Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182280 | XP_013470130.1 | 95.000 | 220 | 7 | 1 | 1 | 220 | 1 | 216 | 7.43e-146 | 415 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182280 | G8A288 | 95.000 | 220 | 7 | 1 | 1 | 220 | 1 | 216 | 3.55e-146 | 415 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000490 | Msa0182280 | -0.846495 | 2.096220e-59 | -8.615850e-47 |
Msa0004060 | Msa0182280 | 0.830588 | 2.699427e-55 | -8.615850e-47 |
Msa0006290 | Msa0182280 | 0.818471 | 1.927097e-52 | -8.615850e-47 |
Msa0006880 | Msa0182280 | 0.837440 | 5.192028e-57 | -8.615850e-47 |
Msa0010820 | Msa0182280 | 0.826068 | 3.322584e-54 | -8.615850e-47 |
Msa0015680 | Msa0182280 | 0.825968 | 3.509707e-54 | -8.615850e-47 |
Msa0026150 | Msa0182280 | 0.816905 | 4.346512e-52 | -8.615850e-47 |
Msa0026660 | Msa0182280 | 0.800468 | 1.421309e-48 | -8.615850e-47 |
Msa0027580 | Msa0182280 | 0.854411 | 1.253348e-61 | -8.615850e-47 |
Msa0029260 | Msa0182280 | 0.814778 | 1.295334e-51 | -8.615850e-47 |
Msa0033880 | Msa0182280 | 0.809307 | 2.019154e-50 | -8.615850e-47 |
Msa0036370 | Msa0182280 | 0.808356 | 3.223961e-50 | -8.615850e-47 |
Msa0041970 | Msa0182280 | 0.807665 | 4.522859e-50 | -8.615850e-47 |
Msa0043170 | Msa0182280 | 0.949802 | 6.074103e-108 | -8.615850e-47 |
Msa0047160 | Msa0182280 | 0.802905 | 4.494242e-49 | -8.615850e-47 |
Msa0047820 | Msa0182280 | 0.808923 | 2.439619e-50 | -8.615850e-47 |
Msa0054930 | Msa0182280 | 0.816037 | 6.799587e-52 | -8.615850e-47 |
Msa0055100 | Msa0182280 | 0.804827 | 1.792222e-49 | -8.615850e-47 |
Msa0055150 | Msa0182280 | 0.823067 | 1.691143e-53 | -8.615850e-47 |
Msa0057140 | Msa0182280 | 0.831431 | 1.675515e-55 | -8.615850e-47 |
Msa0065010 | Msa0182280 | 0.822271 | 2.589463e-53 | -8.615850e-47 |
Msa0068760 | Msa0182280 | 0.800544 | 1.371238e-48 | -8.615850e-47 |
Msa0073700 | Msa0182280 | 0.815745 | 7.896692e-52 | -8.615850e-47 |
Msa0075340 | Msa0182280 | 0.853702 | 2.006977e-61 | -8.615850e-47 |
Msa0077010 | Msa0182280 | 0.819364 | 1.207455e-52 | -8.615850e-47 |
Msa0090030 | Msa0182280 | 0.808847 | 2.532140e-50 | -8.615850e-47 |
Msa0095010 | Msa0182280 | 0.808902 | 2.465063e-50 | -8.615850e-47 |
Msa0100300 | Msa0182280 | 0.814611 | 1.410568e-51 | -8.615850e-47 |
Msa0100800 | Msa0182280 | 0.839058 | 1.987909e-57 | -8.615850e-47 |
Msa0101180 | Msa0182280 | 0.812812 | 3.512374e-51 | -8.615850e-47 |
Msa0104610 | Msa0182280 | 0.809162 | 2.168118e-50 | -8.615850e-47 |
Msa0108870 | Msa0182280 | 0.829189 | 5.916490e-55 | -8.615850e-47 |
Msa0120540 | Msa0182280 | 0.803860 | 2.849486e-49 | -8.615850e-47 |
Msa0126770 | Msa0182280 | 0.808593 | 2.869852e-50 | -8.615850e-47 |
Msa0127040 | Msa0182280 | 0.831149 | 1.966427e-55 | -8.615850e-47 |
Msa0127850 | Msa0182280 | 0.800275 | 1.555708e-48 | -8.615850e-47 |
Msa0131450 | Msa0182280 | 0.836760 | 7.746292e-57 | -8.615850e-47 |
Msa0136390 | Msa0182280 | 0.828111 | 1.078074e-54 | -8.615850e-47 |
Msa0137040 | Msa0182280 | 0.874999 | 4.351851e-68 | -8.615850e-47 |
Msa0138160 | Msa0182280 | 0.839979 | 1.146055e-57 | -8.615850e-47 |
Msa0140400 | Msa0182280 | 0.816991 | 4.157457e-52 | -8.615850e-47 |
Msa0140520 | Msa0182280 | -0.822162 | 2.744701e-53 | -8.615850e-47 |
Msa0145150 | Msa0182280 | 0.801427 | 9.052017e-49 | -8.615850e-47 |
Msa0146770 | Msa0182280 | 0.815678 | 8.173872e-52 | -8.615850e-47 |
Msa0154770 | Msa0182280 | 0.812165 | 4.862402e-51 | -8.615850e-47 |
Msa0165950 | Msa0182280 | 0.827897 | 1.213728e-54 | -8.615850e-47 |
Msa0166750 | Msa0182280 | 0.820237 | 7.625556e-53 | -8.615850e-47 |
Msa0167480 | Msa0182280 | 0.819824 | 9.483169e-53 | -8.615850e-47 |
Msa0169300 | Msa0182280 | 0.809513 | 1.823249e-50 | -8.615850e-47 |
Msa0174000 | Msa0182280 | 0.811029 | 8.588490e-51 | -8.615850e-47 |
Msa0175200 | Msa0182280 | 0.811527 | 6.696300e-51 | -8.615850e-47 |
Msa0177230 | Msa0182280 | 0.819127 | 1.367466e-52 | -8.615850e-47 |
Msa0177270 | Msa0182280 | 0.837835 | 4.110975e-57 | -8.615850e-47 |
Msa0177700 | Msa0182280 | -0.810012 | 1.423842e-50 | -8.615850e-47 |
Msa0178990 | Msa0182280 | 0.844984 | 5.386350e-59 | -8.615850e-47 |
Msa0180120 | Msa0182280 | 0.802823 | 4.671527e-49 | -8.615850e-47 |
Msa0182280 | Msa0183460 | 0.836686 | 8.088717e-57 | -8.615850e-47 |
Msa0182280 | Msa0193600 | 0.815018 | 1.145980e-51 | -8.615850e-47 |
Msa0182280 | Msa0199690 | 0.821272 | 4.410730e-53 | -8.615850e-47 |
Msa0182280 | Msa0208810 | 0.806323 | 8.698676e-50 | -8.615850e-47 |
Msa0182280 | Msa0211650 | 0.811580 | 6.521671e-51 | -8.615850e-47 |
Msa0182280 | Msa0212750 | -0.812686 | 3.741384e-51 | -8.615850e-47 |
Msa0182280 | Msa0219250 | -0.814489 | 1.501468e-51 | -8.615850e-47 |
Msa0182280 | Msa0221600 | 0.809503 | 1.832461e-50 | -8.615850e-47 |
Msa0182280 | Msa0226470 | 0.830864 | 2.310194e-55 | -8.615850e-47 |
Msa0182280 | Msa0227310 | -0.808898 | 2.469772e-50 | -8.615850e-47 |
Msa0182280 | Msa0236270 | 0.810953 | 8.921173e-51 | -8.615850e-47 |
Msa0182280 | Msa0239490 | 0.816931 | 4.286511e-52 | -8.615850e-47 |
Msa0182280 | Msa0239940 | 0.829109 | 6.186678e-55 | -8.615850e-47 |
Msa0182280 | Msa0242680 | 0.808289 | 3.331365e-50 | -8.615850e-47 |
Msa0182280 | Msa0251770 | 0.800176 | 1.629655e-48 | -8.615850e-47 |
Msa0182280 | Msa0252240 | 0.816870 | 4.423914e-52 | -8.615850e-47 |
Msa0182280 | Msa0258880 | -0.809392 | 1.936124e-50 | -8.615850e-47 |
Msa0182280 | Msa0262480 | 0.801234 | 9.912887e-49 | -8.615850e-47 |
Msa0182280 | Msa0266210 | 0.805484 | 1.305620e-49 | -8.615850e-47 |
Msa0182280 | Msa0273650 | 0.811588 | 6.494695e-51 | -8.615850e-47 |
Msa0182280 | Msa0275400 | -0.806417 | 8.308868e-50 | -8.615850e-47 |
Msa0182280 | Msa0280430 | 0.842355 | 2.720764e-58 | -8.615850e-47 |
Msa0182280 | Msa0284960 | 0.804986 | 1.660176e-49 | -8.615850e-47 |
Msa0182280 | Msa0287670 | 0.808334 | 3.259692e-50 | -8.615850e-47 |
