Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080410 | XP_013450128.1 | 90.947 | 243 | 3 | 1 | 1 | 224 | 1 | 243 | 1.22e-157 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080410 | sp|Q9SJF3|DCP1_ARATH | 60.648 | 216 | 58 | 5 | 1 | 194 | 1 | 211 | 5.17e-80 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080410 | A0A072U465 | 90.947 | 243 | 3 | 1 | 1 | 224 | 1 | 243 | 5.85e-158 | 451 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1080410 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0078000 | Msa1080410 | 0.816065 | 6.700290e-52 | -8.615850e-47 |
| Msa0618200 | Msa1080410 | 0.823365 | 1.440643e-53 | -8.615850e-47 |
| Msa0705600 | Msa1080410 | -0.808292 | 3.328059e-50 | -8.615850e-47 |
| Msa0707390 | Msa1080410 | -0.806405 | 8.358303e-50 | -8.615850e-47 |
| Msa0784860 | Msa1080410 | -0.801511 | 8.700775e-49 | -8.615850e-47 |
| Msa0795030 | Msa1080410 | -0.807042 | 6.133105e-50 | -8.615850e-47 |
| Msa0830990 | Msa1080410 | -0.801346 | 9.404316e-49 | -8.615850e-47 |
| Msa0182280 | Msa1080410 | -0.810759 | 9.823472e-51 | -8.615850e-47 |
| Msa0183460 | Msa1080410 | -0.814098 | 1.831625e-51 | -8.615850e-47 |
| Msa0186310 | Msa1080410 | -0.801633 | 8.212162e-49 | -8.615850e-47 |
| Msa0387910 | Msa1080410 | -0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0436190 | Msa1080410 | -0.800246 | 1.576690e-48 | -8.615850e-47 |
| Msa1002600 | Msa1080410 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa1028470 | Msa1080410 | 0.818177 | 2.245583e-52 | -8.615850e-47 |
| Msa1069660 | Msa1080410 | 0.823578 | 1.284652e-53 | -8.615850e-47 |
| Msa1080410 | Msa1098720 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa1080410 | Msa1126120 | 0.934809 | 2.268976e-96 | -8.615850e-47 |
| Msa1080410 | Msa1452470 | -0.803113 | 4.070437e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080410 | MtrunA17_Chr7g0266741 | 90.947 | 243 | 3 | 1 | 1 | 224 | 1 | 243 | 3.65e-161 | 448 |
| Msa1080410 | MtrunA17_Chr2g0321701 | 53.506 | 271 | 87 | 8 | 1 | 233 | 1 | 270 | 4.37e-86 | 260 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080410 | AT1G08370.1 | 60.648 | 216 | 58 | 5 | 1 | 194 | 1 | 211 | 5.26e-81 | 247 |
Find 76 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGATAGCGCTTTCATTTA+TGG | 0.005436 | 7_2:-79862301 | None:intergenic |
| TCTATATAATATTTGGATTT+TGG | 0.118443 | 7_2:+79864334 | Msa1080410:three_prime_UTR |
| GCAACTTCTTCACATTCTTC+TGG | 0.263869 | 7_2:-79861296 | None:intergenic |
| TTCAACATTTGTATCTTAAG+AGG | 0.279763 | 7_2:+79864579 | Msa1080410:three_prime_UTR |
| TCACAACTTTGCATATCTTT+TGG | 0.285584 | 7_2:+79863952 | Msa1080410:three_prime_UTR |
| TTTGAACAACTCTCATGTTT+AGG | 0.299526 | 7_2:+79864453 | Msa1080410:three_prime_UTR |
| CACAAGAAGTTAATGGTATA+TGG | 0.308647 | 7_2:+79861264 | Msa1080410:CDS |
| GTAGAAGGTGTTTGAATAGA+AGG | 0.309767 | 7_2:-79862635 | None:intergenic |
| TAATCTGGTGGAGAATCTTT+TGG | 0.319672 | 7_2:+79861193 | Msa1080410:CDS |
| AAGTTGCAAATCTCTTTAAT+AGG | 0.325477 | 7_2:+79861312 | Msa1080410:CDS |
| TAAGAAATTAACGCCGAATC+TGG | 0.328751 | 7_2:+79860134 | Msa1080410:CDS |
| GATATGTCGTGCAAGAGTTT+TGG | 0.329193 | 7_2:+79864386 | Msa1080410:three_prime_UTR |
| TTGCAGACATGTAAGATTAC+TGG | 0.329440 | 7_2:+79862521 | Msa1080410:intron |
| TATGCATCTTCAATAATGTT+TGG | 0.333689 | 7_2:-79863765 | None:intergenic |
| TTGACGGTGTATTGCGGAAT+CGG | 0.335807 | 7_2:-79863975 | None:intergenic |
| TTCGATGTTGAAATCATAGA+AGG | 0.353357 | 7_2:-79860247 | None:intergenic |
| TACAAATGTTGAATTGATCT+TGG | 0.354155 | 7_2:-79864569 | None:intergenic |
| TATAAACTTAGTTCTGTATA+TGG | 0.363402 | 7_2:+79863830 | Msa1080410:three_prime_UTR |
| TATCCTCTGTAGTGAGTTTG+AGG | 0.369066 | 7_2:+79862260 | Msa1080410:intron |
| GATCTCTGTTTGTTGTTAAG+AGG | 0.370124 | 7_2:+79860301 | Msa1080410:CDS |
| AAAAGCCATACTTGTTATAT+CGG | 0.374988 | 7_2:+79861234 | Msa1080410:CDS |
| GCATTCCGATATAACAAGTA+TGG | 0.382162 | 7_2:-79861239 | None:intergenic |
| CTTTCTACATTTGAAGCATA+AGG | 0.385566 | 7_2:-79862545 | None:intergenic |
| AGTGTCACTTCTACTGTTCC+TGG | 0.391693 | 7_2:+79862593 | Msa1080410:CDS |
| TTCACCAAATGAATCGAGTT+AGG | 0.397814 | 7_2:+79859970 | Msa1080410:five_prime_UTR |
| AATGCGTCACAAGAAGTTAA+TGG | 0.399188 | 7_2:+79861257 | Msa1080410:CDS |
| AGAAAGTTGTCAGAAGTAGT+TGG | 0.405905 | 7_2:+79864532 | Msa1080410:three_prime_UTR |
| GTTTATTATGACAGATAATC+TGG | 0.406670 | 7_2:+79861178 | Msa1080410:intron |
