AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0795030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795030 MtrunA17_Chr5g0396741 96.875 320 9 1 1 319 1 320 0.0 635
Msa0795030 MtrunA17_Chr3g0115631 52.096 167 58 4 115 261 148 312 5.79e-45 156
Msa0795030 MtrunA17_Chr5g0425561 65.000 100 31 2 109 207 165 261 4.06e-40 144
Msa0795030 MtrunA17_Chr8g0382491 65.591 93 24 2 115 207 111 195 2.45e-37 134
Msa0795030 MtrunA17_Chr1g0196781 40.865 208 80 6 113 319 148 313 1.95e-36 133
Msa0795030 MtrunA17_Chr2g0324131 65.060 83 25 2 94 175 197 276 5.27e-30 118
Msa0795030 MtrunA17_Chr1g0150661 39.103 156 80 4 84 233 3 149 2.17e-25 101
Msa0795030 MtrunA17_Chr1g0150671 37.952 166 91 4 85 248 12 167 5.12e-25 102
Msa0795030 MtrunA17_Chr1g0150631 39.231 130 74 2 110 237 31 157 5.41e-24 97.8
Msa0795030 MtrunA17_Chr7g0221501 50.000 90 39 1 90 173 18 107 6.60e-24 96.3
Msa0795030 MtrunA17_Chr8g0335311 55.172 87 37 2 92 177 72 157 1.08e-23 96.3
Msa0795030 MtrunA17_Chr8g0335321 46.429 112 46 5 84 181 53 164 5.87e-23 94.7
Msa0795030 MtrunA17_Chr2g0295421 63.492 63 23 0 112 174 91 153 6.36e-23 95.5
Msa0795030 MtrunA17_Chr1g0150691 61.538 65 25 0 110 174 15 79 6.60e-23 94.7
Msa0795030 MtrunA17_Chr8g0335331 67.164 67 21 1 112 177 120 186 7.68e-23 94.0
Msa0795030 MtrunA17_Chr7g0221471 67.213 61 20 0 113 173 47 107 9.40e-23 93.2
Msa0795030 MtrunA17_Chr4g0055761 70.312 64 18 1 111 173 139 202 1.27e-22 95.1
Msa0795030 MtrunA17_Chr7g0250711 51.087 92 40 2 85 175 32 119 1.56e-22 93.2
Msa0795030 MtrunA17_Chr1g0195151 63.077 65 24 0 113 177 73 137 3.24e-22 94.7
Msa0795030 MtrunA17_Chr4g0044901 48.936 94 35 1 117 210 96 176 4.10e-22 92.8
Msa0795030 MtrunA17_Chr8g0375031 67.797 59 19 0 114 172 122 180 6.97e-22 92.0
Msa0795030 MtrunA17_Chr4g0044911 64.062 64 23 0 117 180 96 159 1.43e-21 91.3
Msa0795030 MtrunA17_Chr2g0301181 36.552 145 68 3 116 260 18 138 1.50e-21 91.3
Msa0795030 MtrunA17_Chr3g0134161 64.516 62 22 0 114 175 42 103 1.66e-21 89.7
Msa0795030 MtrunA17_Chr2g0283171 45.217 115 41 4 64 173 23 120 1.85e-21 89.0
Msa0795030 MtrunA17_Chr2g0301191 57.971 69 27 1 116 184 18 84 2.38e-21 90.5
Msa0795030 MtrunA17_Chr4g0044871 68.421 57 18 0 117 173 96 152 2.54e-21 90.5
Msa0795030 MtrunA17_Chr4g0044881 48.454 97 28 2 113 187 110 206 4.32e-21 90.1
Msa0795030 MtrunA17_Chr4g0003421 61.538 65 25 0 109 173 32 96 4.33e-21 90.5
Msa0795030 MtrunA17_Chr2g0301171 50.617 81 38 1 116 196 18 96 5.42e-21 89.0
Msa0795030 MtrunA17_Chr8g0383591 66.667 60 20 0 114 173 142 201 6.01e-21 91.3
Msa0795030 MtrunA17_Chr4g0026881 36.066 183 88 7 74 239 39 209 7.24e-21 89.7
Msa0795030 MtrunA17_Chr3g0126321 53.333 90 38 2 115 202 111 198 7.65e-21 91.7
Msa0795030 MtrunA17_Chr4g0046161 62.500 64 23 1 112 174 52 115 7.90e-21 86.3
Msa0795030 MtrunA17_Chr4g0063751 64.407 59 21 0 115 173 5 63 1.08e-20 88.6
Msa0795030 MtrunA17_Chr7g0250731 49.462 93 44 2 84 175 30 120 1.11e-20 88.2
Msa0795030 MtrunA17_Chr7g0232261 60.606 66 26 0 110 175 54 119 1.42e-20 88.6
Msa0795030 MtrunA17_Chr7g0250721 49.495 99 49 1 78 175 22 120 2.05e-20 87.8
Msa0795030 MtrunA17_Chr5g0401871 46.465 99 48 2 114 207 22 120 2.38e-20 86.7
Msa0795030 MtrunA17_Chr2g0333011 50.000 92 45 1 115 205 5 96 2.51e-20 86.7
Msa0795030 MtrunA17_Chr4g0002631 63.333 60 22 0 114 173 5 64 2.71e-20 87.0
Msa0795030 MtrunA17_Chr7g0257911 63.333 60 22 0 117 176 31 90 4.79e-20 88.2
Msa0795030 MtrunA17_Chr2g0334031 60.656 61 24 0 113 173 113 173 5.15e-20 89.4
Msa0795030 MtrunA17_Chr5g0399441 60.317 63 25 0 113 175 24 86 5.83e-20 85.9
Msa0795030 MtrunA17_Chr1g0153151 63.934 61 22 0 115 175 42 102 6.06e-20 85.5
Msa0795030 MtrunA17_Chr3g0137174 63.333 60 22 0 114 173 5 64 8.74e-20 85.5
Msa0795030 MtrunA17_Chr2g0323171 64.407 59 21 0 117 175 65 123 9.27e-20 85.5
Msa0795030 MtrunA17_Chr4g0023411 63.333 60 22 0 117 176 65 124 1.02e-19 85.5
Msa0795030 MtrunA17_Chr5g0396911 66.129 62 19 1 111 172 108 167 1.23e-19 87.4
Msa0795030 MtrunA17_Chr8g0344961 60.656 61 24 0 113 173 120 180 1.25e-19 88.6
Msa0795030 MtrunA17_Chr6g0486701 65.000 60 21 0 116 175 43 102 1.45e-19 85.5
Msa0795030 MtrunA17_Chr7g0275841 54.839 62 28 0 113 174 24 85 1.67e-19 84.3
Msa0795030 MtrunA17_Chr7g0265851 51.282 78 38 0 97 174 4 81 1.72e-19 85.1
Msa0795030 MtrunA17_Chr7g0225131 48.864 88 40 2 98 183 8 92 1.88e-19 81.6
Msa0795030 MtrunA17_Chr5g0437671 63.934 61 22 0 117 177 85 145 2.71e-19 87.8
Msa0795030 MtrunA17_Chr3g0140161 55.385 65 29 0 113 177 39 103 3.04e-19 84.0