Msa0182280 | Msa0288730 | 0.815756 | 7.852816e-52 | -8.615850e-47 |
Msa0182280 | Msa0291520 | 0.851533 | 8.342472e-61 | -8.615850e-47 |
Msa0182280 | Msa0302650 | 0.804670 | 1.932795e-49 | -8.615850e-47 |
Msa0182280 | Msa0304330 | 0.800855 | 1.184933e-48 | -8.615850e-47 |
Msa0182280 | Msa0304660 | 0.804111 | 2.526564e-49 | -8.615850e-47 |
Msa0182280 | Msa0308200 | 0.813326 | 2.708713e-51 | -8.615850e-47 |
Msa0182280 | Msa0308220 | 0.842377 | 2.683381e-58 | -8.615850e-47 |
Msa0182280 | Msa0310410 | 0.810039 | 1.405289e-50 | -8.615850e-47 |
Msa0182280 | Msa0320610 | 0.814231 | 1.711770e-51 | -8.615850e-47 |
Msa0182280 | Msa0328210 | 0.818904 | 1.536144e-52 | -8.615850e-47 |
Msa0182280 | Msa0331700 | 0.802564 | 5.284419e-49 | -8.615850e-47 |
Msa0182280 | Msa0370160 | -0.816461 | 5.465221e-52 | -8.615850e-47 |
Msa0182280 | Msa0376690 | 0.826941 | 2.057116e-54 | -8.615850e-47 |
Msa0182280 | Msa0381700 | 0.820547 | 6.476690e-53 | -8.615850e-47 |
Msa0182280 | Msa0384880 | 0.819315 | 1.238979e-52 | -8.615850e-47 |
Msa0182280 | Msa0387910 | 0.843345 | 1.483411e-58 | -8.615850e-47 |
Msa0182280 | Msa0392940 | 0.805121 | 1.555146e-49 | -8.615850e-47 |
Msa0182280 | Msa0394400 | 0.815971 | 7.033371e-52 | -8.615850e-47 |
Msa0182280 | Msa0419520 | 0.821774 | 3.376711e-53 | -8.615850e-47 |
Msa0182280 | Msa0419640 | -0.843333 | 1.494357e-58 | -8.615850e-47 |
Msa0182280 | Msa0421260 | 0.826824 | 2.194062e-54 | -8.615850e-47 |
Msa0182280 | Msa0426810 | 0.803276 | 3.766740e-49 | -8.615850e-47 |
Msa0182280 | Msa0436200 | 0.852544 | 4.306997e-61 | -8.615850e-47 |
Msa0182280 | Msa0437690 | -0.816263 | 6.051299e-52 | -8.615850e-47 |
Msa0182280 | Msa0441800 | 0.804845 | 1.776564e-49 | -8.615850e-47 |
Msa0182280 | Msa0465550 | 0.826213 | 3.068167e-54 | -8.615850e-47 |
Msa0182280 | Msa0469910 | -0.836019 | 1.195779e-56 | -8.615850e-47 |
Msa0182280 | Msa0471590 | 0.817667 | 2.928421e-52 | -8.615850e-47 |
Msa0182280 | Msa0474700 | 0.840829 | 6.866964e-58 | -8.615850e-47 |
Msa0182280 | Msa0493920 | 0.852406 | 4.715535e-61 | -8.615850e-47 |
Msa0182280 | Msa0505150 | 0.806878 | 6.641241e-50 | -8.615850e-47 |
Msa0182280 | Msa0509950 | -0.810747 | 9.885287e-51 | -8.615850e-47 |
Msa0182280 | Msa0511490 | 0.825217 | 5.287921e-54 | -8.615850e-47 |
Msa0182280 | Msa0513440 | 0.848196 | 7.149791e-60 | -8.615850e-47 |
Msa0182280 | Msa0524590 | 0.830055 | 3.641630e-55 | -8.615850e-47 |
Msa0182280 | Msa0525340 | 0.804036 | 2.619681e-49 | -8.615850e-47 |
Msa0182280 | Msa0527910 | 0.816831 | 4.514586e-52 | -8.615850e-47 |
Msa0182280 | Msa0534080 | 0.801078 | 1.067090e-48 | -8.615850e-47 |
Msa0182280 | Msa0536790 | 0.807547 | 4.792306e-50 | -8.615850e-47 |
Msa0182280 | Msa0550570 | 0.833143 | 6.315568e-56 | -8.615850e-47 |
Msa0182280 | Msa0554180 | -0.805389 | 1.366849e-49 | -8.615850e-47 |
Msa0182280 | Msa0556790 | 0.813401 | 2.607945e-51 | -8.615850e-47 |
Msa0182280 | Msa0560470 | 0.820294 | 7.400864e-53 | -8.615850e-47 |
Msa0182280 | Msa0565620 | -0.823795 | 1.142494e-53 | -8.615850e-47 |
Msa0182280 | Msa0580950 | 0.809037 | 2.306349e-50 | -8.615850e-47 |
Msa0182280 | Msa0581130 | 0.813740 | 2.196085e-51 | -8.615850e-47 |
Msa0182280 | Msa0586850 | 0.829359 | 5.379463e-55 | -8.615850e-47 |
Msa0182280 | Msa0590650 | 0.820823 | 5.595811e-53 | -8.615850e-47 |
Msa0182280 | Msa0590680 | 0.808215 | 3.455750e-50 | -8.615850e-47 |
Msa0182280 | Msa0600610 | 0.814480 | 1.508117e-51 | -8.615850e-47 |
Msa0182280 | Msa0602120 | 0.802608 | 5.176330e-49 | -8.615850e-47 |
Msa0182280 | Msa0607510 | 0.851185 | 1.046472e-60 | -8.615850e-47 |
Msa0182280 | Msa0609000 | 0.836125 | 1.123659e-56 | -8.615850e-47 |
Msa0182280 | Msa0609970 | 0.813705 | 2.236321e-51 | -8.615850e-47 |
Msa0182280 | Msa0610390 | 0.821955 | 3.065462e-53 | -8.615850e-47 |
Msa0182280 | Msa0614990 | 0.806387 | 8.431567e-50 | -8.615850e-47 |
Msa0182280 | Msa0615660 | 0.806224 | 9.126029e-50 | -8.615850e-47 |
Msa0182280 | Msa0618010 | 0.804116 | 2.520931e-49 | -8.615850e-47 |
Msa0182280 | Msa0618200 | -0.828927 | 6.847804e-55 | -8.615850e-47 |
Msa0182280 | Msa0618930 | 0.821401 | 4.118378e-53 | -8.615850e-47 |
Msa0182280 | Msa0619070 | 0.803290 | 3.741389e-49 | -8.615850e-47 |
Msa0182280 | Msa0619920 | 0.834503 | 2.887353e-56 | -8.615850e-47 |
Msa0182280 | Msa0625790 | 0.805609 | 1.229216e-49 | -8.615850e-47 |
Msa0182280 | Msa0626680 | 0.808741 | 2.668951e-50 | -8.615850e-47 |
Msa0182280 | Msa0626940 | 0.810761 | 9.817312e-51 | -8.615850e-47 |
Msa0182280 | Msa0639120 | 0.830211 | 3.336841e-55 | -8.615850e-47 |
Msa0182280 | Msa0643250 | 0.805063 | 1.599595e-49 | -8.615850e-47 |
Msa0182280 | Msa0646130 | 0.825083 | 5.686876e-54 | -8.615850e-47 |
Msa0182280 | Msa0647490 | 0.801497 | 8.758356e-49 | -8.615850e-47 |
Msa0182280 | Msa0650920 | 0.811808 | 5.816681e-51 | -8.615850e-47 |
Msa0182280 | Msa0652300 | 0.817506 | 3.184005e-52 | -8.615850e-47 |
Msa0182280 | Msa0657460 | -0.800472 | 1.418372e-48 | -8.615850e-47 |
Msa0182280 | Msa0659140 | 0.806222 | 9.135484e-50 | -8.615850e-47 |
Msa0182280 | Msa0659990 | 0.821872 | 3.204495e-53 | -8.615850e-47 |
Msa0182280 | Msa0664760 | 0.807194 | 5.693005e-50 | -8.615850e-47 |
Msa0182280 | Msa0664960 | 0.802377 | 5.774870e-49 | -8.615850e-47 |
Msa0182280 | Msa0669850 | 0.814513 | 1.482992e-51 | -8.615850e-47 |
Msa0182280 | Msa0670270 | 0.810963 | 8.873654e-51 | -8.615850e-47 |
Msa0182280 | Msa0687630 | 0.800755 | 1.242034e-48 | -8.615850e-47 |
Msa0182280 | Msa0692940 | 0.818830 | 1.597253e-52 | -8.615850e-47 |
Msa0182280 | Msa0693790 | 0.806829 | 6.803517e-50 | -8.615850e-47 |
Msa0182280 | Msa0694840 | 0.819089 | 1.394875e-52 | -8.615850e-47 |
Msa0182280 | Msa0704800 | 0.810953 | 8.918372e-51 | -8.615850e-47 |
Msa0182280 | Msa0705600 | 0.814000 | 1.925328e-51 | -8.615850e-47 |
