAGG+TGG - chr2_2:5709584-5709603 None:intergenic 50.0%
GGTATGAGAGAAGTCAGGAG+CGG + chr2_2:5709837-5709856 Msa0233370:intron 50.0%
!! AGGGGCACTTCTAACTTTCG+AGG + chr2_2:5709865-5709884 Msa0233370:intron 50.0%
AGTGCAGCCGAACTTTGTCA+AGG + chr2_2:5709974-5709993 Msa0233370:intron 50.0%
TGGTCAATCCACTTGTGGTC+TGG + chr2_2:5710099-5710118 Msa0233370:intron 50.0%
!!! GGGAGGTTTTTGGTTCATGG+TGG + chr2_2:5710228-5710247 Msa0233370:intron 50.0%
CCTAAGGGCTTCTTCCTCAT+AGG - chr2_2:5710655-5710674 None:intergenic 50.0%
CCTATGAGGAAGAAGCCCTT+AGG + chr2_2:5710652-5710671 Msa0233370:CDS 50.0%
GAAGCTTCTGGTGTAGCAGA+AGG - chr2_2:5710699-5710718 None:intergenic 50.0%
GGACAGATGGTGCTTGTAGA+AGG - chr2_2:5710738-5710757 None:intergenic 50.0%
!! GTGAGAGTGGTTTTGCAGCT+AGG - chr2_2:5710867-5710886 None:intergenic 50.0%
TTGTGGCCCTCAGTTCATGT+GGG + chr2_2:5710901-5710920 Msa0233370:CDS 50.0%
GACATGCCCACATGAACTGA+GGG - chr2_2:5710910-5710929 None:intergenic 50.0%
AGACATGCCCACATGAACTG+AGG - chr2_2:5710911-5710930 None:intergenic 50.0%
!! TGGGAAGTGGTTCTGGTTTG+GGG + chr2_2:5711087-5711106 Msa0233370:CDS 50.0%
AACCAAGCCATCCTCTGTGG+CGG + chr2_2:5707030-5707049 Msa0233370:five_prime_UTR 55.0%
TGGAACGCAGAAGGAGAGGT+TGG + chr2_2:5707230-5707249 Msa0233370:CDS 55.0%
GGAACGCAGAAGGAGAGGTT+GGG + chr2_2:5707231-5707250 Msa0233370:CDS 55.0%
GAACGCAGAAGGAGAGGTTG+GGG + chr2_2:5707232-5707251 Msa0233370:CDS 55.0%
TGGAGCTCCAACGGATAGAC+TGG - chr2_2:5708124-5708143 None:intergenic 55.0%
!! TCAACACGTGGTGGCTTTGG+GGG + chr2_2:5708724-5708743 Msa0233370:intron 55.0%
GTTAGCATCCAGTGGGAGCA+TGG + chr2_2:5708828-5708847 Msa0233370:intron 55.0%
GAGCATGGTCAACCCACCTT+TGG + chr2_2:5708843-5708862 Msa0233370:intron 55.0%
! GGAAACATGGTCTAGAGCCC+TGG - chr2_2:5709009-5709028 None:intergenic 55.0%
CTCCACCACTGTCCCTAAGA+AGG - chr2_2:5709174-5709193 None:intergenic 55.0%
! CAGTCTGGCTATGGGGCATT+CGG - chr2_2:5709366-5709385 None:intergenic 55.0%
AGAAGTCAGGAGCGGAGTAG+AGG + chr2_2:5709845-5709864 Msa0233370:intron 55.0%
GAAGTCAGGAGCGGAGTAGA+GGG + chr2_2:5709846-5709865 Msa0233370:intron 55.0%
AAGTCAGGAGCGGAGTAGAG+GGG + chr2_2:5709847-5709866 Msa0233370:intron 55.0%
!!! CGGCTGCACTCTGTTTTTGC+AGG - chr2_2:5709964-5709983 None:intergenic 55.0%
GAGCGTGGTCAATCCACTTG+TGG + chr2_2:5710094-5710113 Msa0233370:intron 55.0%
CCTTCACACTGTTTGCCCCA+TGG - chr2_2:5710626-5710645 None:intergenic 55.0%
CCATGGGGCAAACAGTGTGA+AGG + chr2_2:5710623-5710642 Msa0233370:CDS 55.0%
ACAAGCACCATCTGTCCGGA+AGG + chr2_2:5710741-5710760 Msa0233370:CDS 55.0%
CTTGTGGCCCTCAGTTCATG+TGG + chr2_2:5710900-5710919 Msa0233370:CDS 55.0%
! AAGGGAGGGACAGGTTTTGC+TGG + chr2_2:5711026-5711045 Msa0233370:CDS 55.0%
!! AAGTGGTTCTGGTTTGGGGC+TGG + chr2_2:5711091-5711110 Msa0233370:CDS 55.0%
AACCGCCACAGAGGATGGCT+TGG - chr2_2:5707035-5707054 None:intergenic 60.0%
CGGTAAACCGCCACAGAGGA+TGG - chr2_2:5707040-5707059 None:intergenic 60.0%
GCAGAAGGAGAGGTTGGGGA+AGG + chr2_2:5707236-5707255 Msa0233370:CDS 60.0%
! TGGGTTGACCATGCTCCCAC+TGG - chr2_2:5708839-5708858 None:intergenic 60.0%
CTGGACAGAGTTGGCGCAAC+TGG - chr2_2:5709442-5709461 None:intergenic 60.0%
CACCATCTGTCCGGAAGGCA+AGG + chr2_2:5710746-5710765 Msa0233370:CDS 60.0%
CTCCTTGCCTTCCGGACAGA+TGG - chr2_2:5710751-5710770 None:intergenic 60.0%
GTCGCGGTAAACCGCCACAG+AGG - chr2_2:5707044-5707063 None:intergenic 65.0%
!! ACACGTGGTGGCTTTGGGGG+TGG + chr2_2:5708727-5708746 Msa0233370:intron 65.0%
!! CGTGGTGGCTTTGGGGGTGG+TGG + chr2_2:5708730-5708749 Msa0233370:intron 70.0%
!! GGTGGCTTTGGGGGTGGTGG+TGG + chr2_2:5708733-5708752 Msa0233370:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 5707010 5711464 5707010 ID=Msa0233370;Name=Msa0233370
chr2_2 mRNA 5707010 5711464 5707010 ID=Msa0233370-mRNA-1;Parent=Msa0233370;Name=Msa0233370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=146|1|1|1|1|1|2|328|304
chr2_2 exon 5707010 5707394 5707010 ID=Msa0233370-mRNA-1:exon:2497;Parent=Msa0233370-mRNA-1
chr2_2 exon 5710461 5711464 5710461 ID=Msa0233370-mRNA-1:exon:2498;Parent=Msa0233370-mRNA-1
chr2_2 five_prime_UTR 5707010 5707155 5707010 ID=Msa0233370-mRNA-1:five_prime_utr;Parent=Msa0233370-mRNA-1
chr2_2 CDS 5707156 5707394 5707156 ID=Msa0233370-mRNA-1:cds;Parent=Msa0233370-mRNA-1
chr2_2 CDS 5710461 5711136 5710461 ID=Msa0233370-mRNA-1:cds;Parent=Msa0233370-mRNA-1
chr2_2 three_prime_UTR 5711137 5711464 5711137 ID=Msa0233370-mRNA-1:three_prime_utr;Parent=Msa0233370-mRNA-1
Gene Sequence