| AAAACCTAACTCGATTCATT+TGG | 0.407061 | 7_2:-79859974 | None:intergenic |
| TTCAGTTTATTGTGATGAAT+CGG | 0.436878 | 7_2:+79860422 | Msa1080410:CDS |
| TGCAACAAGTCTTAAGAACT+TGG | 0.438501 | 7_2:+79864644 | Msa1080410:three_prime_UTR |
| GTGATGAATCGGCGAAATAC+AGG | 0.457248 | 7_2:+79860433 | Msa1080410:CDS |
| TAGAAGTGAAGTACTTCAAA+CGG | 0.489362 | 7_2:-79864182 | None:intergenic |
| ATTGTTTCGAGAGAGGTAGA+AGG | 0.499455 | 7_2:-79862650 | None:intergenic |
| ATTAATGCACTATAATTTGA+CGG | 0.505767 | 7_2:-79863991 | None:intergenic |
| GTGCTGTGTTGATCCAGATT+CGG | 0.508965 | 7_2:-79860147 | None:intergenic |
| AGTAATCGAACATCAAAGGT+TGG | 0.509059 | 7_2:+79863795 | Msa1080410:exon |
| TCAAAGGTGTTGTTCAAAAG+TGG | 0.512779 | 7_2:-79864435 | None:intergenic |
| TCAACATTTGTATCTTAAGA+GGG | 0.521860 | 7_2:+79864580 | Msa1080410:three_prime_UTR |
| AAGAGAATCTCATCGATGAA+TGG | 0.522363 | 7_2:-79860207 | None:intergenic |
| GTAATCGAACATCAAAGGTT+GGG | 0.522743 | 7_2:+79863796 | Msa1080410:three_prime_UTR |
| AGTGACACTTGCAGAATGGT+AGG | 0.526966 | 7_2:-79862579 | None:intergenic |
| TATGTATACGTGGATAGTAA+TGG | 0.529487 | 7_2:+79864042 | Msa1080410:three_prime_UTR |
| AAGATATGCAAAGTTGTGAC+AGG | 0.531065 | 7_2:-79863948 | None:intergenic |
| TGCACGACATATCCTTTGCA+TGG | 0.535756 | 7_2:-79864376 | None:intergenic |
| ACTTGACTCGAGAGAAGAAG+AGG | 0.539005 | 7_2:-79860065 | None:intergenic |
| CATACATAAATTCAAAGGTA+AGG | 0.541492 | 7_2:-79864023 | None:intergenic |
| CGATGAATGGATCCATGCGT+TGG | 0.548724 | 7_2:-79860194 | None:intergenic |
| TGGAGTCGCAAAGATGTTGA+AGG | 0.549697 | 7_2:+79860279 | Msa1080410:CDS |
| CACTTGCAGAATGGTAGGGC+TGG | 0.552392 | 7_2:-79862574 | None:intergenic |
| GGTGTTTGAATAGAAGGTAC+AGG | 0.557030 | 7_2:-79862629 | None:intergenic |
| CATGAGTAATCGAACATCAA+AGG | 0.562148 | 7_2:+79863791 | Msa1080410:exon |
| TCTCACTGTGCTCCAACGCA+TGG | 0.564162 | 7_2:+79860182 | Msa1080410:CDS |
| AACAATCAACAGTGGCACTC+AGG | 0.575651 | 7_2:+79862667 | Msa1080410:CDS |
| TTTCATTTATGGTTGACACT+TGG | 0.575948 | 7_2:-79862290 | None:intergenic |
| TCTTCAGGAATGCTCAACCT+CGG | 0.578448 | 7_2:+79860398 | Msa1080410:intron |
| GTCACTTCTACTGTTCCTGG+TGG | 0.580303 | 7_2:+79862596 | Msa1080410:CDS |
| TAAACATGAGAGTTGTTCAA+AGG | 0.590886 | 7_2:-79864451 | None:intergenic |
| TATAATTTGACGGTGTATTG+CGG | 0.591079 | 7_2:-79863981 | None:intergenic |
| ACTGTTGATTGTTTCGAGAG+AGG | 0.591093 | 7_2:-79862657 | None:intergenic |
| AGTCATAAGCATCCATGCAA+AGG | 0.591392 | 7_2:+79864364 | Msa1080410:three_prime_UTR |
| TAGAAGTGACACTTGCAGAA+TGG | 0.593469 | 7_2:-79862583 | None:intergenic |
| GTATACATACATAAATTCAA+AGG | 0.595488 | 7_2:-79864028 | None:intergenic |
| GTGACACTTGCAGAATGGTA+GGG | 0.619158 | 7_2:-79862578 | None:intergenic |
| AAGTTACACAAAACATGCCA+TGG | 0.619895 | 7_2:-79863881 | None:intergenic |
| GCAACAAGTCTTAAGAACTT+GGG | 0.620998 | 7_2:+79864645 | Msa1080410:three_prime_UTR |
| GATAGTAATGGAAGAAAACA+AGG | 0.622478 | 7_2:+79864054 | Msa1080410:three_prime_UTR |
| ATCACAATAAACTGAAACCG+AGG | 0.625725 | 7_2:-79860415 | None:intergenic |
| CATGGTCGAGTCAGATGTGT+TGG | 0.626123 | 7_2:-79863863 | None:intergenic |
| CAACACATCTGACTCGACCA+TGG | 0.636208 | 7_2:+79863864 | Msa1080410:three_prime_UTR |
| TGAATTTATGTATGTATACG+TGG | 0.643336 | 7_2:+79864032 | Msa1080410:three_prime_UTR |
| ATCATAGAAGGAAACATGTG+CGG | 0.658586 | 7_2:-79860235 | None:intergenic |
| TATTATGACAGATAATCTGG+TGG | 0.659213 | 7_2:+79861181 | Msa1080410:intron |
| TCAACATCGAAACTAATCAG+TGG | 0.683579 | 7_2:+79860259 | Msa1080410:CDS |
| ATAGAAGGAAACATGTGCGG+CGG | 0.692025 | 7_2:-79860232 | None:intergenic |
| TCTCTCGAAACAATCAACAG+TGG | 0.738817 | 7_2:+79862659 | Msa1080410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTAAATAATTTTAAT+TGG | + | chr7_2:79864081-79864100 | Msa1080410:three_prime_UTR | 0.0% |
| !! | TGGATAATTAAATATATTAA+AGG | - | chr7_2:79863014-79863033 | None:intergenic | 10.0% |
| !! | TATATATATTAGTAGCAAAT+AGG | - | chr7_2:79861617-79861636 | None:intergenic | 15.0% |
| !!! | TGATTCTATTTTGAAATATT+TGG | + | chr7_2:79861784-79861803 | Msa1080410:intron | 15.0% |
| !! | GATAAAAATATTCATTGAAA+AGG | + | chr7_2:79862103-79862122 | Msa1080410:intron | 15.0% |
| !! | TTCTAACAATTAAAGATAAA+TGG | - | chr7_2:79863096-79863115 | None:intergenic | 15.0% |
| !! | CTTTAATTGTTAGAAAAATA+TGG | + | chr7_2:79863101-79863120 | Msa1080410:intron | 15.0% |