Msa0795030 MtrunA17_Chr3g0136551 44.762 105 44 3 114 218 62 152 3.25e-19 85.9
Msa0795030 MtrunA17_Chr2g0331231 52.703 74 31 1 116 185 40 113 1.05e-18 82.8
Msa0795030 MtrunA17_Chr4g0055781 65.079 63 21 1 112 173 97 159 1.10e-18 84.0
Msa0795030 MtrunA17_Chr4g0055801 65.079 63 21 1 112 173 149 211 1.13e-18 84.7
Msa0795030 MtrunA17_Chr8g0334801 54.286 70 32 0 106 175 41 110 1.59e-18 82.4
Msa0795030 MtrunA17_Chr8g0387801 63.793 58 21 0 115 172 105 162 1.70e-18 84.3
Msa0795030 MtrunA17_Chr2g0316931 59.016 61 25 0 113 173 27 87 1.75e-18 82.4
Msa0795030 MtrunA17_Chr3g0099871 50.000 84 39 2 97 178 5 87 1.81e-18 82.8
Msa0795030 MtrunA17_Chr8g0340311 55.556 63 28 0 113 175 43 105 1.93e-18 82.0
Msa0795030 MtrunA17_Chr1g0158971 42.963 135 46 5 114 247 112 216 2.24e-18 84.3
Msa0795030 MtrunA17_Chr1g0184081 66.102 59 19 1 117 174 21 79 2.42e-18 80.5
Msa0795030 MtrunA17_Chr2g0282651 42.202 109 45 2 79 173 22 126 2.48e-18 82.8
Msa0795030 MtrunA17_Chr5g0437371 67.797 59 19 0 114 172 63 121 3.06e-18 84.0
Msa0795030 MtrunA17_Chr5g0438831 54.795 73 30 1 101 173 33 102 3.93e-18 82.8
Msa0795030 MtrunA17_Chr8g0390091 47.619 84 34 1 102 175 12 95 4.00e-18 82.0
Msa0795030 MtrunA17_Chr4g0017851 56.897 58 25 0 116 173 117 174 4.13e-18 83.2
Msa0795030 MtrunA17_Chr3g0136541 45.000 100 41 3 119 218 42 127 7.72e-18 81.3
Msa0795030 MtrunA17_Chr1g0170531 61.667 60 22 1 115 173 87 146 8.37e-18 80.9
Msa0795030 MtrunA17_Chr1g0189941 62.500 56 21 0 117 172 24 79 9.18e-18 79.3
Msa0795030 MtrunA17_Chr2g0282621 49.451 91 40 2 101 191 1 85 1.09e-17 79.3
Msa0795030 MtrunA17_Chr5g0438801 59.677 62 25 0 112 173 46 107 1.34e-17 81.3
Msa0795030 MtrunA17_Chr4g0055951 57.627 59 25 0 117 175 74 132 1.84e-17 80.5
Msa0795030 MtrunA17_Chr1g0186731 62.712 59 21 1 117 174 21 79 1.89e-17 77.8
Msa0795030 MtrunA17_Chr2g0283181 42.609 115 58 3 114 220 146 260 1.92e-17 81.3
Msa0795030 MtrunA17_Chr8g0346741 53.226 62 29 0 113 174 35 96 2.81e-17 78.2
Msa0795030 MtrunA17_Chr1g0186671 65.000 60 18 2 117 174 19 77 3.64e-17 77.0
Msa0795030 MtrunA17_Chr8g0367911 60.714 56 22 0 117 172 44 99 8.04e-17 79.3
Msa0795030 MtrunA17_Chr5g0432821 61.404 57 22 0 117 173 124 180 8.69e-17 79.0
Msa0795030 MtrunA17_Chr4g0026931 40.000 145 74 6 98 238 111 246 1.09e-16 78.6
Msa0795030 MtrunA17_Chr5g0412641 62.500 56 21 0 117 172 46 101 2.34e-16 79.0
Msa0795030 MtrunA17_Chr7g0261101 61.905 63 23 1 113 174 16 78 2.72e-16 74.7
Msa0795030 MtrunA17_Chr4g0062551 52.308 65 31 0 110 174 46 110 3.65e-16 74.3
Msa0795030 MtrunA17_Chr5g0396191 43.243 111 54 1 117 227 11 112 4.10e-16 75.5
Msa0795030 MtrunA17_Chr6g0473971 55.000 60 27 0 113 172 50 109 4.42e-16 76.6
Msa0795030 MtrunA17_Chr6g0473941 56.667 60 26 0 113 172 29 88 5.14e-16 75.5
Msa0795030 MtrunA17_Chr7g0261151 58.209 67 27 1 113 178 16 82 5.36e-16 73.6
Msa0795030 MtrunA17_Chr6g0473981 54.839 62 28 0 113 174 50 111 5.36e-16 76.3
Msa0795030 MtrunA17_Chr5g0396301 53.968 63 27 1 115 175 16 78 5.37e-16 74.3
Msa0795030 MtrunA17_Chr4g0062161 52.308 65 31 0 110 174 46 110 5.54e-16 75.5
Msa0795030 MtrunA17_Chr6g0473961 56.667 60 26 0 113 172 50 109 5.60e-16 75.5
Msa0795030 MtrunA17_Chr6g0473931 43.333 90 43 1 93 174 1 90 5.86e-16 75.1
Msa0795030 MtrunA17_Chr2g0286161 55.357 56 25 0 117 172 50 105 9.94e-16 76.3
Msa0795030 MtrunA17_Chr1g0196871 58.621 58 23 1 117 173 16 73 1.16e-15 71.6
Msa0795030 MtrunA17_Chr7g0252381 60.714 56 22 0 117 172 42 97 1.21e-15 75.9
Msa0795030 MtrunA17_Chr6g0473881 55.000 60 27 0 113 172 106 165 1.84e-15 75.5
Msa0795030 MtrunA17_Chr1g0146191 58.462 65 27 0 113 177 43 107 2.03e-15 74.7
Msa0795030 MtrunA17_Chr1g0149331 45.370 108 41 2 113 206 3 106 2.33e-15 73.6
Msa0795030 MtrunA17_Chr8g0350701 58.621 58 24 0 115 172 25 82 2.38e-15 75.5
Msa0795030 MtrunA17_Chr4g0066931 55.357 56 25 0 117 172 53 108 2.53e-15 75.5
Msa0795030 MtrunA17_Chr6g0474001 55.000 60 27 0 113 172 50 109 2.91e-15 74.7
Msa0795030 MtrunA17_Chr3g0131601 43.548 124 61 4 112 228 71 192 4.04e-15 73.9
Msa0795030 MtrunA17_Chr6g0473781 53.226 62 29 0 113 174 53 114 5.45e-15 73.2
Msa0795030 MtrunA17_Chr1g0184061 52.308 65 30 1 109 172 69 133 5.56e-15 72.8
Msa0795030 MtrunA17_Chr7g0243431 58.730 63 19 1 117 172 78 140 5.60e-15 75.5
Msa0795030 MtrunA17_Chr1g0203861 55.000 60 27 0 113 172 40 99 5.74e-15 72.4
Msa0795030 MtrunA17_Chr3g0137831 47.059 102 43 2 115 205 6 107 6.62e-15 72.4