Msa0182280 | Msa0706390 | 0.812083 | 5.067595e-51 | -8.615850e-47 |
Msa0182280 | Msa0707390 | 0.812466 | 4.180506e-51 | -8.615850e-47 |
Msa0182280 | Msa0711490 | 0.812506 | 4.097870e-51 | -8.615850e-47 |
Msa0182280 | Msa0712310 | 0.805816 | 1.112085e-49 | -8.615850e-47 |
Msa0182280 | Msa0719420 | 0.812989 | 3.211664e-51 | -8.615850e-47 |
Msa0182280 | Msa0726830 | 0.806783 | 6.956562e-50 | -8.615850e-47 |
Msa0182280 | Msa0726860 | 0.804801 | 1.814283e-49 | -8.615850e-47 |
Msa0182280 | Msa0733480 | 0.829231 | 5.777770e-55 | -8.615850e-47 |
Msa0182280 | Msa0735310 | 0.832155 | 1.110906e-55 | -8.615850e-47 |
Msa0182280 | Msa0752620 | 0.800528 | 1.381800e-48 | -8.615850e-47 |
Msa0182280 | Msa0756930 | 0.803874 | 2.829811e-49 | -8.615850e-47 |
Msa0182280 | Msa0772480 | 0.800516 | 1.389346e-48 | -8.615850e-47 |
Msa0182280 | Msa0774750 | 0.811827 | 5.763187e-51 | -8.615850e-47 |
Msa0182280 | Msa0781270 | 0.805728 | 1.160436e-49 | -8.615850e-47 |
Msa0182280 | Msa0789680 | 0.812008 | 5.260648e-51 | -8.615850e-47 |
Msa0182280 | Msa0793390 | 0.819639 | 1.045188e-52 | -8.615850e-47 |
Msa0182280 | Msa0795010 | 0.802554 | 5.309882e-49 | -8.615850e-47 |
Msa0182280 | Msa0795030 | 0.818416 | 1.982705e-52 | -8.615850e-47 |
Msa0182280 | Msa0798440 | 0.804106 | 2.533244e-49 | -8.615850e-47 |
Msa0182280 | Msa0798810 | -0.801242 | 9.874721e-49 | -8.615850e-47 |
Msa0182280 | Msa0802410 | 0.812008 | 5.262454e-51 | -8.615850e-47 |
Msa0182280 | Msa0805500 | 0.838919 | 2.160678e-57 | -8.615850e-47 |
Msa0182280 | Msa0814250 | 0.818173 | 2.250210e-52 | -8.615850e-47 |
Msa0182280 | Msa0814320 | 0.819736 | 9.931389e-53 | -8.615850e-47 |
Msa0182280 | Msa0814630 | -0.813087 | 3.055983e-51 | -8.615850e-47 |
Msa0182280 | Msa0817260 | 0.802559 | 5.297074e-49 | -8.615850e-47 |
Msa0182280 | Msa0819060 | 0.806973 | 6.341010e-50 | -8.615850e-47 |
Msa0182280 | Msa0821680 | 0.814202 | 1.737413e-51 | -8.615850e-47 |
Msa0182280 | Msa0824730 | 0.803193 | 3.917795e-49 | -8.615850e-47 |
Msa0182280 | Msa0826500 | 0.800508 | 1.394665e-48 | -8.615850e-47 |
Msa0182280 | Msa0830990 | 0.807646 | 4.566017e-50 | -8.615850e-47 |
Msa0182280 | Msa0839200 | 0.823905 | 1.077057e-53 | -8.615850e-47 |
Msa0182280 | Msa0847080 | 0.813222 | 2.855013e-51 | -8.615850e-47 |
Msa0182280 | Msa0849200 | 0.800449 | 1.433526e-48 | -8.615850e-47 |
Msa0182280 | Msa0852390 | 0.806854 | 6.718855e-50 | -8.615850e-47 |
Msa0182280 | Msa0852860 | 0.801910 | 7.204284e-49 | -8.615850e-47 |
Msa0182280 | Msa0869010 | 0.816063 | 6.708257e-52 | -8.615850e-47 |
Msa0182280 | Msa0871780 | 0.805667 | 1.195088e-49 | -8.615850e-47 |
Msa0182280 | Msa0871890 | 0.835136 | 2.000197e-56 | -8.615850e-47 |
Msa0182280 | Msa0879850 | 0.808514 | 2.983087e-50 | -8.615850e-47 |
Msa0182280 | Msa0895310 | 0.828945 | 6.778429e-55 | -8.615850e-47 |
Msa0182280 | Msa0901450 | 0.801025 | 1.093988e-48 | -8.615850e-47 |
Msa0182280 | Msa0905260 | 0.800761 | 1.238294e-48 | -8.615850e-47 |
Msa0182280 | Msa0905380 | 0.801752 | 7.764189e-49 | -8.615850e-47 |
Msa0182280 | Msa0924150 | -0.819736 | 9.930108e-53 | -8.615850e-47 |
Msa0182280 | Msa0925770 | 0.804542 | 2.054723e-49 | -8.615850e-47 |
Msa0182280 | Msa0933290 | 0.827171 | 1.812799e-54 | -8.615850e-47 |
Msa0182280 | Msa0940830 | 0.803122 | 4.053745e-49 | -8.615850e-47 |
Msa0182280 | Msa0947530 | -0.808156 | 3.556891e-50 | -8.615850e-47 |
Msa0182280 | Msa0960830 | 0.827339 | 1.651942e-54 | -8.615850e-47 |
Msa0182280 | Msa0966720 | -0.822603 | 2.168320e-53 | -8.615850e-47 |
Msa0182280 | Msa0967370 | 0.801119 | 1.046586e-48 | -8.615850e-47 |
Msa0182280 | Msa0974810 | 0.801295 | 9.633355e-49 | -8.615850e-47 |
Msa0182280 | Msa0976330 | 0.853856 | 1.812390e-61 | -8.615850e-47 |
Msa0182280 | Msa0981430 | 0.839140 | 1.893421e-57 | -8.615850e-47 |
Msa0182280 | Msa1001350 | 0.805363 | 1.384266e-49 | -8.615850e-47 |
Msa0182280 | Msa1002600 | -0.808789 | 2.606221e-50 | -8.615850e-47 |
Msa0182280 | Msa1003440 | 0.804932 | 1.703494e-49 | -8.615850e-47 |
Msa0182280 | Msa1019240 | 0.806356 | 8.561538e-50 | -8.615850e-47 |
Msa0182280 | Msa1025940 | 0.819685 | 1.020242e-52 | -8.615850e-47 |
Msa0182280 | Msa1029970 | 0.802791 | 4.744829e-49 | -8.615850e-47 |
Msa0182280 | Msa1030930 | 0.812872 | 3.407043e-51 | -8.615850e-47 |
Msa0182280 | Msa1040800 | 0.805711 | 1.170073e-49 | -8.615850e-47 |
Msa0182280 | Msa1040890 | 0.800941 | 1.138156e-48 | -8.615850e-47 |
Msa0182280 | Msa1069660 | -0.832004 | 1.210568e-55 | -8.615850e-47 |
Msa0182280 | Msa1070050 | 0.817279 | 3.580483e-52 | -8.615850e-47 |
Msa0182280 | Msa1073400 | 0.837549 | 4.867662e-57 | -8.615850e-47 |
Msa0182280 | Msa1077030 | 0.801155 | 1.028921e-48 | -8.615850e-47 |
Msa0182280 | Msa1080410 | -0.810759 | 9.823472e-51 | -8.615850e-47 |
Msa0182280 | Msa1083880 | 0.815437 | 9.249955e-52 | -8.615850e-47 |
Msa0182280 | Msa1084470 | 0.806120 | 9.597802e-50 | -8.615850e-47 |
Msa0182280 | Msa1089840 | 0.825858 | 3.726431e-54 | -8.615850e-47 |
Msa0182280 | Msa1093330 | 0.854023 | 1.621541e-61 | -8.615850e-47 |
Msa0182280 | Msa1094430 | 0.800720 | 1.262263e-48 | -8.615850e-47 |
Msa0182280 | Msa1096230 | 0.807489 | 4.929967e-50 | -8.615850e-47 |
Msa0182280 | Msa1113880 | 0.809558 | 1.782827e-50 | -8.615850e-47 |
Msa0182280 | Msa1120810 | 0.815945 | 7.126702e-52 | -8.615850e-47 |
Msa0182280 | Msa1122820 | 0.833610 | 4.830383e-56 | -8.615850e-47 |
Msa0182280 | Msa1126120 | -0.857910 | 1.183094e-62 | -8.615850e-47 |
Msa0182280 | Msa1126850 | 0.843294 | 1.530523e-58 | -8.615850e-47 |
Msa0182280 | Msa1130210 | -0.816298 | 5.942408e-52 | -8.615850e-47 |
Msa0182280 | Msa1143840 | 0.816681 | 4.879469e-52 | -8.615850e-47 |
Msa0182280 | Msa1152520 | 0.816007 | 6.903657e-52 | -8.615850e-47 |
Msa0182280 | Msa1160360 | 0.806571 | 7.711333e-50 | -8.615850e-47 |
Msa0182280 | Msa1165960 | 0.812760 | 3.604334e-51 | -8.615850e-47 |
