Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102090 | XP_039683975.1 | 99.583 | 240 | 1 | 0 | 100 | 339 | 1 | 240 | 2.76e-173 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102090 | sp|Q8VZ95|VAP11_ARATH | 66.529 | 242 | 77 | 3 | 100 | 339 | 17 | 256 | 4.09e-100 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102090 | I3SGQ9 | 99.583 | 240 | 1 | 0 | 100 | 339 | 1 | 240 | 1.32e-173 | 491 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa1102090 | -0.805158 | 1.527649e-49 | -8.615850e-47 |
| Msa0025690 | Msa1102090 | -0.801556 | 8.515528e-49 | -8.615850e-47 |
| Msa0029730 | Msa1102090 | 0.826434 | 2.718377e-54 | -8.615850e-47 |
| Msa0040420 | Msa1102090 | -0.830328 | 3.123449e-55 | -8.615850e-47 |
| Msa0050320 | Msa1102090 | -0.800585 | 1.345448e-48 | -8.615850e-47 |
| Msa0064250 | Msa1102090 | -0.809334 | 1.992118e-50 | -8.615850e-47 |
| Msa0071640 | Msa1102090 | 0.812022 | 5.224393e-51 | -8.615850e-47 |
| Msa0797010 | Msa1102090 | -0.809550 | 1.790285e-50 | -8.615850e-47 |
| Msa0154720 | Msa1102090 | -0.801151 | 1.030876e-48 | -8.615850e-47 |
| Msa0169710 | Msa1102090 | 0.824801 | 6.630117e-54 | -8.615850e-47 |
| Msa0195030 | Msa1102090 | 0.828738 | 7.609069e-55 | -8.615850e-47 |
| Msa0237180 | Msa1102090 | 0.823799 | 1.139940e-53 | -8.615850e-47 |
| Msa0389800 | Msa1102090 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa0467710 | Msa1102090 | -0.814044 | 1.882722e-51 | -8.615850e-47 |
| Msa0982260 | Msa1102090 | 0.804565 | 2.032353e-49 | -8.615850e-47 |
| Msa1076200 | Msa1102090 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
| Msa1078480 | Msa1102090 | 0.831274 | 1.831417e-55 | -8.615850e-47 |
| Msa1078640 | Msa1102090 | 0.831919 | 1.270271e-55 | -8.615850e-47 |
| Msa1102090 | Msa1182400 | -0.810291 | 1.240296e-50 | -8.615850e-47 |
| Msa1102090 | Msa1327690 | -0.806614 | 7.551130e-50 | -8.615850e-47 |
| Msa1102090 | Msa1363560 | -0.813212 | 2.868860e-51 | -8.615850e-47 |
| Msa0274940 | Msa1102090 | 0.838402 | 2.938543e-57 | -8.615850e-47 |
| Msa0315660 | Msa1102090 | 0.827182 | 1.801437e-54 | -8.615850e-47 |
| Msa0883700 | Msa1102090 | -0.812639 | 3.831818e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102090 | MtrunA17_Chr7g0230901 | 99.583 | 240 | 1 | 0 | 100 | 339 | 1 | 240 | 2.53e-177 | 491 |
| Msa1102090 | MtrunA17_Chr4g0012521 | 73.859 | 241 | 61 | 2 | 100 | 339 | 1 | 240 | 2.02e-130 | 372 |
| Msa1102090 | MtrunA17_Chr5g0399141 | 64.315 | 241 | 85 | 1 | 100 | 339 | 3 | 243 | 5.47e-110 | 320 |
| Msa1102090 | MtrunA17_Chr4g0056231 | 66.807 | 238 | 78 | 1 | 103 | 339 | 5 | 242 | 2.14e-106 | 311 |
| Msa1102090 | MtrunA17_Chr4g0012141 | 50.980 | 204 | 67 | 3 | 106 | 308 | 19 | 190 | 2.38e-62 | 197 |
| Msa1102090 | MtrunA17_Chr4g0012151 | 51.961 | 204 | 86 | 3 | 106 | 306 | 25 | 219 | 1.14e-59 | 191 |
| Msa1102090 | MtrunA17_Chr5g0399741 | 43.750 | 224 | 97 | 4 | 100 | 322 | 1 | 196 | 2.48e-54 | 177 |
| Msa1102090 | MtrunA17_Chr4g0012291 | 48.500 | 200 | 85 | 4 | 106 | 304 | 24 | 206 | 1.92e-52 | 173 |
| Msa1102090 | MtrunA17_Chr4g0066671 | 60.000 | 130 | 52 | 0 | 102 | 231 | 2 | 131 | 1.15e-49 | 168 |
| Msa1102090 | MtrunA17_Chr4g0055631 | 39.189 | 222 | 106 | 3 | 105 | 325 | 9 | 202 | 5.68e-48 | 161 |
| Msa1102090 | MtrunA17_Chr4g0012091 | 50.000 | 194 | 69 | 4 | 118 | 308 | 5 | 173 | 4.31e-45 | 152 |
| Msa1102090 | MtrunA17_Chr1g0191261 | 50.370 | 135 | 67 | 0 | 100 | 234 | 1 | 135 | 1.00e-39 | 145 |
| Msa1102090 | MtrunA17_Chr4g0012341 | 57.377 | 61 | 23 | 2 | 137 | 194 | 2 | 62 | 9.85e-15 | 68.2 |
| Msa1102090 | MtrunA17_Chr4g0012381 | 71.053 | 38 | 11 | 0 | 129 | 166 | 1 | 38 | 9.54e-13 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1102090 | AT3G60600.1 | 66.529 | 242 | 77 | 3 | 100 | 339 | 17 | 256 | 4.15e-101 | 298 |
| Msa1102090 | AT2G45140.1 | 67.500 | 240 | 74 | 3 | 102 | 339 | 2 | 239 | 2.00e-100 | 296 |
| Msa1102090 | AT2G45140.2 | 65.833 | 240 | 61 | 4 | 102 | 339 | 2 | 222 | 1.77e-95 | 283 |
| Msa1102090 | AT3G60600.3 | 74.854 | 171 | 40 | 2 | 100 | 269 | 17 | 185 | 7.96e-86 | 258 |
| Msa1102090 | AT3G60600.2 | 72.067 | 179 | 47 | 2 | 100 | 277 | 17 | 193 | 1.57e-84 | 254 |
| Msa1102090 | AT4G00170.1 | 56.612 | 242 | 98 | 5 | 100 | 338 | 1 | 238 | 1.09e-83 | 253 |
| Msa1102090 | AT4G00170.2 | 54.419 | 215 | 91 | 5 | 127 | 338 | 1 | 211 | 6.87e-67 | 209 |
| Msa1102090 | AT1G51270.5 | 64.103 | 156 | 55 | 1 | 100 | 254 | 1 | 156 | 1.08e-63 | 206 |
| Msa1102090 | AT1G51270.13 | 63.636 | 154 | 55 | 1 | 102 | 254 | 2 | 155 | 1.82e-63 | 206 |
| Msa1102090 | AT1G51270.12 | 63.636 | 154 | 55 | 1 | 102 | 254 | 2 | 155 | 1.82e-63 | 206 |
| Msa1102090 | AT1G51270.14 | 63.636 | 154 | 55 | 1 | 102 | 254 | 2 | 155 | 1.82e-63 | 206 |
| Msa1102090 | AT1G51270.11 | 63.636 | 154 | 55 | 1 | 102 | 254 | 2 | 155 | 1.82e-63 | 206 |
| Msa1102090 | AT1G51270.15 | 63.636 | 154 | 55 | 1 | 102 | 254 | 2 | 155 | 2.07e-62 | 206 |
| Msa1102090 | AT5G47180.1 | 43.460 | 237 | 102 | 3 | 105 | 339 | 9 | 215 | 2.25e-61 | 196 |
| Msa1102090 | AT5G47180.2 | 43.460 | 237 | 102 | 3 | 105 | 339 | 9 | 215 | 2.25e-61 | 196 |
| Msa1102090 | AT1G51270.8 | 63.636 | 154 | 55 | 1 | 102 | 254 | 173 | 326 | 2.74e-61 | 204 |
| Msa1102090 | AT1G51270.8 | 59.615 | 156 | 62 | 1 | 100 | 254 | 1 | 156 | 4.80e-57 | 193 |
| Msa1102090 | AT1G51270.2 | 63.636 | 154 | 55 | 1 | 102 | 254 | 173 | 326 | 2.74e-61 | 204 |
| Msa1102090 | AT1G51270.2 | 59.615 | 156 | 62 | 1 | 100 | 254 | 1 | 156 | 4.80e-57 | 193 |
| Msa1102090 | AT1G51270.1 | 64.474 | 152 | 53 | 1 | 104 | 254 | 175 | 326 | 6.20e-61 | 204 |
| Msa1102090 | AT1G51270.1 | 59.615 | 156 | 62 | 1 | 100 | 254 | 1 | 156 | 9.30e-57 | 193 |
| Msa1102090 | AT1G51270.9 | 63.636 | 154 | 55 | 1 | 102 | 254 | 125 | 278 | 6.31e-61 | 205 |
| Msa1102090 | AT1G51270.9 | 58.879 | 107 | 43 | 1 | 149 | 254 | 2 | 108 | 2.88e-35 | 135 |
| Msa1102090 | AT1G51270.6 | 63.636 | 154 | 55 | 1 | 102 | 254 | 125 | 278 | 6.31e-61 | 205 |
| Msa1102090 | AT1G51270.6 | 58.879 | 107 | 43 | 1 | 149 | 254 | 2 | 108 | 2.88e-35 | 135 |
| Msa1102090 | AT1G51270.7 | 63.636 | 154 | 55 | 1 | 102 | 254 | 125 | 278 | 6.31e-61 | 205 |
| Msa1102090 | AT1G51270.7 | 58.879 | 107 | 43 | 1 | 149 | 254 | 2 | 108 | 2.88e-35 | 135 |
| Msa1102090 | AT1G51270.10 | 63.636 | 154 | 55 | 1 | 102 | 254 | 125 | 278 | 6.31e-61 | 205 |
| Msa1102090 | AT1G51270.10 | 58.879 | 107 | 43 | 1 | 149 | 254 | 2 | 108 | 2.88e-35 | 135 |
| Msa1102090 | AT1G51270.3 | 63.636 | 154 | 55 | 1 | 102 | 254 | 173 | 326 | 1.72e-60 | 205 |
| Msa1102090 | AT1G51270.3 | 59.615 | 156 | 62 | 1 | 100 | 254 | 1 | 156 | 2.44e-56 | 194 |
| Msa1102090 | AT2G23830.1 | 69.841 | 126 | 38 | 0 | 100 | 225 | 1 | 126 | 3.32e-58 | 185 |
| Msa1102090 | AT1G08820.1 | 61.364 | 132 | 49 | 1 | 105 | 234 | 5 | 136 | 8.66e-46 | 160 |
| Msa1102090 | AT1G08820.5 | 61.364 | 132 | 49 | 1 | 105 | 234 | 5 | 136 | 8.66e-46 | 160 |
| Msa1102090 | AT1G08820.3 | 61.364 | 132 | 49 | 1 | 105 | 234 | 5 | 136 | 8.66e-46 | 160 |
| Msa1102090 | AT1G08820.4 | 61.364 | 132 | 49 | 1 | 105 | 234 | 5 | 136 | 8.66e-46 | 160 |
| Msa1102090 | AT1G08820.2 | 61.364 | 132 | 49 | 1 | 105 | 234 | 5 | 136 | 8.66e-46 | 160 |
| Msa1102090 | AT1G51270.4 | 61.628 | 86 | 32 | 1 | 170 | 254 | 1 | 86 | 3.59e-28 | 113 |
Find 101 sgRNAs with CRISPR-Local
Find 608 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAATATATTTCCTGAATT+TGG | 0.116884 | 7_3:+34055571 | None:intergenic |
| AAACTGCTTATTTGTATTAT+TGG | 0.123239 | 7_3:-34055691 | Msa1102090:three_prime_UTR |
| TGCTGTGATTGGCTTCATTT+TGG | 0.196776 | 7_3:-34055784 | Msa1102090:CDS |
| TATTGAATAAATACCATTTC+GGG | 0.225698 | 7_3:+34062016 | None:intergenic |
| TAATTTGAGTTGCCAAATTC+AGG | 0.272562 | 7_3:-34055583 | Msa1102090:three_prime_UTR |
| GTTGTTCTTGTTGCTGTGAT+TGG | 0.299443 | 7_3:-34055795 | Msa1102090:CDS |
| TTATTGAATAAATACCATTT+CGG | 0.322517 | 7_3:+34062015 | None:intergenic |
| CGACAACTATGTTGCTTTCA+AGG | 0.332695 | 7_3:-34062996 | Msa1102090:intron |
| TGATGAGAATGCTGTCATTA+TGG | 0.368575 | 7_3:-34064639 | Msa1102090:CDS |
| GGCCTAACACAATACTTCTT+CGG | 0.389754 | 7_3:+34062275 | None:intergenic |
| TAACGAGCGGGATGAACATC+AGG | 0.395853 | 7_3:-34061631 | Msa1102090:CDS |
| TGCTTATTTGTATTATTGGC+TGG | 0.401739 | 7_3:-34055687 | Msa1102090:three_prime_UTR |
| CAAGGAAACTGTAGTTCATC+AGG | 0.411632 | 7_3:+34063166 | None:intergenic |
| CATAACATACCACTTCTTGC+TGG | 0.418065 | 7_3:+34060731 | None:intergenic |
| CGAAGACGTTGTGTCAGTTT+CGG | 0.432310 | 7_3:+34064452 | None:intergenic |
| CTTGCTGGAGTCTTCTCTGT+TGG | 0.432618 | 7_3:+34060746 | None:intergenic |
| GTTGTTTATGTTGCTCCTCC+CGG | 0.438063 | 7_3:-34061859 | Msa1102090:CDS |
| AGGTCTACATGTGATGTAAC+AGG | 0.440620 | 7_3:-34062230 | Msa1102090:intron |
| TCCTCCCGGACCTCCGTCTC+CGG | 0.441606 | 7_3:-34061845 | Msa1102090:CDS |
| AGTAACAATGCAAGCGCAAA+AGG | 0.445405 | 7_3:-34062125 | Msa1102090:CDS |
| CATCATCACAATTAAGATGC+AGG | 0.446166 | 7_3:+34064568 | None:intergenic |
| TCGAACCGGAGACGGAGGTC+CGG | 0.447490 | 7_3:+34061840 | None:intergenic |
| AAAAGATATTAATCCCGAAA+TGG | 0.453079 | 7_3:-34062029 | Msa1102090:intron |
