Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107650 | XP_013449721.1 | 89.945 | 547 | 15 | 1 | 1 | 507 | 1 | 547 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107650 | sp|F4IQV7|SCY2_ARATH | 66.469 | 507 | 121 | 5 | 47 | 507 | 72 | 575 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107650 | A0A072U218 | 89.945 | 547 | 15 | 1 | 1 | 507 | 1 | 547 | 0.0 | 993 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa1107650 | 0.805219 | 1.483768e-49 | -8.615850e-47 |
| Msa0029020 | Msa1107650 | -0.801953 | 7.060498e-49 | -8.615850e-47 |
| Msa0030400 | Msa1107650 | 0.801778 | 7.668993e-49 | -8.615850e-47 |
| Msa0070090 | Msa1107650 | 0.802888 | 4.530530e-49 | -8.615850e-47 |
| Msa0670690 | Msa1107650 | 0.827716 | 1.341350e-54 | -8.615850e-47 |
| Msa0670700 | Msa1107650 | 0.827201 | 1.782771e-54 | -8.615850e-47 |
| Msa0698480 | Msa1107650 | 0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0698650 | Msa1107650 | 0.804081 | 2.562950e-49 | -8.615850e-47 |
| Msa0727300 | Msa1107650 | 0.819757 | 9.823486e-53 | -8.615850e-47 |
| Msa0169050 | Msa1107650 | -0.825681 | 4.106503e-54 | -8.615850e-47 |
| Msa0421390 | Msa1107650 | 0.802064 | 6.698137e-49 | -8.615850e-47 |
| Msa0453220 | Msa1107650 | 0.800334 | 1.513380e-48 | -8.615850e-47 |
| Msa1075940 | Msa1107650 | 0.903800 | 2.384144e-79 | -8.615850e-47 |
| Msa0276610 | Msa1107650 | 0.825087 | 5.676002e-54 | -8.615850e-47 |
| Msa1107650 | Msa1116850 | 0.812318 | 4.502664e-51 | -8.615850e-47 |
| Msa1107650 | Msa1130730 | 0.806807 | 6.875626e-50 | -8.615850e-47 |
| Msa1107650 | Msa1145930 | 0.820505 | 6.621729e-53 | -8.615850e-47 |
| Msa1107650 | Msa1157310 | 0.808575 | 2.895204e-50 | -8.615850e-47 |
| Msa1107650 | Msa1194170 | -0.821296 | 4.354771e-53 | -8.615850e-47 |
| Msa1107650 | Msa1457070 | 0.825028 | 5.859308e-54 | -8.615850e-47 |
| Msa0535020 | Msa1107650 | 0.814800 | 1.281260e-51 | -8.615850e-47 |
| Msa0535050 | Msa1107650 | 0.810851 | 9.383648e-51 | -8.615850e-47 |
| Msa0561420 | Msa1107650 | 0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0565530 | Msa1107650 | 0.809303 | 2.022522e-50 | -8.615850e-47 |
| Msa0575540 | Msa1107650 | 0.820250 | 7.574737e-53 | -8.615850e-47 |
| Msa0886660 | Msa1107650 | 0.800625 | 1.320354e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107650 | MtrunA17_Chr7g0259761 | 89.945 | 547 | 15 | 1 | 1 | 507 | 1 | 547 | 0.0 | 993 |
| Msa1107650 | MtrunA17_Chr2g0305781 | 27.723 | 303 | 203 | 7 | 118 | 417 | 130 | 419 | 2.63e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107650 | AT2G31530.1 | 66.469 | 507 | 121 | 5 | 47 | 507 | 72 | 575 | 0.0 | 664 |
| Msa1107650 | AT2G18710.1 | 28.713 | 303 | 200 | 7 | 118 | 417 | 133 | 422 | 1.57e-22 | 101 |
Find 140 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACTGGGCTTTGCAATTA+TGG | 0.151252 | 7_3:+49760424 | Msa1107650:CDS |
| GATTATATGAGCTTTGTTTC+TGG | 0.226385 | 7_3:+49758839 | Msa1107650:CDS |
| AGGTGAATTTCTTGTGAAAA+TGG | 0.231056 | 7_3:-49758471 | None:intergenic |
| TTTCAGCTGGTGGATGTCAC+TGG | 0.231362 | 7_3:+49760409 | Msa1107650:intron |
| TGGGTTTGGGTTGGAAATTG+TGG | 0.251234 | 7_3:-49758421 | None:intergenic |
| CTCTTCCTGGATTTGATAGA+AGG | 0.272274 | 7_3:+49758804 | Msa1107650:CDS |
| GGGTCTATTGTTAAGTGTTT+TGG | 0.277974 | 7_3:+49764111 | Msa1107650:CDS |
| AACCTATTCTTGAACATTCT+AGG | 0.278697 | 7_3:-49758653 | None:intergenic |
| TATGGACACATTACACAAAA+TGG | 0.280313 | 7_3:+49761410 | Msa1107650:CDS |
| GGGAATTAAATCTGGTTTGT+AGG | 0.283145 | 7_3:+49764885 | Msa1107650:three_prime_UTR |
| AGAGATTAAAGGCCACTTTA+AGG | 0.285592 | 7_3:-49765146 | None:intergenic |
| CAATTTATGCTGCTAGTTAC+AGG | 0.287034 | 7_3:+49760483 | Msa1107650:CDS |
| CCTTATGTGCTTGCAGTATT+GGG | 0.288214 | 7_3:+49762082 | Msa1107650:CDS |
| CCATCGCTACCATGAGTTTC+CGG | 0.288886 | 7_3:-49758590 | None:intergenic |
| GGGTTTGGGTTGGAAATTGT+GGG | 0.289740 | 7_3:-49758420 | None:intergenic |
| ATATTATTGGAGTGTGTTAT+AGG | 0.291038 | 7_3:-49765247 | None:intergenic |
| TCCTTCACATGCTCCCAAAA+AGG | 0.297381 | 7_3:-49762905 | None:intergenic |
| TATGGCTCCACTTCAGTAAT+AGG | 0.301136 | 7_3:-49762569 | None:intergenic |
| TTTATATTGAAAGGAATATA+TGG | 0.309189 | 7_3:-49762587 | None:intergenic |
| GTGGAGAATCGTGTTGGGTT+TGG | 0.313946 | 7_3:-49758435 | None:intergenic |
| GAAGACAAAGAAGGCATATA+TGG | 0.314431 | 7_3:-49762978 | None:intergenic |
| CGATCTTCTAAGTTCAATAA+TGG | 0.330086 | 7_3:-49764691 | None:intergenic |
| TGGAGAATCGTGTTGGGTTT+GGG | 0.334662 | 7_3:-49758434 | None:intergenic |
| CTATTAATTGGCAGTTTGCT+TGG | 0.335480 | 7_3:+49762878 | Msa1107650:intron |
| TTGTAGGTTCAAACATGTTA+TGG | 0.335853 | 7_3:+49760861 | Msa1107650:intron |
| ATATGTGTTGGAATACTGAT+AGG | 0.336285 | 7_3:+49761384 | Msa1107650:CDS |