| !!! | AGTACTATTTTTAATGTATT+TGG | - | chr7_2:79863256-79863275 | None:intergenic | 15.0% |
| !! | AAATCTTAATATCAATAGTT+TGG | - | chr7_2:79863322-79863341 | None:intergenic | 15.0% |
| !!! | TAGGTTTTCTATATAATATT+TGG | + | chr7_2:79864327-79864346 | Msa1080410:intron | 15.0% |
| !!! | TCTATATAATATTTGGATTT+TGG | + | chr7_2:79864334-79864353 | Msa1080410:three_prime_UTR | 15.0% |
| !!! | TACTTCGATTTGTATATAAT+TGG | + | chr7_2:79860350-79860369 | Msa1080410:intron | 20.0% |
| !! | AAACACTATAATTTCAACAA+CGG | - | chr7_2:79860481-79860500 | None:intergenic | 20.0% |
| !!! | TGTTTTTCAGATTTGTTATA+AGG | + | chr7_2:79860496-79860515 | Msa1080410:intron | 20.0% |
| !!! | CAACATTTTATACTACTTAA+TGG | - | chr7_2:79861479-79861498 | None:intergenic | 20.0% |
| !! | TAAGTAGTATAAAATGTTGT+CGG | + | chr7_2:79861480-79861499 | Msa1080410:intron | 20.0% |
| !! | TAAAATCTTAAGTGTAAGTT+TGG | + | chr7_2:79861737-79861756 | Msa1080410:intron | 20.0% |
| !!! | CTTTAGAATCATTAACATAT+AGG | - | chr7_2:79862043-79862062 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTATTCTGTATG+TGG | + | chr7_2:79862068-79862087 | Msa1080410:intron | 20.0% |
| !!! | CTTTTTATAATTTTTGCTGA+TGG | - | chr7_2:79863034-79863053 | None:intergenic | 20.0% |
| !!! | TATAAACTTAGTTCTGTATA+TGG | + | chr7_2:79863830-79863849 | Msa1080410:three_prime_UTR | 20.0% |
| !! | ATTAATGCACTATAATTTGA+CGG | - | chr7_2:79863994-79864013 | None:intergenic | 20.0% |
| !! | GTATACATACATAAATTCAA+AGG | - | chr7_2:79864031-79864050 | None:intergenic | 20.0% |
| !!! | TTCTTTTTCTCTCTTTTTAT+TGG | - | chr7_2:79864516-79864535 | None:intergenic | 20.0% |
| !! | GTAAAAAAATAAATTGTGAG+TGG | - | chr7_2:79864616-79864635 | None:intergenic | 20.0% |
| ! | TTCAGTTTATTGTGATGAAT+CGG | + | chr7_2:79860422-79860441 | Msa1080410:CDS | 25.0% |
| !!! | TTCAGATTTGTTATAAGGAT+CGG | + | chr7_2:79860501-79860520 | Msa1080410:intron | 25.0% |
| ! | TCAACAATAACAAGTTCTTT+AGG | - | chr7_2:79860573-79860592 | None:intergenic | 25.0% |
| !! | GATTGATAATTGAATGAAAG+TGG | + | chr7_2:79860653-79860672 | Msa1080410:intron | 25.0% |
| !!! | CAATGAATTATTTTACTGTG+TGG | + | chr7_2:79860781-79860800 | Msa1080410:intron | 25.0% |
| ! | ACATAGAAAGTAATCAAGTA+GGG | - | chr7_2:79861155-79861174 | None:intergenic | 25.0% |
| ! | GTTTATTATGACAGATAATC+TGG | + | chr7_2:79861178-79861197 | Msa1080410:intron | 25.0% |
| !!! | AAAAGCCATACTTGTTATAT+CGG | + | chr7_2:79861234-79861253 | Msa1080410:CDS | 25.0% |
| ! | AAGTTGCAAATCTCTTTAAT+AGG | + | chr7_2:79861312-79861331 | Msa1080410:CDS | 25.0% |
| ! | AAGTAGTATAAAATGTTGTC+GGG | + | chr7_2:79861481-79861500 | Msa1080410:intron | 25.0% |
| !!! | TGATTATGTCACATTGATTT+TGG | - | chr7_2:79861977-79861996 | None:intergenic | 25.0% |
| ! | TTATGATTATATGATGTCTC+TGG | + | chr7_2:79862473-79862492 | Msa1080410:intron | 25.0% |
| ! | TATTAATGGTAATAAGGAGT+TGG | - | chr7_2:79862729-79862748 | None:intergenic | 25.0% |
| !!! | ACTAGTTCATTTATTTTGTG+TGG | + | chr7_2:79863159-79863178 | Msa1080410:intron | 25.0% |
| !!! | CTAGTTCATTTATTTTGTGT+GGG | + | chr7_2:79863160-79863179 | Msa1080410:intron | 25.0% |
| !! | TTATTCAGTTACGTTTTTGA+GGG | + | chr7_2:79863195-79863214 | Msa1080410:intron | 25.0% |
| ! | TTCATAAAATCCTTCCTTTA+TGG | - | chr7_2:79863408-79863427 | None:intergenic | 25.0% |
| !! | GAAGGATTTTATGAATTTGA+TGG | + | chr7_2:79863413-79863432 | Msa1080410:intron | 25.0% |
| !!! | TTTTTGTTTTACCATTTGTG+TGG | + | chr7_2:79863588-79863607 | Msa1080410:intron | 25.0% |
| ! | ACAAGAAAATATCGTTATCA+GGG | - | chr7_2:79863714-79863733 | None:intergenic | 25.0% |
| ! | TATGCATCTTCAATAATGTT+TGG | - | chr7_2:79863768-79863787 | None:intergenic | 25.0% |
| ! | CATACATAAATTCAAAGGTA+AGG | - | chr7_2:79864026-79864045 | None:intergenic | 25.0% |
| ! | TGAATTTATGTATGTATACG+TGG | + | chr7_2:79864032-79864051 | Msa1080410:three_prime_UTR | 25.0% |
| ! | ATCATAGAAATTGCCATATA+TGG | + | chr7_2:79864216-79864235 | Msa1080410:intron | 25.0% |
| ! | GAACATTATTCAACCATATA+TGG | - | chr7_2:79864232-79864251 | None:intergenic | 25.0% |
| ! | TACAAATGTTGAATTGATCT+TGG | - | chr7_2:79864572-79864591 | None:intergenic | 25.0% |
| ! | TTCAACATTTGTATCTTAAG+AGG | + | chr7_2:79864579-79864598 | Msa1080410:three_prime_UTR | 25.0% |
| ! | TCAACATTTGTATCTTAAGA+GGG | + | chr7_2:79864580-79864599 | Msa1080410:three_prime_UTR | 25.0% |
| AAAACCTAACTCGATTCATT+TGG | - | chr7_2:79859977-79859996 | None:intergenic | 30.0% | |