| TTCCCTCCTCAGAATATCCT+CGG | 0.460427 | 7_3:-34064503 | Msa1102090:CDS |
| CGAGTTTCCCTCGTTGGTAA+CGG | 0.462398 | 7_3:-34063254 | Msa1102090:CDS |
| TCATCAGATCCTTCTCGAAC+CGG | 0.462936 | 7_3:+34061826 | None:intergenic |
| AAACACATTACCTCAAATGT+AGG | 0.465791 | 7_3:+34061606 | None:intergenic |
| CGAACCGGAGACGGAGGTCC+GGG | 0.472106 | 7_3:+34061841 | None:intergenic |
| GACTTGCAATCACACTTTGA+AGG | 0.474094 | 7_3:+34062065 | None:intergenic |
| TCCCTCCTCAGAATATCCTC+GGG | 0.476669 | 7_3:-34064502 | Msa1102090:CDS |
| CGGGGCTTACTCTTGCTTCG+TGG | 0.480028 | 7_3:-34064483 | Msa1102090:CDS |
| CACCACGGCTTCTACTGACT+TGG | 0.481552 | 7_3:+34055835 | None:intergenic |
| ATCCGAAGAAGTATTGTGTT+AGG | 0.483630 | 7_3:-34062277 | Msa1102090:CDS |
| CTTGAAAGCAACATAGTTGT+CGG | 0.493846 | 7_3:+34062997 | None:intergenic |
| CCTGATTCTGTATCGGAAAA+CGG | 0.493968 | 7_3:-34061793 | Msa1102090:CDS |
| CAAAGTGTGATTGCAAGTCC+TGG | 0.494129 | 7_3:-34062061 | Msa1102090:CDS |
| TGTTTGAATTAGTTGAATTG+AGG | 0.507183 | 7_3:-34063057 | Msa1102090:intron |
| GATCCTTCTCGAACCGGAGA+CGG | 0.509850 | 7_3:+34061832 | None:intergenic |
| CGTTACCAACGAGGGAAACT+CGG | 0.515231 | 7_3:+34063255 | None:intergenic |
| TCTCTCCGAGTTTCCCTCGT+TGG | 0.516515 | 7_3:-34063260 | Msa1102090:CDS |
| TGAAAAGTTCAATCTTTGAT+CGG | 0.517987 | 7_3:-34055499 | Msa1102090:three_prime_UTR |
| ATTTGGCAACTCAAATTACA+AGG | 0.525426 | 7_3:+34055588 | None:intergenic |
| GAGAAGGTCGCCGGTACTCA+TGG | 0.525999 | 7_3:+34063198 | None:intergenic |
| CATCTTAATTGTGATGATGA+AGG | 0.536574 | 7_3:-34064564 | Msa1102090:CDS |
| ATCATCACAATTAAGATGCA+GGG | 0.543080 | 7_3:+34064569 | None:intergenic |
| ATACGATCGTGGCGACGAGA+TGG | 0.544010 | 7_3:-34064537 | Msa1102090:CDS |
| GACATCAGCTCAAGTTTCAA+AGG | 0.547045 | 7_3:-34060797 | Msa1102090:CDS |
| ATGCAGTTTAGCAAAGAGGC+AGG | 0.550210 | 7_3:-34061910 | Msa1102090:intron |
| TCTTCGATGATTGCGACGGT+GGG | 0.555138 | 7_3:-34064601 | Msa1102090:CDS |
| TTTGCACACAGGAGCTCTTG+AGG | 0.555842 | 7_3:-34055860 | Msa1102090:intron |
| TCCTTGCATTGCATGTCAGA+AGG | 0.556873 | 7_3:+34062097 | None:intergenic |
| TCGCCGGTACTCATGGTTGG+TGG | 0.558440 | 7_3:+34063205 | None:intergenic |
| TTCTTCGCCTGATTCTGTAT+CGG | 0.560298 | 7_3:-34061800 | Msa1102090:CDS |
| TGTTGAAGAGTGCAAGTTGA+GGG | 0.561344 | 7_3:-34061881 | Msa1102090:CDS |
| ATTGTGTTAGGCCTAACAGT+GGG | 0.564035 | 7_3:-34062265 | Msa1102090:CDS |
| ACCTTCTGACATGCAATGCA+AGG | 0.566905 | 7_3:-34062098 | Msa1102090:CDS |
| GTCTTCGATGATTGCGACGG+TGG | 0.574403 | 7_3:-34064602 | Msa1102090:CDS |
| GGCAACACAACCCCACTGTT+AGG | 0.576557 | 7_3:+34062254 | None:intergenic |
| ACTCATGGTTGGTGGATCGC+CGG | 0.580277 | 7_3:+34063213 | None:intergenic |
| CCTCCGTCTCCGGTTCGAGA+AGG | 0.584125 | 7_3:-34061835 | Msa1102090:CDS |
| CATCAGGTTGAATGTTGAGA+AGG | 0.585329 | 7_3:+34063182 | None:intergenic |
| TTGCATGCAGTTTAGCAAAG+AGG | 0.586615 | 7_3:-34061914 | Msa1102090:intron |
| ACATCAGGGTCCTACATTTG+AGG | 0.587034 | 7_3:-34061616 | Msa1102090:intron |
| GAGAAGACTCCAGCAAGAAG+TGG | 0.590482 | 7_3:-34060740 | Msa1102090:intron |
| CGATGATTGCGACGGTGGGG+AGG | 0.594978 | 7_3:-34064597 | Msa1102090:CDS |
| ATGTTGAAGAGTGCAAGTTG+AGG | 0.601391 | 7_3:-34061882 | Msa1102090:CDS |
| GTTGGTGGATCGCCGGAGAG+AGG | 0.602937 | 7_3:+34063220 | None:intergenic |
| AATGACAGCATTCTCATCAC+AGG | 0.604159 | 7_3:+34064643 | None:intergenic |
| TTGAATGTTGAGAAGGTCGC+CGG | 0.604580 | 7_3:+34063189 | None:intergenic |
| ACTTGCACTCTTCAACATTG+TGG | 0.605253 | 7_3:+34061887 | None:intergenic |
| CCCCGAGGATATTCTGAGGA+GGG | 0.605815 | 7_3:+34064501 | None:intergenic |
| GATCCACCAACCATGAGTAC+CGG | 0.615457 | 7_3:-34063208 | Msa1102090:CDS |
| AGGTCGCCGGTACTCATGGT+TGG | 0.621597 | 7_3:+34063202 | None:intergenic |
| AACAATGCAAGCGCAAAAGG+AGG | 0.624850 | 7_3:-34062122 | Msa1102090:CDS |
| CTTCGATGATTGCGACGGTG+GGG | 0.628865 | 7_3:-34064600 | Msa1102090:CDS |
| AAGGTCATGTCCTCTTCAAG+AGG | 0.632748 | 7_3:+34055757 | None:intergenic |
| GCGATCTCCGTTACCAACGA+GGG | 0.638891 | 7_3:+34063247 | None:intergenic |
| GATAGCAGAATTCCTCTCCT+CGG | 0.641716 | 7_3:+34060771 | None:intergenic |
| AACGAGGGAAACTCGGAGAG+AGG | 0.641931 | 7_3:+34063262 | None:intergenic |
| GCCCCGAGGATATTCTGAGG+AGG | 0.643373 | 7_3:+34064500 | None:intergenic |
| CCTTCTCGAACCGGAGACGG+AGG | 0.644654 | 7_3:+34061835 | None:intergenic |
| GGTTCGAGAAGGATCTGATG+AGG | 0.644856 | 7_3:-34061824 | Msa1102090:CDS |
| TTTCAAAGGTGACCGAGGAG+AGG | 0.648487 | 7_3:-34060783 | Msa1102090:CDS |
| AGCGATCTCCGTTACCAACG+AGG | 0.654070 | 7_3:+34063246 | None:intergenic |
| TAAGCCCCGAGGATATTCTG+AGG | 0.660588 | 7_3:+34064497 | None:intergenic |
| TGTGTCTTCGATGATTGCGA+CGG | 0.663345 | 7_3:-34064605 | Msa1102090:CDS |
| CAGCATTCTCATCACAGGTG+TGG | 0.667616 | 7_3:+34064648 | None:intergenic |
| ACCGGAGACGGAGGTCCGGG+AGG | 0.668319 | 7_3:+34061844 | None:intergenic |
| ACAGTGGGGTTGTGTTGCCG+AGG | 0.668763 | 7_3:-34062250 | Msa1102090:CDS |
| AACGAGCGGGATGAACATCA+GGG | 0.673107 | 7_3:-34061630 | Msa1102090:CDS |
| TCAAGTTTCAAAGGTGACCG+AGG | 0.674187 | 7_3:-34060788 | Msa1102090:CDS |
| ATGAAGGCTCTATACGATCG+TGG | 0.677994 | 7_3:-34064548 | Msa1102090:CDS |
| GTTACATCACATGTAGACCT+CGG | 0.680745 | 7_3:+34062233 | None:intergenic |
| TCGCAATCATCGAAGACACA+AGG | 0.683747 | 7_3:+34064608 | None:intergenic |
| CAAGTCAGTAGAAGCCGTGG+TGG | 0.689335 | 7_3:-34055834 | Msa1102090:CDS |
| TTGTGTTAGGCCTAACAGTG+GGG | 0.689656 | 7_3:-34062264 | Msa1102090:CDS |
| CCCTCCTCAGAATATCCTCG+GGG | 0.695441 | 7_3:-34064501 | Msa1102090:CDS |
| TATTGTGTTAGGCCTAACAG+TGG | 0.717537 | 7_3:-34062266 | Msa1102090:CDS |
| ACTAAAATGATGTGAATGAG+CGG | 0.717811 | 7_3:-34055717 | Msa1102090:three_prime_UTR |
| ATGTAAGTGATATTCCACCA+CGG | 0.769410 | 7_3:+34055820 | None:intergenic |
| CGAAGCAAGAGTAAGCCCCG+AGG | 0.793581 | 7_3:+34064486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATATTTATTCACAA+AGG | - | chr7_3:34057542-34057561 | Msa1102090:intron | 10.0% |
| !! | TAAATATATTTATTCACAAA+GGG | - | chr7_3:34057543-34057562 | Msa1102090:intron | 10.0% |
| !!! | ATTTTATTATGTGTTAAATA+TGG | - | chr7_3:34059526-34059545 | Msa1102090:intron | 10.0% |
| !! | ATTCAATATTTAAATTGTTA+TGG | - | chr7_3:34059666-34059685 | Msa1102090:intron | 10.0% |
| !!! | TTTCTTTTTTTTTTTTTTGA+GGG | - | chr7_3:34059910-34059929 | Msa1102090:intron | 10.0% |
| !!! | TTTTTTAATCTTAAACAAAA+GGG | + | chr7_3:34064059-34064078 | None:intergenic | 10.0% |
| !!! | TATGAATTTTTAAAACATAT+TGG | - | chr7_3:34064144-34064163 | Msa1102090:intron | 10.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr7_3:34056610-34056629 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_3:34056713-34056732 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr7_3:34056737-34056756 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr7_3:34056736-34056755 | Msa1102090:intron | 15.0% |
| !! | ACAAATTGATAGATTAATAA+GGG | + | chr7_3:34057500-34057519 | None:intergenic | 15.0% |
| !!! | TATTTTTCTGTTCTAAATTA+AGG | + | chr7_3:34057693-34057712 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTCTTTTTGTAAT+TGG | - | chr7_3:34057797-34057816 | Msa1102090:intron | 15.0% |
| !! | TTATTGAATAAATACCATTT+CGG | + | chr7_3:34058124-34058143 | None:intergenic | 15.0% |
| !!! | ATAAAGATAATATTTGTTGA+TGG | - | chr7_3:34058144-34058163 | Msa1102090:intron | 15.0% |
| !!! | TTTCAAGTTTTTATTAGTTA+AGG | - | chr7_3:34058931-34058950 | Msa1102090:intron | 15.0% |
| !!! | AGAAAAAAATGTTCTTATTT+TGG | - | chr7_3:34059301-34059320 | Msa1102090:intron | 15.0% |
| !! | ACAATTTAAATATTGAATCT+AGG | + | chr7_3:34059664-34059683 | None:intergenic | 15.0% |
| !!! | CTTTCTTTTTTTTTTTTTTG+AGG | - | chr7_3:34059909-34059928 | Msa1102090:intron | 15.0% |
| !!! | ATCTTATTTAACCTTTTATT+TGG | - | chr7_3:34059987-34060006 | Msa1102090:intron | 15.0% |
| !! | TTAAAAGACATATACAAAAA+GGG | + | chr7_3:34060046-34060065 | None:intergenic | 15.0% |
| !! | ATTAAAAGACATATACAAAA+AGG | + | chr7_3:34060047-34060066 | None:intergenic | 15.0% |
| !! | ATTTAAACTTTCATAATTCT+TGG | - | chr7_3:34060287-34060306 | Msa1102090:intron | 15.0% |
| !! | TTCTATTATAAATACAAACT+AGG | - | chr7_3:34061652-34061671 | Msa1102090:intron | 15.0% |
| !! | TTCTATTATAAATACAAACA+AGG | + | chr7_3:34061740-34061759 | None:intergenic | 15.0% |
| !! | TAGAATCAATTACAAATTAA+CGG | - | chr7_3:34061761-34061780 | Msa1102090:intron | 15.0% |
| !! | CTATTATAATAAATCAAACA+AGG | + | chr7_3:34061945-34061964 | None:intergenic | 15.0% |
| !!! | AAACAAATTGAGAATTTTTA+TGG | - | chr7_3:34062827-34062846 | Msa1102090:intron | 15.0% |
| !!! | TTTTTAATCTTAAACAAAAG+GGG | + | chr7_3:34064058-34064077 | None:intergenic | 15.0% |
| !!! | CTTTTTTAATCTTAAACAAA+AGG | + | chr7_3:34064060-34064079 | None:intergenic | 15.0% |
| !! | TTTAGAAATTGACATATATT+AGG | - | chr7_3:34064101-34064120 | Msa1102090:intron | 15.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_3:34056650-34056669 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr7_3:34056727-34056746 | Msa1102090:intron | 20.0% |
| !! | CAAATTGATAGATTAATAAG+GGG | + | chr7_3:34057499-34057518 | None:intergenic | 20.0% |