| GCCTTATGTGCTTGCAGTAT+TGG | 0.336942 | 7_3:+49762081 | Msa1107650:CDS |
| TTTCTGAATTTCGTGCGTTT+TGG | 0.343082 | 7_3:+49758674 | Msa1107650:CDS |
| AAAGTAAAGCTTCAGTACTA+TGG | 0.343796 | 7_3:+49762157 | Msa1107650:CDS |
| CGAAGCAATTGTTGCTTCTC+CGG | 0.345942 | 7_3:+49758613 | Msa1107650:CDS |
| ACAAAGCTCATATAATCTTT+AGG | 0.351174 | 7_3:-49758833 | None:intergenic |
| AGATTACTAGCAATGCTTAA+TGG | 0.357115 | 7_3:-49764925 | None:intergenic |
| GTTGCAGTTGCTTCCATGGC+TGG | 0.361529 | 7_3:-49758368 | None:intergenic |
| GGTTTCAACTCTACGGTTCC+CGG | 0.365609 | 7_3:-49758632 | None:intergenic |
| GTGTTCTCGATCACTATTTA+CGG | 0.373895 | 7_3:+49764146 | Msa1107650:CDS |
| GCAGCCCTGATCAATTATAT+TGG | 0.375075 | 7_3:-49764833 | None:intergenic |
| GTGTTATAGGAGTGTGTTAG+AGG | 0.375321 | 7_3:-49765234 | None:intergenic |
| GCCTTTCCAAGCATCGTCGC+TGG | 0.375388 | 7_3:+49762653 | Msa1107650:CDS |
| TGGAATACTGATAGGGTATA+TGG | 0.386400 | 7_3:+49761392 | Msa1107650:CDS |
| ACCATATCAGAATCTGGATT+TGG | 0.388043 | 7_3:+49760937 | Msa1107650:CDS |
| AAAATGGTAACTCAACTTTC+AGG | 0.389765 | 7_3:+49761426 | Msa1107650:CDS |
| TTTGTTTCTGGTTCTTCTGT+TGG | 0.390133 | 7_3:+49758851 | Msa1107650:CDS |
| TATTAATTGGCAGTTTGCTT+GGG | 0.396305 | 7_3:+49762879 | Msa1107650:intron |
| ACCAAATCCAGATTCTGATA+TGG | 0.401944 | 7_3:-49760938 | None:intergenic |
| TTCAGCTGGTGGATGTCACT+GGG | 0.402539 | 7_3:+49760410 | Msa1107650:intron |
| TTGTAGTAACTGAAGGTTGC+AGG | 0.404580 | 7_3:+49762134 | Msa1107650:CDS |
| GCCTTTAATCTCTCCAGAAA+AGG | 0.405249 | 7_3:+49765156 | Msa1107650:three_prime_UTR |
| AACTGCCCACATAGTGACTA+TGG | 0.405691 | 7_3:-49762113 | None:intergenic |
| TTCCTTCTCTAGTAAAGTTA+CGG | 0.406548 | 7_3:+49760226 | Msa1107650:CDS |
| CTAGCAGCATAAATTGAGTA+TGG | 0.406774 | 7_3:-49760476 | None:intergenic |
| AAAGTTACGGAAAGAAGGTT+TGG | 0.410003 | 7_3:+49760239 | Msa1107650:CDS |
| AACCTAGAATGTTCAAGAAT+AGG | 0.412141 | 7_3:+49758651 | Msa1107650:CDS |
| CTTAATGTGCGGCGTATGAT+TGG | 0.412667 | 7_3:-49758540 | None:intergenic |
| CCCAATACTGCAAGCACATA+AGG | 0.415294 | 7_3:-49762082 | None:intergenic |
| ATTAAGCATTGCTAGTAATC+TGG | 0.415917 | 7_3:+49764927 | Msa1107650:three_prime_UTR |
| ATCTCTCCAGAAAAGGGCCT+TGG | 0.418670 | 7_3:+49765163 | Msa1107650:three_prime_UTR |
| ACAACTTTGTTGTTGGTTTG+TGG | 0.426570 | 7_3:+49760886 | Msa1107650:CDS |
| CTAGTAAAGTTACGGAAAGA+AGG | 0.428652 | 7_3:+49760234 | Msa1107650:CDS |
| TGTGATACCATATCAGAATC+TGG | 0.430533 | 7_3:+49760931 | Msa1107650:CDS |
| GGTTTGGGTTGGAAATTGTG+GGG | 0.436806 | 7_3:-49758419 | None:intergenic |
| AGGTACGAGGTGGTCAAAAC+AGG | 0.437157 | 7_3:-49762626 | None:intergenic |
| TATTTACGGCGTACCAATGC+TGG | 0.440144 | 7_3:+49764160 | Msa1107650:CDS |
| GGGGTATACCTGCATAATAA+TGG | 0.440332 | 7_3:-49759916 | None:intergenic |
| TTCAAAGCATTGCTTAAGCC+TGG | 0.444069 | 7_3:-49764735 | None:intergenic |
| GTTTGGGTTGGAAATTGTGG+GGG | 0.451926 | 7_3:-49758418 | None:intergenic |
| CCAAGCTTCTTGGAAATACT+AGG | 0.454747 | 7_3:-49764855 | None:intergenic |
| GAGTCGGTCGGAGAAGTTAA+CGG | 0.456852 | 7_3:-49758513 | None:intergenic |
| TATGGTGACAACTTTGTTGT+TGG | 0.460090 | 7_3:+49760879 | Msa1107650:CDS |
| TTTGACCACCTCGTACCTCT+TGG | 0.461703 | 7_3:+49762631 | Msa1107650:CDS |
| TTCCGTAACTTTACTAGAGA+AGG | 0.462081 | 7_3:-49760228 | None:intergenic |
| TCGCGTTGCAGTTGCTTCCA+TGG | 0.464041 | 7_3:-49758372 | None:intergenic |
| ACCAATGCTGGATTTGCCAT+TGG | 0.466179 | 7_3:+49764172 | Msa1107650:CDS |
| GAATCGTGTTGGGTTTGGGT+TGG | 0.466366 | 7_3:-49758430 | None:intergenic |
| ATGTGTAATGTAGGTTATGT+AGG | 0.476770 | 7_3:+49765113 | Msa1107650:three_prime_UTR |
| CCTAGTATTTCCAAGAAGCT+TGG | 0.480992 | 7_3:+49764855 | Msa1107650:three_prime_UTR |
| TCTGAGGACTGTTTCCAAGC+TGG | 0.485783 | 7_3:-49759884 | None:intergenic |
| ATAGATACTATGTGTAATGT+AGG | 0.488414 | 7_3:+49765104 | Msa1107650:three_prime_UTR |
| ATTGGAAAATCTGCAGAGTA+AGG | 0.490190 | 7_3:-49764815 | None:intergenic |
| AAAACAGGCTGCATCCCTGC+TGG | 0.490762 | 7_3:-49762611 | None:intergenic |
| GAAGCAATTGTTGCTTCTCC+GGG | 0.492225 | 7_3:+49758614 | Msa1107650:CDS |
| GTAAGGATGCTGACGAAAGC+AGG | 0.492330 | 7_3:-49764798 | None:intergenic |
| TGCGACCCTAGCATTTCTCT+TGG | 0.495209 | 7_3:-49765210 | None:intergenic |
| TTCTGTTGGTGCTGAACCGT+GGG | 0.499169 | 7_3:+49762946 | Msa1107650:CDS |
| AATAGCATCCATTATTATGC+AGG | 0.500671 | 7_3:+49759908 | Msa1107650:CDS |
| CATTCTAGGTTTCAACTCTA+CGG | 0.501325 | 7_3:-49758639 | None:intergenic |
| TTGCAGTGAGTGCTGTTAGT+TGG | 0.503068 | 7_3:+49762056 | Msa1107650:intron |
| CCTTTAATCTCTCCAGAAAA+GGG | 0.505363 | 7_3:+49765157 | Msa1107650:three_prime_UTR |
| TGTGCGGCGTATGATTGGTT+CGG | 0.506219 | 7_3:-49758535 | None:intergenic |