Msa0795030 MtrunA17_Chr6g0473771 41.053 95 43 2 91 172 4 98 7.39e-15 70.1
Msa0795030 MtrunA17_Chr1g0183981 54.688 64 28 1 110 172 68 131 8.57e-15 72.4
Msa0795030 MtrunA17_Chr2g0297331 61.017 59 22 1 117 174 14 72 1.07e-14 70.1
Msa0795030 MtrunA17_Chr7g0253424 58.929 56 23 0 117 172 39 94 1.13e-14 72.8
Msa0795030 MtrunA17_Chr6g0453661 57.627 59 25 0 114 172 35 93 1.20e-14 73.9
Msa0795030 MtrunA17_Chr3g0129421 64.706 68 21 1 114 178 167 234 1.35e-14 73.6
Msa0795030 MtrunA17_Chr1g0186681 58.333 60 23 1 117 174 19 78 1.51e-14 69.3
Msa0795030 MtrunA17_Chr6g0473741 51.613 62 30 0 113 174 62 123 1.78e-14 71.6
Msa0795030 MtrunA17_Chr6g0486711 58.730 63 26 0 113 175 45 107 1.85e-14 71.6
Msa0795030 MtrunA17_Chr1g0155751 60.938 64 25 0 117 180 39 102 2.07e-14 72.0
Msa0795030 MtrunA17_Chr1g0184031 55.738 61 26 1 113 172 80 140 2.08e-14 71.2
Msa0795030 MtrunA17_Chr7g0217991 57.627 59 25 0 114 172 39 97 2.14e-14 73.6
Msa0795030 MtrunA17_Chr1g0186741 43.548 124 64 2 111 233 67 185 3.03e-14 70.9
Msa0795030 MtrunA17_Chr6g0473861 53.333 60 28 0 113 172 59 118 3.51e-14 71.6
Msa0795030 MtrunA17_Chr8g0378811 58.929 56 23 0 117 172 55 110 4.01e-14 71.2
Msa0795030 MtrunA17_Chr1g0184071 53.968 63 28 1 111 172 63 125 5.15e-14 69.3
Msa0795030 MtrunA17_Chr1g0184011 58.182 55 22 1 119 172 86 140 5.43e-14 70.1
Msa0795030 MtrunA17_Chr5g0396171 52.632 57 27 0 119 175 26 82 5.80e-14 67.0
Msa0795030 MtrunA17_Chr4g0042761 57.627 59 25 0 114 172 45 103 1.76e-13 70.1
Msa0795030 MtrunA17_Chr4g0057241 53.226 62 28 1 113 174 11 71 4.22e-13 66.6
Msa0795030 MtrunA17_Chr6g0461271 57.143 56 24 0 117 172 33 88 4.30e-13 68.9
Msa0795030 MtrunA17_Chr7g0261181 62.712 59 21 1 117 174 13 71 4.42e-13 65.5
Msa0795030 MtrunA17_Chr5g0398091 40.870 115 46 3 78 172 3 115 4.44e-13 67.8
Msa0795030 MtrunA17_Chr1g0200931 50.820 61 29 1 113 172 19 79 4.49e-13 65.5
Msa0795030 MtrunA17_Chr6g0461941 69.841 63 19 0 113 175 16 78 5.67e-13 67.0
Msa0795030 MtrunA17_Chr5g0398081 50.000 66 27 1 113 172 45 110 6.20e-13 67.0
Msa0795030 MtrunA17_Chr2g0321071 50.000 64 30 2 113 174 43 106 6.48e-13 67.0
Msa0795030 MtrunA17_Chr7g0261171 53.261 92 40 2 84 172 50 141 6.94e-13 67.0
Msa0795030 MtrunA17_Chr1g0183931 55.556 81 34 2 95 173 78 158 8.84e-13 67.0
Msa0795030 MtrunA17_Chr5g0398061 50.000 66 27 1 113 172 45 110 1.44e-12 66.2
Msa0795030 MtrunA17_Chr5g0396181 55.932 59 26 0 117 175 21 79 1.86e-12 65.1
Msa0795030 MtrunA17_Chr1g0183961 61.017 59 22 1 117 174 27 85 2.53e-12 63.9
Msa0795030 MtrunA17_Chr8g0345531 50.769 65 28 2 102 164 103 165 4.11e-12 66.2
Msa0795030 MtrunA17_Chr3g0142081 62.712 59 22 0 117 175 39 97 7.29e-12 64.3
Msa0795030 MtrunA17_Chr1g0170471 56.000 50 21 1 125 173 91 140 1.17e-11 62.4
Msa0795030 MtrunA17_Chr1g0209891 57.692 52 20 1 117 166 54 105 1.68e-11 63.9
Msa0795030 MtrunA17_Chr7g0261201 56.061 66 28 1 109 173 90 155 1.78e-11 63.2
Msa0795030 MtrunA17_Chr1g0205961 60.976 41 16 0 117 157 115 155 1.87e-11 64.3
Msa0795030 MtrunA17_Chr5g0424051 61.290 62 23 1 113 173 92 153 3.31e-11 63.2
Msa0795030 MtrunA17_Chr4g0057231 41.748 103 46 3 86 174 2 104 3.82e-11 60.5
Msa0795030 MtrunA17_Chr3g0083501 51.020 49 24 0 125 173 3 51 4.69e-11 58.2
Msa0795030 MtrunA17_Chr3g0114761 53.731 67 29 1 109 173 17 83 8.27e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795030 AT1G64380.1 49.848 329 135 11 8 318 18 334 3.50e-71 224
Msa0795030 AT1G78080.1 51.765 170 66 5 115 269 150 318 1.22e-44 155
Msa0795030 AT4G39780.1 61.765 102 38 1 108 209 84 184 3.29e-40 142
Msa0795030 AT1G22190.1 52.985 134 46 4 82 215 57 173 2.30e-39 139
Msa0795030 AT2G22200.1 61.458 96 28 1 114 209 68 154 1.82e-36 132
Msa0795030 AT1G36060.1 60.606 99 39 0 115 213 141 239 2.09e-36 133
Msa0795030 AT4G13620.1 39.706 204 73 5 115 318 230 383 8.81e-33 125
Msa0795030 AT5G65130.2 60.000 90 29 2 115 204 111 193 1.95e-30 116
Msa0795030 AT5G65130.1 60.000 90 29 2 115 204 109 191 2.14e-30 116
Msa0795030 AT2G20880.1 80.328 61 12 0 115 175 185 245 7.80e-29 113
Msa0795030 AT4G28140.1 74.576 59 15 0 115 173 141 199 7.38e-25 102
Msa0795030 AT2G47520.1 64.062 64 23 0 113 176 46 109 5.62e-23 94.0
Msa0795030 AT2G33710.2 48.214 112 42 3 72 181 39 136 6.11e-23 95.5
Msa0795030 AT2G33710.1 48.214 112 42 3 72 181 39 136 6.62e-23 95.1
Msa0795030 AT5G61890.1 50.538 93 30 1 97 173 54 146 8.98e-23 95.5
Msa0795030 AT5G13330.1 63.235 68 24 1 113 179 35 102 1.05e-22 94.4
Msa0795030 AT4G17500.1 61.644 73 27 1 102 173 133 205 7.70e-22 93.2