| !! | GACAAATTGATAGATTAATA+AGG | + | chr7_3:34057501-34057520 | None:intergenic | 20.0% |
| !! | ATTAATCTATCAATTTGTCT+TGG | - | chr7_3:34057502-34057521 | Msa1102090:intron | 20.0% |
| !!! | TGTTTTTAAAGCTGAATTAA+GGG | + | chr7_3:34057667-34057686 | None:intergenic | 20.0% |
| !!! | TTGTTTTTAAAGCTGAATTA+AGG | + | chr7_3:34057668-34057687 | None:intergenic | 20.0% |
| !! | TATTGAATAAATACCATTTC+GGG | + | chr7_3:34058123-34058142 | None:intergenic | 20.0% |
| !!! | TCTCTACATTGTTTTTTTTT+TGG | - | chr7_3:34058435-34058454 | Msa1102090:intron | 20.0% |
| !!! | CTCTACATTGTTTTTTTTTT+GGG | - | chr7_3:34058436-34058455 | Msa1102090:intron | 20.0% |
| !!! | GCAAAAAGAATTTTTTATCA+AGG | + | chr7_3:34058786-34058805 | None:intergenic | 20.0% |
| !! | CTAATAAAAACTTGAAAGAA+GGG | + | chr7_3:34058928-34058947 | None:intergenic | 20.0% |
| !! | ACTAATAAAAACTTGAAAGA+AGG | + | chr7_3:34058929-34058948 | None:intergenic | 20.0% |
| !! | AGTAAATAAGATAATTCCAA+AGG | + | chr7_3:34059271-34059290 | None:intergenic | 20.0% |
| !! | ATAACTAGCTATAAATTTGT+TGG | + | chr7_3:34059458-34059477 | None:intergenic | 20.0% |
| !!! | AATTGTATTTTGATAGAAAC+TGG | - | chr7_3:34059722-34059741 | Msa1102090:intron | 20.0% |
| !! | GATCAAAATATTGAAATGAA+TGG | - | chr7_3:34059744-34059763 | Msa1102090:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGAGGGA+AGG | - | chr7_3:34059914-34059933 | Msa1102090:intron | 20.0% |
| !! | TGAAAAAAATGCCAAATAAA+AGG | + | chr7_3:34060001-34060020 | None:intergenic | 20.0% |
| !! | AAAATAAGGGTGATTTATAA+AGG | - | chr7_3:34060223-34060242 | Msa1102090:intron | 20.0% |
| !!! | TAATTCTTGTTTGACATTAA+TGG | + | chr7_3:34060458-34060477 | None:intergenic | 20.0% |
| !! | AATATAGAAATAAGGATGAA+GGG | + | chr7_3:34060638-34060657 | None:intergenic | 20.0% |
| !! | AAATATAGAAATAAGGATGA+AGG | + | chr7_3:34060639-34060658 | None:intergenic | 20.0% |
| !! | TTCTATTATAAGTACAAACA+AGG | - | chr7_3:34061869-34061888 | Msa1102090:CDS | 20.0% |
| !! | CAATTAGAAATCAAATGTTA+TGG | + | chr7_3:34062273-34062292 | None:intergenic | 20.0% |
| !!! | ACATTTTAACCCAAAATTAA+TGG | + | chr7_3:34062709-34062728 | None:intergenic | 20.0% |
| !! | AAACATATTGTCAACTTAAT+TGG | - | chr7_3:34062879-34062898 | Msa1102090:intron | 20.0% |
| !! | TTGATGAAATCAAAGAAAAA+AGG | + | chr7_3:34064032-34064051 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTGATTTCATCA+AGG | - | chr7_3:34064031-34064050 | Msa1102090:intron | 20.0% |
| !!! | TTTTTCTTTGATTTCATCAA+GGG | - | chr7_3:34064032-34064051 | Msa1102090:intron | 20.0% |
| !! | AAACTGCTTATTTGTATTAT+TGG | - | chr7_3:34064445-34064464 | Msa1102090:intron | 20.0% |
| !! | CTAAATATATTTCCTGAATT+TGG | + | chr7_3:34064568-34064587 | None:intergenic | 20.0% |
| ! | TGAATGACTGAAGAAAATAT+TGG | - | chr7_3:34056041-34056060 | Msa1102090:intron | 25.0% |
| !!! | CAAACAACAAATGTTTTTTG+AGG | + | chr7_3:34056358-34056377 | None:intergenic | 25.0% |
| ! | GTAAAATGATATAGTGTCTT+AGG | + | chr7_3:34056460-34056479 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCGTTTT+AGG | + | chr7_3:34056806-34056825 | None:intergenic | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | - | chr7_3:34056807-34056826 | Msa1102090:intron | 25.0% |
| ! | TGTTTGAATTAGTTGAATTG+AGG | - | chr7_3:34057079-34057098 | Msa1102090:intron | 25.0% |
| !!! | ATCTTAGTTTTTGATATTGC+CGG | - | chr7_3:34057240-34057259 | Msa1102090:intron | 25.0% |
| !! | ACCTTGCTAAGTTTATATTT+TGG | - | chr7_3:34057363-34057382 | Msa1102090:intron | 25.0% |
| ! | ACCAAAATATAAACTTAGCA+AGG | + | chr7_3:34057367-34057386 | None:intergenic | 25.0% |
| ! | AATGATCTTACAATTAGGAA+CGG | + | chr7_3:34057397-34057416 | None:intergenic | 25.0% |
| ! | TCGTAAATGATCTTACAATT+AGG | + | chr7_3:34057402-34057421 | None:intergenic | 25.0% |
| ! | TTTATTCACAAAGGGAAAAA+TGG | - | chr7_3:34057551-34057570 | Msa1102090:intron | 25.0% |
| ! | AAAAGATATTAATCCCGAAA+TGG | - | chr7_3:34058107-34058126 | Msa1102090:intron | 25.0% |
| !! | TCACTTTGAATTTTACTAAC+AGG | + | chr7_3:34058586-34058605 | None:intergenic | 25.0% |
| !!! | TTTTCAGGATATCAAAACTA+CGG | + | chr7_3:34058701-34058720 | None:intergenic | 25.0% |
| ! | ACATATTCAATAATGAAGCA+CGG | + | chr7_3:34058733-34058752 | None:intergenic | 25.0% |
| ! | AAGAATGTGTAAGGATATAA+AGG | + | chr7_3:34058758-34058777 | None:intergenic | 25.0% |
| ! | ATATAAGTAATACTTCATGC+TGG | - | chr7_3:34058812-34058831 | Msa1102090:intron | 25.0% |
| !!! | ATTTTTTCTTGATTTGCGAA+AGG | - | chr7_3:34058853-34058872 | Msa1102090:intron | 25.0% |
| !!! | AAACTCGTTTGAAATGTTTT+AGG | - | chr7_3:34059014-34059033 | Msa1102090:intron | 25.0% |
| !!! | TAAACACTCTGAAATGTTTT+AGG | - | chr7_3:34059044-34059063 | Msa1102090:intron | 25.0% |
| ! | CAGTATTCTGATTTATATTG+CGG | - | chr7_3:34059096-34059115 | Msa1102090:intron | 25.0% |
| ! | AGTATTCTGATTTATATTGC+GGG | - | chr7_3:34059097-34059116 | Msa1102090:intron | 25.0% |
| ! | AGTTATCGTAAAATCTTCAT+TGG | - | chr7_3:34059472-34059491 | Msa1102090:intron | 25.0% |
| !! | GTTTTATGTTACATCATCAT+TGG | - | chr7_3:34059633-34059652 | Msa1102090:intron | 25.0% |
| !! | ACATTTTATGATTTGATGTC+AGG | - | chr7_3:34059875-34059894 | Msa1102090:intron | 25.0% |
| ! | ATAATATGCACATATATGAC+AGG | + | chr7_3:34059959-34059978 | None:intergenic | 25.0% |
| !! | CAGATTGTTTATTTCTTGAA+TGG | + | chr7_3:34060323-34060342 | None:intergenic | 25.0% |
| ! | TTGGGTGAAATATAGAAATA+AGG | + | chr7_3:34060646-34060665 | None:intergenic | 25.0% |
| !!! | ACCAACTTCTGAAATTTTTT+AGG | - | chr7_3:34060816-34060835 | Msa1102090:intron | 25.0% |
| ! | ACCTAAAAAATTTCAGAAGT+TGG | + | chr7_3:34060820-34060839 | None:intergenic | 25.0% |
| ! | TAATCCAGAATATGATAACT+TGG | - | chr7_3:34061053-34061072 | Msa1102090:intron | 25.0% |
| ! | CTATATCTATACATTACAAG+TGG | - | chr7_3:34061120-34061139 | Msa1102090:intron | 25.0% |
| ! | TTCATGATAAATCAGCATAT+CGG | + | chr7_3:34061458-34061477 | None:intergenic | 25.0% |
| !!! | ATATGCTGATTTATCATGAA+TGG | - | chr7_3:34061458-34061477 | Msa1102090:intron | 25.0% |
| !! | ATTGTCGAATTTGATAACAT+CGG | - | chr7_3:34061501-34061520 | Msa1102090:intron | 25.0% |
| ! | AACCATTTAAACAATCTACA+TGG | + | chr7_3:34061904-34061923 | None:intergenic | 25.0% |
| ! | ATAATAAATCAAACAAGGTG+TGG | + | chr7_3:34061940-34061959 | None:intergenic | 25.0% |
| !!! | ATAGTAAAGATTTAGCTTGA+GGG | - | chr7_3:34062346-34062365 | Msa1102090:intron | 25.0% |
| !! | TTTGGGTTAAAATGTTTATG+AGG | - | chr7_3:34062714-34062733 | Msa1102090:intron | 25.0% |
| ! | TTAAAATGTTTATGAGGTGA+AGG | - | chr7_3:34062720-34062739 | Msa1102090:intron | 25.0% |
| !! | CAAATTGAGAATTTTTATGG+AGG | - | chr7_3:34062830-34062849 | Msa1102090:intron | 25.0% |
| ! | CAATATGTTTGTGATTTAAG+AGG | + | chr7_3:34062869-34062888 | None:intergenic | 25.0% |
| ! | AACTTAATTGGTTATTGTGA+TGG | - | chr7_3:34062891-34062910 | Msa1102090:intron | 25.0% |
| ! | ACAAGAATGAAAATAGCATT+GGG | - | chr7_3:34063007-34063026 | Msa1102090:CDS | 25.0% |
| ! | ATATAAACATCTTCTCACTT+GGG | + | chr7_3:34063610-34063629 | None:intergenic | 25.0% |
| ! | AATATAAACATCTTCTCACT+TGG | + | chr7_3:34063611-34063630 | None:intergenic | 25.0% |
| ! | AAGCATAACAATGTAGATAT+TGG | - | chr7_3:34063709-34063728 | Msa1102090:intron | 25.0% |
| ! | ATGTTTCTCATGAAATATGA+TGG | - | chr7_3:34064235-34064254 | Msa1102090:intron | 25.0% |
| !! | ATATATTTAGTAGCTTTTGC+CGG | - | chr7_3:34064578-34064597 | Msa1102090:CDS | 25.0% |
| ! | TGAAAAGTTCAATCTTTGAT+CGG | - | chr7_3:34064637-34064656 | Msa1102090:CDS | 25.0% |
| ATCATCACAATTAAGATGCA+GGG | + | chr7_3:34055570-34055589 | None:intergenic | 30.0% | |
| ! | CATCTTAATTGTGATGATGA+AGG | - | chr7_3:34055572-34055591 | Msa1102090:three_prime_UTR | 30.0% |
| AAATCAACGCAATACTACTT+TGG | + | chr7_3:34055717-34055736 | None:intergenic | 30.0% | |
| CAAAATCACTACATAAATCG+AGG | + | chr7_3:34055750-34055769 | None:intergenic | 30.0% | |
| ! | TTTAGAACACTAGTGAAATG+AGG | - | chr7_3:34055862-34055881 | Msa1102090:intron | 30.0% |
| ATTATGTTCTTGATTCTTCG+AGG | - | chr7_3:34055909-34055928 | Msa1102090:intron | 30.0% | |
| TTATGTTCTTGATTCTTCGA+GGG | - | chr7_3:34055910-34055929 | Msa1102090:intron | 30.0% | |
| ATTCAAGACGTGAATCAAAT+CGG | + | chr7_3:34056026-34056045 | None:intergenic | 30.0% | |
| TGATATAGTGTCTTAGGAAA+TGG | + | chr7_3:34056454-34056473 | None:intergenic | 30.0% | |
| !! | AAGCGACATTCATTTTGAAA+CGG | + | chr7_3:34056584-34056603 | None:intergenic | 30.0% |
| !!! | AGAGATAGTTTTGAAATCGA+AGG | + | chr7_3:34057000-34057019 | None:intergenic | 30.0% |
| ! | TTTAGGGTATGTTTGAATCA+AGG | - | chr7_3:34057198-34057217 | Msa1102090:intron | 30.0% |
| TTAGGGTATGTTTGAATCAA+GGG | - | chr7_3:34057199-34057218 | Msa1102090:intron | 30.0% | |
| ! | TATGTTTGAATCAAGGGTTT+TGG | - | chr7_3:34057205-34057224 | Msa1102090:intron | 30.0% |
| ! | TGTAGAGAGTCTTATATCTA+TGG | + | chr7_3:34057438-34057457 | None:intergenic | 30.0% |
| TGGATATTGAGGATATTGAA+GGG | + | chr7_3:34057727-34057746 | None:intergenic | 30.0% | |
| ATGGATATTGAGGATATTGA+AGG | + | chr7_3:34057728-34057747 | None:intergenic | 30.0% | |
| !!! | ATACCCTTGAGGTTTTATTT+TGG | - | chr7_3:34057750-34057769 | Msa1102090:intron | 30.0% |