| CTGAAAGAAATCAGAAAATG+AGG | 0.509488 | 7_3:-49764995 | None:intergenic |
| CCTGCTGGATTTATATTGAA+AGG | 0.509502 | 7_3:-49762596 | None:intergenic |
| CCTTTCAATATAAATCCAGC+AGG | 0.511255 | 7_3:+49762596 | Msa1107650:CDS |
| TCTCCAGAAAAGGGCCTTGG+TGG | 0.511496 | 7_3:+49765166 | Msa1107650:three_prime_UTR |
| CGATATCAAATATATTGAAA+AGG | 0.513329 | 7_3:-49763000 | None:intergenic |
| CCTTTCCAAGCATCGTCGCT+GGG | 0.515772 | 7_3:+49762654 | Msa1107650:CDS |
| AGCAATGCTTTGAAACGCTA+TGG | 0.526091 | 7_3:+49764744 | Msa1107650:CDS |
| ATCAACCTTCTATCAAATCC+AGG | 0.531323 | 7_3:-49758809 | None:intergenic |
| CAAGCATATAATGTGATGCC+AGG | 0.532880 | 7_3:+49764717 | Msa1107650:CDS |
| TCAGCACCAACAGAAGTGTC+AGG | 0.534627 | 7_3:-49762938 | None:intergenic |
| CTTCTATCAAATCCAGGAAG+AGG | 0.536990 | 7_3:-49758803 | None:intergenic |
| CAGAAAAGGGCCTTGGTGGT+AGG | 0.542081 | 7_3:+49765170 | Msa1107650:three_prime_UTR |
| GCGTATGATTGGTTCGGAGT+CGG | 0.546875 | 7_3:-49758529 | None:intergenic |
| CAGTGAGTGCTGTTAGTTGG+TGG | 0.551689 | 7_3:+49762059 | Msa1107650:intron |
| TTAATTGTGATTAGTCGTGT+TGG | 0.553472 | 7_3:+49758770 | Msa1107650:CDS |
| ACCAATGGCAAATCCAGCAT+TGG | 0.555624 | 7_3:-49764173 | None:intergenic |
| ATTGAAAAGGAAGACAAAGA+AGG | 0.556399 | 7_3:-49762987 | None:intergenic |
| TTACGGAAAGAAGGTTTGGA+TGG | 0.557913 | 7_3:+49760243 | Msa1107650:CDS |
| TCTTCACCATAGTCACTATG+TGG | 0.559637 | 7_3:+49762107 | Msa1107650:CDS |
| GGAGATTAAACACCTTAAAG+TGG | 0.559820 | 7_3:+49765134 | Msa1107650:three_prime_UTR |
| TTGTAACCAAGAGAAATGCT+AGG | 0.560083 | 7_3:+49765204 | Msa1107650:three_prime_UTR |
| CTTCTGTTGGTGCTGAACCG+TGG | 0.562221 | 7_3:+49762945 | Msa1107650:CDS |
| CCGGAAACTCATGGTAGCGA+TGG | 0.567781 | 7_3:+49758590 | Msa1107650:CDS |
| GCAATCACCTATTACTGAAG+TGG | 0.575127 | 7_3:+49762562 | Msa1107650:CDS |
| TCAAACTTGCTTCTGCTGCA+AGG | 0.576107 | 7_3:+49762182 | Msa1107650:CDS |
| GAAATTCTGCAGTGAAGCGA+AGG | 0.577651 | 7_3:-49758491 | None:intergenic |
| ATCGAGAACACTTGAAGTAG+TGG | 0.586824 | 7_3:-49764134 | None:intergenic |
| TACGGAAAGAAGGTTTGGAT+GGG | 0.589972 | 7_3:+49760244 | Msa1107650:CDS |
| TAGAACTGATGTAAAACCAA+TGG | 0.590223 | 7_3:-49764188 | None:intergenic |
| TTGAATCCTGACACTTCTGT+TGG | 0.594771 | 7_3:+49762932 | Msa1107650:CDS |
| ATAATGGATGCTATTATCTG+AGG | 0.596086 | 7_3:-49759900 | None:intergenic |
| TATGTGTTGGAATACTGATA+GGG | 0.596990 | 7_3:+49761385 | Msa1107650:CDS |
| CGAAAGCAGGAATGATAGCA+TGG | 0.600944 | 7_3:-49764785 | None:intergenic |
| TGTAACCAAGAGAAATGCTA+GGG | 0.607102 | 7_3:+49765205 | Msa1107650:three_prime_UTR |
| TAGCTTCTGACAGATGAACT+TGG | 0.608534 | 7_3:+49759828 | Msa1107650:intron |
| CCCAGCGACGATGCTTGGAA+AGG | 0.611110 | 7_3:-49762654 | None:intergenic |
| TGTTATAGGAGTGTGTTAGA+GGG | 0.615626 | 7_3:-49765233 | None:intergenic |
| GTGGTGCAATGACTATTACA+TGG | 0.621268 | 7_3:+49760905 | Msa1107650:CDS |
| GGGGTGGAAGTGATAGAAGG+AGG | 0.625677 | 7_3:-49758399 | None:intergenic |
| ACTGCTGCGAAGTCCAGCCA+TGG | 0.633573 | 7_3:+49758355 | Msa1107650:exon |
| ATGATTGGTTCGGAGTCGGT+CGG | 0.641551 | 7_3:-49758525 | None:intergenic |
| AAGAGACAGCTTCAGCTCAG+AGG | 0.651403 | 7_3:-49759859 | None:intergenic |
| TATATGGAATAGTAGACCCA+CGG | 0.665297 | 7_3:-49762962 | None:intergenic |
| AAAACTTCTTGACTCAAGAG+CGG | 0.670199 | 7_3:-49758566 | None:intergenic |
| ATTACTAATGCCTACCACCA+AGG | 0.674198 | 7_3:-49765180 | None:intergenic |
| CTTTCAATATAAATCCAGCA+GGG | 0.675202 | 7_3:+49762597 | Msa1107650:CDS |
| CGATGCTTGGAAAGGCCAAG+AGG | 0.683633 | 7_3:-49762646 | None:intergenic |
| CTTCACCATAGTCACTATGT+GGG | 0.692600 | 7_3:+49762108 | Msa1107650:CDS |
| TGGAAAGGCCAAGAGGTACG+AGG | 0.696124 | 7_3:-49762639 | None:intergenic |
| TGGGCAGTTGTAGTAACTGA+AGG | 0.702415 | 7_3:+49762127 | Msa1107650:CDS |
| AAGAGCGGAGTCTTAATGTG+CGG | 0.706521 | 7_3:-49758551 | None:intergenic |
| AAAGGCCAAGAGGTACGAGG+TGG | 0.736328 | 7_3:-49762636 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr7_3:49758312-49758331 | None:intergenic | 0.0% |
| !!! | TTTTTTAATATTGATTCATA+TGG | + | chr7_3:49759031-49759050 | Msa1107650:intron | 10.0% |
| !!! | TTTTATGCTTTATAAAAATA+CGG | + | chr7_3:49760742-49760761 | Msa1107650:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:49761907-49761926 | None:intergenic | 100.0% |
| !! | TGATAATCATATATAACTAA+AGG | - | chr7_3:49760028-49760047 | None:intergenic | 15.0% |
| !! | AAAACAAAGAAATGAAATTT+AGG | - | chr7_3:49760726-49760745 | None:intergenic | 15.0% |
| !!! | TTATGCATGAATATAAATTT+TGG | + | chr7_3:49761046-49761065 | Msa1107650:intron | 15.0% |
| !! | TATTCTACAATTTCTATTTA+TGG | + | chr7_3:49761212-49761231 | Msa1107650:intron | 15.0% |