| TTCGATGTTGAAATCATAGA+AGG | - | chr7_2:79860250-79860269 | None:intergenic | 30.0% | |
| ! | TGTTTTATAGCTAGCTATAG+TGG | + | chr7_2:79860887-79860906 | Msa1080410:intron | 30.0% |
| GTTATTTAATACAGCTGTAG+TGG | + | chr7_2:79861030-79861049 | Msa1080410:intron | 30.0% | |
| ! | AGGTTTGTTCTAATTCAGTA+AGG | - | chr7_2:79861072-79861091 | None:intergenic | 30.0% |
| CACATAGAAAGTAATCAAGT+AGG | - | chr7_2:79861156-79861175 | None:intergenic | 30.0% | |
| TATTATGACAGATAATCTGG+TGG | + | chr7_2:79861181-79861200 | Msa1080410:intron | 30.0% | |
| CACAAGAAGTTAATGGTATA+TGG | + | chr7_2:79861264-79861283 | Msa1080410:CDS | 30.0% | |
| TTACGAAAAGCAGAAAATAG+AGG | - | chr7_2:79861558-79861577 | None:intergenic | 30.0% | |
| AGAATCCTGCAAATTTGATT+CGG | - | chr7_2:79861645-79861664 | None:intergenic | 30.0% | |
| !! | AATTTTACCTCCTCTAAAAG+TGG | - | chr7_2:79861765-79861784 | None:intergenic | 30.0% |
| GAGGTAAAGTGATTTATGTT+TGG | - | chr7_2:79861940-79861959 | None:intergenic | 30.0% | |
| ATCATTAACATATAGGCAAC+TGG | - | chr7_2:79862036-79862055 | None:intergenic | 30.0% | |
| AGTTTGAACAAGCAAATCAA+TGG | - | chr7_2:79862143-79862162 | None:intergenic | 30.0% | |
| AAATGACTTATAAAGCAGCT+TGG | - | chr7_2:79862213-79862232 | None:intergenic | 30.0% | |
| TTTCATTTATGGTTGACACT+TGG | - | chr7_2:79862293-79862312 | None:intergenic | 30.0% | |
| TGCATAAGTATTCAGCAAAA+AGG | - | chr7_2:79862425-79862444 | None:intergenic | 30.0% | |
| !! | TGCAATGTCAATTTCAAGTT+TGG | + | chr7_2:79862441-79862460 | Msa1080410:intron | 30.0% |
| ! | CTTTCTACATTTGAAGCATA+AGG | - | chr7_2:79862548-79862567 | None:intergenic | 30.0% |
| AGGTGGTATTAATGGTAATA+AGG | - | chr7_2:79862735-79862754 | None:intergenic | 30.0% | |
| GAAGAAATAGGTGGTATTAA+TGG | - | chr7_2:79862743-79862762 | None:intergenic | 30.0% | |
| TAAAACAGTCAACTAGTAGA+AGG | - | chr7_2:79862968-79862987 | None:intergenic | 30.0% | |
| !!! | TTCATTTATTTTGTGTGGGA+GGG | + | chr7_2:79863164-79863183 | Msa1080410:intron | 30.0% |
| ! | GTTATTCAGTTACGTTTTTG+AGG | + | chr7_2:79863194-79863213 | Msa1080410:intron | 30.0% |
| !! | TATTCAGTTACGTTTTTGAG+GGG | + | chr7_2:79863196-79863215 | Msa1080410:intron | 30.0% |
| GTATTTGGAAAAGCTTCATT+GGG | - | chr7_2:79863241-79863260 | None:intergenic | 30.0% | |
| TGTATTTGGAAAAGCTTCAT+TGG | - | chr7_2:79863242-79863261 | None:intergenic | 30.0% | |
| ! | CAGATCTCTCTTAATTTTGT+TGG | - | chr7_2:79863361-79863380 | None:intergenic | 30.0% |
| AATTAAGAGAGATCTGTGAT+TGG | + | chr7_2:79863365-79863384 | Msa1080410:intron | 30.0% | |
| ATTAAGAGAGATCTGTGATT+GGG | + | chr7_2:79863366-79863385 | Msa1080410:intron | 30.0% | |
| ! | CGTTCTATTTTGTAACAAGA+TGG | - | chr7_2:79863534-79863553 | None:intergenic | 30.0% |
| ACAAAATAGAACGTCAGTAT+AGG | + | chr7_2:79863541-79863560 | Msa1080410:intron | 30.0% | |
| CAAAATAGAACGTCAGTATA+GGG | + | chr7_2:79863542-79863561 | Msa1080410:intron | 30.0% | |
| GAAATACCAGAACAAAAACT+TGG | - | chr7_2:79863621-79863640 | None:intergenic | 30.0% | |
| GAAATACCAGAACAAAAACT+TGG | - | chr7_2:79863621-79863640 | None:intergenic | 30.0% | |
| CACAAGAAAATATCGTTATC+AGG | - | chr7_2:79863715-79863734 | None:intergenic | 30.0% | |
| TGTCAATGAATTTATCATCC+TGG | - | chr7_2:79863738-79863757 | None:intergenic | 30.0% | |
| ! | TCACAACTTTGCATATCTTT+TGG | + | chr7_2:79863952-79863971 | Msa1080410:three_prime_UTR | 30.0% |
| TATAATTTGACGGTGTATTG+CGG | - | chr7_2:79863984-79864003 | None:intergenic | 30.0% | |
| TATGTATACGTGGATAGTAA+TGG | + | chr7_2:79864042-79864061 | Msa1080410:three_prime_UTR | 30.0% | |
| ! | GATAGTAATGGAAGAAAACA+AGG | + | chr7_2:79864054-79864073 | Msa1080410:three_prime_UTR | 30.0% |
| ! | TAGATTTTTGTGTGTACACA+TGG | - | chr7_2:79864122-79864141 | None:intergenic | 30.0% |
| TGTGTACACACAAAAATCTA+TGG | + | chr7_2:79864122-79864141 | Msa1080410:three_prime_UTR | 30.0% | |
| ! | TAGAAGTGAAGTACTTCAAA+CGG | - | chr7_2:79864185-79864204 | None:intergenic | 30.0% |
| TTCAATAAGTACTTTCCTGT+CGG | + | chr7_2:79864249-79864268 | Msa1080410:intron | 30.0% | |
| TAAACATGAGAGTTGTTCAA+AGG | - | chr7_2:79864454-79864473 | None:intergenic | 30.0% | |
| TTTGAACAACTCTCATGTTT+AGG | + | chr7_2:79864453-79864472 | Msa1080410:three_prime_UTR | 30.0% | |
| TTCACCAAATGAATCGAGTT+AGG | + | chr7_2:79859970-79859989 | Msa1080410:five_prime_UTR | 35.0% | |
| TAAGAAATTAACGCCGAATC+TGG | + | chr7_2:79860134-79860153 | Msa1080410:CDS | 35.0% | |