| !!! | TACCCTTGAGGTTTTATTTT+GGG | - | chr7_3:34057751-34057770 | Msa1102090:intron | 30.0% |
| TAATAAGCAAAGAATGGTGA+AGG | + | chr7_3:34057965-34057984 | None:intergenic | 30.0% | |
| CAGAGTTAATAAGCAAAGAA+TGG | + | chr7_3:34057971-34057990 | None:intergenic | 30.0% | |
| ! | TTCGGGATTAATATCTTTTG+TGG | + | chr7_3:34058106-34058125 | None:intergenic | 30.0% |
| AAACACATTACCTCAAATGT+AGG | + | chr7_3:34058533-34058552 | None:intergenic | 30.0% | |
| AAGGTTAGAAAGAATGTGTA+AGG | + | chr7_3:34058767-34058786 | None:intergenic | 30.0% | |
| GTATTCTGATTTATATTGCG+GGG | - | chr7_3:34059098-34059117 | Msa1102090:intron | 30.0% | |
| GTAAAATCTTCATTGGTAGA+TGG | - | chr7_3:34059479-34059498 | Msa1102090:intron | 30.0% | |
| CAATTGTACTCTGTAGTTAA+AGG | - | chr7_3:34059571-34059590 | Msa1102090:intron | 30.0% | |
| !!! | TAACTGTCCCTATTTTTTGT+GGG | + | chr7_3:34059850-34059869 | None:intergenic | 30.0% |
| ACAAAAAATAGGGACAGTTA+GGG | - | chr7_3:34059850-34059869 | Msa1102090:intron | 30.0% | |
| TTATGATTTGATGTCAGGTT+AGG | - | chr7_3:34059880-34059899 | Msa1102090:intron | 30.0% | |
| TATGATTTGATGTCAGGTTA+GGG | - | chr7_3:34059881-34059900 | Msa1102090:intron | 30.0% | |
| !!! | TTTTTTTTTGAGGGAAGGTT+AGG | - | chr7_3:34059919-34059938 | Msa1102090:intron | 30.0% |
| !!! | TTTTTTTTGAGGGAAGGTTA+GGG | - | chr7_3:34059920-34059939 | Msa1102090:intron | 30.0% |
| !!! | GGTATTTTTGGTTTTGTAAG+GGG | + | chr7_3:34060078-34060097 | None:intergenic | 30.0% |
| !!! | GGGTATTTTTGGTTTTGTAA+GGG | + | chr7_3:34060079-34060098 | None:intergenic | 30.0% |
| !!! | AGGGTATTTTTGGTTTTGTA+AGG | + | chr7_3:34060080-34060099 | None:intergenic | 30.0% |
| !! | AAATCTTCAGCATTTCTAGT+TGG | - | chr7_3:34060195-34060214 | Msa1102090:intron | 30.0% |
| TCTAGTTGGAGCTAAAAATA+AGG | - | chr7_3:34060209-34060228 | Msa1102090:intron | 30.0% | |
| CTAGTTGGAGCTAAAAATAA+GGG | - | chr7_3:34060210-34060229 | Msa1102090:intron | 30.0% | |
| TAATATCAGTAGCTACAAGA+TGG | + | chr7_3:34060384-34060403 | None:intergenic | 30.0% | |
| ACAGAAGTAGCTAAATATGA+CGG | + | chr7_3:34060495-34060514 | None:intergenic | 30.0% | |
| TATACAACTAATGCATGAAC+TGG | + | chr7_3:34060976-34060995 | None:intergenic | 30.0% | |
| !! | TATTCTGGATTAGCAAAACT+TGG | + | chr7_3:34061045-34061064 | None:intergenic | 30.0% |
| CATACCAAGTTATCATATTC+TGG | + | chr7_3:34061060-34061079 | None:intergenic | 30.0% | |
| ! | TGGTATGATAATTTTCACCT+AGG | - | chr7_3:34061073-34061092 | Msa1102090:intron | 30.0% |
| ! | TATGATAATTTTCACCTAGG+AGG | - | chr7_3:34061076-34061095 | Msa1102090:intron | 30.0% |
| ACAAGGATGAAAATAGCATT+GGG | + | chr7_3:34061186-34061205 | None:intergenic | 30.0% | |
| TATCTATGAGTATATGCCAT+TGG | + | chr7_3:34061245-34061264 | None:intergenic | 30.0% | |
| AAACATCTTGTCAATTCGAT+TGG | + | chr7_3:34061298-34061317 | None:intergenic | 30.0% | |
| CAAGATGTTTGTGATTTAAG+AGG | - | chr7_3:34061308-34061327 | Msa1102090:intron | 30.0% | |
| !!! | AGAAGACTGCAAATTTTTTG+TGG | + | chr7_3:34061350-34061369 | None:intergenic | 30.0% |
| GTGAAATAGCTTAACAAGAA+AGG | + | chr7_3:34061379-34061398 | None:intergenic | 30.0% | |
| AATATTGGACCTGTGTATAA+AGG | + | chr7_3:34061435-34061454 | None:intergenic | 30.0% | |
| AAATCAGCATATCGGAATAT+TGG | + | chr7_3:34061450-34061469 | None:intergenic | 30.0% | |
| CATAATTGAGATATGACAAC+TGG | + | chr7_3:34061579-34061598 | None:intergenic | 30.0% | |
| ATGATTGTAGATTGTGTGAA+TGG | + | chr7_3:34061698-34061717 | None:intergenic | 30.0% | |
| CACAATCTACAATCATTACA+TGG | - | chr7_3:34061702-34061721 | Msa1102090:intron | 30.0% | |
| CATTTAAACAATCTACATGG+CGG | + | chr7_3:34061901-34061920 | None:intergenic | 30.0% | |
| !! | TTACCATTTTGATCTTGTGA+TGG | - | chr7_3:34062296-34062315 | Msa1102090:intron | 30.0% |
| !! | CATAGTAAAGATTTAGCTTG+AGG | - | chr7_3:34062345-34062364 | Msa1102090:intron | 30.0% |
| !! | TAGTAAAGATTTAGCTTGAG+GGG | - | chr7_3:34062347-34062366 | Msa1102090:intron | 30.0% |
| AAGATTGTAGATTGTGTGAA+TGG | + | chr7_3:34062536-34062555 | None:intergenic | 30.0% | |
| TCTAAGTCATAATTCGTCTT+AGG | + | chr7_3:34062646-34062665 | None:intergenic | 30.0% | |
| CTTGTAATGTAAACGCATAT+TGG | + | chr7_3:34062671-34062690 | None:intergenic | 30.0% | |
| TAACCCAAAATTAATGGTTG+CGG | + | chr7_3:34062703-34062722 | None:intergenic | 30.0% | |
| GTGAAATAGCTTAACTAGAA+AGG | - | chr7_3:34062799-34062818 | Msa1102090:intron | 30.0% | |
| TTAATTGGTTATTGTGATGG+TGG | - | chr7_3:34062894-34062913 | Msa1102090:intron | 30.0% | |
| GTATATGCAATTTCGATCTT+TGG | - | chr7_3:34062934-34062953 | Msa1102090:intron | 30.0% | |
| ATTCTTGTGTTTCAATTCAG+TGG | + | chr7_3:34062995-34063014 | None:intergenic | 30.0% | |
| CACAAGAATGAAAATAGCAT+TGG | - | chr7_3:34063006-34063025 | Msa1102090:CDS | 30.0% | |
| ATCTCTCCAAATGAAAGAAA+TGG | + | chr7_3:34063072-34063091 | None:intergenic | 30.0% | |
| ! | GTATGATAATTTTCACCTAG+TGG | + | chr7_3:34061075-34061094 | None:intergenic | 30.0% |
| ! | CATACCAAGTTATCAGATTT+TGG | - | chr7_3:34063173-34063192 | Msa1102090:CDS | 30.0% |
| CTAACCAAAATCTGATAACT+TGG | + | chr7_3:34063180-34063199 | None:intergenic | 30.0% | |
| !!! | AGATTTTGGTTAGCAAAACT+TGG | - | chr7_3:34063187-34063206 | Msa1102090:CDS | 30.0% |
| TTAGCAAAACTTGGATCAAT+TGG | - | chr7_3:34063196-34063215 | Msa1102090:CDS | 30.0% | |
| TCATGTATCCACCAAATTAT+TGG | - | chr7_3:34063228-34063247 | Msa1102090:CDS | 30.0% | |
| CATGTATCCACCAAATTATT+GGG | - | chr7_3:34063229-34063248 | Msa1102090:CDS | 30.0% | |
| ATGTATCCACCAAATTATTG+GGG | - | chr7_3:34063230-34063249 | Msa1102090:CDS | 30.0% | |
| ATCATATGTCCCCAATAATT+TGG | + | chr7_3:34063242-34063261 | None:intergenic | 30.0% | |
| AAATTATTGGGGACATATGA+TGG | - | chr7_3:34063241-34063260 | Msa1102090:CDS | 30.0% | |
| CAAAGAAAAAAGGCAAGTAA+TGG | + | chr7_3:34064022-34064041 | None:intergenic | 30.0% | |
| !! | TCTCATGAAATATGATGGAT+TGG | - | chr7_3:34064240-34064259 | Msa1102090:intron | 30.0% |
| !! | CATCATTTTAGTGCAGTTTT+TGG | + | chr7_3:34064411-34064430 | None:intergenic | 30.0% |
| ACTAAAATGATGTGAATGAG+CGG | - | chr7_3:34064419-34064438 | Msa1102090:intron | 30.0% | |
| TGCTTATTTGTATTATTGGC+TGG | - | chr7_3:34064449-34064468 | Msa1102090:intron | 30.0% | |
| ATTTGGCAACTCAAATTACA+AGG | + | chr7_3:34064551-34064570 | None:intergenic | 30.0% | |
| !! | TAATTTGAGTTGCCAAATTC+AGG | - | chr7_3:34064553-34064572 | Msa1102090:CDS | 30.0% |
| !! | TATTTTGAACAGTCCAAATC+CGG | + | chr7_3:34064600-34064619 | None:intergenic | 30.0% |
| TGATGAGAATGCTGTCATTA+TGG | - | chr7_3:34055497-34055516 | Msa1102090:three_prime_UTR | 35.0% | |
| CATCATCACAATTAAGATGC+AGG | + | chr7_3:34055571-34055590 | None:intergenic | 35.0% | |
| GATGTTCAACAAAAGATCGT+AGG | - | chr7_3:34055837-34055856 | Msa1102090:CDS | 35.0% | |
| !!! | GTGGAAACATCGTTGTTTTT+TGG | - | chr7_3:34055945-34055964 | Msa1102090:intron | 35.0% |
| ATTCCTTCAACAACGAAGTA+AGG | + | chr7_3:34055975-34055994 | None:intergenic | 35.0% | |
| ATCAGCGATCTTGATTCTTT+AGG | + | chr7_3:34056078-34056097 | None:intergenic | 35.0% | |
| CGATTCCAAACATGAAATCA+AGG | + | chr7_3:34056156-34056175 | None:intergenic | 35.0% | |
| AGCAAAAACAATTACATCCG+CGG | - | chr7_3:34056211-34056230 | Msa1102090:intron | 35.0% | |
| ATACCTAACTGAAACCGTTA+CGG | - | chr7_3:34056235-34056254 | Msa1102090:intron | 35.0% | |
| TTAAAACGTTGCAACCGTAA+CGG | + | chr7_3:34056252-34056271 | None:intergenic | 35.0% | |
| !!! | GACATTCATTTTGAAACGGA+TGG | + | chr7_3:34056811-34056830 | None:intergenic | 35.0% |
| !!! | GACATTCATTTTGAAACGGA+GGG | - | chr7_3:34056811-34056830 | Msa1102090:intron | 35.0% |
| ! | TTTGAAATCGAAGGCTTACA+AGG | + | chr7_3:34056991-34057010 | None:intergenic | 35.0% |
| CTTGAAAGCAACATAGTTGT+CGG | + | chr7_3:34057142-34057161 | None:intergenic | 35.0% | |
| ATCTTACAATTAGGAACGGA+GGG | + | chr7_3:34057393-34057412 | None:intergenic | 35.0% | |
| ATATTGAGGATATTGAAGGG+AGG | + | chr7_3:34057724-34057743 | None:intergenic | 35.0% | |
| ! | AAGGGTATGTATGGATATTG+AGG | + | chr7_3:34057738-34057757 | None:intergenic | 35.0% |
| AATATCCATACATACCCTTG+AGG | - | chr7_3:34057739-34057758 | Msa1102090:intron | 35.0% | |
| ! | TAAAACCTCAAGGGTATGTA+TGG | + | chr7_3:34057747-34057766 | None:intergenic | 35.0% |
| CACCCAAAATAAAACCTCAA+GGG | + | chr7_3:34057756-34057775 | None:intergenic | 35.0% | |
| TCACCCAAAATAAAACCTCA+AGG | + | chr7_3:34057757-34057776 | None:intergenic | 35.0% | |
| !!! | TGAGGTTTTATTTTGGGTGA+AGG | - | chr7_3:34057757-34057776 | Msa1102090:intron | 35.0% |
| !!! | GAGGTTTTATTTTGGGTGAA+GGG | - | chr7_3:34057758-34057777 | Msa1102090:intron | 35.0% |
| !!! | AGGTTTTATTTTGGGTGAAG+GGG | - | chr7_3:34057759-34057778 | Msa1102090:intron | 35.0% |
| !! | GGTATTTGATTTTGATCGTG+TGG | - | chr7_3:34057818-34057837 | Msa1102090:intron | 35.0% |
| !! | ATCCGAAGAAGTATTGTGTT+AGG | - | chr7_3:34057859-34057878 | Msa1102090:intron | 35.0% |
| ! | ATATCTTTTGTGGTAGTTCC+AGG | + | chr7_3:34058096-34058115 | None:intergenic | 35.0% |
| GCTGTGAGTAATCAGTAAAT+TGG | - | chr7_3:34058391-34058410 | Msa1102090:intron | 35.0% | |
| ATGACATAACCATGCATTAC+AGG | - | chr7_3:34058469-34058488 | Msa1102090:intron | 35.0% | |