Msa0795030 AT3G16770.1 61.905 63 24 0 113 175 75 137 1.14e-21 92.4
Msa0795030 AT4G36900.1 51.852 81 39 0 95 175 8 88 1.40e-21 90.9
Msa0795030 AT1G71450.1 64.407 59 21 0 117 175 24 82 1.99e-21 90.1
Msa0795030 AT3G57600.1 58.904 73 30 0 117 189 28 100 2.27e-21 92.0
Msa0795030 AT2G44840.1 67.188 64 20 1 113 175 88 151 2.51e-21 90.9
Msa0795030 AT1G46768.1 64.516 62 22 0 114 175 28 89 2.76e-21 89.0
Msa0795030 AT1G46768.2 64.516 62 22 0 114 175 28 89 2.76e-21 89.0
Msa0795030 AT1G46768.3 64.516 62 22 0 114 175 28 89 3.46e-21 88.2
Msa0795030 AT4G11140.1 68.421 57 18 0 117 173 87 143 4.03e-21 91.7
Msa0795030 AT2G23340.1 65.574 61 21 0 115 175 26 86 4.48e-21 89.0
Msa0795030 AT4G06746.1 65.000 60 21 0 114 173 33 92 7.93e-21 87.4
Msa0795030 AT1G15360.1 64.407 59 21 0 115 173 5 63 1.02e-20 88.6
Msa0795030 AT1G15360.2 64.407 59 21 0 115 173 5 63 1.02e-20 88.6
Msa0795030 AT5G67190.1 46.939 98 50 1 113 208 17 114 1.12e-20 88.2
Msa0795030 AT1G74930.1 56.923 65 28 0 110 174 14 78 2.05e-20 87.8
Msa0795030 AT4G31060.1 51.220 82 40 0 97 178 7 88 2.42e-20 87.4
Msa0795030 AT4G27950.1 66.102 59 20 0 114 172 115 173 3.55e-20 89.7
Msa0795030 AT3G50260.1 58.730 63 26 0 113 175 17 79 4.80e-20 85.5
Msa0795030 AT1G19210.1 62.069 58 22 0 117 174 12 69 5.19e-20 86.3
Msa0795030 AT5G47220.1 67.742 62 19 1 113 173 113 174 6.91e-20 87.4
Msa0795030 AT5G21960.1 63.793 58 21 0 117 174 7 64 1.34e-19 85.9
Msa0795030 AT5G25390.2 59.677 62 25 0 115 176 5 66 1.38e-19 85.1
Msa0795030 AT4G23750.2 41.880 117 66 2 58 172 61 177 1.59e-19 88.2
Msa0795030 AT4G23750.1 41.880 117 66 2 58 172 61 177 1.59e-19 88.2
Msa0795030 AT5G51190.1 45.133 113 54 4 108 213 63 174 1.62e-19 85.9
Msa0795030 AT5G53290.1 65.517 58 20 0 115 172 123 180 1.70e-19 88.2
Msa0795030 AT5G25190.1 61.667 60 23 0 114 173 5 64 2.37e-19 84.3
Msa0795030 AT3G23230.1 65.079 63 21 1 113 174 16 78 2.99e-19 82.8
Msa0795030 AT3G61630.1 58.571 70 29 0 112 181 100 169 3.14e-19 87.0
Msa0795030 AT4G32800.1 57.143 63 27 0 113 175 15 77 3.94e-19 84.7
Msa0795030 AT5G11590.1 56.923 65 28 0 113 177 47 111 6.52e-19 84.7
Msa0795030 AT2G44940.1 60.317 63 25 0 113 175 96 158 7.18e-19 85.5
Msa0795030 AT2G35700.1 57.143 63 27 0 113 175 41 103 7.96e-19 83.2
Msa0795030 AT5G47230.1 62.319 69 25 1 106 173 145 213 7.99e-19 85.5
Msa0795030 AT4G18450.1 42.400 125 60 5 52 172 51 167 1.12e-18 85.1
Msa0795030 AT1G72360.1 60.345 58 23 0 117 174 25 82 1.93e-18 82.8
Msa0795030 AT3G16280.1 55.556 63 28 0 113 175 57 119 2.35e-18 83.2
Msa0795030 AT3G15210.1 48.276 87 36 1 89 175 6 83 2.56e-18 82.8
Msa0795030 AT1G72360.2 45.238 84 46 0 91 174 50 133 2.59e-18 83.6
Msa0795030 AT4G16750.1 45.652 92 48 1 84 175 9 98 2.76e-18 81.6
Msa0795030 AT1G72360.3 60.345 58 23 0 117 174 74 131 2.88e-18 83.2
Msa0795030 AT3G60490.1 61.017 59 23 0 117 175 71 129 3.37e-18 83.2
Msa0795030 AT3G11020.1 66.667 57 19 0 117 173 78 134 3.44e-18 84.3
Msa0795030 AT2G46310.1 62.500 56 21 0 117 172 99 154 4.30e-18 83.6
Msa0795030 AT1G21910.1 61.404 57 22 0 117 173 50 106 4.39e-18 82.0
Msa0795030 AT5G25810.1 55.556 63 28 0 113 175 32 94 4.61e-18 81.6
Msa0795030 AT3G16280.2 54.688 64 29 0 112 175 74 137 4.76e-18 82.4
Msa0795030 AT1G01250.1 53.226 62 29 0 113 174 41 102 7.56e-18 80.5
Msa0795030 AT5G25390.1 58.065 62 23 1 115 176 5 63 8.92e-18 80.1
Msa0795030 AT2G40340.2 59.322 59 24 0 117 175 14 72 1.09e-17 82.0
Msa0795030 AT2G40340.5 59.322 59 24 0 117 175 14 72 1.09e-17 82.0
Msa0795030 AT2G40340.4 59.322 59 24 0 117 175 14 72 1.09e-17 82.0
Msa0795030 AT4G17490.1 62.903 62 22 1 113 173 133 194 1.28e-17 82.0
Msa0795030 AT1G75490.1 63.158 57 21 0 117 173 42 98 1.37e-17 80.1
Msa0795030 AT5G05410.2 64.912 57 20 0 117 173 79 135 1.54e-17 82.0
Msa0795030 AT5G05410.1 64.912 57 20 0 117 173 79 135 1.58e-17 82.4
Msa0795030 AT4G25480.1 43.396 106 47 1 82 174 3 108 1.84e-17 80.1
Msa0795030 AT2G40340.3 59.322 59 24 0 117 175 72 130 2.47e-17 81.3
Msa0795030 AT2G36450.1 53.086 81 33 2 106 181 4 84 2.59e-17 79.0
Msa0795030 AT2G40340.1 59.322 59 24 0 117 175 72 130 2.73e-17 81.6
Msa0795030 AT2G40340.6 59.322 59 24 0 117 175 79 137 2.85e-17 81.6
Msa0795030 AT5G44210.1 57.377 61 26 0 113 173 29 89 3.68e-17 79.0
Msa0795030 AT5G07310.1 55.422 83 37 0 91 173 66 148 4.33e-17 80.1
Msa0795030 AT5G61600.1 60.000 60 23 1 115 173 86 145 4.57e-17 79.7
Msa0795030 AT4G25470.1 44.340 106 46 1 82 174 3 108 5.93e-17 78.6
Msa0795030 AT3G20310.1 45.977 87 36 1 87 173 8 83 8.11e-17 79.0