Msa0182280 | Msa1166010 | 0.804597 | 2.001602e-49 | -8.615850e-47 |
Msa0182280 | Msa1166870 | 0.841060 | 5.972623e-58 | -8.615850e-47 |
Msa0182280 | Msa1179950 | 0.830808 | 2.383519e-55 | -8.615850e-47 |
Msa0182280 | Msa1179980 | 0.845864 | 3.111624e-59 | -8.615850e-47 |
Msa0182280 | Msa1192850 | 0.806792 | 6.925193e-50 | -8.615850e-47 |
Msa0182280 | Msa1193950 | -0.801705 | 7.936456e-49 | -8.615850e-47 |
Msa0182280 | Msa1201830 | 0.839775 | 1.294682e-57 | -8.615850e-47 |
Msa0182280 | Msa1202150 | 0.811109 | 8.252206e-51 | -8.615850e-47 |
Msa0182280 | Msa1202580 | 0.802285 | 6.032749e-49 | -8.615850e-47 |
Msa0182280 | Msa1211830 | 0.800158 | 1.642974e-48 | -8.615850e-47 |
Msa0182280 | Msa1223330 | 0.812558 | 3.990195e-51 | -8.615850e-47 |
Msa0182280 | Msa1226610 | 0.805942 | 1.046069e-49 | -8.615850e-47 |
Msa0182280 | Msa1227690 | 0.806215 | 9.167928e-50 | -8.615850e-47 |
Msa0182280 | Msa1237940 | 0.800086 | 1.699571e-48 | -8.615850e-47 |
Msa0182280 | Msa1246530 | -0.832346 | 9.963509e-56 | -8.615850e-47 |
Msa0182280 | Msa1253810 | 0.835198 | 1.929303e-56 | -8.615850e-47 |
Msa0182280 | Msa1254710 | 0.802471 | 5.522635e-49 | -8.615850e-47 |
Msa0182280 | Msa1265630 | 0.800260 | 1.566483e-48 | -8.615850e-47 |
Msa0182280 | Msa1267260 | 0.801576 | 8.436405e-49 | -8.615850e-47 |
Msa0182280 | Msa1269300 | 0.823704 | 1.200171e-53 | -8.615850e-47 |
Msa0182280 | Msa1270620 | 0.840309 | 9.395499e-58 | -8.615850e-47 |
Msa0182280 | Msa1270690 | 0.841027 | 6.093651e-58 | -8.615850e-47 |
Msa0182280 | Msa1280620 | 0.821197 | 4.587860e-53 | -8.615850e-47 |
Msa0182280 | Msa1294840 | 0.829053 | 6.382602e-55 | -8.615850e-47 |
Msa0182280 | Msa1294960 | 0.856797 | 2.522323e-62 | -8.615850e-47 |
Msa0182280 | Msa1295110 | 0.807187 | 5.713110e-50 | -8.615850e-47 |
Msa0182280 | Msa1295490 | -0.807264 | 5.503589e-50 | -8.615850e-47 |
Msa0182280 | Msa1306990 | 0.840148 | 1.035187e-57 | -8.615850e-47 |
Msa0182280 | Msa1310690 | 0.812900 | 3.359617e-51 | -8.615850e-47 |
Msa0182280 | Msa1323990 | 0.807891 | 4.050093e-50 | -8.615850e-47 |
Msa0182280 | Msa1327490 | 0.808287 | 3.335994e-50 | -8.615850e-47 |
Msa0182280 | Msa1331710 | 0.812623 | 3.863473e-51 | -8.615850e-47 |
Msa0182280 | Msa1345450 | 0.811880 | 5.610166e-51 | -8.615850e-47 |
Msa0182280 | Msa1347010 | 0.812455 | 4.204160e-51 | -8.615850e-47 |
Msa0182280 | Msa1350690 | 0.807053 | 6.099868e-50 | -8.615850e-47 |
Msa0182280 | Msa1355700 | 0.834808 | 2.419061e-56 | -8.615850e-47 |
Msa0182280 | Msa1358430 | 0.810737 | 9.931900e-51 | -8.615850e-47 |
Msa0182280 | Msa1359390 | 0.824435 | 8.086607e-54 | -8.615850e-47 |
Msa0182280 | Msa1363700 | 0.815571 | 8.635203e-52 | -8.615850e-47 |
Msa0182280 | Msa1365860 | 0.830372 | 3.047553e-55 | -8.615850e-47 |
Msa0182280 | Msa1366650 | 0.819577 | 1.079409e-52 | -8.615850e-47 |
Msa0182280 | Msa1371090 | 0.802148 | 6.435713e-49 | -8.615850e-47 |
Msa0182280 | Msa1372310 | 0.803235 | 3.839805e-49 | -8.615850e-47 |
Msa0182280 | Msa1382410 | 0.803036 | 4.221561e-49 | -8.615850e-47 |
Msa0182280 | Msa1383350 | 0.815002 | 1.155235e-51 | -8.615850e-47 |
Msa0182280 | Msa1397050 | 0.821239 | 4.488092e-53 | -8.615850e-47 |
Msa0182280 | Msa1397940 | 0.829572 | 4.776646e-55 | -8.615850e-47 |
Msa0182280 | Msa1408150 | 0.804760 | 1.850131e-49 | -8.615850e-47 |
Msa0182280 | Msa1412930 | -0.809709 | 1.654893e-50 | -8.615850e-47 |
Msa0182280 | Msa1426920 | 0.823956 | 1.047632e-53 | -8.615850e-47 |
Msa0182280 | Msa1438640 | 0.817607 | 3.021478e-52 | -8.615850e-47 |
Msa0182280 | Msa1442220 | -0.808982 | 2.370219e-50 | -8.615850e-47 |
Msa0182280 | Msa1444310 | 0.809389 | 1.938830e-50 | -8.615850e-47 |
Msa0182280 | Msa1450280 | 0.806786 | 6.944571e-50 | -8.615850e-47 |
Msa0182280 | Msa1452470 | 0.857658 | 1.405173e-62 | -8.615850e-47 |
Msa0182280 | Msa1452570 | 0.803749 | 3.004581e-49 | -8.615850e-47 |
Msa0182280 | Msa1465960 | 0.802107 | 6.563325e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182280 | MtrunA17_Chr1g0209081 | 95.000 | 220 | 7 | 1 | 1 | 220 | 1 | 216 | 6.83e-150 | 415 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0182280 | AT1G68185.1 | 47.085 | 223 | 107 | 6 | 1 | 220 | 1 | 215 | 1.05e-49 | 161 |
Msa0182280 | AT1G68185.3 | 47.085 | 223 | 107 | 6 | 1 | 220 | 1 | 215 | 1.05e-49 | 161 |
Msa0182280 | AT1G68185.2 | 47.085 | 223 | 107 | 6 | 1 | 220 | 47 | 261 | 7.82e-49 | 160 |
Find 70 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAGCTGAGATTGACATTT+TGG | 0.125187 | 1_4:-70689172 | Msa0182280:three_prime_UTR |
ACCCTCATGTTATACAAATT+TGG | 0.150209 | 1_4:+70688779 | None:intergenic |
AATAATTAATGATTATATTT+TGG | 0.153894 | 1_4:+70688881 | None:intergenic |
GTATAACATGAGGGTTATTT+AGG | 0.223417 | 1_4:-70688771 | Msa0182280:three_prime_UTR |
CCTCCTCATCAGTCTTCTTA+TGG | 0.228908 | 1_4:+70691131 | None:intergenic |
GAATTCTTCTTTCTCTTCTT+AGG | 0.234591 | 1_4:+70691364 | None:intergenic |
ACCATCGAGGCACACGATAT+TGG | 0.263756 | 1_4:+70691528 | None:intergenic |
AAAGCAGATTCGGATGTTTA+TGG | 0.264643 | 1_4:-70690445 | Msa0182280:intron |
ATGTGAAGTCAAGTTGATTT+AGG | 0.273644 | 1_4:-70690027 | Msa0182280:intron |
CAAATTGTGTTGTCATTTGA+TGG | 0.307014 | 1_4:-70690118 | Msa0182280:CDS |
GCAGCTGTTGGCCCTCTCTA+AGG | 0.327070 | 1_4:-70688845 | Msa0182280:three_prime_UTR |
TATCATTATCTTCCATTTCA+AGG | 0.332434 | 1_4:+70690062 | None:intergenic |
ATGATGTTGTGCATTATGTT+TGG | 0.333046 | 1_4:-70688956 | Msa0182280:three_prime_UTR |
CAAAATCCAGACAGCGATAA+TGG | 0.337536 | 1_4:-70691689 | Msa0182280:exon |
AAAATATGTACTGTACAATT+AGG | 0.339197 | 1_4:+70689064 | None:intergenic |
CACGGAAGGTTGCAATGAAT+TGG | 0.349044 | 1_4:+70690545 | None:intergenic |
TGCACAACATCATCAATAGA+AGG | 0.365604 | 1_4:+70688966 | None:intergenic |
CCATCGAGGCACACGATATT+GGG | 0.373094 | 1_4:+70691529 | None:intergenic |