| ! | CTTCAAGAACTTTTAACGAG+CGG | - | chr7_3:34058492-34058511 | Msa1102090:intron | 35.0% |
| ! | TTCAAGAACTTTTAACGAGC+GGG | - | chr7_3:34058493-34058512 | Msa1102090:intron | 35.0% |
| ! | TCATTGGTAGATGGTTAGTT+AGG | - | chr7_3:34059488-34059507 | Msa1102090:intron | 35.0% |
| ! | CATTGGTAGATGGTTAGTTA+GGG | - | chr7_3:34059489-34059508 | Msa1102090:intron | 35.0% |
| TTACCAGTCCCACAAAAAAT+AGG | - | chr7_3:34059839-34059858 | Msa1102090:intron | 35.0% | |
| TACCAGTCCCACAAAAAATA+GGG | - | chr7_3:34059840-34059859 | Msa1102090:intron | 35.0% | |
| !!! | CTAACTGTCCCTATTTTTTG+TGG | + | chr7_3:34059851-34059870 | None:intergenic | 35.0% |
| CACAAAAAATAGGGACAGTT+AGG | - | chr7_3:34059849-34059868 | Msa1102090:intron | 35.0% | |
| ATGCACATATATGACAGGTT+GGG | + | chr7_3:34059954-34059973 | None:intergenic | 35.0% | |
| TATGCACATATATGACAGGT+TGG | + | chr7_3:34059955-34059974 | None:intergenic | 35.0% | |
| AGATAATAGGAGGGATTAGA+GGG | + | chr7_3:34060099-34060118 | None:intergenic | 35.0% | |
| GGTGAATAAATCAGTGAGTT+AGG | + | chr7_3:34060141-34060160 | None:intergenic | 35.0% | |
| ATTTATTCACCATCACCTCA+TGG | - | chr7_3:34060150-34060169 | Msa1102090:intron | 35.0% | |
| AAAGGACAACCATGTAATTC+TGG | - | chr7_3:34060241-34060260 | Msa1102090:intron | 35.0% | |
| AAATGCCTTCCAGAATTACA+TGG | + | chr7_3:34060253-34060272 | None:intergenic | 35.0% | |
| AAATATACTTCACAGTCTGG+AGG | + | chr7_3:34060519-34060538 | None:intergenic | 35.0% | |
| GGAAAATATACTTCACAGTC+TGG | + | chr7_3:34060522-34060541 | None:intergenic | 35.0% | |
| TCCAAACATCATATACTCCT+AGG | - | chr7_3:34060539-34060558 | Msa1102090:intron | 35.0% | |
| ! | TCCTAGGAGTATATGATGTT+TGG | + | chr7_3:34060543-34060562 | None:intergenic | 35.0% |
| AACATCATATACTCCTAGGA+TGG | - | chr7_3:34060543-34060562 | Msa1102090:intron | 35.0% | |
| ! | TCTTGATGCTTGTTGCTATT+TGG | - | chr7_3:34060596-34060615 | Msa1102090:intron | 35.0% |
| !! | CTTGATGCTTGTTGCTATTT+GGG | - | chr7_3:34060597-34060616 | Msa1102090:intron | 35.0% |
| CTATATTTCACCCAACTTCA+TGG | - | chr7_3:34060651-34060670 | Msa1102090:intron | 35.0% | |
| TGTTTCCATAATGTCTGTGA+GGG | + | chr7_3:34060751-34060770 | None:intergenic | 35.0% | |
| ATGTTTCCATAATGTCTGTG+AGG | + | chr7_3:34060752-34060771 | None:intergenic | 35.0% | |
| ! | ATTTGTACATGGTGGAACAA+GGG | + | chr7_3:34060860-34060879 | None:intergenic | 35.0% |
| ! | GAACAATGATTTGTACATGG+TGG | + | chr7_3:34060868-34060887 | None:intergenic | 35.0% |
| ! | GGTGAACAATGATTTGTACA+TGG | + | chr7_3:34060871-34060890 | None:intergenic | 35.0% |
| ACTCGAGTAATAGGAACATA+TGG | + | chr7_3:34061000-34061019 | None:intergenic | 35.0% | |
| CACAAGGATGAAAATAGCAT+TGG | + | chr7_3:34061187-34061206 | None:intergenic | 35.0% | |
| ! | TCGATTGGTTATTGTGGTTA+TGG | + | chr7_3:34061283-34061302 | None:intergenic | 35.0% |
| ! | GTCAATTCGATTGGTTATTG+TGG | + | chr7_3:34061289-34061308 | None:intergenic | 35.0% |
| !!! | AGACTGCAAATTTTTTGTGG+AGG | + | chr7_3:34061347-34061366 | None:intergenic | 35.0% |
| TTAAGCTGACCTTTATACAC+AGG | - | chr7_3:34061423-34061442 | Msa1102090:intron | 35.0% | |
| CGCCATGTAGATTGTTTAAA+TGG | - | chr7_3:34061899-34061918 | Msa1102090:CDS | 35.0% | |
| ! | GCTACAAAGATTTTCTCTAG+TGG | - | chr7_3:34061990-34062009 | Msa1102090:intron | 35.0% |
| ! | AATTATCTCTCCTTGGTTCT+TGG | - | chr7_3:34062075-34062094 | Msa1102090:CDS | 35.0% |
| ! | ATTATCTCTCCTTGGTTCTT+GGG | - | chr7_3:34062076-34062095 | Msa1102090:CDS | 35.0% |
| AAGATTGCAGTTAGTGTGAA+TGG | - | chr7_3:34062116-34062135 | Msa1102090:CDS | 35.0% | |
| TCACCATCACAAGATCAAAA+TGG | + | chr7_3:34062302-34062321 | None:intergenic | 35.0% | |
| !! | AGTAAAGATTTAGCTTGAGG+GGG | - | chr7_3:34062348-34062367 | Msa1102090:intron | 35.0% |
| ATAATTCGTCTTAGGACCTA+CGG | + | chr7_3:34062638-34062657 | None:intergenic | 35.0% | |
| ! | AAGCCGCAACCATTAATTTT+GGG | - | chr7_3:34062697-34062716 | Msa1102090:intron | 35.0% |
| ! | TTTATGAGGTGAAGGCTTTT+GGG | - | chr7_3:34062728-34062747 | Msa1102090:intron | 35.0% |
| CCTAAATCTTAGTGCTCTTA+AGG | + | chr7_3:34062771-34062790 | None:intergenic | 35.0% | |
| !! | CCTTAAGAGCACTAAGATTT+AGG | - | chr7_3:34062768-34062787 | Msa1102090:intron | 35.0% |
| TCCTCTCCATTTCTTTCATT+TGG | - | chr7_3:34063063-34063082 | Msa1102090:intron | 35.0% | |
| TCCAAATGAAAGAAATGGAG+AGG | + | chr7_3:34063067-34063086 | None:intergenic | 35.0% | |
| ! | AATTTTCACCTAGTGGTTAG+TGG | + | chr7_3:34063151-34063170 | None:intergenic | 35.0% |
| ATATGTCCCCAATAATTTGG+TGG | + | chr7_3:34063239-34063258 | None:intergenic | 35.0% | |
| TATCTATCTGTTGCACGAAA+TGG | - | chr7_3:34063274-34063293 | Msa1102090:intron | 35.0% | |
| CTTGTATTCCATCAAACTTG+AGG | + | chr7_3:34063349-34063368 | None:intergenic | 35.0% | |
| AGTTTGATGGAATACAAGCA+AGG | - | chr7_3:34063351-34063370 | Msa1102090:intron | 35.0% | |
| GTTTGATGGAATACAAGCAA+GGG | - | chr7_3:34063352-34063371 | Msa1102090:intron | 35.0% | |
| TGTGTACATGTCAAGTTTGA+TGG | - | chr7_3:34063385-34063404 | Msa1102090:intron | 35.0% | |
| AGTTTGATGGAATACAAGCA+AGG | - | chr7_3:34063351-34063370 | Msa1102090:intron | 35.0% | |
| GTTTGATGGAATACAAGCAA+GGG | - | chr7_3:34063352-34063371 | Msa1102090:intron | 35.0% | |
| AATGTGTACGTGTCAAAACA+AGG | - | chr7_3:34063430-34063449 | Msa1102090:intron | 35.0% | |
| ATGTGTACGTGTCAAAACAA+GGG | - | chr7_3:34063431-34063450 | Msa1102090:intron | 35.0% | |
| ATATCTAAGCCCATGTAACA+TGG | - | chr7_3:34063671-34063690 | Msa1102090:intron | 35.0% | |
| CTACATTGTTATGCTTAACC+CGG | + | chr7_3:34063705-34063724 | None:intergenic | 35.0% | |
| AAAGCTAGCTCATAAGAAGA+GGG | + | chr7_3:34063922-34063941 | None:intergenic | 35.0% | |
| AAAAGCTAGCTCATAAGAAG+AGG | + | chr7_3:34063923-34063942 | None:intergenic | 35.0% | |
| !!! | TCTTCTTATGAGCTAGCTTT+TGG | - | chr7_3:34063922-34063941 | Msa1102090:intron | 35.0% |
| !!! | CTTCTTATGAGCTAGCTTTT+GGG | - | chr7_3:34063923-34063942 | Msa1102090:intron | 35.0% |
| GGAAGAATAAAAGAAGCAAC+TGG | - | chr7_3:34064165-34064184 | Msa1102090:intron | 35.0% | |
| ! | TTGATGAATCTTTTGCACAC+AGG | - | chr7_3:34064265-34064284 | Msa1102090:intron | 35.0% |
| ATGTAAGTGATATTCCACCA+CGG | + | chr7_3:34064319-34064338 | None:intergenic | 35.0% | |
| AATGACAGCATTCTCATCAC+AGG | + | chr7_3:34055496-34055515 | None:intergenic | 40.0% | |
| TCAACGCAATACTACTTTGG+TGG | + | chr7_3:34055714-34055733 | None:intergenic | 40.0% | |
| GCAATAGCAGAACGAAAGAT+CGG | + | chr7_3:34055806-34055825 | None:intergenic | 40.0% | |
| AGAACACTAGTGAAATGAGG+AGG | - | chr7_3:34055865-34055884 | Msa1102090:intron | 40.0% | |
| TCCAGCCTTGATTTCATGTT+TGG | - | chr7_3:34056148-34056167 | Msa1102090:intron | 40.0% | |
| TCCAAACATGAAATCAAGGC+TGG | + | chr7_3:34056152-34056171 | None:intergenic | 40.0% | |
| ATTCGTGAAGATTGTTGCAG+TGG | - | chr7_3:34056177-34056196 | Msa1102090:intron | 40.0% | |
| ! | CGTGCAGAGTATTAATTGGA+AGG | + | chr7_3:34056684-34056703 | None:intergenic | 40.0% |
| ! | GTAGCGTGCAGAGTATTAAT+TGG | + | chr7_3:34056688-34056707 | None:intergenic | 40.0% |
| !!! | CGACATTCATTTTGAAACGG+AGG | - | chr7_3:34056810-34056829 | Msa1102090:intron | 40.0% |
| !!! | ATTCATTTTGAAACGGAGGG+AGG | - | chr7_3:34056814-34056833 | Msa1102090:intron | 40.0% |
| !! | CATCAGGTTGAATGTTGAGA+AGG | + | chr7_3:34056957-34056976 | None:intergenic | 40.0% |
| CAAGGAAACTGTAGTTCATC+AGG | + | chr7_3:34056973-34056992 | None:intergenic | 40.0% | |
| !! | CGACAACTATGTTGCTTTCA+AGG | - | chr7_3:34057140-34057159 | Msa1102090:intron | 40.0% |
| !! | CTGCATTTGTTGCTGATTCT+CGG | - | chr7_3:34057287-34057306 | Msa1102090:intron | 40.0% |
| !! | AGCAAGGTTCTAAATAGCGA+CGG | + | chr7_3:34057351-34057370 | None:intergenic | 40.0% |
| GATCTTACAATTAGGAACGG+AGG | + | chr7_3:34057394-34057413 | None:intergenic | 40.0% | |
| TCACAAAGGGAAAAATGGAG+AGG | - | chr7_3:34057556-34057575 | Msa1102090:intron | 40.0% | |
| AAAGGGAAAAATGGAGAGGA+GGG | - | chr7_3:34057560-34057579 | Msa1102090:intron | 40.0% | |
| !!! | GGTTTTATTTTGGGTGAAGG+GGG | - | chr7_3:34057760-34057779 | Msa1102090:intron | 40.0% |
| !!! | GTTTTATTTTGGGTGAAGGG+GGG | - | chr7_3:34057761-34057780 | Msa1102090:intron | 40.0% |
| GGCCTAACACAATACTTCTT+CGG | + | chr7_3:34057864-34057883 | None:intergenic | 40.0% | |
| TATTGTGTTAGGCCTAACAG+TGG | - | chr7_3:34057870-34057889 | Msa1102090:intron | 40.0% | |
| ATTGTGTTAGGCCTAACAGT+GGG | - | chr7_3:34057871-34057890 | Msa1102090:intron | 40.0% | |
| GTTACATCACATGTAGACCT+CGG | + | chr7_3:34057906-34057925 | None:intergenic | 40.0% | |
| AGGTCTACATGTGATGTAAC+AGG | - | chr7_3:34057906-34057925 | Msa1102090:intron | 40.0% | |
| AGTAACAATGCAAGCGCAAA+AGG | - | chr7_3:34058011-34058030 | Msa1102090:intron | 40.0% | |
| GACTTGCAATCACACTTTGA+AGG | + | chr7_3:34058074-34058093 | None:intergenic | 40.0% | |
| ! | GGAACTAACGATTTTTCCTG+CGG | - | chr7_3:34058165-34058184 | Msa1102090:intron | 40.0% |
| ! | TGCATGCAAAGAAAGAGCAT+AGG | + | chr7_3:34058211-34058230 | None:intergenic | 40.0% |
| TTGCATGCAGTTTAGCAAAG+AGG | - | chr7_3:34058222-34058241 | Msa1102090:intron | 40.0% | |
| ACTTGCACTCTTCAACATTG+TGG | + | chr7_3:34058252-34058271 | None:intergenic | 40.0% | |