| AAGAGAATCTCATCGATGAA+TGG | - | chr7_2:79860210-79860229 | None:intergenic | 35.0% | |
| ATCATAGAAGGAAACATGTG+CGG | - | chr7_2:79860238-79860257 | None:intergenic | 35.0% | |
| TCAACATCGAAACTAATCAG+TGG | + | chr7_2:79860259-79860278 | Msa1080410:CDS | 35.0% | |
| !! | GATCTCTGTTTGTTGTTAAG+AGG | + | chr7_2:79860301-79860320 | Msa1080410:CDS | 35.0% |
| ! | GATTGCTGTGATTTTTCTTC+AGG | + | chr7_2:79860383-79860402 | Msa1080410:intron | 35.0% |
| ATCACAATAAACTGAAACCG+AGG | - | chr7_2:79860418-79860437 | None:intergenic | 35.0% | |
| AAATAACCGCTATAGTGTAG+CGG | + | chr7_2:79860816-79860835 | Msa1080410:intron | 35.0% | |
| TAAATTCCGCTACACTATAG+CGG | - | chr7_2:79860825-79860844 | None:intergenic | 35.0% | |
| TTGTTCTGCAATGCACTATT+TGG | + | chr7_2:79860854-79860873 | Msa1080410:intron | 35.0% | |
| ACACCAAATTGCAGAATAGA+TGG | - | chr7_2:79860980-79860999 | None:intergenic | 35.0% | |
| GTTCTAATTCAGTAAGGCTA+CGG | - | chr7_2:79861066-79861085 | None:intergenic | 35.0% | |
| TTGTGGATCATGGAAAATAG+AGG | - | chr7_2:79861092-79861111 | None:intergenic | 35.0% | |
| GTGTTGTAAATTGTGGATCA+TGG | - | chr7_2:79861102-79861121 | None:intergenic | 35.0% | |
| TGATCCACAATTTACAACAC+TGG | + | chr7_2:79861102-79861121 | Msa1080410:intron | 35.0% | |
| TACACCAGTGTTGTAAATTG+TGG | - | chr7_2:79861109-79861128 | None:intergenic | 35.0% | |
| GTAATCAAGTAGGGAATAGA+TGG | - | chr7_2:79861146-79861165 | None:intergenic | 35.0% | |
| ! | TAATCTGGTGGAGAATCTTT+TGG | + | chr7_2:79861193-79861212 | Msa1080410:CDS | 35.0% |
| GCATTCCGATATAACAAGTA+TGG | - | chr7_2:79861242-79861261 | None:intergenic | 35.0% | |
| AATGCGTCACAAGAAGTTAA+TGG | + | chr7_2:79861257-79861276 | Msa1080410:CDS | 35.0% | |
| ACAACACGCATAAACAAACA+TGG | - | chr7_2:79861380-79861399 | None:intergenic | 35.0% | |
| TTGTTAAATAGCCGCTATAG+CGG | + | chr7_2:79861396-79861415 | Msa1080410:intron | 35.0% | |
| ! | TTTTGCCGAATCAAATTTGC+AGG | + | chr7_2:79861637-79861656 | Msa1080410:intron | 35.0% |
| GATTCTTAATGCATACCCAA+AGG | + | chr7_2:79861659-79861678 | Msa1080410:intron | 35.0% | |
| TTTGAAGACATCGTTGCATT+TGG | - | chr7_2:79861690-79861709 | None:intergenic | 35.0% | |
| CAACGATGTCTTCAAACAAA+AGG | + | chr7_2:79861694-79861713 | Msa1080410:intron | 35.0% | |
| ATGTCTTCAAACAAAAGGTG+AGG | + | chr7_2:79861699-79861718 | Msa1080410:intron | 35.0% | |
| TGTCTTCAAACAAAAGGTGA+GGG | + | chr7_2:79861700-79861719 | Msa1080410:intron | 35.0% | |
| !! | AAGTTTGGTTCCACTTTTAG+AGG | + | chr7_2:79861752-79861771 | Msa1080410:intron | 35.0% |
| TCTAACATGAAGCTAGAATC+TGG | + | chr7_2:79861846-79861865 | Msa1080410:intron | 35.0% | |
| !!! | GATTTTGGCTAAAAGTGTGT+TGG | - | chr7_2:79861962-79861981 | None:intergenic | 35.0% |
| GCTTGGAGAGATAATTAAGT+GGG | - | chr7_2:79862196-79862215 | None:intergenic | 35.0% | |
| AGCTTGGAGAGATAATTAAG+TGG | - | chr7_2:79862197-79862216 | None:intergenic | 35.0% | |
| CTACAGAGGATAAAAACATC+AGG | - | chr7_2:79862252-79862271 | None:intergenic | 35.0% | |
| TAAGTATTCAGCAAAAAGGC+AGG | - | chr7_2:79862421-79862440 | None:intergenic | 35.0% | |
| TTGCAGACATGTAAGATTAC+TGG | + | chr7_2:79862521-79862540 | Msa1080410:intron | 35.0% | |
| !! | GTAGAAGGTGTTTGAATAGA+AGG | - | chr7_2:79862638-79862657 | None:intergenic | 35.0% |
| TTGGATGCAAGAAAAGTAGA+AGG | - | chr7_2:79862710-79862729 | None:intergenic | 35.0% | |
| !!! | GTTCATTTATTTTGTGTGGG+AGG | + | chr7_2:79863163-79863182 | Msa1080410:intron | 35.0% |
| !!! | TCATTTATTTTGTGTGGGAG+GGG | + | chr7_2:79863165-79863184 | Msa1080410:intron | 35.0% |
| ! | AAGAAGTGTACTTTCTGTCT+TGG | - | chr7_2:79863290-79863309 | None:intergenic | 35.0% |
| ! | AAGACAGAAAGTACACTTCT+TGG | + | chr7_2:79863289-79863308 | Msa1080410:intron | 35.0% |
| TCTGTGATTGGGAAATAAGA+TGG | + | chr7_2:79863377-79863396 | Msa1080410:intron | 35.0% | |
| !! | TCTGTGGTATGCAGTTTTAT+AGG | + | chr7_2:79863473-79863492 | Msa1080410:intron | 35.0% |
| ! | ATGCTTCCAAGTTTTTGTTC+TGG | + | chr7_2:79863612-79863631 | Msa1080410:intron | 35.0% |
| TCCACACAAATGGTAAAACA+GGG | - | chr7_2:79863592-79863611 | None:intergenic | 35.0% | |
| TTCCACACAAATGGTAAAAC+AGG | - | chr7_2:79863593-79863612 | None:intergenic | 35.0% | |
| ! | ATGCTTCCAAGTTTTTGTTC+TGG | + | chr7_2:79863612-79863631 | Msa1080410:intron | 35.0% |
| ! | TAACGATATTTTCTTGTGCC+AGG | + | chr7_2:79863717-79863736 | Msa1080410:intron | 35.0% |