| !! | TTTATATTGAAAGGAATATA+TGG | - | chr7_3:49762590-49762609 | None:intergenic | 15.0% |
| !!! | TTTCTAAAATTGCTATTAAT+TGG | + | chr7_3:49762866-49762885 | Msa1107650:intron | 15.0% |
| !!! | CAGTTGAAATATATTTTTAA+GGG | - | chr7_3:49763620-49763639 | None:intergenic | 15.0% |
| !!! | TCAGTTGAAATATATTTTTA+AGG | - | chr7_3:49763621-49763640 | None:intergenic | 15.0% |
| !!! | ACTGATATTTTAATATAGTA+TGG | - | chr7_3:49763810-49763829 | None:intergenic | 15.0% |
| !! | TTAAATTTCTAAGTATCAAA+AGG | - | chr7_3:49764040-49764059 | None:intergenic | 15.0% |
| !!! | CATTTTTTAAAAGTGAGATT+AGG | + | chr7_3:49758723-49758742 | Msa1107650:CDS | 20.0% |
| !!! | CTTGTAAGTTTTCTAAAAAA+TGG | - | chr7_3:49759217-49759236 | None:intergenic | 20.0% |
| !! | TACATTTCTTTGTATATCTT+TGG | - | chr7_3:49759244-49759263 | None:intergenic | 20.0% |
| !! | AAAGATATACAAAGAAATGT+AGG | + | chr7_3:49759243-49759262 | Msa1107650:intron | 20.0% |
| !! | ATTAAATGGAGAAATGATAT+TGG | - | chr7_3:49759355-49759374 | None:intergenic | 20.0% |
| !! | TTATTGCTGAAAATTCTAAT+GGG | - | chr7_3:49759446-49759465 | None:intergenic | 20.0% |
| !! | ATTATTGCTGAAAATTCTAA+TGG | - | chr7_3:49759447-49759466 | None:intergenic | 20.0% |
| !! | ATAAGTTATTTATCCAAACA+GGG | - | chr7_3:49759513-49759532 | None:intergenic | 20.0% |
| !! | AATAAGTTATTTATCCAAAC+AGG | - | chr7_3:49759514-49759533 | None:intergenic | 20.0% |
| !! | ATTATTCAAGCGATAAAAAA+TGG | - | chr7_3:49759773-49759792 | None:intergenic | 20.0% |
| !!! | CTTAATTTCTTTCAAAGTTT+TGG | + | chr7_3:49760147-49760166 | Msa1107650:intron | 20.0% |
| !! | TATATCATGAATCACATAAA+CGG | - | chr7_3:49760356-49760375 | None:intergenic | 20.0% |
| !! | TTTATGTGATTCATGATATA+AGG | + | chr7_3:49760356-49760375 | Msa1107650:intron | 20.0% |
| !! | AATGAACAATTCATTAATTG+AGG | - | chr7_3:49760384-49760403 | None:intergenic | 20.0% |
| !! | TAGAAATTGTAGAATAACAT+AGG | - | chr7_3:49761208-49761227 | None:intergenic | 20.0% |
| !!! | AAATTTCAAAAGCGATTTTT+TGG | - | chr7_3:49761466-49761485 | None:intergenic | 20.0% |
| !! | AAAATATATATTCTAGCGTA+TGG | - | chr7_3:49761779-49761798 | None:intergenic | 20.0% |
| !! | TTAAAGTTGTAAAACATCTT+TGG | - | chr7_3:49761955-49761974 | None:intergenic | 20.0% |
| !! | TTATATCATTGAGTTATTTG+TGG | + | chr7_3:49762008-49762027 | Msa1107650:intron | 20.0% |
| !!! | AATATTAGCTTATTTGACTT+GGG | + | chr7_3:49762394-49762413 | Msa1107650:intron | 20.0% |
| !!! | TATTTTTAACAACATGTAAC+TGG | - | chr7_3:49762807-49762826 | None:intergenic | 20.0% |
| !! | CGATATCAAATATATTGAAA+AGG | - | chr7_3:49763003-49763022 | None:intergenic | 20.0% |
| !! | TGAACAATGTACTTTATATA+AGG | + | chr7_3:49763052-49763071 | Msa1107650:intron | 20.0% |
| !! | TTTATTTCGTTACAAGTTAT+TGG | + | chr7_3:49763098-49763117 | Msa1107650:intron | 20.0% |
| !!! | TTTCACAAATTGATAATTGA+TGG | + | chr7_3:49763122-49763141 | Msa1107650:intron | 20.0% |
| !!! | TAATTGATGGATTAAACTTA+AGG | + | chr7_3:49763135-49763154 | Msa1107650:intron | 20.0% |
| !!! | AAGAGAATATTTCTTCTTTT+GGG | - | chr7_3:49763479-49763498 | None:intergenic | 20.0% |
| !!! | TAAGAGAATATTTCTTCTTT+TGG | - | chr7_3:49763480-49763499 | None:intergenic | 20.0% |
| !! | CAAATATAGAAATAGTTTAC+TGG | - | chr7_3:49763558-49763577 | None:intergenic | 20.0% |
| !!! | TTTATTAACTTGTACCTTAA+TGG | + | chr7_3:49763579-49763598 | Msa1107650:intron | 20.0% |
| !! | TGAAAATTAACAATCAGAAT+AGG | - | chr7_3:49763714-49763733 | None:intergenic | 20.0% |
| !! | AATATAGTATGGAAATGAAT+TGG | - | chr7_3:49763799-49763818 | None:intergenic | 20.0% |
| !!! | TATCTATCTTGTTTAATATG+TGG | + | chr7_3:49763846-49763865 | Msa1107650:intron | 20.0% |
| !! | TATATACAGTATTGTACATT+TGG | + | chr7_3:49764566-49764585 | Msa1107650:intron | 20.0% |
| !!! | ATTTTCCAATATAATTGATC+AGG | + | chr7_3:49764828-49764847 | Msa1107650:three_prime_UTR | 20.0% |
| !!! | TTTTCCAATATAATTGATCA+GGG | + | chr7_3:49764829-49764848 | Msa1107650:three_prime_UTR | 20.0% |
| !!! | GAACTTATTTTGATGATTTT+AGG | + | chr7_3:49765021-49765040 | Msa1107650:three_prime_UTR | 20.0% |
| !!! | TTTTAGGAAAGTATTTAGTT+AGG | + | chr7_3:49765037-49765056 | Msa1107650:three_prime_UTR | 20.0% |
| !!! | AAATGGAAATTCTAGTTTTG+TGG | - | chr7_3:49758457-49758476 | None:intergenic | 25.0% |
| !!! | TTTTTAAAAGTGAGATTAGG+AGG | + | chr7_3:49758726-49758745 | Msa1107650:CDS | 25.0% |
| ! | ACAAAGCTCATATAATCTTT+AGG | - | chr7_3:49758836-49758855 | None:intergenic | 25.0% |
| !! | TTTTCATTGCAAAATCCAAA+AGG | + | chr7_3:49758924-49758943 | Msa1107650:intron | 25.0% |
| ! | TTTCATTGCAAAATCCAAAA+GGG | + | chr7_3:49758925-49758944 | Msa1107650:intron | 25.0% |
| ! | AAAACAAAAACAATAGAGAG+AGG | + | chr7_3:49759276-49759295 | Msa1107650:intron | 25.0% |
| ! | TCATTTCTCCATTTAATATG+AGG | + | chr7_3:49759358-49759377 | Msa1107650:intron | 25.0% |