| ! | ATGTTGAAGAGTGCAAGTTG+AGG | - | chr7_3:34058254-34058273 | Msa1102090:intron | 40.0% |
| ! | TGTTGAAGAGTGCAAGTTGA+GGG | - | chr7_3:34058255-34058274 | Msa1102090:intron | 40.0% |
| TTCTTCGCCTGATTCTGTAT+CGG | - | chr7_3:34058336-34058355 | Msa1102090:intron | 40.0% | |
| CCTGATTCTGTATCGGAAAA+CGG | - | chr7_3:34058343-34058362 | Msa1102090:intron | 40.0% | |
| TTCTTGAAGCCTGTAATGCA+TGG | + | chr7_3:34058481-34058500 | None:intergenic | 40.0% | |
| ! | GCACGGTTTGCAAATTTTTC+AGG | + | chr7_3:34058716-34058735 | None:intergenic | 40.0% |
| TGCAAACAAGCATGTTGTCA+TGG | - | chr7_3:34058891-34058910 | Msa1102090:intron | 40.0% | |
| GACATCAGCTCAAGTTTCAA+AGG | - | chr7_3:34059339-34059358 | Msa1102090:intron | 40.0% | |
| CATAACATACCACTTCTTGC+TGG | + | chr7_3:34059408-34059427 | None:intergenic | 40.0% | |
| CAGCAAGAAGTGGTATGTTA+TGG | - | chr7_3:34059406-34059425 | Msa1102090:intron | 40.0% | |
| ! | TTAGTTAGGGCATTTCTGCT+TGG | - | chr7_3:34059502-34059521 | Msa1102090:intron | 40.0% |
| !!! | GAGGGATTAGAGGGTATTTT+TGG | + | chr7_3:34060090-34060109 | None:intergenic | 40.0% |
| CAGATAATAGGAGGGATTAG+AGG | + | chr7_3:34060100-34060119 | None:intergenic | 40.0% | |
| CTAATCCCTCCTATTATCTG+TGG | - | chr7_3:34060100-34060119 | Msa1102090:intron | 40.0% | |
| ATGATGAGGCCACAGATAAT+AGG | + | chr7_3:34060112-34060131 | None:intergenic | 40.0% | |
| TAACATTCACCATGAGGTGA+TGG | + | chr7_3:34060162-34060181 | None:intergenic | 40.0% | |
| GACAACCATGTAATTCTGGA+AGG | - | chr7_3:34060245-34060264 | Msa1102090:intron | 40.0% | |
| !! | TCTGGAAGGCATTTCTGAAA+AGG | - | chr7_3:34060259-34060278 | Msa1102090:intron | 40.0% |
| !! | AGTCTACCCTGTTTTGAATG+GGG | + | chr7_3:34060348-34060367 | None:intergenic | 40.0% |
| !! | GAGTCTACCCTGTTTTGAAT+GGG | + | chr7_3:34060349-34060368 | None:intergenic | 40.0% |
| TATTTCACCCAACTTCATGG+TGG | - | chr7_3:34060654-34060673 | Msa1102090:intron | 40.0% | |
| ATTTCACCCAACTTCATGGT+GGG | - | chr7_3:34060655-34060674 | Msa1102090:intron | 40.0% | |
| CTCTCAAGTTCTACAGTTGT+GGG | - | chr7_3:34060697-34060716 | Msa1102090:intron | 40.0% | |
| ATGTCTGTGAGGGTAAAGAT+GGG | + | chr7_3:34060741-34060760 | None:intergenic | 40.0% | |
| AATGTCTGTGAGGGTAAAGA+TGG | + | chr7_3:34060742-34060761 | None:intergenic | 40.0% | |
| CTTTACCCTCACAGACATTA+TGG | - | chr7_3:34060743-34060762 | Msa1102090:CDS | 40.0% | |
| GGAAACATTGTTAACCCATC+TGG | - | chr7_3:34060764-34060783 | Msa1102090:CDS | 40.0% | |
| TTGTTAACCCATCTGGCTAT+TGG | - | chr7_3:34060771-34060790 | Msa1102090:CDS | 40.0% | |
| !! | TGGCTATTGGTTTCAGCTAA+AGG | - | chr7_3:34060784-34060803 | Msa1102090:CDS | 40.0% |
| !! | GGCTATTGGTTTCAGCTAAA+GGG | - | chr7_3:34060785-34060804 | Msa1102090:CDS | 40.0% |
| ! | ATTGGTTTCAGCTAAAGGGA+TGG | - | chr7_3:34060789-34060808 | Msa1102090:CDS | 40.0% |
| TTGGTTTCAGCTAAAGGGAT+GGG | - | chr7_3:34060790-34060809 | Msa1102090:CDS | 40.0% | |
| ! | GATTTGTACATGGTGGAACA+AGG | + | chr7_3:34060861-34060880 | None:intergenic | 40.0% |
| AGATGAACGAGACTCTGATT+GGG | - | chr7_3:34060921-34060940 | Msa1102090:intron | 40.0% | |
| TAATGCATGAACTGGACAAG+AGG | + | chr7_3:34060968-34060987 | None:intergenic | 40.0% | |
| ATGACTCGTACTCGAGTAAT+AGG | + | chr7_3:34061009-34061028 | None:intergenic | 40.0% | |
| TTAGCAAAACTTGGACCAAG+TGG | + | chr7_3:34061036-34061055 | None:intergenic | 40.0% | |
| ! | ATTTTCACCTAGGAGGATGT+TGG | - | chr7_3:34061083-34061102 | Msa1102090:intron | 40.0% |
| ! | ATAGCATTGGGAGTAGAAGA+GGG | + | chr7_3:34061174-34061193 | None:intergenic | 40.0% |
| ! | AATAGCATTGGGAGTAGAAG+AGG | + | chr7_3:34061175-34061194 | None:intergenic | 40.0% |
| ATTGGATTCTTCCTCCTCAT+AGG | + | chr7_3:34061227-34061246 | None:intergenic | 40.0% | |
| TATGAGGAGGAAGAATCCAA+TGG | - | chr7_3:34061226-34061245 | Msa1102090:intron | 40.0% | |
| AATGGTTGCTGATGATTGAG+AGG | - | chr7_3:34061476-34061495 | Msa1102090:intron | 40.0% | |
| ACTGCTTTAGTTGCACACAT+TGG | - | chr7_3:34062031-34062050 | Msa1102090:CDS | 40.0% | |
| TCCTCTCAATTATCTCTCCT+TGG | - | chr7_3:34062068-34062087 | Msa1102090:CDS | 40.0% | |
| ACCAAGGAGAGATAATTGAG+AGG | + | chr7_3:34062072-34062091 | None:intergenic | 40.0% | |
| CCTCAGGTAGATTGAAATTG+CGG | - | chr7_3:34062608-34062627 | Msa1102090:intron | 40.0% | |
| CTCAGGTAGATTGAAATTGC+GGG | - | chr7_3:34062609-34062628 | Msa1102090:intron | 40.0% | |
| TCAGGTAGATTGAAATTGCG+GGG | - | chr7_3:34062610-34062629 | Msa1102090:intron | 40.0% | |
| ! | GAAGCCGCAACCATTAATTT+TGG | - | chr7_3:34062696-34062715 | Msa1102090:intron | 40.0% |
| ! | GTTTATGAGGTGAAGGCTTT+TGG | - | chr7_3:34062727-34062746 | Msa1102090:intron | 40.0% |
| TTAAGGCCACCTTTGTATAC+AGG | + | chr7_3:34062754-34062773 | None:intergenic | 40.0% | |
| AGAGGAGGAAGATCATGTAA+AGG | + | chr7_3:34062965-34062984 | None:intergenic | 40.0% | |
| GAAATGGAGAGGACACTAAA+TGG | + | chr7_3:34063056-34063075 | None:intergenic | 40.0% | |
| TATCTGTTGCACGAAATGGA+GGG | - | chr7_3:34063278-34063297 | Msa1102090:intron | 40.0% | |
| GTATTCCATCAAACTTGAGG+CGG | + | chr7_3:34063346-34063365 | None:intergenic | 40.0% | |
| ACCCAGAAAGCTTAAGTGTT+CGG | - | chr7_3:34063471-34063490 | Msa1102090:intron | 40.0% | |
| ACCGAACACTTAAGCTTTCT+GGG | + | chr7_3:34063475-34063494 | None:intergenic | 40.0% | |
| CGAGAGAAGATGCATATATG+TGG | - | chr7_3:34063557-34063576 | Msa1102090:intron | 40.0% | |
| ! | TCACTTGGGATTGATTAGTC+AGG | + | chr7_3:34063596-34063615 | None:intergenic | 40.0% |
| AAAGCTAGCTCATAAGACGA+GGG | + | chr7_3:34063644-34063663 | None:intergenic | 40.0% | |
| AAAAGCTAGCTCATAAGACG+AGG | + | chr7_3:34063645-34063664 | None:intergenic | 40.0% | |
| GCTCTGATACCATGTTACAT+GGG | + | chr7_3:34063683-34063702 | None:intergenic | 40.0% | |
| ATGTAACATGGTATCAGAGC+CGG | - | chr7_3:34063683-34063702 | Msa1102090:intron | 40.0% | |
| GATATTGGACTGAGAATCCA+AGG | - | chr7_3:34063724-34063743 | Msa1102090:intron | 40.0% | |
| CTGTTGGATGTTTATGTGGT+TGG | - | chr7_3:34063893-34063912 | Msa1102090:intron | 40.0% | |
| GTTGTTCTTGTTGCTGTGAT+TGG | - | chr7_3:34064341-34064360 | Msa1102090:intron | 40.0% | |
| !!! | TGCTGTGATTGGCTTCATTT+TGG | - | chr7_3:34064352-34064371 | Msa1102090:intron | 40.0% |
| !!! | GCTGTGATTGGCTTCATTTT+GGG | - | chr7_3:34064353-34064372 | Msa1102090:intron | 40.0% |
| !!! | TTTTGGGATACCTCTTGAAG+AGG | - | chr7_3:34064369-34064388 | Msa1102090:intron | 40.0% |
| !! | GTGCAGTTTTTGGAGATCAA+AGG | + | chr7_3:34064401-34064420 | None:intergenic | 40.0% |
| ! | TTAGTAGCTTTTGCCGGATT+TGG | - | chr7_3:34064584-34064603 | Msa1102090:CDS | 40.0% |
| TCGCAATCATCGAAGACACA+AGG | + | chr7_3:34055531-34055550 | None:intergenic | 45.0% | |
| TGTGTCTTCGATGATTGCGA+CGG | - | chr7_3:34055531-34055550 | Msa1102090:three_prime_UTR | 45.0% | |
| ATGAAGGCTCTATACGATCG+TGG | - | chr7_3:34055588-34055607 | Msa1102090:three_prime_UTR | 45.0% | |
| TTCCCTCCTCAGAATATCCT+CGG | - | chr7_3:34055633-34055652 | Msa1102090:three_prime_UTR | 45.0% | |
| CGAAGACGTTGTGTCAGTTT+CGG | + | chr7_3:34055687-34055706 | None:intergenic | 45.0% | |
| CTAGTGAAATGAGGAGGTAG+AGG | - | chr7_3:34055871-34055890 | Msa1102090:intron | 45.0% | |
| TCGCCTTACTTCGTTGTTGA+AGG | - | chr7_3:34055969-34055988 | Msa1102090:intron | 45.0% | |
| GGTTTCAGTTAGGTATTCCG+CGG | + | chr7_3:34056231-34056250 | None:intergenic | 45.0% | |
| CAACCGTAACGGTTTCAGTT+AGG | + | chr7_3:34056241-34056260 | None:intergenic | 45.0% | |
| TTGAATGTTGAGAAGGTCGC+CGG | + | chr7_3:34056950-34056969 | None:intergenic | 45.0% | |
| ATTAAAGCGTGTTGCGGTTC+CGG | + | chr7_3:34057262-34057281 | None:intergenic | 45.0% | |
| ACCGCAACACGCTTTAATTG+AGG | - | chr7_3:34057264-34057283 | Msa1102090:intron | 45.0% | |
| GCCTCAATTAAAGCGTGTTG+CGG | + | chr7_3:34057268-34057287 | None:intergenic | 45.0% | |
| ATTCTCGGCAATATCGAGGA+TGG | - | chr7_3:34057302-34057321 | Msa1102090:intron | 45.0% | |
| !! | AAGGTTCTAAATAGCGACGG+TGG | + | chr7_3:34057348-34057367 | None:intergenic | 45.0% |
| CAAAGGGAAAAATGGAGAGG+AGG | - | chr7_3:34057559-34057578 | Msa1102090:intron | 45.0% | |
| !!! | TGAAGGGGGGTTTTATTACG+TGG | - | chr7_3:34057774-34057793 | Msa1102090:intron | 45.0% |
| !! | TGATTTTGATCGTGTGGTGC+AGG | - | chr7_3:34057824-34057843 | Msa1102090:intron | 45.0% |
| TTGTGTTAGGCCTAACAGTG+GGG | - | chr7_3:34057872-34057891 | Msa1102090:intron | 45.0% | |
| AACAATGCAAGCGCAAAAGG+AGG | - | chr7_3:34058014-34058033 | Msa1102090:intron | 45.0% | |
| ACCTTCTGACATGCAATGCA+AGG | - | chr7_3:34058038-34058057 | Msa1102090:intron | 45.0% | |
| TCCTTGCATTGCATGTCAGA+AGG | + | chr7_3:34058042-34058061 | None:intergenic | 45.0% | |
| CAAAGTGTGATTGCAAGTCC+TGG | - | chr7_3:34058075-34058094 | Msa1102090:intron | 45.0% | |
| ATGCAGTTTAGCAAAGAGGC+AGG | - | chr7_3:34058226-34058245 | Msa1102090:intron | 45.0% | |
| GTTGTTTATGTTGCTCCTCC+CGG | - | chr7_3:34058277-34058296 | Msa1102090:intron | 45.0% | |
| TCATCAGATCCTTCTCGAAC+CGG | + | chr7_3:34058313-34058332 | None:intergenic | 45.0% | |
| ! | CCGTTTTCCGATACAGAATC+AGG | + | chr7_3:34058346-34058365 | None:intergenic | 45.0% |
| ACATCAGGGTCCTACATTTG+AGG | - | chr7_3:34058520-34058539 | Msa1102090:intron | 45.0% | |