Msa0795030 AT4G25490.1 58.333 60 25 0 113 172 44 103 8.36e-17 78.2
Msa0795030 AT1G71130.1 51.190 84 32 2 114 188 76 159 1.03e-16 76.6
Msa0795030 AT1G03800.1 55.738 61 27 0 113 173 49 109 1.12e-16 78.6
Msa0795030 AT5G43410.1 62.712 59 21 1 117 174 15 73 1.18e-16 75.9
Msa0795030 AT3G23240.1 61.667 60 22 1 114 172 79 138 1.29e-16 77.8
Msa0795030 AT1G28360.1 57.143 63 26 1 112 173 6 68 1.59e-16 77.0
Msa0795030 AT1G28370.1 57.895 57 24 0 117 173 20 76 2.28e-16 75.9
Msa0795030 AT1G50640.1 56.452 62 27 0 112 173 23 84 2.30e-16 77.4
Msa0795030 AT1G28370.2 57.895 57 24 0 117 173 58 114 3.00e-16 76.6
Msa0795030 AT1G22810.1 50.769 65 30 1 117 179 14 78 6.12e-16 73.9
Msa0795030 AT5G18450.1 62.500 56 21 0 117 172 34 89 6.28e-16 77.4
Msa0795030 AT5G13910.1 61.111 54 21 0 119 172 22 75 1.01e-15 75.1
Msa0795030 AT2G31230.1 56.452 62 26 1 113 173 82 143 1.13e-15 75.9
Msa0795030 AT5G51990.1 56.667 60 26 0 113 172 50 109 1.38e-15 75.1
Msa0795030 AT1G12980.1 60.714 56 22 0 117 172 57 112 1.51e-15 76.6
Msa0795030 AT1G28160.1 60.714 56 22 0 117 172 39 94 1.68e-15 75.1
Msa0795030 AT5G07580.1 60.000 60 23 1 115 173 108 167 1.70e-15 74.3
Msa0795030 AT5G50080.1 50.000 100 45 2 74 173 39 133 1.76e-15 74.7
Msa0795030 AT5G50080.2 51.485 101 42 3 74 173 48 142 1.83e-15 74.7
Msa0795030 AT1G71520.1 50.794 63 27 1 117 175 14 76 1.90e-15 72.8
Msa0795030 AT1G22985.1 59.677 62 22 1 114 172 72 133 2.16e-15 73.2
Msa0795030 AT5G18560.1 57.143 56 24 0 117 172 55 110 5.41e-15 75.1
Msa0795030 AT2G40350.2 55.932 59 26 0 117 175 74 132 7.23e-15 71.6
Msa0795030 AT1G43160.1 68.852 61 19 0 113 173 57 117 7.83e-15 72.4
Msa0795030 AT1G24590.1 60.714 56 22 0 117 172 58 113 7.94e-15 74.3
Msa0795030 AT2G40350.1 55.932 59 26 0 117 175 67 125 1.05e-14 70.9
Msa0795030 AT5G19790.1 59.016 61 25 0 114 174 19 79 1.07e-14 73.2
Msa0795030 AT5G11190.1 63.333 60 22 0 117 176 7 66 3.33e-14 70.5
Msa0795030 AT1G63030.2 55.000 60 27 0 113 172 26 85 4.00e-14 70.1
Msa0795030 AT1G63030.1 55.000 60 27 0 113 172 26 85 4.00e-14 70.1
Msa0795030 AT4G34410.1 70.175 57 17 0 117 173 136 192 5.59e-14 71.2
Msa0795030 AT5G64750.1 61.111 54 20 1 124 176 192 245 1.08e-13 71.6
Msa0795030 AT1G33760.1 63.934 61 22 0 117 177 20 80 1.17e-13 68.9
Msa0795030 AT1G12890.1 55.357 56 25 0 117 172 21 76 1.18e-13 69.7
Msa0795030 AT1G12610.1 51.667 60 29 0 113 172 26 85 1.69e-13 68.9
Msa0795030 AT1G77640.1 59.091 66 25 1 112 175 36 101 3.18e-13 68.6
Msa0795030 AT1G77200.1 59.322 59 24 0 117 175 43 101 3.27e-13 68.6
Msa0795030 AT3G14230.2 40.909 110 46 1 89 179 77 186 3.72e-13 69.7
Msa0795030 AT2G38340.1 60.000 65 18 1 117 173 70 134 5.25e-13 68.2
Msa0795030 AT1G53910.1 46.809 94 40 1 113 206 121 204 7.17e-13 68.9
Msa0795030 AT1G53910.2 46.809 94 40 1 113 206 121 204 7.17e-13 68.9
Msa0795030 AT1G53910.3 46.809 94 40 1 113 206 119 202 7.30e-13 68.9
Msa0795030 AT3G14230.3 58.209 67 28 0 113 179 119 185 1.43e-12 68.2
Msa0795030 AT3G14230.1 58.209 67 28 0 113 179 124 190 1.79e-12 67.8
Msa0795030 AT2G40220.1 67.797 59 19 0 114 172 52 110 3.08e-12 67.0
Msa0795030 AT2G25820.1 41.379 145 71 3 116 255 25 160 4.24e-12 65.1
Msa0795030 AT3G25890.1 71.053 38 11 0 119 156 133 170 7.49e-12 65.9
Msa0795030 AT3G25890.2 71.053 38 11 0 119 156 133 170 7.49e-12 65.9
Msa0795030 AT1G68550.1 61.702 47 16 1 111 157 109 153 8.22e-12 65.5
Msa0795030 AT1G68550.2 61.702 47 16 1 111 157 109 153 8.22e-12 65.5
Msa0795030 AT1G06160.1 63.333 60 21 1 115 173 80 139 5.34e-11 62.4
Msa0795030 AT5G61590.1 62.069 58 21 1 117 173 107 164 9.64e-11 60.8

Find 53 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGTTGGATCTTTCAAATT+TGG 0.137255 5_3:+6900114 None:intergenic
TTGGGAAGTTCTTGCTGTTT+AGG 0.207034 5_3:-6899692 None:intergenic
CTGTTTCTGAGGATGGAATT+TGG 0.226527 5_3:-6899819 Msa0795030:CDS
TGTTCAAATCTTGAACCTTT+AGG 0.242120 5_3:-6900492 Msa0795030:CDS
TTCAAGTTCGTTCACTTCTT+TGG 0.254281 5_3:-6900328 Msa0795030:CDS
GATCCAACTAAGTTGGGTTT+TGG 0.259771 5_3:-6900102 Msa0795030:CDS
CACAAACAGCACAACCTTCT+TGG 0.270743 5_3:-6900517 Msa0795030:CDS
GACAGAGACACTGGGGAAAA+TGG 0.274624 5_3:-6900269 Msa0795030:CDS
TGGGAAGTTCTTGCTGTTTA+GGG 0.276754 5_3:-6899691 None:intergenic
CACAGAATAGAATGAGAGTT+TGG 0.304146 5_3:-6900227 Msa0795030:CDS
GGAATGCAAAACAGAGATAT+TGG 0.345452 5_3:-6900624 Msa0795030:CDS
ACCATTGTCGAAACCGAATT+CGG 0.358811 5_3:+6899781 None:intergenic
AGAACTTCCCAAATCAATTC+AGG 0.364637 5_3:+6899703 None:intergenic