AGTCTTCTTATGGGCCTTAC+CGG | 0.377421 | 1_4:+70691141 | None:intergenic |
GTAGAAGTTCTTTCGGTGTA+TGG | 0.379855 | 1_4:-70689014 | Msa0182280:three_prime_UTR |
CTCCTCATCAGTCTTCTTAT+GGG | 0.387413 | 1_4:+70691132 | None:intergenic |
AAACAAGGGTTCAAGTTCTT+CGG | 0.392297 | 1_4:+70691570 | None:intergenic |
AACCCCTGCCAGCCTTGAAA+TGG | 0.394451 | 1_4:-70690074 | Msa0182280:CDS |
TGATGTTGTGCATTATGTTT+GGG | 0.409527 | 1_4:-70688955 | Msa0182280:three_prime_UTR |
ATTCAACTTTGAAGAATTTG+AGG | 0.439470 | 1_4:-70691108 | Msa0182280:intron |
CCCAATATCGTGTGCCTCGA+TGG | 0.441844 | 1_4:-70691529 | Msa0182280:intron |
AGGGTTATTTAGGATACAAA+TGG | 0.446647 | 1_4:-70688761 | Msa0182280:three_prime_UTR |
TTTGGGGTTTAGGTTGAGAA+TGG | 0.451301 | 1_4:-70691241 | Msa0182280:intron |
CTGATGCAGATCTTCGATCA+TGG | 0.453261 | 1_4:-70689192 | Msa0182280:intron |
TCTTCCATTTCAAGGCTGGC+AGG | 0.456162 | 1_4:+70690070 | None:intergenic |
AGGATGAAACAAAGCAGATT+CGG | 0.459454 | 1_4:-70690455 | Msa0182280:CDS |
TTCCATTTCAAGGCTGGCAG+GGG | 0.465493 | 1_4:+70690072 | None:intergenic |
GCCTTACCGGTGACCCTTGG+TGG | 0.466237 | 1_4:+70691154 | None:intergenic |
TGGGCCTTACCGGTGACCCT+TGG | 0.476360 | 1_4:+70691151 | None:intergenic |
CAATTCATTGCAACCTTCCG+TGG | 0.476932 | 1_4:-70690544 | Msa0182280:CDS |
CCACAACAGCTGCCGTGAAA+AGG | 0.484191 | 1_4:+70688816 | None:intergenic |
ATTATCTTCCATTTCAAGGC+TGG | 0.485099 | 1_4:+70690066 | None:intergenic |
GCCACCAAGGGTCACCGGTA+AGG | 0.490738 | 1_4:-70691155 | Msa0182280:CDS |
CTTCCATTTCAAGGCTGGCA+GGG | 0.494291 | 1_4:+70690071 | None:intergenic |
TTATTTATGCTAGCAGCTGT+TGG | 0.504433 | 1_4:-70688857 | Msa0182280:three_prime_UTR |
TTGGGGTTTAGGTTGAGAAT+GGG | 0.505216 | 1_4:-70691240 | Msa0182280:intron |
GTTCTTTCGGTGTATGGCAT+AGG | 0.505606 | 1_4:-70689008 | Msa0182280:three_prime_UTR |
AGAATCTTTGCTCGTTCAGA+AGG | 0.520871 | 1_4:+70690495 | None:intergenic |
TCACCGCCATTATCGCTGTC+TGG | 0.521152 | 1_4:+70691683 | None:intergenic |
TTTGTATAGATTGAAGAAGC+AGG | 0.529052 | 1_4:-70690640 | Msa0182280:intron |
TCACTTACGTCGTCCACGGA+AGG | 0.541348 | 1_4:+70690531 | None:intergenic |
CCGGTGACCCTTGGTGGCGA+AGG | 0.548861 | 1_4:+70691160 | None:intergenic |
TGTAGGATGACCAGTTTGAA+AGG | 0.550107 | 1_4:-70690183 | Msa0182280:intron |
AACCAAATTTGTATAACATG+AGG | 0.554290 | 1_4:-70688781 | Msa0182280:three_prime_UTR |
CCTTCGCCACCAAGGGTCAC+CGG | 0.569098 | 1_4:-70691160 | Msa0182280:CDS |
TGAGAATGGGAAGAATACTA+AGG | 0.569816 | 1_4:-70691227 | Msa0182280:CDS |
ACCAAATTTGTATAACATGA+GGG | 0.577504 | 1_4:-70688780 | Msa0182280:three_prime_UTR |
TTGGTTACCTTCGCCACCAA+GGG | 0.579619 | 1_4:-70691167 | Msa0182280:CDS |
GCACAACATCATCAATAGAA+GGG | 0.585781 | 1_4:+70688967 | None:intergenic |
AACGCGACTGTAATCAAACA+AGG | 0.602179 | 1_4:+70691555 | None:intergenic |
AAAAGGTTACAGCCTTAGAG+AGG | 0.611672 | 1_4:+70688833 | None:intergenic |
GAATGGGAAGAATACTAAGG+TGG | 0.613980 | 1_4:-70691224 | Msa0182280:CDS |
TGGACCTCGAGGATGATGAT+TGG | 0.623297 | 1_4:-70691186 | Msa0182280:CDS |
TCTCATCTCTGTTCAAGACA+AGG | 0.626807 | 1_4:-70690475 | Msa0182280:CDS |
CCATAAGAAGACTGATGAGG+AGG | 0.627181 | 1_4:-70691131 | Msa0182280:CDS |
ATTGGTTACCTTCGCCACCA+AGG | 0.629138 | 1_4:-70691168 | Msa0182280:CDS |
AAAGGTTACAGCCTTAGAGA+GGG | 0.685304 | 1_4:+70688834 | None:intergenic |
TAAGGTGGAAACAGTGAATG+TGG | 0.687527 | 1_4:-70691209 | Msa0182280:CDS |
GGCCCATAAGAAGACTGATG+AGG | 0.692280 | 1_4:-70691134 | Msa0182280:CDS |
AGTGAATGTGGTGGACCTCG+AGG | 0.707436 | 1_4:-70691197 | Msa0182280:CDS |
GGTGGAAACAGTGAATGTGG+TGG | 0.711849 | 1_4:-70691206 | Msa0182280:CDS |
AATCCAGACAGCGATAATGG+CGG | 0.717060 | 1_4:-70691686 | Msa0182280:intron |
TTAAGGAGTGCTAACCATCG+AGG | 0.734889 | 1_4:+70691515 | None:intergenic |
ACGCGACTGTAATCAAACAA+GGG | 0.742183 | 1_4:+70691556 | None:intergenic |
GTAACCAATCATCATCCTCG+AGG | 0.759157 | 1_4:+70691182 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATTTCAATTTGAATAAT+CGG | + | chr1_4:70689070-70689089 | None:intergenic | 10.0% |
!! | AAACAAAAAATTAAACATTT+GGG | + | chr1_4:70689097-70689116 | None:intergenic | 10.0% |
!! | AAAACAAAAAATTAAACATT+TGG | + | chr1_4:70689098-70689117 | None:intergenic | 10.0% |
!! | AAAACAAAAAAAAACAAATT+TGG | + | chr1_4:70689247-70689266 | None:intergenic | 10.0% |
!! | TACTCAATTTCAAATAATTA+GGG | - | chr1_4:70688902-70688921 | Msa0182280:three_prime_UTR | 15.0% |
!! | AACAAAAAATTAAACATTTG+GGG | + | chr1_4:70689096-70689115 | None:intergenic | 15.0% |
!!! | TGTAAATTTTGATAATGTTT+TGG | - | chr1_4:70689295-70689314 | Msa0182280:intron | 15.0% |
!!! | GTAAATTTTGATAATGTTTT+GGG | - | chr1_4:70689296-70689315 | Msa0182280:intron | 15.0% |
!!! | TAAATTTTGATAATGTTTTG+GGG | - | chr1_4:70689297-70689316 | Msa0182280:intron | 15.0% |
!! | CTGATAAAGAAAATAAAAAA+AGG | + | chr1_4:70690268-70690287 | None:intergenic | 15.0% |
!!! | ATTTTAAAGTAAGAAAACTA+AGG | - | chr1_4:70690720-70690739 | Msa0182280:intron | 15.0% |
!! | AAATTGAAAATATTATCTTC+TGG | + | chr1_4:70690827-70690846 | None:intergenic | 15.0% |
!!! | ATTTTCAATTTTTTCAACAA+TGG | - | chr1_4:70690836-70690855 | Msa0182280:intron | 15.0% |
!!! | CGCTTTTTTTTTTTTTTTGA+AGG | + | chr1_4:70688792-70688811 | None:intergenic | 20.0% |
!! | GTACTCAATTTCAAATAATT+AGG | - | chr1_4:70688901-70688920 | Msa0182280:three_prime_UTR | 20.0% |
!! | ACAAAAAATTAAACATTTGG+GGG | + | chr1_4:70689095-70689114 | None:intergenic | 20.0% |
!!! | GTTTTTTTTTGTTTTGTACA+AGG | - | chr1_4:70689252-70689271 | Msa0182280:intron | 20.0% |
!! | AATGGCAAAAAACAAAAATT+TGG | + | chr1_4:70689509-70689528 | None:intergenic | 20.0% |
!! | TTAAAATAACATGCTCATAA+AGG | - | chr1_4:70689689-70689708 | Msa0182280:intron | 20.0% |
!! | TAAAATAACATGCTCATAAA+GGG | - | chr1_4:70689690-70689709 | Msa0182280:intron | 20.0% |
!!! | TTGTATAAAAAAAGTGTGTT+GGG | - | chr1_4:70689738-70689757 | Msa0182280:intron | 20.0% |