| AAAGTGACGCATGCTGATGA+AGG | - | chr7_3:34058599-34058618 | Msa1102090:intron | 45.0% | |
| AAGGTAGAGACATCAACTGC+AGG | + | chr7_3:34059252-34059271 | None:intergenic | 45.0% | |
| ! | GCAGTTGATGTCTCTACCTT+TGG | - | chr7_3:34059252-34059271 | Msa1102090:intron | 45.0% |
| TCAAGTTTCAAAGGTGACCG+AGG | - | chr7_3:34059348-34059367 | Msa1102090:intron | 45.0% | |
| GATAGCAGAATTCCTCTCCT+CGG | + | chr7_3:34059368-34059387 | None:intergenic | 45.0% | |
| ! | TGAAGAGTTTGGGCTAGGTT+GGG | + | chr7_3:34059810-34059829 | None:intergenic | 45.0% |
| AACCTGGACCTGAAGAGTTT+GGG | + | chr7_3:34059820-34059839 | None:intergenic | 45.0% | |
| AAACCTGGACCTGAAGAGTT+TGG | + | chr7_3:34059821-34059840 | None:intergenic | 45.0% | |
| !! | TTTTGTGGGACTGGTAAACC+TGG | + | chr7_3:34059836-34059855 | None:intergenic | 45.0% |
| !!! | GTCCCTATTTTTTGTGGGAC+TGG | + | chr7_3:34059845-34059864 | None:intergenic | 45.0% |
| TGAGGCCACAGATAATAGGA+GGG | + | chr7_3:34060108-34060127 | None:intergenic | 45.0% | |
| ATGAGGCCACAGATAATAGG+AGG | + | chr7_3:34060109-34060128 | None:intergenic | 45.0% | |
| GAGTTAGGCGCTATATGATG+AGG | + | chr7_3:34060126-34060145 | None:intergenic | 45.0% | |
| !! | TCTACCCTGTTTTGAATGGG+GGG | + | chr7_3:34060346-34060365 | None:intergenic | 45.0% |
| !! | GTCTACCCTGTTTTGAATGG+GGG | + | chr7_3:34060347-34060366 | None:intergenic | 45.0% |
| !! | GGAGTCTACCCTGTTTTGAA+TGG | + | chr7_3:34060350-34060369 | None:intergenic | 45.0% |
| TACAAGATGGCAGGAGCTTA+GGG | + | chr7_3:34060371-34060390 | None:intergenic | 45.0% | |
| ATCAGTAGCTACAAGATGGC+AGG | + | chr7_3:34060380-34060399 | None:intergenic | 45.0% | |
| TTAGCGACAGAACTTCTACC+TGG | - | chr7_3:34060401-34060420 | Msa1102090:intron | 45.0% | |
| TAGCGACAGAACTTCTACCT+GGG | - | chr7_3:34060402-34060421 | Msa1102090:intron | 45.0% | |
| AGTTATGCGCGCCAGATAAT+GGG | + | chr7_3:34060435-34060454 | None:intergenic | 45.0% | |
| TCAGGGATACGGTGACATTT+CGG | + | chr7_3:34060571-34060590 | None:intergenic | 45.0% | |
| TCAAGAGAGAGTCAGGGATA+CGG | + | chr7_3:34060582-34060601 | None:intergenic | 45.0% | |
| CAAGCATCAAGAGAGAGTCA+GGG | + | chr7_3:34060588-34060607 | None:intergenic | 45.0% | |
| ACAAGCATCAAGAGAGAGTC+AGG | + | chr7_3:34060589-34060608 | None:intergenic | 45.0% | |
| TTTCACCCAACTTCATGGTG+GGG | - | chr7_3:34060656-34060675 | Msa1102090:intron | 45.0% | |
| GCTCTCAAGTTCTACAGTTG+TGG | - | chr7_3:34060696-34060715 | Msa1102090:intron | 45.0% | |
| AGTTCTACAGTTGTGGGACT+TGG | - | chr7_3:34060703-34060722 | Msa1102090:intron | 45.0% | |
| TGTCTGTGAGGGTAAAGATG+GGG | + | chr7_3:34060740-34060759 | None:intergenic | 45.0% | |
| GCTGAAACCAATAGCCAGAT+GGG | + | chr7_3:34060781-34060800 | None:intergenic | 45.0% | |
| AGCTGAAACCAATAGCCAGA+TGG | + | chr7_3:34060782-34060801 | None:intergenic | 45.0% | |
| TGGTTTCAGCTAAAGGGATG+GGG | - | chr7_3:34060791-34060810 | Msa1102090:CDS | 45.0% | |
| GAGTGAGGGAATACAAGCAA+GGG | + | chr7_3:34060892-34060911 | None:intergenic | 45.0% | |
| AGAGTGAGGGAATACAAGCA+AGG | + | chr7_3:34060893-34060912 | None:intergenic | 45.0% | |
| CATCTGCATCTCAAGAGTGA+GGG | + | chr7_3:34060906-34060925 | None:intergenic | 45.0% | |
| TCATCTGCATCTCAAGAGTG+AGG | + | chr7_3:34060907-34060926 | None:intergenic | 45.0% | |
| CAGATGAACGAGACTCTGAT+TGG | - | chr7_3:34060920-34060939 | Msa1102090:intron | 45.0% | |
| AGATCATCCAACATCCTCCT+AGG | + | chr7_3:34061093-34061112 | None:intergenic | 45.0% | |
| ! | TAGCATTGGGAGTAGAAGAG+GGG | + | chr7_3:34061173-34061192 | None:intergenic | 45.0% |
| ATCCTTGTGTTCCAATCCAG+TGG | - | chr7_3:34061198-34061217 | Msa1102090:intron | 45.0% | |
| !! | AAGGTCAGCTTAAGAGCACT+AGG | + | chr7_3:34061416-34061435 | None:intergenic | 45.0% |
| AATCAACGACCCAAGAACCA+AGG | + | chr7_3:34062088-34062107 | None:intergenic | 45.0% | |
| TCTACCTGAGGTAACTCTTC+TGG | + | chr7_3:34062599-34062618 | None:intergenic | 45.0% | |
| CCGCAATTTCAATCTACCTG+AGG | + | chr7_3:34062611-34062630 | None:intergenic | 45.0% | |
| ! | GCTTTTGGGCCTGTATACAA+AGG | - | chr7_3:34062742-34062761 | Msa1102090:intron | 45.0% |
| TTTGGGCCTGTATACAAAGG+TGG | - | chr7_3:34062745-34062764 | Msa1102090:intron | 45.0% | |
| CAATTCAGTGGCTTTCTGAG+AGG | + | chr7_3:34062983-34063002 | None:intergenic | 45.0% | |
| CATTGGGAGTTGCAAGAGTT+AGG | - | chr7_3:34063023-34063042 | Msa1102090:CDS | 45.0% | |
| TCACCTAGTGGTTAGTGGTA+GGG | + | chr7_3:34063146-34063165 | None:intergenic | 45.0% | |
| TTCACCTAGTGGTTAGTGGT+AGG | + | chr7_3:34063147-34063166 | None:intergenic | 45.0% | |
| CTATCTGTTGCACGAAATGG+AGG | - | chr7_3:34063277-34063296 | Msa1102090:intron | 45.0% | |
| CTCGGACTGAAATCTAAGTG+TGG | + | chr7_3:34063313-34063332 | None:intergenic | 45.0% | |
| TTCTTCCGCCTCAAGTTTGA+TGG | - | chr7_3:34063338-34063357 | Msa1102090:intron | 45.0% | |
| CGTGTCAAAACAAGGGCAAA+AGG | - | chr7_3:34063438-34063457 | Msa1102090:intron | 45.0% | |
| ACAAGGGCAAAAGGACTCTA+TGG | - | chr7_3:34063447-34063466 | Msa1102090:intron | 45.0% | |
| CACCGAACACTTAAGCTTTC+TGG | + | chr7_3:34063476-34063495 | None:intergenic | 45.0% | |
| AGAAACTTTGTCAACGCCAC+TGG | + | chr7_3:34063527-34063546 | None:intergenic | 45.0% | |
| ! | GGCTCTGATACCATGTTACA+TGG | + | chr7_3:34063684-34063703 | None:intergenic | 45.0% |
| TGTAACATGGTATCAGAGCC+GGG | - | chr7_3:34063684-34063703 | Msa1102090:intron | 45.0% | |
| GGAATGGAGTCACATTGCTA+AGG | - | chr7_3:34063763-34063782 | Msa1102090:intron | 45.0% | |
| AAGGTCATGTCCTCTTCAAG+AGG | + | chr7_3:34064382-34064401 | None:intergenic | 45.0% | |
| !!! | TTCAAATTTAATTTTAATTT+AGG | - | chr7_3:34057181-34057200 | Msa1102090:intron | 5.0% |
| !!! | TCAAATTTAATTTTAATTTA+GGG | - | chr7_3:34057182-34057201 | Msa1102090:intron | 5.0% |
| CAGCATTCTCATCACAGGTG+TGG | + | chr7_3:34055491-34055510 | None:intergenic | 50.0% | |
| TCTTCGATGATTGCGACGGT+GGG | - | chr7_3:34055535-34055554 | Msa1102090:three_prime_UTR | 50.0% | |
| TCCCTCCTCAGAATATCCTC+GGG | - | chr7_3:34055634-34055653 | Msa1102090:three_prime_UTR | 50.0% | |
| TAAGCCCCGAGGATATTCTG+AGG | + | chr7_3:34055642-34055661 | None:intergenic | 50.0% | |
| GTGAAATGAGGAGGTAGAGG+AGG | - | chr7_3:34055874-34055893 | Msa1102090:intron | 50.0% | |
| GATTCTTCGAGGGAGACGAA+CGG | - | chr7_3:34055920-34055939 | Msa1102090:intron | 50.0% | |
| CGTGAAGATTGTTGCAGTGG+AGG | - | chr7_3:34056180-34056199 | Msa1102090:intron | 50.0% | |
| CGTTACCAACGAGGGAAACT+CGG | + | chr7_3:34056884-34056903 | None:intergenic | 50.0% | |
| ! | CGAGTTTCCCTCGTTGGTAA+CGG | - | chr7_3:34056882-34056901 | Msa1102090:intron | 50.0% |
| !! | GAGATCGCTTTTCCTCTCTC+CGG | - | chr7_3:34056904-34056923 | Msa1102090:intron | 50.0% |
| GATCCACCAACCATGAGTAC+CGG | - | chr7_3:34056928-34056947 | Msa1102090:intron | 50.0% | |
| ! | GCTGATTCTCGGCAATATCG+AGG | - | chr7_3:34057298-34057317 | Msa1102090:intron | 50.0% |
| TGACAACTGATAACTGCCGC+AGG | + | chr7_3:34058184-34058203 | None:intergenic | 50.0% | |
| GGTTCGAGAAGGATCTGATG+AGG | - | chr7_3:34058312-34058331 | Msa1102090:intron | 50.0% | |
| TAACGAGCGGGATGAACATC+AGG | - | chr7_3:34058505-34058524 | Msa1102090:intron | 50.0% | |
| AACGAGCGGGATGAACATCA+GGG | - | chr7_3:34058506-34058525 | Msa1102090:intron | 50.0% | |
| GAGACATCAACTGCAGGCAA+TGG | + | chr7_3:34059246-34059265 | None:intergenic | 50.0% | |
| TTTCAAAGGTGACCGAGGAG+AGG | - | chr7_3:34059353-34059372 | Msa1102090:intron | 50.0% | |
| CTTGCTGGAGTCTTCTCTGT+TGG | + | chr7_3:34059393-34059412 | None:intergenic | 50.0% | |
| GAGAAGACTCCAGCAAGAAG+TGG | - | chr7_3:34059396-34059415 | Msa1102090:intron | 50.0% | |
| AAAGAACTCCCATTCCGTCC+TGG | - | chr7_3:34059781-34059800 | Msa1102090:intron | 50.0% | |
| ! | CTGAAGAGTTTGGGCTAGGT+TGG | + | chr7_3:34059811-34059830 | None:intergenic | 50.0% |
| CAACCTAGCCCAAACTCTTC+AGG | - | chr7_3:34059809-34059828 | Msa1102090:intron | 50.0% | |
| ATCTGCCCCCCATTCAAAAC+AGG | - | chr7_3:34060338-34060357 | Msa1102090:intron | 50.0% | |
| TCTGCCCCCCATTCAAAACA+GGG | - | chr7_3:34060339-34060358 | Msa1102090:intron | 50.0% | |
| CTACAAGATGGCAGGAGCTT+AGG | + | chr7_3:34060372-34060391 | None:intergenic | 50.0% | |
| AGCGACAGAACTTCTACCTG+GGG | - | chr7_3:34060403-34060422 | Msa1102090:intron | 50.0% | |
| CAGAACTTCTACCTGGGGAT+AGG | - | chr7_3:34060408-34060427 | Msa1102090:intron | 50.0% | |
| !! | AGATAATGGGACCTATCCCC+AGG | + | chr7_3:34060422-34060441 | None:intergenic | 50.0% |
| TGGGGATAGGTCCCATTATC+TGG | - | chr7_3:34060421-34060440 | Msa1102090:intron | 50.0% | |
| GAGTTATGCGCGCCAGATAA+TGG | + | chr7_3:34060436-34060455 | None:intergenic | 50.0% | |
| AGGGATACGGTGACATTTCG+GGG | + | chr7_3:34060569-34060588 | None:intergenic | 50.0% | |
| CAGGGATACGGTGACATTTC+GGG | + | chr7_3:34060570-34060589 | None:intergenic | 50.0% | |
| AGTTGCCCCACCATGAAGTT+GGG | + | chr7_3:34060664-34060683 | None:intergenic | 50.0% | |
| TAGTTGCCCCACCATGAAGT+TGG | + | chr7_3:34060665-34060684 | None:intergenic | 50.0% | |
| GTCTGTGAGGGTAAAGATGG+GGG | + | chr7_3:34060739-34060758 | None:intergenic | 50.0% | |
| CTCTGATTGGGATCGAAGTG+AGG | - | chr7_3:34060933-34060952 | Msa1102090:intron | 50.0% | |