AAGAAGATGAAGAAGAATTC+AGG 0.374931 5_3:-6899979 Msa0795030:CDS
TTTGAAAGATCCAACTAAGT+TGG 0.380517 5_3:-6900109 Msa0795030:CDS
AGGGGAGAATTCTCCGAATT+CGG 0.382016 5_3:-6899794 Msa0795030:CDS
ACAAACAGCACAACCTTCTT+GGG 0.390669 5_3:-6900516 Msa0795030:CDS
GAACGAATGAGCCGTTTAAT+CGG 0.390977 5_3:+6900415 None:intergenic
CACGAAGAAAGCCGATTAAA+CGG 0.400408 5_3:-6900426 Msa0795030:CDS
TTGAAAGATCCAACTAAGTT+GGG 0.405515 5_3:-6900108 Msa0795030:CDS
CGTTTAATCGGCTTTCTTCG+TGG 0.429966 5_3:+6900427 None:intergenic
CCATTTGTCAAAAGGTGAAA+AGG 0.430613 5_3:-6900026 Msa0795030:CDS
TTTGTGGTGGTGTTTGTTGA+AGG 0.430916 5_3:+6900534 None:intergenic
TGAAATTGAACTTGAATTTG+TGG 0.433256 5_3:+6900347 None:intergenic
CAAGAAGGTTGTGCTGTTTG+TGG 0.437269 5_3:+6900518 None:intergenic
CTGAGGATGGAATTTGGAAA+GGG 0.444826 5_3:-6899813 Msa0795030:CDS
AATTCAAGCCATTTGTCAAA+AGG 0.454534 5_3:-6900034 Msa0795030:CDS
TCTCCAAAACCCAACTTAGT+TGG 0.464313 5_3:+6900099 None:intergenic
ACAGAGACACTGGGGAAAAT+GGG 0.468350 5_3:-6900268 Msa0795030:CDS
TCACCAACTGTTTCTGAGGA+TGG 0.477469 5_3:-6899826 Msa0795030:CDS
TCCGAATTCGGTTTCGACAA+TGG 0.480538 5_3:-6899782 Msa0795030:CDS
ATCAATTCAGGATCAAAAGA+TGG 0.507401 5_3:+6899715 None:intergenic
GAGGAGTGAGACAGAGACAC+TGG 0.514041 5_3:-6900278 Msa0795030:CDS
CGTGCAGCTTATAAGCTTCG+AGG 0.521878 5_3:-6900159 Msa0795030:CDS
CATTTGTCAAAAGGTGAAAA+GGG 0.524038 5_3:-6900025 Msa0795030:CDS
GTAAAATATCTCTCTGGCGA+AGG 0.525538 5_3:+6900457 None:intergenic
AAAAGATGGCATTCTTGCTA+AGG 0.531887 5_3:+6899729 None:intergenic
GATTGATGTGAAAATGAAGA+TGG 0.537801 5_3:+6900393 None:intergenic
TCTGAGGATGGAATTTGGAA+AGG 0.539276 5_3:-6899814 Msa0795030:CDS
TGAGGATGGAATTTGGAAAG+GGG 0.545281 5_3:-6899812 Msa0795030:CDS
AAGATTTGAACAGCCCAAGA+AGG 0.553206 5_3:+6900503 None:intergenic
AGGAGTGAGACAGAGACACT+GGG 0.570341 5_3:-6900277 Msa0795030:CDS
GAATTTGTGGTGTATAGTGA+AGG 0.573240 5_3:+6900360 None:intergenic
AATAGAATGAGAGTTTGGCT+TGG 0.577666 5_3:-6900222 Msa0795030:CDS
GAAGGTTGTGCTGTTTGTGG+TGG 0.591819 5_3:+6900521 None:intergenic
CAAACTCTCATTCTATTCTG+TGG 0.612245 5_3:+6900228 None:intergenic
AGGTAAACAGAGGAACCTAA+AGG 0.613113 5_3:+6900477 None:intergenic
CCTAATACCATAATCATGGA+GGG 0.618078 5_3:-6900645 None:intergenic
ATTCCATCCTCAGAAACAGT+TGG 0.628763 5_3:+6899823 None:intergenic
AATTTGTGGTGTATAGTGAA+GGG 0.636368 5_3:+6900361 None:intergenic
GGTTTCGACAATGGTGACAG+AGG 0.648753 5_3:-6899773 Msa0795030:CDS
GGAGTGAGACAGAGACACTG+GGG 0.720682 5_3:-6900276 Msa0795030:CDS
TCTCTGGCGAAGGTAAACAG+AGG 0.752181 5_3:+6900467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTGTAAAATATCTCTC+TGG + chr5_3:6899875-6899894 None:intergenic 20.0%
!!! ATTTTTGTAAAATATCTCTC+TGG + chr5_3:6899875-6899894 None:intergenic 20.0%
! TGAAATTGAACTTGAATTTG+TGG + chr5_3:6899979-6899998 None:intergenic 25.0%
! TTAGTTGGATCTTTCAAATT+TGG + chr5_3:6900212-6900231 None:intergenic 25.0%
!!! TCTTGTTTTTTGTGATGATT+GGG - chr5_3:6900460-6900479 Msa0795030:CDS 25.0%
!!! TTTTGATCCTGAATTGATTT+GGG - chr5_3:6900613-6900632 Msa0795030:CDS 25.0%
! TGAAATTGAACTTGAATTTG+TGG + chr5_3:6899979-6899998 None:intergenic 25.0%
! TTAGTTGGATCTTTCAAATT+TGG + chr5_3:6900212-6900231 None:intergenic 25.0%
!!! TCTTGTTTTTTGTGATGATT+GGG - chr5_3:6900460-6900479 Msa0795030:CDS 25.0%
!!! TTTTGATCCTGAATTGATTT+GGG - chr5_3:6900613-6900632 Msa0795030:CDS 25.0%
TGTTCAAATCTTGAACCTTT+AGG - chr5_3:6899831-6899850 Msa0795030:CDS 30.0%
GATTGATGTGAAAATGAAGA+TGG + chr5_3:6899933-6899952 None:intergenic 30.0%
AATTTGTGGTGTATAGTGAA+GGG + chr5_3:6899965-6899984 None:intergenic 30.0%
!! CTGTATAGCTTTTTCTTACA+AGG + chr5_3:6900026-6900045 None:intergenic 30.0%
TGTAAGAAAAAGCTATACAG+AGG - chr5_3:6900026-6900045 Msa0795030:CDS 30.0%
TTTGAAAGATCCAACTAAGT+TGG - chr5_3:6900214-6900233 Msa0795030:CDS 30.0%
TTGAAAGATCCAACTAAGTT+GGG - chr5_3:6900215-6900234 Msa0795030:CDS 30.0%
AATTCAAGCCATTTGTCAAA+AGG - chr5_3:6900289-6900308 Msa0795030:CDS 30.0%
CATTTGTCAAAAGGTGAAAA+GGG - chr5_3:6900298-6900317 Msa0795030:CDS 30.0%
AAGAAGATGAAGAAGAATTC+AGG - chr5_3:6900344-6900363 Msa0795030:CDS 30.0%
CAATCATCACAAAAAACAAG+AGG + chr5_3:6900461-6900480 None:intergenic 30.0%
!!! CTCTTGTTTTTTGTGATGAT+TGG - chr5_3:6900459-6900478 Msa0795030:CDS 30.0%
ATCAATTCAGGATCAAAAGA+TGG + chr5_3:6900611-6900630 None:intergenic 30.0%
! CTTTTGATCCTGAATTGATT+TGG - chr5_3:6900612-6900631 Msa0795030:CDS 30.0%
TGTTCAAATCTTGAACCTTT+AGG - chr5_3:6899831-6899850 Msa0795030:CDS 30.0%