| ! | AAGCACTTATGCTATAATAT+AGG | - | chr7_3:49759542-49759561 | None:intergenic | 25.0% |
| !!! | AAGCTATAACCTTTTTTCAT+AGG | + | chr7_3:49759633-49759652 | Msa1107650:intron | 25.0% |
| ! | GTTAAGCATTCATATAAAAC+AGG | + | chr7_3:49760079-49760098 | Msa1107650:intron | 25.0% |
| ! | TAAAACAGGTTACTATTATG+TGG | + | chr7_3:49760093-49760112 | Msa1107650:intron | 25.0% |
| ! | AGAAGATTAAGAGTTATATG+TGG | + | chr7_3:49760271-49760290 | Msa1107650:intron | 25.0% |
| ! | GAAGATTAAGAGTTATATGT+GGG | + | chr7_3:49760272-49760291 | Msa1107650:intron | 25.0% |
| !! | TTTTCTATATATCGTAATCC+CGG | + | chr7_3:49760619-49760638 | Msa1107650:intron | 25.0% |
| !! | CTTTTACTGAACCATAAATA+TGG | + | chr7_3:49760793-49760812 | Msa1107650:intron | 25.0% |
| !!! | AAAATATGTGTTGCTTTTGT+AGG | + | chr7_3:49760845-49760864 | Msa1107650:intron | 25.0% |
| ! | TATGATAAAGTCAAAGTTTG+TGG | - | chr7_3:49760974-49760993 | None:intergenic | 25.0% |
| ! | AACCGTAAATGATAAACAAA+TGG | + | chr7_3:49761154-49761173 | Msa1107650:intron | 25.0% |
| ! | AGCCATTTGTTTATCATTTA+CGG | - | chr7_3:49761159-49761178 | None:intergenic | 25.0% |
| ! | TGGGACAAAATATAATGAAA+TGG | + | chr7_3:49761597-49761616 | Msa1107650:intron | 25.0% |
| !! | TTTAGTTCCATTAAAAAGGA+TGG | - | chr7_3:49761649-49761668 | None:intergenic | 25.0% |
| !!! | GCATTTTAGTTCCATTAAAA+AGG | - | chr7_3:49761653-49761672 | None:intergenic | 25.0% |
| ! | TGTGAGTTCTATTATATGTT+TGG | - | chr7_3:49761724-49761743 | None:intergenic | 25.0% |
| !! | GATGTTTTACAACTTTAATC+AGG | + | chr7_3:49761957-49761976 | Msa1107650:intron | 25.0% |
| ! | ATTGAAATTGCAGATGTTAT+TGG | + | chr7_3:49762249-49762268 | Msa1107650:intron | 25.0% |
| !! | GAATATTAGCTTATTTGACT+TGG | + | chr7_3:49762393-49762412 | Msa1107650:intron | 25.0% |
| ! | GTCATAATAAATAAGGACAA+TGG | - | chr7_3:49762438-49762457 | None:intergenic | 25.0% |
| ! | ACTGTCTGTCATAATAAATA+AGG | - | chr7_3:49762445-49762464 | None:intergenic | 25.0% |
| ! | TGTAAAAATTCGTCTGAAAA+GGG | + | chr7_3:49763162-49763181 | Msa1107650:intron | 25.0% |
| ! | TTGTAGGCTGAATTAAAAAT+AGG | + | chr7_3:49763414-49763433 | Msa1107650:intron | 25.0% |
| ! | TGTAGGCTGAATTAAAAATA+GGG | + | chr7_3:49763415-49763434 | Msa1107650:intron | 25.0% |
| !! | TTAATATGTGGATTTTTCAC+AGG | + | chr7_3:49763858-49763877 | Msa1107650:intron | 25.0% |
| !! | AATATTTTCCTGTTATGTGA+TGG | + | chr7_3:49764058-49764077 | Msa1107650:intron | 25.0% |
| !! | CAAGAAATGACAAGTATTTT+GGG | - | chr7_3:49764459-49764478 | None:intergenic | 25.0% |
| !! | ATTTTCTGATTTCTTTCAGA+AGG | + | chr7_3:49764999-49765018 | Msa1107650:three_prime_UTR | 25.0% |
| ! | ATAGATACTATGTGTAATGT+AGG | + | chr7_3:49765104-49765123 | Msa1107650:three_prime_UTR | 25.0% |
| ! | AAAAAACAAGAGTCACGTTT+TGG | + | chr7_3:49758326-49758345 | Msa1107650:five_prime_UTR | 30.0% |
| AGGTGAATTTCTTGTGAAAA+TGG | - | chr7_3:49758474-49758493 | None:intergenic | 30.0% | |
| AACCTAGAATGTTCAAGAAT+AGG | + | chr7_3:49758651-49758670 | Msa1107650:CDS | 30.0% | |
| AACCTATTCTTGAACATTCT+AGG | - | chr7_3:49758656-49758675 | None:intergenic | 30.0% | |
| !!! | CGTTTTGGTTCTGTTATTAA+TGG | + | chr7_3:49758689-49758708 | Msa1107650:CDS | 30.0% |
| ! | TTAATTGTGATTAGTCGTGT+TGG | + | chr7_3:49758770-49758789 | Msa1107650:CDS | 30.0% |
| !! | GATTATATGAGCTTTGTTTC+TGG | + | chr7_3:49758839-49758858 | Msa1107650:CDS | 30.0% |
| TCCTACTAATCATTCAATCA+TGG | - | chr7_3:49758951-49758970 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTCAAACTATCAG+CGG | - | chr7_3:49759116-49759135 | None:intergenic | 30.0% |
| CGCTGATAGTTTGAAAAAAT+GGG | + | chr7_3:49759114-49759133 | Msa1107650:intron | 30.0% | |
| CACTGATACCTCATATTAAA+TGG | - | chr7_3:49759369-49759388 | None:intergenic | 30.0% | |
| ATTTCATTCCCCATATAATG+GGG | - | chr7_3:49759405-49759424 | None:intergenic | 30.0% | |
| GATTTCATTCCCCATATAAT+GGG | - | chr7_3:49759406-49759425 | None:intergenic | 30.0% | |
| AGATTTCATTCCCCATATAA+TGG | - | chr7_3:49759407-49759426 | None:intergenic | 30.0% | |
| ACTTATGCTATAATATAGGC+TGG | - | chr7_3:49759538-49759557 | None:intergenic | 30.0% | |
| CCAAGATAACCTATGAAAAA+AGG | - | chr7_3:49759645-49759664 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTCATAGGTTATCT+TGG | + | chr7_3:49759642-49759661 | Msa1107650:intron | 30.0% |
| CATGAGTTTATACATGTGAA+CGG | + | chr7_3:49759796-49759815 | Msa1107650:intron | 30.0% | |
| !! | ATAATGGATGCTATTATCTG+AGG | - | chr7_3:49759903-49759922 | None:intergenic | 30.0% |
| AATAGCATCCATTATTATGC+AGG | + | chr7_3:49759908-49759927 | Msa1107650:CDS | 30.0% | |
| !!! | TTTTCTGCTTGTTACTTTCA+AGG | + | chr7_3:49759984-49760003 | Msa1107650:intron | 30.0% |