| GTACGAGTCATACCACCACT+TGG | - | chr7_3:34061018-34061037 | Msa1102090:intron | 50.0% | |
| GCAAAACTTGGACCAAGTGG+TGG | + | chr7_3:34061033-34061052 | None:intergenic | 50.0% | |
| ! | AGCATTGGGAGTAGAAGAGG+GGG | + | chr7_3:34061172-34061191 | None:intergenic | 50.0% |
| ! | AGCCACTGGATTGGAACACA+AGG | + | chr7_3:34061203-34061222 | None:intergenic | 50.0% |
| CTCATAGGAAGCCACTGGAT+TGG | + | chr7_3:34061212-34061231 | None:intergenic | 50.0% | |
| CAATCCAGTGGCTTCCTATG+AGG | - | chr7_3:34061210-34061229 | Msa1102090:intron | 50.0% | |
| ! | CTCTAGTGGTGTCAGAGTAC+TGG | - | chr7_3:34062004-34062023 | Msa1102090:intron | 50.0% |
| !! | AGATTTAGCTTGAGGGGGAG+TGG | - | chr7_3:34062353-34062372 | Msa1102090:intron | 50.0% |
| CTCTCCAGAAGAGTTACCTC+AGG | - | chr7_3:34062592-34062611 | Msa1102090:intron | 50.0% | |
| ! | TTCAGTGGCTTTCTGAGAGG+AGG | + | chr7_3:34062980-34062999 | None:intergenic | 50.0% |
| GGAGAGGACACTAAATGGAG+AGG | + | chr7_3:34063051-34063070 | None:intergenic | 50.0% | |
| AGACCCTACCACTAACCACT+AGG | - | chr7_3:34063140-34063159 | Msa1102090:intron | 50.0% | |
| TGAGGCGGAAGAATGAGACT+CGG | + | chr7_3:34063331-34063350 | None:intergenic | 50.0% | |
| GTGGTTTCAGCGAAACGGAT+GGG | + | chr7_3:34063501-34063520 | None:intergenic | 50.0% | |
| AGTGGTTTCAGCGAAACGGA+TGG | + | chr7_3:34063502-34063521 | None:intergenic | 50.0% | |
| GGCTAGTGGTTTCAGCGAAA+CGG | + | chr7_3:34063506-34063525 | None:intergenic | 50.0% | |
| ACTGAGAATCCAAGGCGTGA+GGG | - | chr7_3:34063732-34063751 | Msa1102090:intron | 50.0% | |
| TTTGCACACAGGAGCTCTTG+AGG | - | chr7_3:34064276-34064295 | Msa1102090:intron | 50.0% | |
| GTCTTCGATGATTGCGACGG+TGG | - | chr7_3:34055534-34055553 | Msa1102090:three_prime_UTR | 55.0% | |
| CTTCGATGATTGCGACGGTG+GGG | - | chr7_3:34055536-34055555 | Msa1102090:three_prime_UTR | 55.0% | |
| ATACGATCGTGGCGACGAGA+TGG | - | chr7_3:34055599-34055618 | Msa1102090:three_prime_UTR | 55.0% | |
| ! | CCCCGAGGATATTCTGAGGA+GGG | + | chr7_3:34055638-34055657 | None:intergenic | 55.0% |
| CCCTCCTCAGAATATCCTCG+GGG | - | chr7_3:34055635-34055654 | Msa1102090:three_prime_UTR | 55.0% | |
| GAGGAGGTAGAGGAGGATTC+TGG | - | chr7_3:34055881-34055900 | Msa1102090:intron | 55.0% | |
| ! | AGAGGTATGAGCTGTGCTCG+AGG | + | chr7_3:34056859-34056878 | None:intergenic | 55.0% |
| AACGAGGGAAACTCGGAGAG+AGG | + | chr7_3:34056877-34056896 | None:intergenic | 55.0% | |
| TCTCTCCGAGTTTCCCTCGT+TGG | - | chr7_3:34056876-34056895 | Msa1102090:intron | 55.0% | |
| GCGATCTCCGTTACCAACGA+GGG | + | chr7_3:34056892-34056911 | None:intergenic | 55.0% | |
| AGCGATCTCCGTTACCAACG+AGG | + | chr7_3:34056893-34056912 | None:intergenic | 55.0% | |
| !! | ACTCATGGTTGGTGGATCGC+CGG | + | chr7_3:34056926-34056945 | None:intergenic | 55.0% |
| GGCAACACAACCCCACTGTT+AGG | + | chr7_3:34057885-34057904 | None:intergenic | 55.0% | |
| GATCCTTCTCGAACCGGAGA+CGG | + | chr7_3:34058307-34058326 | None:intergenic | 55.0% | |
| TGCAGGCAATGGAGTCTGCA+AGG | + | chr7_3:34059235-34059254 | None:intergenic | 55.0% | |
| TTGGGTCACCAGGACGGAAT+GGG | + | chr7_3:34059792-34059811 | None:intergenic | 55.0% | |
| GGACCTGAAGAGTTTGGGCT+AGG | + | chr7_3:34059815-34059834 | None:intergenic | 55.0% | |
| AGCCCAAACTCTTCAGGTCC+AGG | - | chr7_3:34059815-34059834 | Msa1102090:intron | 55.0% | |
| TGACATTTCGGGGCCATCCT+AGG | + | chr7_3:34060559-34060578 | None:intergenic | 55.0% | |
| TGAGGGTAAAGATGGGGGCA+GGG | + | chr7_3:34060734-34060753 | None:intergenic | 55.0% | |
| ATTGGGAGTAGAAGAGGGGG+TGG | + | chr7_3:34061169-34061188 | None:intergenic | 55.0% | |
| TCCAGTGGCTTCCTATGAGG+AGG | - | chr7_3:34061213-34061232 | Msa1102090:intron | 55.0% | |
| TCCTCCTCATAGGAAGCCAC+TGG | + | chr7_3:34061217-34061236 | None:intergenic | 55.0% | |
| !! | TTGAAATTGCGGGGTGCCGT+AGG | - | chr7_3:34062619-34062638 | Msa1102090:intron | 55.0% |
| TCGCTGAAACCACTAGCCAG+TGG | - | chr7_3:34063508-34063527 | Msa1102090:intron | 55.0% | |
| ! | TTGTCAACGCCACTGGCTAG+TGG | + | chr7_3:34063520-34063539 | None:intergenic | 55.0% |
| GACTGAGAATCCAAGGCGTG+AGG | - | chr7_3:34063731-34063750 | Msa1102090:intron | 55.0% | |
| AGAATCCAAGGCGTGAGGGT+GGG | - | chr7_3:34063736-34063755 | Msa1102090:intron | 55.0% | |
| CGTGAGGGTGGGAATTGGAA+TGG | - | chr7_3:34063747-34063766 | Msa1102090:intron | 55.0% | |
| ! | CACCACGGCTTCTACTGACT+TGG | + | chr7_3:34064304-34064323 | None:intergenic | 55.0% |
| CAAGTCAGTAGAAGCCGTGG+TGG | - | chr7_3:34064302-34064321 | Msa1102090:intron | 55.0% | |
| ! | GCCCCGAGGATATTCTGAGG+AGG | + | chr7_3:34055639-34055658 | None:intergenic | 60.0% |
| CGAAGCAAGAGTAAGCCCCG+AGG | + | chr7_3:34055653-34055672 | None:intergenic | 60.0% | |
| CGGGGCTTACTCTTGCTTCG+TGG | - | chr7_3:34055653-34055672 | Msa1102090:three_prime_UTR | 60.0% | |
| TCTTCGAGGGAGACGAACGG+TGG | - | chr7_3:34055923-34055942 | Msa1102090:intron | 60.0% | |
| TCGCCGGTACTCATGGTTGG+TGG | + | chr7_3:34056934-34056953 | None:intergenic | 60.0% | |
| AGGTCGCCGGTACTCATGGT+TGG | + | chr7_3:34056937-34056956 | None:intergenic | 60.0% | |
| GAGAAGGTCGCCGGTACTCA+TGG | + | chr7_3:34056941-34056960 | None:intergenic | 60.0% | |
| ACAGTGGGGTTGTGTTGCCG+AGG | - | chr7_3:34057886-34057905 | Msa1102090:intron | 60.0% | |
| GTTGGGTCACCAGGACGGAA+TGG | + | chr7_3:34059793-34059812 | None:intergenic | 60.0% | |
| ! | GCTAGGTTGGGTCACCAGGA+CGG | + | chr7_3:34059798-34059817 | None:intergenic | 60.0% |
| ! | TTGGGCTAGGTTGGGTCACC+AGG | + | chr7_3:34059802-34059821 | None:intergenic | 60.0% |
| GGTAAAGATGGGGGCAGGGA+TGG | + | chr7_3:34060730-34060749 | None:intergenic | 60.0% | |
| GTGAGGGTAAAGATGGGGGC+AGG | + | chr7_3:34060735-34060754 | None:intergenic | 60.0% | |
| GAGAATCCAAGGCGTGAGGG+TGG | - | chr7_3:34063735-34063754 | Msa1102090:intron | 60.0% | |
| CAATTCCCACCCTCACGCCT+TGG | + | chr7_3:34063744-34063763 | None:intergenic | 60.0% | |
| CAAGGCGTGAGGGTGGGAAT+TGG | - | chr7_3:34063742-34063761 | Msa1102090:intron | 60.0% | |
| CGCCAAGTCAGTAGAAGCCG+TGG | - | chr7_3:34064299-34064318 | Msa1102090:intron | 60.0% | |
| CGATGATTGCGACGGTGGGG+AGG | - | chr7_3:34055539-34055558 | Msa1102090:three_prime_UTR | 65.0% | |
| TCGAGGGAGACGAACGGTGG+TGG | - | chr7_3:34055926-34055945 | Msa1102090:intron | 65.0% | |
| ! | GTTGGTGGATCGCCGGAGAG+AGG | + | chr7_3:34056919-34056938 | None:intergenic | 65.0% |
| TCGAACCGGAGACGGAGGTC+CGG | + | chr7_3:34058299-34058318 | None:intergenic | 65.0% | |
| CCTTCTCGAACCGGAGACGG+AGG | + | chr7_3:34058304-34058323 | None:intergenic | 65.0% | |
| ! | CCTCCGTCTCCGGTTCGAGA+AGG | - | chr7_3:34058301-34058320 | Msa1102090:intron | 65.0% |
| TCCTCCCGGACCTCCGTCTC+CGG | - | chr7_3:34058291-34058310 | Msa1102090:intron | 70.0% | |
| CGAACCGGAGACGGAGGTCC+GGG | + | chr7_3:34058298-34058317 | None:intergenic | 70.0% | |
| ACCGGAGACGGAGGTCCGGG+AGG | + | chr7_3:34058295-34058314 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 34055483 | 34064675 | 34055483 | ID=Msa1102090;Name=Msa1102090 |
| chr7_3 | mRNA | 34055483 | 34064675 | 34055483 | ID=Msa1102090-mRNA-1;Parent=Msa1102090;Name=Msa1102090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.87|0.77|0.88|1|1|9|278|339 |
| chr7_3 | exon | 34055483 | 34055871 | 34055483 | ID=Msa1102090-mRNA-1:exon:7273;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34060741 | 34060818 | 34060741 | ID=Msa1102090-mRNA-1:exon:7272;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34061617 | 34061667 | 34061617 | ID=Msa1102090-mRNA-1:exon:7271;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34061765 | 34061926 | 34061765 | ID=Msa1102090-mRNA-1:exon:7270;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34062030 | 34062145 | 34062030 | ID=Msa1102090-mRNA-1:exon:7269;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34062231 | 34062312 | 34062231 | ID=Msa1102090-mRNA-1:exon:7268;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34062997 | 34063067 | 34062997 | ID=Msa1102090-mRNA-1:exon:7267;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34063167 | 34063290 | 34063167 | ID=Msa1102090-mRNA-1:exon:7266;Parent=Msa1102090-mRNA-1 |
| chr7_3 | exon | 34064451 | 34064675 | 34064451 | ID=Msa1102090-mRNA-1:exon:7265;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34064451 | 34064675 | 34064451 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34063167 | 34063290 | 34063167 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34062997 | 34063067 | 34062997 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34062231 | 34062312 | 34062231 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34062030 | 34062145 | 34062030 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34061765 | 34061926 | 34061765 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34061617 | 34061667 | 34061617 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34060741 | 34060818 | 34060741 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | CDS | 34055761 | 34055871 | 34055761 | ID=Msa1102090-mRNA-1:cds;Parent=Msa1102090-mRNA-1 |
| chr7_3 | three_prime_UTR | 34055483 | 34055760 | 34055483 | ID=Msa1102090-mRNA-1:three_prime_utr;Parent=Msa1102090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