| CATGAGTAATCGAACATCAA+AGG | + | chr7_2:79863791-79863810 | Msa1080410:exon | 35.0% | |
| AGTAATCGAACATCAAAGGT+TGG | + | chr7_2:79863795-79863814 | Msa1080410:exon | 35.0% | |
| GTAATCGAACATCAAAGGTT+GGG | + | chr7_2:79863796-79863815 | Msa1080410:three_prime_UTR | 35.0% | |
| AAGTTACACAAAACATGCCA+TGG | - | chr7_2:79863884-79863903 | None:intergenic | 35.0% | |
| AAGATATGCAAAGTTGTGAC+AGG | - | chr7_2:79863951-79863970 | None:intergenic | 35.0% | |
| AGAAAACCTATAAAACCTCC+AGG | - | chr7_2:79864317-79864336 | None:intergenic | 35.0% | |
| !! | TCAAAGGTGTTGTTCAAAAG+TGG | - | chr7_2:79864438-79864457 | None:intergenic | 35.0% |
| AGAAAGTTGTCAGAAGTAGT+TGG | + | chr7_2:79864532-79864551 | Msa1080410:three_prime_UTR | 35.0% | |
| TGCAACAAGTCTTAAGAACT+TGG | + | chr7_2:79864644-79864663 | Msa1080410:three_prime_UTR | 35.0% | |
| TTCACCAATGTTGTCAATCG+CGG | - | chr7_2:79860943-79860962 | None:intergenic | 40.0% | |
| CAGAATAGATGGCACAGATT+TGG | - | chr7_2:79860969-79860988 | None:intergenic | 40.0% | |
| GTGCCATCTATTCTGCAATT+TGG | + | chr7_2:79860974-79860993 | Msa1080410:intron | 40.0% | |
| GCAACTTCTTCACATTCTTC+TGG | - | chr7_2:79861299-79861318 | None:intergenic | 40.0% | |
| CTGCACAAATAGCTTGACTA+GGG | - | chr7_2:79861350-79861369 | None:intergenic | 40.0% | |
| ACTGCACAAATAGCTTGACT+AGG | - | chr7_2:79861351-79861370 | None:intergenic | 40.0% | |
| !!! | CTGCATTTTGATTACACGAC+AGG | - | chr7_2:79861590-79861609 | None:intergenic | 40.0% |
| CTGTCGTGTAATCAAAATGC+AGG | + | chr7_2:79861588-79861607 | Msa1080410:intron | 40.0% | |
| !! | TTGCATTTGGAAGTGCCTTT+GGG | - | chr7_2:79861677-79861696 | None:intergenic | 40.0% |
| !! | TTTGGTTCCACTTTTAGAGG+AGG | + | chr7_2:79861755-79861774 | Msa1080410:intron | 40.0% |
| ! | TTTGGCTAAAAGTGTGTTGG+AGG | - | chr7_2:79861959-79861978 | None:intergenic | 40.0% |
| TATCCTCTGTAGTGAGTTTG+AGG | + | chr7_2:79862260-79862279 | Msa1080410:intron | 40.0% | |
| CTCGATAGCGCTTTCATTTA+TGG | - | chr7_2:79862304-79862323 | None:intergenic | 40.0% | |
| CAGCAAAAAGGCAGGAAAAT+CGG | - | chr7_2:79862413-79862432 | None:intergenic | 40.0% | |
| TAGAAGTGACACTTGCAGAA+TGG | - | chr7_2:79862586-79862605 | None:intergenic | 40.0% | |
| ! | GGTGTTTGAATAGAAGGTAC+AGG | - | chr7_2:79862632-79862651 | None:intergenic | 40.0% |
| ATTGTTTCGAGAGAGGTAGA+AGG | - | chr7_2:79862653-79862672 | None:intergenic | 40.0% | |
| ! | ACTGTTGATTGTTTCGAGAG+AGG | - | chr7_2:79862660-79862679 | None:intergenic | 40.0% |
| TCTCTCGAAACAATCAACAG+TGG | + | chr7_2:79862659-79862678 | Msa1080410:CDS | 40.0% | |
| AAATGGGGGTAAGAGAAGAA+GGG | - | chr7_2:79862859-79862878 | None:intergenic | 40.0% | |
| TTTGGCATAGAGCTGGAAAT+GGG | - | chr7_2:79862875-79862894 | None:intergenic | 40.0% | |
| ATTTGGCATAGAGCTGGAAA+TGG | - | chr7_2:79862876-79862895 | None:intergenic | 40.0% | |
| TTTCCAGCTCTATGCCAAAT+AGG | + | chr7_2:79862876-79862895 | Msa1080410:intron | 40.0% | |
| ACTTTATCCCTGCTGATAAC+CGG | - | chr7_2:79862902-79862921 | None:intergenic | 40.0% | |
| !!! | CATTTATTTTGTGTGGGAGG+GGG | + | chr7_2:79863166-79863185 | Msa1080410:intron | 40.0% |
| TGATTGGGAAATAAGATGGC+AGG | + | chr7_2:79863381-79863400 | Msa1080410:intron | 40.0% | |
| ATAAGATGGCAGGACCATAA+AGG | + | chr7_2:79863391-79863410 | Msa1080410:intron | 40.0% | |
| CAAGCGTGAAATTAGATCTG+TGG | + | chr7_2:79863457-79863476 | Msa1080410:intron | 40.0% | |
| AATAGAACGTCAGTATAGGG+TGG | + | chr7_2:79863545-79863564 | Msa1080410:intron | 40.0% | |
| !! | TTGGAAGCATTCCACACAAA+TGG | - | chr7_2:79863602-79863621 | None:intergenic | 40.0% |
| ! | TCCCTGTTTTACCATTTGTG+TGG | + | chr7_2:79863649-79863668 | Msa1080410:intron | 40.0% |
| !! | TTGGAAGCATTCCACACAAA+TGG | - | chr7_2:79863602-79863621 | None:intergenic | 40.0% |
| !! | CACAAACCTGGAGGTTTTAT+AGG | + | chr7_2:79864308-79864327 | Msa1080410:intron | 40.0% |
| AGTCATAAGCATCCATGCAA+AGG | + | chr7_2:79864364-79864383 | Msa1080410:three_prime_UTR | 40.0% | |
| ! | GATATGTCGTGCAAGAGTTT+TGG | + | chr7_2:79864386-79864405 | Msa1080410:three_prime_UTR | 40.0% |
| ! | ACTTGACTCGAGAGAAGAAG+AGG | - | chr7_2:79860068-79860087 | None:intergenic | 45.0% |
| ! | GTGCTGTGTTGATCCAGATT+CGG | - | chr7_2:79860150-79860169 | None:intergenic | 45.0% |
| ATAGAAGGAAACATGTGCGG+CGG | - | chr7_2:79860235-79860254 | None:intergenic | 45.0% | |
| TGGAGTCGCAAAGATGTTGA+AGG | + | chr7_2:79860279-79860298 | Msa1080410:CDS | 45.0% | |