| AAAGGAAGTTAAACATCCTT+TGG | - | chr7_3:49760010-49760029 | None:intergenic | 30.0% | |
| TTCCTTCTCTAGTAAAGTTA+CGG | + | chr7_3:49760226-49760245 | Msa1107650:CDS | 30.0% | |
| TATTAGCTCACTGTTTGATA+TGG | - | chr7_3:49760307-49760326 | None:intergenic | 30.0% | |
| ! | GCTTATGCTATCAAATTTTG+AGG | - | chr7_3:49760579-49760598 | None:intergenic | 30.0% |
| ! | CAAAATTTGATAGCATAAGC+CGG | + | chr7_3:49760579-49760598 | Msa1107650:intron | 30.0% |
| ! | AAAATTTGATAGCATAAGCC+GGG | + | chr7_3:49760580-49760599 | Msa1107650:intron | 30.0% |
| TTACTGAACCATAAATATGG+TGG | + | chr7_3:49760796-49760815 | Msa1107650:intron | 30.0% | |
| TTGTAGGTTCAAACATGTTA+TGG | + | chr7_3:49760861-49760880 | Msa1107650:intron | 30.0% | |
| ATTTGATATTTGCCTTCTTC+AGG | + | chr7_3:49761342-49761361 | Msa1107650:intron | 30.0% | |
| ! | TCATCTCTTTTCATATGTGT+TGG | + | chr7_3:49761372-49761391 | Msa1107650:CDS | 30.0% |
| ATATGTGTTGGAATACTGAT+AGG | + | chr7_3:49761384-49761403 | Msa1107650:CDS | 30.0% | |
| TATGTGTTGGAATACTGATA+GGG | + | chr7_3:49761385-49761404 | Msa1107650:CDS | 30.0% | |
| TATGGACACATTACACAAAA+TGG | + | chr7_3:49761410-49761429 | Msa1107650:CDS | 30.0% | |
| AAAATGGTAACTCAACTTTC+AGG | + | chr7_3:49761426-49761445 | Msa1107650:CDS | 30.0% | |
| TAAGTCCAAATTTAAGCTAG+AGG | - | chr7_3:49761507-49761526 | None:intergenic | 30.0% | |
| ! | TCATTATATTTTGTCCCATC+TGG | - | chr7_3:49761595-49761614 | None:intergenic | 30.0% |
| !! | TTTGGTTCCATCCTTTTTAA+TGG | + | chr7_3:49761639-49761658 | Msa1107650:intron | 30.0% |
| AAAGTAAAGCTTCAGTACTA+TGG | + | chr7_3:49762157-49762176 | Msa1107650:CDS | 30.0% | |
| CAATTTCAATGAGGATAACA+AGG | - | chr7_3:49762239-49762258 | None:intergenic | 30.0% | |
| TAACATCTGCAATTTCAATG+AGG | - | chr7_3:49762248-49762267 | None:intergenic | 30.0% | |
| ! | GGCATGAAAGTCTTAATTTT+TGG | - | chr7_3:49762523-49762542 | None:intergenic | 30.0% |
| CTTTCAATATAAATCCAGCA+GGG | + | chr7_3:49762597-49762616 | Msa1107650:CDS | 30.0% | |
| !! | GTGTCATTTGAAATGCAAAA+CGG | - | chr7_3:49762690-49762709 | None:intergenic | 30.0% |
| ACTTCACAAATGAGTAGTAA+AGG | - | chr7_3:49762842-49762861 | None:intergenic | 30.0% | |
| ! | TATTAATTGGCAGTTTGCTT+GGG | + | chr7_3:49762879-49762898 | Msa1107650:intron | 30.0% |
| ATTGAAAAGGAAGACAAAGA+AGG | - | chr7_3:49762990-49763009 | None:intergenic | 30.0% | |
| CTGTAAAAATTCGTCTGAAA+AGG | + | chr7_3:49763161-49763180 | Msa1107650:intron | 30.0% | |
| ! | TGCTACATCAGTAACATTTT+GGG | - | chr7_3:49763254-49763273 | None:intergenic | 30.0% |
| CATTTATACTCTGCAAATCT+TGG | - | chr7_3:49763336-49763355 | None:intergenic | 30.0% | |
| TGTTTCTCTAGTACTATTGT+AGG | + | chr7_3:49763398-49763417 | Msa1107650:intron | 30.0% | |
| TTTCTTAACATATACCCCAA+GGG | - | chr7_3:49763456-49763475 | None:intergenic | 30.0% | |
| ATATATTTCAACTGAGACCA+TGG | + | chr7_3:49763626-49763645 | Msa1107650:intron | 30.0% | |
| ! | TTTTTCCATATTCAAGTCCA+TGG | - | chr7_3:49763646-49763665 | None:intergenic | 30.0% |
| AAGTAATCAGCAATTTCCTT+TGG | - | chr7_3:49763892-49763911 | None:intergenic | 30.0% | |
| AGAATACCAAATATTAAGCC+CGG | + | chr7_3:49763928-49763947 | Msa1107650:intron | 30.0% | |
| ! | TACCTCATGAAAATTTTGCA+GGG | + | chr7_3:49764089-49764108 | Msa1107650:intron | 30.0% |
| TAGAACTGATGTAAAACCAA+TGG | - | chr7_3:49764191-49764210 | None:intergenic | 30.0% | |
| ACTTTGCATTCAAGCTTAAA+TGG | + | chr7_3:49764254-49764273 | Msa1107650:intron | 30.0% | |
| ! | CCAAGAAATGACAAGTATTT+TGG | - | chr7_3:49764460-49764479 | None:intergenic | 30.0% |
| ! | CCAAAATACTTGTCATTTCT+TGG | + | chr7_3:49764457-49764476 | Msa1107650:intron | 30.0% |
| TCTCGTCTACAGAAAATTAT+TGG | + | chr7_3:49764507-49764526 | Msa1107650:intron | 30.0% | |
| ACCTGGAAAAATAAAACCAA+GGG | - | chr7_3:49764666-49764685 | None:intergenic | 30.0% | |
| AACCTGGAAAAATAAAACCA+AGG | - | chr7_3:49764667-49764686 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTATTTTTCCAGGT+TGG | + | chr7_3:49764666-49764685 | Msa1107650:intron | 30.0% |
| CGATCTTCTAAGTTCAATAA+TGG | - | chr7_3:49764694-49764713 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGGGGAATTAAATC+TGG | + | chr7_3:49764877-49764896 | Msa1107650:three_prime_UTR | 30.0% |
| ! | TTGTAGGTCTTTTAGTATTG+AGG | + | chr7_3:49764901-49764920 | Msa1107650:three_prime_UTR | 30.0% |
| AGATTACTAGCAATGCTTAA+TGG | - | chr7_3:49764928-49764947 | None:intergenic | 30.0% | |
| ! | ATTAAGCATTGCTAGTAATC+TGG | + | chr7_3:49764927-49764946 | Msa1107650:three_prime_UTR | 30.0% |
| ! | AGAAAATGAGGCTTTTGAAT+CGG | - | chr7_3:49764986-49765005 | None:intergenic | 30.0% |
| CTGAAAGAAATCAGAAAATG+AGG | - | chr7_3:49764998-49765017 | None:intergenic | 30.0% | |
| ATGTGTAATGTAGGTTATGT+AGG | + | chr7_3:49765113-49765132 | Msa1107650:three_prime_UTR | 30.0% | |