!! | ATGAGTAGAATAACTTATAT+TGG | + | chr1_4:70689823-70689842 | None:intergenic | 20.0% |
!! | TAAAGAAAATAAAAAAAGGC+AGG | + | chr1_4:70690264-70690283 | None:intergenic | 20.0% |
!!! | ATTTTGTTTATAATAGTGAC+CGG | + | chr1_4:70690993-70691012 | None:intergenic | 20.0% |
!!! | ATTTTGCTTATAATAGTTAC+CGG | - | chr1_4:70691102-70691121 | Msa0182280:intron | 20.0% |
!!! | GCTTTTTTATCAATTTTTAC+TGG | - | chr1_4:70691433-70691452 | Msa0182280:intron | 20.0% |
!! | AAAATATGTACTGTACAATT+AGG | + | chr1_4:70691493-70691512 | None:intergenic | 20.0% |
!! | AATTTTACAGCATAGAAAAG+AGG | - | chr1_4:70688744-70688763 | Msa0182280:three_prime_UTR | 25.0% |
!! | ATTTTACAGCATAGAAAAGA+GGG | - | chr1_4:70688745-70688764 | Msa0182280:three_prime_UTR | 25.0% |
!!! | AAGCGAATTAAATTTTGAAG+CGG | - | chr1_4:70688807-70688826 | Msa0182280:three_prime_UTR | 25.0% |
!! | TGAAGATTTGAAATTGAAAG+AGG | + | chr1_4:70688930-70688949 | None:intergenic | 25.0% |
! | TTGAATAATCGGAATAGTTA+AGG | + | chr1_4:70689059-70689078 | None:intergenic | 25.0% |
!! | ATTCAACTTTGAAGAATTTG+AGG | - | chr1_4:70689446-70689465 | Msa0182280:intron | 25.0% |
! | TAAGTAAACAAACAATGCAA+TGG | + | chr1_4:70689527-70689546 | None:intergenic | 25.0% |
!!! | TGTAGCAATGTTTTAAAAAC+CGG | + | chr1_4:70689655-70689674 | None:intergenic | 25.0% |
!! | CTTGTATAAAAAAAGTGTGT+TGG | - | chr1_4:70689737-70689756 | Msa0182280:intron | 25.0% |
! | TAACTAATTAAGCCTATTCT+TGG | - | chr1_4:70689785-70689804 | Msa0182280:intron | 25.0% |
! | ACATCTTATAAGAAACTGTA+TGG | + | chr1_4:70689888-70689907 | None:intergenic | 25.0% |
! | TGTTGATGTTCTTAATATTG+TGG | - | chr1_4:70690163-70690182 | Msa0182280:CDS | 25.0% |
!!! | TAGTTGTAGTTTGTTTGAAA+TGG | - | chr1_4:70690214-70690233 | Msa0182280:intron | 25.0% |
!! | AGTTTGTTTGAAATGGTATA+AGG | - | chr1_4:70690221-70690240 | Msa0182280:intron | 25.0% |
!! | GTTTGTTTGAAATGGTATAA+GGG | - | chr1_4:70690222-70690241 | Msa0182280:intron | 25.0% |
!!! | TTTTGATAATCCTTTCAAAC+TGG | + | chr1_4:70690384-70690403 | None:intergenic | 25.0% |
! | TATCATTATCTTCCATTTCA+AGG | + | chr1_4:70690495-70690514 | None:intergenic | 25.0% |
! | TTGAATACAAATTCATCATC+AGG | + | chr1_4:70690664-70690683 | None:intergenic | 25.0% |
! | TGAATTTGTATTCAAGTGTA+TGG | - | chr1_4:70690669-70690688 | Msa0182280:intron | 25.0% |
! | AATGATGAATGCTCATATTT+AGG | - | chr1_4:70690882-70690901 | Msa0182280:intron | 25.0% |
! | ATGATGAATGCTCATATTTA+GGG | - | chr1_4:70690883-70690902 | Msa0182280:intron | 25.0% |
! | TGTGGTAAATATCATTTGTA+AGG | - | chr1_4:70690906-70690925 | Msa0182280:intron | 25.0% |
!!! | GTCTTCTATATTTTAAGAAC+TGG | + | chr1_4:70691471-70691490 | None:intergenic | 25.0% |
!!! | TTGTACAGTACATATTTTGA+CGG | - | chr1_4:70691495-70691514 | Msa0182280:intron | 25.0% |
!!! | TTTTTAGGTAGAAGTTCTTT+CGG | - | chr1_4:70691533-70691552 | Msa0182280:CDS | 25.0% |
!! | AACTCTATAGAATTTTGTCA+AGG | - | chr1_4:70691631-70691650 | Msa0182280:intron | 25.0% |
! | AACCAAATTTGTATAACATG+AGG | - | chr1_4:70691773-70691792 | Msa0182280:five_prime_UTR | 25.0% |
! | ACCAAATTTGTATAACATGA+GGG | - | chr1_4:70691774-70691793 | Msa0182280:five_prime_UTR | 25.0% |
! | TTTTACAGCATAGAAAAGAG+GGG | - | chr1_4:70688746-70688765 | Msa0182280:three_prime_UTR | 30.0% |
!!! | AGCGAATTAAATTTTGAAGC+GGG | - | chr1_4:70688808-70688827 | Msa0182280:three_prime_UTR | 30.0% |
GAATTCTTCTTTCTCTTCTT+AGG | + | chr1_4:70689193-70689212 | None:intergenic | 30.0% | |
! | TCAACATGTAGTGAGTATTT+TGG | - | chr1_4:70689219-70689238 | Msa0182280:intron | 30.0% |
!! | TTGTTTTGTACAAGGATGTT+TGG | - | chr1_4:70689260-70689279 | Msa0182280:intron | 30.0% |
!!! | TTGATAATGTTTTGGGGTTT+AGG | - | chr1_4:70689303-70689322 | Msa0182280:intron | 30.0% |
! | AACTTTGAAGAATTTGAGGT+TGG | - | chr1_4:70689450-70689469 | Msa0182280:intron | 30.0% |
TTTGTTTACTTAACACTCCT+AGG | - | chr1_4:70689535-70689554 | Msa0182280:intron | 30.0% | |
!! | TTTTCCGATTCGTTTGATTT+CGG | + | chr1_4:70689626-70689645 | None:intergenic | 30.0% |
!!! | GTAGCAATGTTTTAAAAACC+GGG | + | chr1_4:70689654-70689673 | None:intergenic | 30.0% |
AATTAAGCCTATTCTTGGTT+TGG | - | chr1_4:70689790-70689809 | Msa0182280:intron | 30.0% | |
TAAAGTTCCAAACCAAGAAT+AGG | + | chr1_4:70689800-70689819 | None:intergenic | 30.0% | |
TTTGTATAGATTGAAGAAGC+AGG | - | chr1_4:70689914-70689933 | Msa0182280:intron | 30.0% | |
!! | TATTTGTCACTTTATCTAGC+TGG | - | chr1_4:70690321-70690340 | Msa0182280:intron | 30.0% |
ATCCTACAGAGAATTGAAAA+AGG | + | chr1_4:70690359-70690378 | None:intergenic | 30.0% | |
! | CAAATTGTGTTGTCATTTGA+TGG | - | chr1_4:70690436-70690455 | Msa0182280:intron | 30.0% |
!! | ATGTGAAGTCAAGTTGATTT+AGG | - | chr1_4:70690527-70690546 | Msa0182280:CDS | 30.0% |
!! | AGATCCACTTCTATTTCTAA+TGG | + | chr1_4:70690773-70690792 | None:intergenic | 30.0% |
GGTAAATATCATTTGTAAGG+AGG | - | chr1_4:70690909-70690928 | Msa0182280:intron | 30.0% | |
!! | TAGGCATTGTTATGTGATTT+TGG | - | chr1_4:70691139-70691158 | Msa0182280:CDS | 30.0% |
AGAACAATGCAATAATGCAA+AGG | + | chr1_4:70691178-70691197 | None:intergenic | 30.0% | |
! | TGCATTGTTCTTTTTGTCAT+TGG | - | chr1_4:70691187-70691206 | Msa0182280:CDS | 30.0% |
! | CAATTGATTATGCTGTTTGT+TGG | - | chr1_4:70691274-70691293 | Msa0182280:intron | 30.0% |
ATGATGTTGTGCATTATGTT+TGG | - | chr1_4:70691598-70691617 | Msa0182280:intron | 30.0% | |
TGATGTTGTGCATTATGTTT+GGG | - | chr1_4:70691599-70691618 | Msa0182280:intron | 30.0% | |
ACCCTCATGTTATACAAATT+TGG | + | chr1_4:70691778-70691797 | None:intergenic | 30.0% | |
GTATAACATGAGGGTTATTT+AGG | - | chr1_4:70691783-70691802 | Msa0182280:five_prime_UTR | 30.0% | |
! | AGGGTTATTTAGGATACAAA+TGG | - | chr1_4:70691793-70691812 | Msa0182280:five_prime_UTR | 30.0% |
! | AAACAAGGGTTCAAGTTCTT+CGG | + | chr1_4:70688987-70689006 | None:intergenic | 35.0% |