| TCTTCAGGAATGCTCAACCT+CGG | + | chr7_2:79860398-79860417 | Msa1080410:intron | 45.0% | |
| GTGATGAATCGGCGAAATAC+AGG | + | chr7_2:79860433-79860452 | Msa1080410:CDS | 45.0% | |
| CGGATCATTCCACCAAGATA+CGG | - | chr7_2:79860923-79860942 | None:intergenic | 45.0% | |
| TGATCCGCGATTGACAACAT+TGG | + | chr7_2:79860936-79860955 | Msa1080410:intron | 45.0% | |
| TCGCGCTAAATAGTGCATTG+AGG | - | chr7_2:79861007-79861026 | None:intergenic | 45.0% | |
| CAAGTAGGGAATAGATGGCA+CGG | - | chr7_2:79861141-79861160 | None:intergenic | 45.0% | |
| GTTATACCGCTATAGCGTAG+CGG | + | chr7_2:79861420-79861439 | Msa1080410:intron | 45.0% | |
| CAAATTCCGCTACGCTATAG+CGG | - | chr7_2:79861429-79861448 | None:intergenic | 45.0% | |
| TTGTCGGGTAGAGATTACAG+TGG | + | chr7_2:79861496-79861515 | Msa1080410:intron | 45.0% | |
| !! | GTTGCATTTGGAAGTGCCTT+TGG | - | chr7_2:79861678-79861697 | None:intergenic | 45.0% |
| GTTCCTCAAACTCACTACAG+AGG | - | chr7_2:79862266-79862285 | None:intergenic | 45.0% | |
| GTGACACTTGCAGAATGGTA+GGG | - | chr7_2:79862581-79862600 | None:intergenic | 45.0% | |
| AGTGACACTTGCAGAATGGT+AGG | - | chr7_2:79862582-79862601 | None:intergenic | 45.0% | |
| !! | AGTGTCACTTCTACTGTTCC+TGG | + | chr7_2:79862593-79862612 | Msa1080410:CDS | 45.0% |
| AACAATCAACAGTGGCACTC+AGG | + | chr7_2:79862667-79862686 | Msa1080410:CDS | 45.0% | |
| GTATGATGAACAGCTGCACT+AGG | - | chr7_2:79862776-79862795 | None:intergenic | 45.0% | |
| ! | GTATTGGCGTGGTAGATTCT+GGG | - | chr7_2:79862798-79862817 | None:intergenic | 45.0% |
| CAGAATCTACCACGCCAATA+CGG | + | chr7_2:79862797-79862816 | Msa1080410:intron | 45.0% | |
| AATGGGGGTAAGAGAAGAAG+GGG | - | chr7_2:79862858-79862877 | None:intergenic | 45.0% | |
| GAAATGGGGGTAAGAGAAGA+AGG | - | chr7_2:79862860-79862879 | None:intergenic | 45.0% | |
| TTGGCATAGAGCTGGAAATG+GGG | - | chr7_2:79862874-79862893 | None:intergenic | 45.0% | |
| AAATAGGCCGGTTATCAGCA+GGG | + | chr7_2:79862892-79862911 | Msa1080410:intron | 45.0% | |
| CCAGTGATACAAGTGCATCA+CGG | - | chr7_2:79862925-79862944 | None:intergenic | 45.0% | |
| !! | TGCACTTGTATCACTGGTTC+AGG | + | chr7_2:79862928-79862947 | Msa1080410:intron | 45.0% |
| !! | TCACTGGTTCAGGTACTTCA+TGG | + | chr7_2:79862938-79862957 | Msa1080410:intron | 45.0% |
| !! | TCAGTTACGTTTTTGAGGGG+TGG | + | chr7_2:79863199-79863218 | Msa1080410:intron | 45.0% |
| !! | CAGTTACGTTTTTGAGGGGT+GGG | + | chr7_2:79863200-79863219 | Msa1080410:intron | 45.0% |
| !! | AGTTACGTTTTTGAGGGGTG+GGG | + | chr7_2:79863201-79863220 | Msa1080410:intron | 45.0% |
| TTGACGGTGTATTGCGGAAT+CGG | - | chr7_2:79863978-79863997 | None:intergenic | 45.0% | |
| CACAAGTACCACGAAGTGTA+AGG | - | chr7_2:79864281-79864300 | None:intergenic | 45.0% | |
| CTTCGTGGTACTTGTGCTAT+TGG | + | chr7_2:79864285-79864304 | Msa1080410:intron | 45.0% | |
| ! | TTGTGCTATTGGCACAAACC+TGG | + | chr7_2:79864296-79864315 | Msa1080410:intron | 45.0% |
| TGCACGACATATCCTTTGCA+TGG | - | chr7_2:79864379-79864398 | None:intergenic | 45.0% | |
| !!! | AATTTATTTTTTTACTTAAA+TGG | + | chr7_2:79864621-79864640 | Msa1080410:three_prime_UTR | 5.0% |
| CGATGAATGGATCCATGCGT+TGG | - | chr7_2:79860197-79860216 | None:intergenic | 50.0% | |
| GTCACTTCTACTGTTCCTGG+TGG | + | chr7_2:79862596-79862615 | Msa1080410:CDS | 50.0% | |
| ACAGGCGACAAAAAACCACC+AGG | - | chr7_2:79862614-79862633 | None:intergenic | 50.0% | |
| GGCATGGGTGAAGAAATAGG+TGG | - | chr7_2:79862752-79862771 | None:intergenic | 50.0% | |
| GGTGGCATGGGTGAAGAAAT+AGG | - | chr7_2:79862755-79862774 | None:intergenic | 50.0% | |
| TGATGAACAGCTGCACTAGG+TGG | - | chr7_2:79862773-79862792 | None:intergenic | 50.0% | |
| ! | CGTATTGGCGTGGTAGATTC+TGG | - | chr7_2:79862799-79862818 | None:intergenic | 50.0% |
| GTAAGAGAAGAAGGGGGGTT+AGG | - | chr7_2:79862851-79862870 | None:intergenic | 50.0% | |
| ATGGGGGTAAGAGAAGAAGG+GGG | - | chr7_2:79862857-79862876 | None:intergenic | 50.0% | |
| TGGCATAGAGCTGGAAATGG+GGG | - | chr7_2:79862873-79862892 | None:intergenic | 50.0% | |
| CAGCTCTATGCCAAATAGGC+CGG | + | chr7_2:79862880-79862899 | Msa1080410:intron | 50.0% | |
| CTGCTGATAACCGGCCTATT+TGG | - | chr7_2:79862893-79862912 | None:intergenic | 50.0% | |
| CAAATAGGCCGGTTATCAGC+AGG | + | chr7_2:79862891-79862910 | Msa1080410:intron | 50.0% | |
| CCGTGATGCACTTGTATCAC+TGG | + | chr7_2:79862922-79862941 | Msa1080410:intron | 50.0% | |
| !! | GTTACGTTTTTGAGGGGTGG+GGG | + | chr7_2:79863202-79863221 | Msa1080410:intron | 50.0% |