| AAAACTTCTTGACTCAAGAG+CGG | - | chr7_3:49758569-49758588 | None:intergenic | 35.0% | |
| ! | CTTGAGTCAAGAAGTTTTTC+CGG | + | chr7_3:49758571-49758590 | Msa1107650:CDS | 35.0% |
| CATTCTAGGTTTCAACTCTA+CGG | - | chr7_3:49758642-49758661 | None:intergenic | 35.0% | |
| ! | TTTCTGAATTTCGTGCGTTT+TGG | + | chr7_3:49758674-49758693 | Msa1107650:CDS | 35.0% |
| !! | GGTTATTTTATTCCTCTTCC+TGG | + | chr7_3:49758791-49758810 | Msa1107650:CDS | 35.0% |
| ATCAACCTTCTATCAAATCC+AGG | - | chr7_3:49758812-49758831 | None:intergenic | 35.0% | |
| !! | TTTGTTTCTGGTTCTTCTGT+TGG | + | chr7_3:49758851-49758870 | Msa1107650:CDS | 35.0% |
| GCCATGATTGAATGATTAGT+AGG | + | chr7_3:49758947-49758966 | Msa1107650:intron | 35.0% | |
| ! | GAAATGTTTGCTAGTGGTTA+TGG | + | chr7_3:49758971-49758990 | Msa1107650:intron | 35.0% |
| GGAAATTAGTTGTAAGCTCA+AGG | + | chr7_3:49758992-49759011 | Msa1107650:intron | 35.0% | |
| CCGCTGATAGTTTGAAAAAA+TGG | + | chr7_3:49759113-49759132 | Msa1107650:intron | 35.0% | |
| TTGAATGTAACCATACGTGT+TGG | + | chr7_3:49759142-49759161 | Msa1107650:intron | 35.0% | |
| ACTAGAGACACGTTTAATAG+AGG | + | chr7_3:49759175-49759194 | Msa1107650:intron | 35.0% | |
| AGGTTATCTTGGAGACTTTA+TGG | + | chr7_3:49759653-49759672 | Msa1107650:intron | 35.0% | |
| ! | AAAAACAGCACTTTTACACC+AGG | - | chr7_3:49759744-49759763 | None:intergenic | 35.0% |
| AACAAACTCAGTGAACGAAA+GGG | - | chr7_3:49759939-49759958 | None:intergenic | 35.0% | |
| TAACAAACTCAGTGAACGAA+AGG | - | chr7_3:49759940-49759959 | None:intergenic | 35.0% | |
| ACAACTAAGATGAACAACAC+TGG | - | chr7_3:49760122-49760141 | None:intergenic | 35.0% | |
| GTGTAGATGCAGTTCATAAA+AGG | - | chr7_3:49760173-49760192 | None:intergenic | 35.0% | |
| TACACATCATATTCATGTGC+AGG | + | chr7_3:49760188-49760207 | Msa1107650:intron | 35.0% | |
| TTCCGTAACTTTACTAGAGA+AGG | - | chr7_3:49760231-49760250 | None:intergenic | 35.0% | |
| CTAGTAAAGTTACGGAAAGA+AGG | + | chr7_3:49760234-49760253 | Msa1107650:CDS | 35.0% | |
| AAAGTTACGGAAAGAAGGTT+TGG | + | chr7_3:49760239-49760258 | Msa1107650:CDS | 35.0% | |
| TGTTCATTTGTTCTTTCAGC+TGG | + | chr7_3:49760396-49760415 | Msa1107650:intron | 35.0% | |
| CTAGCAGCATAAATTGAGTA+TGG | - | chr7_3:49760479-49760498 | None:intergenic | 35.0% | |
| CAATTTATGCTGCTAGTTAC+AGG | + | chr7_3:49760483-49760502 | Msa1107650:CDS | 35.0% | |
| ! | AACCATCTTTTTAACCTTCC+CGG | - | chr7_3:49760601-49760620 | None:intergenic | 35.0% |
| ACATAGCAGTGACATATCAA+CGG | + | chr7_3:49760675-49760694 | Msa1107650:intron | 35.0% | |
| GAGTTGTTCCACCATATTTA+TGG | - | chr7_3:49760807-49760826 | None:intergenic | 35.0% | |
| ! | AAATATGGTGGAACAACTCT+TGG | + | chr7_3:49760808-49760827 | Msa1107650:intron | 35.0% |
| ! | TATGGTGACAACTTTGTTGT+TGG | + | chr7_3:49760879-49760898 | Msa1107650:CDS | 35.0% |
| !! | ACAACTTTGTTGTTGGTTTG+TGG | + | chr7_3:49760886-49760905 | Msa1107650:CDS | 35.0% |
| TGTGATACCATATCAGAATC+TGG | + | chr7_3:49760931-49760950 | Msa1107650:CDS | 35.0% | |
| ACCATATCAGAATCTGGATT+TGG | + | chr7_3:49760937-49760956 | Msa1107650:CDS | 35.0% | |
| ACCAAATCCAGATTCTGATA+TGG | - | chr7_3:49760941-49760960 | None:intergenic | 35.0% | |
| AAGATAACCAGAGCATATGA+TGG | + | chr7_3:49761017-49761036 | Msa1107650:intron | 35.0% | |
| AGATAACCAGAGCATATGAT+GGG | + | chr7_3:49761018-49761037 | Msa1107650:intron | 35.0% | |
| ! | ATTTTTCCCATCATATGCTC+TGG | - | chr7_3:49761027-49761046 | None:intergenic | 35.0% |
| AAAGTCCTGAATGAAAAGAC+AGG | - | chr7_3:49761117-49761136 | None:intergenic | 35.0% | |
| ! | TGTCTTTTCATTCAGGACTT+TGG | + | chr7_3:49761116-49761135 | Msa1107650:intron | 35.0% |
| ! | GTCTTTTCATTCAGGACTTT+GGG | + | chr7_3:49761117-49761136 | Msa1107650:intron | 35.0% |
| ! | TCTTTTCATTCAGGACTTTG+GGG | + | chr7_3:49761118-49761137 | Msa1107650:intron | 35.0% |
| ! | AATGACGAAGCACTTTGAAA+AGG | - | chr7_3:49761248-49761267 | None:intergenic | 35.0% |
| GGTGTGTCTTTCAATTGAAA+TGG | - | chr7_3:49761274-49761293 | None:intergenic | 35.0% | |
| TGGAATACTGATAGGGTATA+TGG | + | chr7_3:49761392-49761411 | Msa1107650:CDS | 35.0% | |
| ! | TGTTGCCTCTAGCTTAAATT+TGG | + | chr7_3:49761499-49761518 | Msa1107650:intron | 35.0% |
| ACTTACTGTAGTAACATGTC+TGG | + | chr7_3:49761522-49761541 | Msa1107650:intron | 35.0% | |
| ! | TTGAGTAGTTTTCTTCCAGA+TGG | + | chr7_3:49761577-49761596 | Msa1107650:intron | 35.0% |
| ! | TGAGTAGTTTTCTTCCAGAT+GGG | + | chr7_3:49761578-49761597 | Msa1107650:intron | 35.0% |
| CAAAGAGAACATAACTGAAC+AGG | - | chr7_3:49761623-49761642 | None:intergenic | 35.0% | |
| CTGTTCAGTTATGTTCTCTT+TGG | + | chr7_3:49761621-49761640 | Msa1107650:intron | 35.0% | |
| TTAATATCTACTCCTTCGTC+CGG | + | chr7_3:49761832-49761851 | Msa1107650:intron | 35.0% | |