TGAGAATGGGAAGAATACTA+AGG | - | chr1_4:70689327-70689346 | Msa0182280:intron | 35.0% | |
!! | CGGTTTAACTTGTTAAACCT+AGG | + | chr1_4:70689555-70689574 | None:intergenic | 35.0% |
ACAATGTAGTCTGATTGAAC+TGG | + | chr1_4:70689601-70689620 | None:intergenic | 35.0% | |
GTAACCGAAATCAAACGAAT+CGG | - | chr1_4:70689619-70689638 | Msa0182280:intron | 35.0% | |
!!! | TTTTGCTGATTCAGCAAAAG+CGG | + | chr1_4:70689946-70689965 | None:intergenic | 35.0% |
AGGATGAAACAAAGCAGATT+CGG | - | chr1_4:70690099-70690118 | Msa0182280:CDS | 35.0% | |
AAAGCAGATTCGGATGTTTA+TGG | - | chr1_4:70690109-70690128 | Msa0182280:CDS | 35.0% | |
!!! | GGTTGTTTTTATTAGTGCTC+TGG | - | chr1_4:70690184-70690203 | Msa0182280:intron | 35.0% |
TATCAGAGCTGCATTTCTTT+AGG | - | chr1_4:70690282-70690301 | Msa0182280:intron | 35.0% | |
!!! | CTCCTTTTTCAATTCTCTGT+AGG | - | chr1_4:70690354-70690373 | Msa0182280:intron | 35.0% |
ATTATCTTCCATTTCAAGGC+TGG | + | chr1_4:70690491-70690510 | None:intergenic | 35.0% | |
ATTCAAGTGTATGGAAAGAG+AGG | - | chr1_4:70690678-70690697 | Msa0182280:intron | 35.0% | |
AGCACCATTAGAAATAGAAG+TGG | - | chr1_4:70690766-70690785 | Msa0182280:intron | 35.0% | |
ACATGTTTATTCTTAGCCTC+AGG | - | chr1_4:70690942-70690961 | Msa0182280:intron | 35.0% | |
GAATTATTCATTACTCCCTC+CGG | - | chr1_4:70690971-70690990 | Msa0182280:intron | 35.0% | |
TGTTTATAATAGTGACCGGA+GGG | + | chr1_4:70690989-70691008 | None:intergenic | 35.0% | |
TTGTTTATAATAGTGACCGG+AGG | + | chr1_4:70690990-70691009 | None:intergenic | 35.0% | |
TTGCTTATAATAGTTACCGG+AGG | - | chr1_4:70691105-70691124 | Msa0182280:intron | 35.0% | |
TGCTTATAATAGTTACCGGA+GGG | - | chr1_4:70691106-70691125 | Msa0182280:intron | 35.0% | |
! | GCATTGTTATGTGATTTTGG+AGG | - | chr1_4:70691142-70691161 | Msa0182280:CDS | 35.0% |
! | ACTAACATGTGCTGCAATTT+TGG | - | chr1_4:70691299-70691318 | Msa0182280:intron | 35.0% |
!!! | CATATTTTGACGGAATGTCT+TGG | - | chr1_4:70691505-70691524 | Msa0182280:intron | 35.0% |
!! | AATGTCTTGGAGCACTTTTT+AGG | - | chr1_4:70691518-70691537 | Msa0182280:intron | 35.0% |
GCACAACATCATCAATAGAA+GGG | + | chr1_4:70691590-70691609 | None:intergenic | 35.0% | |
TGCACAACATCATCAATAGA+AGG | + | chr1_4:70691591-70691610 | None:intergenic | 35.0% | |
TTATTTATGCTAGCAGCTGT+TGG | - | chr1_4:70691697-70691716 | Msa0182280:five_prime_UTR | 35.0% | |
!!! | CGCTGTCTGGATTTTGATTA+AGG | + | chr1_4:70688861-70688880 | None:intergenic | 40.0% |
CAAAATCCAGACAGCGATAA+TGG | - | chr1_4:70688865-70688884 | Msa0182280:three_prime_UTR | 40.0% | |
! | TGTGTGTTTTTCCCATTTGC+AGG | - | chr1_4:70688955-70688974 | Msa0182280:three_prime_UTR | 40.0% |
TTCGGTTTCATCCTGCAAAT+GGG | + | chr1_4:70688969-70688988 | None:intergenic | 40.0% | |
ACGCGACTGTAATCAAACAA+GGG | + | chr1_4:70689001-70689020 | None:intergenic | 40.0% | |
AACGCGACTGTAATCAAACA+AGG | + | chr1_4:70689002-70689021 | None:intergenic | 40.0% | |
!! | TTTGGGGTTTAGGTTGAGAA+TGG | - | chr1_4:70689313-70689332 | Msa0182280:intron | 40.0% |
!! | TTGGGGTTTAGGTTGAGAAT+GGG | - | chr1_4:70689314-70689333 | Msa0182280:intron | 40.0% |
GAATGGGAAGAATACTAAGG+TGG | - | chr1_4:70689330-70689349 | Msa0182280:intron | 40.0% | |
TAAGGTGGAAACAGTGAATG+TGG | - | chr1_4:70689345-70689364 | Msa0182280:intron | 40.0% | |
CTCCTCATCAGTCTTCTTAT+GGG | + | chr1_4:70689425-70689444 | None:intergenic | 40.0% | |
GAGTTGAATCAGTTGAATCG+CGG | + | chr1_4:70689579-70689598 | None:intergenic | 40.0% | |
! | TTTTTCACTTACGTCGTCCA+CGG | + | chr1_4:70690030-70690049 | None:intergenic | 40.0% |
AGAATCTTTGCTCGTTCAGA+AGG | + | chr1_4:70690062-70690081 | None:intergenic | 40.0% | |
TCTCATCTCTGTTCAAGACA+AGG | - | chr1_4:70690079-70690098 | Msa0182280:CDS | 40.0% | |
TGTAGGATGACCAGTTTGAA+AGG | - | chr1_4:70690371-70690390 | Msa0182280:intron | 40.0% | |
TATGGAAAGAGAGGATGACA+GGG | - | chr1_4:70690687-70690706 | Msa0182280:intron | 40.0% | |
TAAGGACCTTTCTTTCTCTG+AGG | - | chr1_4:70690738-70690757 | Msa0182280:intron | 40.0% | |
TTACTGCCTCAGAGAAAGAA+AGG | + | chr1_4:70690747-70690766 | None:intergenic | 40.0% | |
! | GAATGCTCATATTTAGGGTG+TGG | - | chr1_4:70690888-70690907 | Msa0182280:intron | 40.0% |
TTATTCTTAGCCTCAGGTAG+AGG | - | chr1_4:70690948-70690967 | Msa0182280:intron | 40.0% | |
TATTCTTAGCCTCAGGTAGA+GGG | - | chr1_4:70690949-70690968 | Msa0182280:intron | 40.0% | |
TGAATAATTCCCTCTACCTG+AGG | + | chr1_4:70690961-70690980 | None:intergenic | 40.0% | |
!! | CAGTTCAGAAGTGTCATTTG+TGG | - | chr1_4:70691220-70691239 | Msa0182280:CDS | 40.0% |
AAATGCTACTAGAGCAGAAG+AGG | + | chr1_4:70691246-70691265 | None:intergenic | 40.0% | |
ATCGAAGATCTGCATCAGAA+AGG | + | chr1_4:70691360-70691379 | None:intergenic | 40.0% | |
! | TGGAGCTGAGATTGACATTT+TGG | - | chr1_4:70691382-70691401 | Msa0182280:CDS | 40.0% |
! | GGAGCTGAGATTGACATTTT+GGG | - | chr1_4:70691383-70691402 | Msa0182280:CDS | 40.0% |
! | GAGCTGAGATTGACATTTTG+GGG | - | chr1_4:70691384-70691403 | Msa0182280:CDS | 40.0% |
!! | ACATTTTGGGGACTCGTTTT+TGG | - | chr1_4:70691396-70691415 | Msa0182280:CDS | 40.0% |
! | GTAGAAGTTCTTTCGGTGTA+TGG | - | chr1_4:70691540-70691559 | Msa0182280:CDS | 40.0% |
AAAGGTTACAGCCTTAGAGA+GGG | + | chr1_4:70691723-70691742 | None:intergenic | 40.0% | |
AAAAGGTTACAGCCTTAGAG+AGG | + | chr1_4:70691724-70691743 | None:intergenic | 40.0% | |
! | CTAAGGCTGTAACCTTTTCA+CGG | - | chr1_4:70691726-70691745 | Msa0182280:five_prime_UTR | 40.0% |
! | AATCCAGACAGCGATAATGG+CGG | - | chr1_4:70688868-70688887 | Msa0182280:three_prime_UTR | 45.0% |
CTTCGGTTTCATCCTGCAAA+TGG | + | chr1_4:70688970-70688989 | None:intergenic | 45.0% | |
!! | TTAAGGAGTGCTAACCATCG+AGG | + | chr1_4:70689042-70689061 | None:intergenic | 45.0% |
GTAACCAATCATCATCCTCG+AGG | + | chr1_4:70689375-70689394 | None:intergenic | 45.0% | |
AGTCTTCTTATGGGCCTTAC+CGG | + | chr1_4:70689416-70689435 | None:intergenic | 45.0% | |
CCTCCTCATCAGTCTTCTTA+TGG | + | chr1_4:70689426-70689445 | None:intergenic | 45.0% | |