| GATGGCAGGACCATAAAGGA+AGG | + | chr7_2:79863395-79863414 | Msa1080410:intron | 50.0% | |
| CATGGTCGAGTCAGATGTGT+TGG | - | chr7_2:79863866-79863885 | None:intergenic | 50.0% | |
| ! | CAACACATCTGACTCGACCA+TGG | + | chr7_2:79863864-79863883 | Msa1080410:three_prime_UTR | 50.0% |
| AGTGTAAGGAGAACACCGAC+AGG | - | chr7_2:79864267-79864286 | None:intergenic | 50.0% | |
| GGTGTTCTCCTTACACTTCG+TGG | + | chr7_2:79864270-79864289 | Msa1080410:intron | 50.0% | |
| TGCTATTGGCACAAACCTGG+AGG | + | chr7_2:79864299-79864318 | Msa1080410:intron | 50.0% | |
| TCTCACTGTGCTCCAACGCA+TGG | + | chr7_2:79860182-79860201 | Msa1080410:CDS | 55.0% | |
| !! | GCGAAAGCACCGTATCTTGG+TGG | + | chr7_2:79860911-79860930 | Msa1080410:intron | 55.0% |
| GCGGTATAACGCCGCTATAG+CGG | - | chr7_2:79861410-79861429 | None:intergenic | 55.0% | |
| CACTTGCAGAATGGTAGGGC+TGG | - | chr7_2:79862577-79862596 | None:intergenic | 55.0% | |
| ACAGCTGCACTAGGTGGCAT+GGG | - | chr7_2:79862767-79862786 | None:intergenic | 55.0% | |
| AACAGCTGCACTAGGTGGCA+TGG | - | chr7_2:79862768-79862787 | None:intergenic | 55.0% | |
| AAGAAGGGGGGTTAGGTGGT+GGG | - | chr7_2:79862844-79862863 | None:intergenic | 55.0% | |
| AGAGAAGAAGGGGGGTTAGG+TGG | - | chr7_2:79862848-79862867 | None:intergenic | 55.0% | |
| TGGGGGTAAGAGAAGAAGGG+GGG | - | chr7_2:79862856-79862875 | None:intergenic | 55.0% | |
| CGGCCTATTTGGCATAGAGC+TGG | - | chr7_2:79862882-79862901 | None:intergenic | 55.0% | |
| !! | GGCGCGAAAGCACCGTATCT+TGG | + | chr7_2:79860908-79860927 | Msa1080410:intron | 60.0% |
| !! | GGTTAGGTGGTGGGAAGGGT+TGG | - | chr7_2:79862835-79862854 | None:intergenic | 60.0% |
| GAAGAAGGGGGGTTAGGTGG+TGG | - | chr7_2:79862845-79862864 | None:intergenic | 60.0% | |
| !! | ACGTTTTTGAGGGGTGGGGG+AGG | + | chr7_2:79863205-79863224 | Msa1080410:intron | 60.0% |
| !! | AGCGGAGTGCCGTATTGGCG+TGG | - | chr7_2:79862809-79862828 | None:intergenic | 65.0% |
| !! | GGAGCAGCGGAGTGCCGTAT+TGG | - | chr7_2:79862814-79862833 | None:intergenic | 65.0% |
| GGTGGGAAGGGTTGGAGCAG+CGG | - | chr7_2:79862827-79862846 | None:intergenic | 65.0% | |
| !! | GGGGGGTTAGGTGGTGGGAA+GGG | - | chr7_2:79862839-79862858 | None:intergenic | 65.0% |
| !! | AGGGGGGTTAGGTGGTGGGA+AGG | - | chr7_2:79862840-79862859 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79859929 | 79864667 | 79859929 | ID=Msa1080410;Name=Msa1080410 |
| chr7_2 | mRNA | 79859929 | 79864667 | 79859929 | ID=Msa1080410-mRNA-1;Parent=Msa1080410;Name=Msa1080410-mRNA-1;_AED=0.11;_eAED=0.11;_QI=194|0.66|0.85|1|0.83|0.71|7|765|242 |
| chr7_2 | exon | 79859929 | 79860322 | 79859929 | ID=Msa1080410-mRNA-1:exon:20103;Parent=Msa1080410-mRNA-1 |
| chr7_2 | exon | 79860405 | 79860454 | 79860405 | ID=Msa1080410-mRNA-1:exon:20104;Parent=Msa1080410-mRNA-1 |
| chr7_2 | exon | 79861192 | 79861333 | 79861192 | ID=Msa1080410-mRNA-1:exon:20105;Parent=Msa1080410-mRNA-1 |
| chr7_2 | exon | 79862272 | 79862389 | 79862272 | ID=Msa1080410-mRNA-1:exon:20106;Parent=Msa1080410-mRNA-1 |
| chr7_2 | exon | 79862527 | 79862688 | 79862527 | ID=Msa1080410-mRNA-1:exon:20107;Parent=Msa1080410-mRNA-1 |
| chr7_2 | exon | 79863739 | 79864222 | 79863739 | ID=Msa1080410-mRNA-1:exon:20108;Parent=Msa1080410-mRNA-1 |
| chr7_2 | exon | 79864330 | 79864667 | 79864330 | ID=Msa1080410-mRNA-1:exon:20109;Parent=Msa1080410-mRNA-1 |
| chr7_2 | five_prime_UTR | 79859929 | 79860122 | 79859929 | ID=Msa1080410-mRNA-1:five_prime_utr;Parent=Msa1080410-mRNA-1 |
| chr7_2 | CDS | 79860123 | 79860322 | 79860123 | ID=Msa1080410-mRNA-1:cds;Parent=Msa1080410-mRNA-1 |
| chr7_2 | CDS | 79860405 | 79860454 | 79860405 | ID=Msa1080410-mRNA-1:cds;Parent=Msa1080410-mRNA-1 |
| chr7_2 | CDS | 79861192 | 79861333 | 79861192 | ID=Msa1080410-mRNA-1:cds;Parent=Msa1080410-mRNA-1 |
| chr7_2 | CDS | 79862272 | 79862389 | 79862272 | ID=Msa1080410-mRNA-1:cds;Parent=Msa1080410-mRNA-1 |
| chr7_2 | CDS | 79862527 | 79862688 | 79862527 | ID=Msa1080410-mRNA-1:cds;Parent=Msa1080410-mRNA-1 |
| chr7_2 | CDS | 79863739 | 79863795 | 79863739 | ID=Msa1080410-mRNA-1:cds;Parent=Msa1080410-mRNA-1 |
| chr7_2 | three_prime_UTR | 79863796 | 79864222 | 79863796 | ID=Msa1080410-mRNA-1:three_prime_utr;Parent=Msa1080410-mRNA-1 |
| chr7_2 | three_prime_UTR | 79864330 | 79864667 | 79864330 | ID=Msa1080410-mRNA-1:three_prime_utr;Parent=Msa1080410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