GATTGATGTGAAAATGAAGA+TGG + chr5_3:6899933-6899952 None:intergenic 30.0%
AATTTGTGGTGTATAGTGAA+GGG + chr5_3:6899965-6899984 None:intergenic 30.0%
!! CTGTATAGCTTTTTCTTACA+AGG + chr5_3:6900026-6900045 None:intergenic 30.0%
TGTAAGAAAAAGCTATACAG+AGG - chr5_3:6900026-6900045 Msa0795030:CDS 30.0%
TTTGAAAGATCCAACTAAGT+TGG - chr5_3:6900214-6900233 Msa0795030:CDS 30.0%
TTGAAAGATCCAACTAAGTT+GGG - chr5_3:6900215-6900234 Msa0795030:CDS 30.0%
AATTCAAGCCATTTGTCAAA+AGG - chr5_3:6900289-6900308 Msa0795030:CDS 30.0%
CATTTGTCAAAAGGTGAAAA+GGG - chr5_3:6900298-6900317 Msa0795030:CDS 30.0%
AAGAAGATGAAGAAGAATTC+AGG - chr5_3:6900344-6900363 Msa0795030:CDS 30.0%
CAATCATCACAAAAAACAAG+AGG + chr5_3:6900461-6900480 None:intergenic 30.0%
!!! CTCTTGTTTTTTGTGATGAT+TGG - chr5_3:6900459-6900478 Msa0795030:CDS 30.0%
ATCAATTCAGGATCAAAAGA+TGG + chr5_3:6900611-6900630 None:intergenic 30.0%
! CTTTTGATCCTGAATTGATT+TGG - chr5_3:6900612-6900631 Msa0795030:CDS 30.0%
GGAATGCAAAACAGAGATAT+TGG - chr5_3:6899699-6899718 Msa0795030:CDS 35.0%
GAATTTGTGGTGTATAGTGA+AGG + chr5_3:6899966-6899985 None:intergenic 35.0%
! TTCAAGTTCGTTCACTTCTT+TGG - chr5_3:6899995-6900014 Msa0795030:CDS 35.0%
CAAACTCTCATTCTATTCTG+TGG + chr5_3:6900098-6900117 None:intergenic 35.0%
CACAGAATAGAATGAGAGTT+TGG - chr5_3:6900096-6900115 Msa0795030:CDS 35.0%
AATAGAATGAGAGTTTGGCT+TGG - chr5_3:6900101-6900120 Msa0795030:CDS 35.0%
! CCTTTTCACCTTTTGACAAA+TGG + chr5_3:6900300-6900319 None:intergenic 35.0%
CCATTTGTCAAAAGGTGAAA+AGG - chr5_3:6900297-6900316 Msa0795030:CDS 35.0%
AAAAGATGGCATTCTTGCTA+AGG + chr5_3:6900597-6900616 None:intergenic 35.0%
AGAACTTCCCAAATCAATTC+AGG + chr5_3:6900623-6900642 None:intergenic 35.0%
GGAATGCAAAACAGAGATAT+TGG - chr5_3:6899699-6899718 Msa0795030:CDS 35.0%
GAATTTGTGGTGTATAGTGA+AGG + chr5_3:6899966-6899985 None:intergenic 35.0%
! TTCAAGTTCGTTCACTTCTT+TGG - chr5_3:6899995-6900014 Msa0795030:CDS 35.0%
CAAACTCTCATTCTATTCTG+TGG + chr5_3:6900098-6900117 None:intergenic 35.0%
CACAGAATAGAATGAGAGTT+TGG - chr5_3:6900096-6900115 Msa0795030:CDS 35.0%
AATAGAATGAGAGTTTGGCT+TGG - chr5_3:6900101-6900120 Msa0795030:CDS 35.0%
! CCTTTTCACCTTTTGACAAA+TGG + chr5_3:6900300-6900319 None:intergenic 35.0%
CCATTTGTCAAAAGGTGAAA+AGG - chr5_3:6900297-6900316 Msa0795030:CDS 35.0%
AAAAGATGGCATTCTTGCTA+AGG + chr5_3:6900597-6900616 None:intergenic 35.0%
AGAACTTCCCAAATCAATTC+AGG + chr5_3:6900623-6900642 None:intergenic 35.0%
! TTTGTGGTGGTGTTTGTTGA+AGG + chr5_3:6899792-6899811 None:intergenic 40.0%
ACAAACAGCACAACCTTCTT+GGG - chr5_3:6899807-6899826 Msa0795030:CDS 40.0%
AAGATTTGAACAGCCCAAGA+AGG + chr5_3:6899823-6899842 None:intergenic 40.0%
AGGTAAACAGAGGAACCTAA+AGG + chr5_3:6899849-6899868 None:intergenic 40.0%
GTAAAATATCTCTCTGGCGA+AGG + chr5_3:6899869-6899888 None:intergenic 40.0%
CACGAAGAAAGCCGATTAAA+CGG - chr5_3:6899897-6899916 Msa0795030:CDS 40.0%
GAACGAATGAGCCGTTTAAT+CGG + chr5_3:6899911-6899930 None:intergenic 40.0%
!! GATCCAACTAAGTTGGGTTT+TGG - chr5_3:6900221-6900240 Msa0795030:CDS 40.0%
TCTCCAAAACCCAACTTAGT+TGG + chr5_3:6900227-6900246 None:intergenic 40.0%
CAAAAAACAAGAGGCGAAAG+TGG + chr5_3:6900452-6900471 None:intergenic 40.0%
!!! GTTTTCACCAACTGTTTCTG+AGG - chr5_3:6900493-6900512 Msa0795030:CDS 40.0%
ATTCCATCCTCAGAAACAGT+TGG + chr5_3:6900503-6900522 None:intergenic 40.0%
!! CTGTTTCTGAGGATGGAATT+TGG - chr5_3:6900504-6900523 Msa0795030:CDS 40.0%
TCTGAGGATGGAATTTGGAA+AGG - chr5_3:6900509-6900528 Msa0795030:CDS 40.0%
CTGAGGATGGAATTTGGAAA+GGG - chr5_3:6900510-6900529 Msa0795030:CDS 40.0%
TGAGGATGGAATTTGGAAAG+GGG - chr5_3:6900511-6900530 Msa0795030:CDS 40.0%
ACCATTGTCGAAACCGAATT+CGG + chr5_3:6900545-6900564 None:intergenic 40.0%
! TTTGTGGTGGTGTTTGTTGA+AGG + chr5_3:6899792-6899811 None:intergenic 40.0%
ACAAACAGCACAACCTTCTT+GGG - chr5_3:6899807-6899826 Msa0795030:CDS 40.0%
AAGATTTGAACAGCCCAAGA+AGG + chr5_3:6899823-6899842 None:intergenic 40.0%
AGGTAAACAGAGGAACCTAA+AGG + chr5_3:6899849-6899868 None:intergenic 40.0%
GTAAAATATCTCTCTGGCGA+AGG + chr5_3:6899869-6899888 None:intergenic 40.0%
CACGAAGAAAGCCGATTAAA+CGG - chr5_3:6899897-6899916 Msa0795030:CDS 40.0%
GAACGAATGAGCCGTTTAAT+CGG + chr5_3:6899911-6899930 None:intergenic 40.0%
!! GATCCAACTAAGTTGGGTTT+TGG - chr5_3:6900221-6900240 Msa0795030:CDS 40.0%
TCTCCAAAACCCAACTTAGT+TGG + chr5_3:6900227-6900246 None:intergenic 40.0%
CAAAAAACAAGAGGCGAAAG+TGG + chr5_3:6900452-6900471 None:intergenic 40.0%
!!! GTTTTCACCAACTGTTTCTG+AGG - chr5_3:6900493-6900512 Msa0795030:CDS 40.0%