CCATAAGAAGACTGATGAGG+AGG | - | chr1_4:70689423-70689442 | Msa0182280:intron | 45.0% | |
TGAATCAGTTGAATCGCGGT+CGG | + | chr1_4:70689575-70689594 | None:intergenic | 45.0% | |
ACGAATCGGAAAACTGAACC+CGG | - | chr1_4:70689633-70689652 | Msa0182280:intron | 45.0% | |
CACGGAAGGTTGCAATGAAT+TGG | + | chr1_4:70690012-70690031 | None:intergenic | 45.0% | |
CAATTCATTGCAACCTTCCG+TGG | - | chr1_4:70690010-70690029 | Msa0182280:intron | 45.0% | |
GTATGGAAAGAGAGGATGAC+AGG | - | chr1_4:70690686-70690705 | Msa0182280:intron | 45.0% | |
AACAATGGTGAAGTGCAACG+AGG | - | chr1_4:70690851-70690870 | Msa0182280:intron | 45.0% | |
!! | ACCGGAGGGAGTATTTGATT+AGG | - | chr1_4:70691120-70691139 | Msa0182280:CDS | 45.0% |
GCCTAATCAAATACTCCCTC+CGG | + | chr1_4:70691124-70691143 | None:intergenic | 45.0% | |
CTGATGCAGATCTTCGATCA+TGG | - | chr1_4:70691362-70691381 | Msa0182280:CDS | 45.0% | |
! | GTTCTTTCGGTGTATGGCAT+AGG | - | chr1_4:70691546-70691565 | Msa0182280:CDS | 45.0% |
!!! | TATTTTAGAATAAAAATAAA+AGG | + | chr1_4:70689121-70689140 | None:intergenic | 5.0% |
!!! | AATAATTAATGATTATATTT+TGG | + | chr1_4:70691676-70691695 | None:intergenic | 5.0% |
CCATCGAGGCACACGATATT+GGG | + | chr1_4:70689028-70689047 | None:intergenic | 50.0% | |
ACCATCGAGGCACACGATAT+TGG | + | chr1_4:70689029-70689048 | None:intergenic | 50.0% | |
GGTGGAAACAGTGAATGTGG+TGG | - | chr1_4:70689348-70689367 | Msa0182280:intron | 50.0% | |
TGGACCTCGAGGATGATGAT+TGG | - | chr1_4:70689368-70689387 | Msa0182280:intron | 50.0% | |
ATTGGTTACCTTCGCCACCA+AGG | - | chr1_4:70689386-70689405 | Msa0182280:intron | 50.0% | |
TTGGTTACCTTCGCCACCAA+GGG | - | chr1_4:70689387-70689406 | Msa0182280:intron | 50.0% | |
GGCCCATAAGAAGACTGATG+AGG | - | chr1_4:70689420-70689439 | Msa0182280:intron | 50.0% | |
AGGCAGGCAGATCAGAAACA+TGG | + | chr1_4:70690248-70690267 | None:intergenic | 50.0% | |
TTCCATTTCAAGGCTGGCAG+GGG | + | chr1_4:70690485-70690504 | None:intergenic | 50.0% | |
CTTCCATTTCAAGGCTGGCA+GGG | + | chr1_4:70690486-70690505 | None:intergenic | 50.0% | |
TCTTCCATTTCAAGGCTGGC+AGG | + | chr1_4:70690487-70690506 | None:intergenic | 50.0% | |
GAAAGAGAGGATGACAGGGT+GGG | - | chr1_4:70690691-70690710 | Msa0182280:intron | 50.0% | |
AAAGAGAGGATGACAGGGTG+GGG | - | chr1_4:70690692-70690711 | Msa0182280:intron | 50.0% | |
TCACCGCCATTATCGCTGTC+TGG | + | chr1_4:70688874-70688893 | None:intergenic | 55.0% | |
CCCAATATCGTGTGCCTCGA+TGG | - | chr1_4:70689025-70689044 | Msa0182280:three_prime_UTR | 55.0% | |
!! | AGTGAATGTGGTGGACCTCG+AGG | - | chr1_4:70689357-70689376 | Msa0182280:intron | 55.0% |
TCACTTACGTCGTCCACGGA+AGG | + | chr1_4:70690026-70690045 | None:intergenic | 55.0% | |
AACCCCTGCCAGCCTTGAAA+TGG | - | chr1_4:70690480-70690499 | Msa0182280:CDS | 55.0% | |
GGAAAGAGAGGATGACAGGG+TGG | - | chr1_4:70690690-70690709 | Msa0182280:intron | 55.0% | |
AAGAGAGGATGACAGGGTGG+GGG | - | chr1_4:70690693-70690712 | Msa0182280:intron | 55.0% | |
CCACAACAGCTGCCGTGAAA+AGG | + | chr1_4:70691741-70691760 | None:intergenic | 55.0% | |
! | CCTTTTCACGGCAGCTGTTG+TGG | - | chr1_4:70691738-70691757 | Msa0182280:five_prime_UTR | 55.0% |
GCAGCTGTTGGCCCTCTCTA+AGG | - | chr1_4:70691709-70691728 | Msa0182280:five_prime_UTR | 60.0% | |
CCTTCGCCACCAAGGGTCAC+CGG | - | chr1_4:70689394-70689413 | Msa0182280:intron | 65.0% | |
GCCACCAAGGGTCACCGGTA+AGG | - | chr1_4:70689399-70689418 | Msa0182280:intron | 65.0% | |
GCCTTACCGGTGACCCTTGG+TGG | + | chr1_4:70689403-70689422 | None:intergenic | 65.0% | |
TGGGCCTTACCGGTGACCCT+TGG | + | chr1_4:70689406-70689425 | None:intergenic | 65.0% | |
AGAGGATGACAGGGTGGGGG+TGG | - | chr1_4:70690696-70690715 | Msa0182280:intron | 65.0% | |
!! | CCGGTGACCCTTGGTGGCGA+AGG | + | chr1_4:70689397-70689416 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 70688740 | 70691836 | 70688740 | ID=Msa0182280;Name=Msa0182280 |
chr1_4 | mRNA | 70688740 | 70691836 | 70688740 | ID=Msa0182280-mRNA-1;Parent=Msa0182280;Name=Msa0182280-mRNA-1;_AED=0.07;_eAED=0.07;_QI=144|1|1|1|0.83|0.71|7|471|220 |
chr1_4 | exon | 70688740 | 70689205 | 70688740 | ID=Msa0182280-mRNA-1:exon:23671;Parent=Msa0182280-mRNA-1 |
chr1_4 | exon | 70690028 | 70690200 | 70690028 | ID=Msa0182280-mRNA-1:exon:23670;Parent=Msa0182280-mRNA-1 |
chr1_4 | exon | 70690446 | 70690653 | 70690446 | ID=Msa0182280-mRNA-1:exon:23669;Parent=Msa0182280-mRNA-1 |
chr1_4 | exon | 70691109 | 70691251 | 70691109 | ID=Msa0182280-mRNA-1:exon:23668;Parent=Msa0182280-mRNA-1 |
chr1_4 | exon | 70691348 | 70691415 | 70691348 | ID=Msa0182280-mRNA-1:exon:23667;Parent=Msa0182280-mRNA-1 |
chr1_4 | exon | 70691530 | 70691599 | 70691530 | ID=Msa0182280-mRNA-1:exon:23666;Parent=Msa0182280-mRNA-1 |
chr1_4 | exon | 70691687 | 70691836 | 70691687 | ID=Msa0182280-mRNA-1:exon:23665;Parent=Msa0182280-mRNA-1 |
chr1_4 | five_prime_UTR | 70691693 | 70691836 | 70691693 | ID=Msa0182280-mRNA-1:five_prime_utr;Parent=Msa0182280-mRNA-1 |
chr1_4 | CDS | 70691687 | 70691692 | 70691687 | ID=Msa0182280-mRNA-1:cds;Parent=Msa0182280-mRNA-1 |
chr1_4 | CDS | 70691530 | 70691599 | 70691530 | ID=Msa0182280-mRNA-1:cds;Parent=Msa0182280-mRNA-1 |
chr1_4 | CDS | 70691348 | 70691415 | 70691348 | ID=Msa0182280-mRNA-1:cds;Parent=Msa0182280-mRNA-1 |
chr1_4 | CDS | 70691109 | 70691251 | 70691109 | ID=Msa0182280-mRNA-1:cds;Parent=Msa0182280-mRNA-1 |
chr1_4 | CDS | 70690446 | 70690653 | 70690446 | ID=Msa0182280-mRNA-1:cds;Parent=Msa0182280-mRNA-1 |
chr1_4 | CDS | 70690033 | 70690200 | 70690033 | ID=Msa0182280-mRNA-1:cds;Parent=Msa0182280-mRNA-1 |
chr1_4 | three_prime_UTR | 70690028 | 70690032 | 70690028 | ID=Msa0182280-mRNA-1:three_prime_utr;Parent=Msa0182280-mRNA-1 |
chr1_4 | three_prime_UTR | 70688740 | 70689205 | 70688740 | ID=Msa0182280-mRNA-1:three_prime_utr;Parent=Msa0182280-mRNA-1 |
Gene Sequence |
Protein sequence |