>Msa0233370

ATGCCTCAGCGACATTCGAAGAACAACAACGATCTCGCGTTCTTCACCTACGATGAAAAGCGTAAACTCGGTTATGGAACGCAGAAGGAGAGGTTGGGGAAGGATTCCATCAAACCCTTCGATGCTTGTTCCCTCTGTCTCAAATCGTTAATCGATCCTATGAGCTGCCAAAAAGGTCACCTTTTCTGCAAAGAGTGCATTCTCGAATGCTTATTATCTCAGAAGAAAGACATTCAAAGGAGGCTTGTTGCACATTCTGCTCAGCAGAAGCAAGAAAAAGAAGAGGAAGAAGAAAAATTAATGTTGCAGAAGGCTAAAGAGCTTGATGCATTTGATCAGCAAAATCATGGTGCTGTACCACAATACAGTGATAGAAATTATAACCGTGACAAGAATGGTTTCCATGGGGCAAACAGTGTGAAGGTCACTTCCTATGAGGAAGAAGCCCTTAGGACAATGAAGGCATTTTGGCTGCCTTCTGCTACACCAGAAGCTTCTGTTAAAGTAGAAGCTCCTTCTACAAGCACCATCTGTCCGGAAGGCAAGGAGAATCTAAAGTTAAAGACACTTTTTCCTGTCCAGTTCACTGAAGATACTAGTGAGCAGAAGAAATCGAATGCTCTTGATCGGAGCTACATTTGTCCTAGCTGCAAAACCACTCTCACCAATACAATGTCACTTGTGGCCCTCAGTTCATGTGGGCATGTCTTTTGCAAAAAATGTTCGGACAGATTTATGGCTGTGGATAAGGTTTGTCTTGTTTGCAACAAGGCATGTAAAGAGAGACATTTGGTTAATTTGAAGAAGGGAGGGACAGGTTTTGCTGGTCATGATGATAATCTTGAAGCCAAAGATTTCAAGCATTTGGGAAGTGGTTCTGGTTTGGGGCTGGTTAGACCTGCGATGAAGACTTAA

Protein sequence

>Msa0233370

MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACSLCLKSLIDPMSCQKGHLFCKECILECLLSQKKDIQRRLVAHSAQQKQEKEEEEEKLMLQKAKELDAFDQQNHGAVPQYSDRNYNRDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEASVKVEAPSTSTICPEGKENLKLKTLFPVQFTEDTSEQKKSNALDRSYICPSCKTTLTNTMSLVALSSCGHVFCKKCSDRFMAVDKVCLVCNKACKERHLVNLKKGGTGFAGHDDNLEAKDFKHLGSGSGLGLVRPAMKT*