ATTCCATCCTCAGAAACAGT+TGG + chr5_3:6900503-6900522 None:intergenic 40.0%
!! CTGTTTCTGAGGATGGAATT+TGG - chr5_3:6900504-6900523 Msa0795030:CDS 40.0%
TCTGAGGATGGAATTTGGAA+AGG - chr5_3:6900509-6900528 Msa0795030:CDS 40.0%
CTGAGGATGGAATTTGGAAA+GGG - chr5_3:6900510-6900529 Msa0795030:CDS 40.0%
TGAGGATGGAATTTGGAAAG+GGG - chr5_3:6900511-6900530 Msa0795030:CDS 40.0%
ACCATTGTCGAAACCGAATT+CGG + chr5_3:6900545-6900564 None:intergenic 40.0%
!! CAAGAAGGTTGTGCTGTTTG+TGG + chr5_3:6899808-6899827 None:intergenic 45.0%
CACAAACAGCACAACCTTCT+TGG - chr5_3:6899806-6899825 Msa0795030:CDS 45.0%
! CGTTTAATCGGCTTTCTTCG+TGG + chr5_3:6899899-6899918 None:intergenic 45.0%
ACAGAGACACTGGGGAAAAT+GGG - chr5_3:6900055-6900074 Msa0795030:CDS 45.0%
!! TCACCAACTGTTTCTGAGGA+TGG - chr5_3:6900497-6900516 Msa0795030:CDS 45.0%
AGGGGAGAATTCTCCGAATT+CGG - chr5_3:6900529-6900548 Msa0795030:CDS 45.0%
TCCGAATTCGGTTTCGACAA+TGG - chr5_3:6900541-6900560 Msa0795030:CDS 45.0%
!! CAAGAAGGTTGTGCTGTTTG+TGG + chr5_3:6899808-6899827 None:intergenic 45.0%
CACAAACAGCACAACCTTCT+TGG - chr5_3:6899806-6899825 Msa0795030:CDS 45.0%
! CGTTTAATCGGCTTTCTTCG+TGG + chr5_3:6899899-6899918 None:intergenic 45.0%
ACAGAGACACTGGGGAAAAT+GGG - chr5_3:6900055-6900074 Msa0795030:CDS 45.0%
!! TCACCAACTGTTTCTGAGGA+TGG - chr5_3:6900497-6900516 Msa0795030:CDS 45.0%
AGGGGAGAATTCTCCGAATT+CGG - chr5_3:6900529-6900548 Msa0795030:CDS 45.0%
TCCGAATTCGGTTTCGACAA+TGG - chr5_3:6900541-6900560 Msa0795030:CDS 45.0%
!! GAAGGTTGTGCTGTTTGTGG+TGG + chr5_3:6899805-6899824 None:intergenic 50.0%
TCTCTGGCGAAGGTAAACAG+AGG + chr5_3:6899859-6899878 None:intergenic 50.0%
AGGAGTGAGACAGAGACACT+GGG - chr5_3:6900046-6900065 Msa0795030:CDS 50.0%
GACAGAGACACTGGGGAAAA+TGG - chr5_3:6900054-6900073 Msa0795030:CDS 50.0%
CGTGCAGCTTATAAGCTTCG+AGG - chr5_3:6900164-6900183 Msa0795030:CDS 50.0%
GGTTTCGACAATGGTGACAG+AGG - chr5_3:6900550-6900569 Msa0795030:CDS 50.0%
!! GAAGGTTGTGCTGTTTGTGG+TGG + chr5_3:6899805-6899824 None:intergenic 50.0%
TCTCTGGCGAAGGTAAACAG+AGG + chr5_3:6899859-6899878 None:intergenic 50.0%
AGGAGTGAGACAGAGACACT+GGG - chr5_3:6900046-6900065 Msa0795030:CDS 50.0%
GACAGAGACACTGGGGAAAA+TGG - chr5_3:6900054-6900073 Msa0795030:CDS 50.0%
CGTGCAGCTTATAAGCTTCG+AGG - chr5_3:6900164-6900183 Msa0795030:CDS 50.0%
GGTTTCGACAATGGTGACAG+AGG - chr5_3:6900550-6900569 Msa0795030:CDS 50.0%
GAGGAGTGAGACAGAGACAC+TGG - chr5_3:6900045-6900064 Msa0795030:CDS 55.0%
GGAGTGAGACAGAGACACTG+GGG - chr5_3:6900047-6900066 Msa0795030:CDS 55.0%
GAGGAGTGAGACAGAGACAC+TGG - chr5_3:6900045-6900064 Msa0795030:CDS 55.0%
GGAGTGAGACAGAGACACTG+GGG - chr5_3:6900047-6900066 Msa0795030:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 6899693 6900652 6899693 ID=Msa0795030;Name=Msa0795030
chr5_3 mRNA 6899693 6900652 6899693 ID=Msa0795030-mRNA-1;Parent=Msa0795030;Name=Msa0795030-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|319
chr5_3 exon 6899693 6900652 6899693 ID=Msa0795030-mRNA-1:exon:2853;Parent=Msa0795030-mRNA-1
chr5_3 CDS 6899693 6900652 6899693 ID=Msa0795030-mRNA-1:cds;Parent=Msa0795030-mRNA-1
Gene Sequence

>Msa0795030

ATGGAGGGAATGCAAAACAGAGATATTGGATCATGTTTATCAAATCTCATATTATCAAGTTCAACAAACACACTTGACTCTATTTTCTCAGATATTCCTTCAACAAACACCACCACAAACAGCACAACCTTCTTGGGCTGTTCAAATCTTGAACCTTTAGGTTCCTCTGTTTACCTTCGCCAGAGAGATATTTTACAAAAATTCCACGAAGAAAGCCGATTAAACGGCTCATTCGTTCCATCTTCATTTTCACATCAATCTCTACTAAACCCTTCACTATACACCACAAATTCAAGTTCAATTTCAAGTTCGTTCACTTCTTTGGTGAATCCTTGTAAGAAAAAGCTATACAGAGGAGTGAGACAGAGACACTGGGGAAAATGGGTAGCTGAGATTAGACTTCCACAGAATAGAATGAGAGTTTGGCTTGGAACTTATGAAACTGCTGAAGCTGCAGCTTATGCTTATGATCGTGCAGCTTATAAGCTTCGAGGCGAATACGCGCGTTTAAATTTTCCAAATTTGAAAGATCCAACTAAGTTGGGTTTTGGAGATTCTACTAGATTGAATGCTTTGAAGAATTCTGTTGATGCTAAAATTCAAGCCATTTGTCAAAAGGTGAAAAGGGAAAAAGCTAAAAAGATTGCTGCAAAGAAGATGAAGAAGAATTCAGGTAGTAGTAATGATACAAAGAGTGATAAAAATTCAGACAAGATTATTAATTCATCTTCTTGTTCTTCTTCTTCGTCTTCGTTACCACTTTCGCCTCTTGTTTTTTGTGATGATTGGGTGAATGAATTGTTTTCACCAACTGTTTCTGAGGATGGAATTTGGAAAGGGGAGAATTCTCCGAATTCGGTTTCGACAATGGTGACAGAGGAAACAGAGTTTGAAGATTGTTCCTTAGCAAGAATGCCATCTTTTGATCCTGAATTGATTTGGGAAGTTCTTGCTGTTTAG
Protein sequence

>Msa0795030

MEGMQNRDIGSCLSNLILSSSTNTLDSIFSDIPSTNTTTNSTTFLGCSNLEPLGSSVYLRQRDILQKFHEESRLNGSFVPSSFSHQSLLNPSLYTTNSSSISSSFTSLVNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSTRLNALKNSVDAKIQAICQKVKREKAKKIAAKKMKKNSGSSNDTKSDKNSDKIINSSSCSSSSSSLPLSPLVFCDDWVNELFSPTVSEDGIWKGENSPNSVSTMVTEETEFEDCSLARMPSFDPELIWEVLAV*