| TGGTTTGATCTAAGGGTTAA+AGG | - | chr7_3:49761881-49761900 | None:intergenic | 35.0% | |
| !!! | ATTGCCATTTTCTGACAAGT+TGG | + | chr7_3:49762306-49762325 | Msa1107650:intron | 35.0% |
| TGAACCAACTTGTCAGAAAA+TGG | - | chr7_3:49762313-49762332 | None:intergenic | 35.0% | |
| TTACATACCTCAGAAAACTG+TGG | + | chr7_3:49762345-49762364 | Msa1107650:intron | 35.0% | |
| ! | GATTCTGTTTTCATGTTCTG+TGG | + | chr7_3:49762367-49762386 | Msa1107650:intron | 35.0% |
| GACAGTTTATGTCTTTCTGA+AGG | + | chr7_3:49762459-49762478 | Msa1107650:intron | 35.0% | |
| ! | ATGCCTCTCAATTTGAAACA+GGG | + | chr7_3:49762538-49762557 | Msa1107650:intron | 35.0% |
| CCTGCTGGATTTATATTGAA+AGG | - | chr7_3:49762599-49762618 | None:intergenic | 35.0% | |
| CCTTTCAATATAAATCCAGC+AGG | + | chr7_3:49762596-49762615 | Msa1107650:CDS | 35.0% | |
| TGCATTTCAAATGACACTCT+TGG | + | chr7_3:49762693-49762712 | Msa1107650:intron | 35.0% | |
| !! | CCTCATGATTCAAGTTTTGT+CGG | + | chr7_3:49762721-49762740 | Msa1107650:intron | 35.0% |
| ! | CTATTAATTGGCAGTTTGCT+TGG | + | chr7_3:49762878-49762897 | Msa1107650:intron | 35.0% |
| TATATGGAATAGTAGACCCA+CGG | - | chr7_3:49762965-49762984 | None:intergenic | 35.0% | |
| ! | GAAGACAAAGAAGGCATATA+TGG | - | chr7_3:49762981-49763000 | None:intergenic | 35.0% |
| ! | TCAACGTTTTCATTTCAGAC+CGG | - | chr7_3:49763190-49763209 | None:intergenic | 35.0% |
| GTGTTTCAACAAAGTTTGCA+TGG | + | chr7_3:49763225-49763244 | Msa1107650:intron | 35.0% | |
| ! | GTGCTACATCAGTAACATTT+TGG | - | chr7_3:49763255-49763274 | None:intergenic | 35.0% |
| ! | CTACATGCAATGTTTAGTTC+AGG | - | chr7_3:49763368-49763387 | None:intergenic | 35.0% |
| GTTTCTTAACATATACCCCA+AGG | - | chr7_3:49763457-49763476 | None:intergenic | 35.0% | |
| ! | AATGCTAACTTGTGCCATTA+AGG | - | chr7_3:49763596-49763615 | None:intergenic | 35.0% |
| ! | TGCTGATTACTTGAACAAGA+TGG | + | chr7_3:49763900-49763919 | Msa1107650:intron | 35.0% |
| GCTGATTACTTGAACAAGAT+GGG | + | chr7_3:49763901-49763920 | Msa1107650:intron | 35.0% | |
| GAATACCAAATATTAAGCCC+GGG | + | chr7_3:49763929-49763948 | Msa1107650:intron | 35.0% | |
| TACGATAGAATACCTCACAA+AGG | + | chr7_3:49763957-49763976 | Msa1107650:intron | 35.0% | |
| ! | GCAAAATTTTCATGAGGTAG+TGG | - | chr7_3:49764088-49764107 | None:intergenic | 35.0% |
| ! | CTACCTCATGAAAATTTTGC+AGG | + | chr7_3:49764088-49764107 | Msa1107650:intron | 35.0% |
| ! | ACCTCATGAAAATTTTGCAG+GGG | + | chr7_3:49764090-49764109 | Msa1107650:intron | 35.0% |
| ! | GGGTCTATTGTTAAGTGTTT+TGG | + | chr7_3:49764111-49764130 | Msa1107650:CDS | 35.0% |
| GTGTTCTCGATCACTATTTA+CGG | + | chr7_3:49764146-49764165 | Msa1107650:CDS | 35.0% | |
| GAGAAATGACTCAACATAAC+CGG | - | chr7_3:49764372-49764391 | None:intergenic | 35.0% | |
| ATACTACAGTACTACCAGTA+GGG | - | chr7_3:49764411-49764430 | None:intergenic | 35.0% | |
| AATACTACAGTACTACCAGT+AGG | - | chr7_3:49764412-49764431 | None:intergenic | 35.0% | |
| ATTGGAAAATCTGCAGAGTA+AGG | - | chr7_3:49764818-49764837 | None:intergenic | 35.0% | |
| !!! | TTCCAAGAAGCTTGGTTTTT+TGG | + | chr7_3:49764863-49764882 | Msa1107650:three_prime_UTR | 35.0% |
| !!! | TCCAAGAAGCTTGGTTTTTT+GGG | + | chr7_3:49764864-49764883 | Msa1107650:three_prime_UTR | 35.0% |
| ! | GGGAATTAAATCTGGTTTGT+AGG | + | chr7_3:49764885-49764904 | Msa1107650:three_prime_UTR | 35.0% |
| GGAGATTAAACACCTTAAAG+TGG | + | chr7_3:49765134-49765153 | Msa1107650:three_prime_UTR | 35.0% | |
| ! | AGAGATTAAAGGCCACTTTA+AGG | - | chr7_3:49765149-49765168 | None:intergenic | 35.0% |
| CCTTTAATCTCTCCAGAAAA+GGG | + | chr7_3:49765157-49765176 | Msa1107650:three_prime_UTR | 35.0% | |
| TTGTAACCAAGAGAAATGCT+AGG | + | chr7_3:49765204-49765223 | Msa1107650:three_prime_UTR | 35.0% | |
| TGTAACCAAGAGAAATGCTA+GGG | + | chr7_3:49765205-49765224 | Msa1107650:three_prime_UTR | 35.0% | |
| ! | TGTTATAGGAGTGTGTTAGA+GGG | - | chr7_3:49765236-49765255 | None:intergenic | 35.0% |
| ! | GTTTTGTGGAGAATCGTGTT+GGG | - | chr7_3:49758443-49758462 | None:intergenic | 40.0% |
| !! | AGTTTTGTGGAGAATCGTGT+TGG | - | chr7_3:49758444-49758463 | None:intergenic | 40.0% |
| ! | GAAGTTTTTCCGGAAACTCA+TGG | + | chr7_3:49758581-49758600 | Msa1107650:CDS | 40.0% |
| CTTCTATCAAATCCAGGAAG+AGG | - | chr7_3:49758806-49758825 | None:intergenic | 40.0% | |
| CTCTTCCTGGATTTGATAGA+AGG | + | chr7_3:49758804-49758823 | Msa1107650:CDS | 40.0% | |
| ! | TCATTCAATCATGGCCCTTT+TGG | - | chr7_3:49758942-49758961 | None:intergenic | 40.0% |
| ! | GTAGGAGAAATGTTTGCTAG+TGG | + | chr7_3:49758965-49758984 | Msa1107650:intron | 40.0% |
| GTCAGTGCTTCATAAGCAAT+GGG | - | chr7_3:49759060-49759079 | None:intergenic | 40.0% | |
| TGTCAGTGCTTCATAAGCAA+TGG | - | chr7_3:49759061-49759080 | None:intergenic | 40.0% | |
| ATACTCGAGCCCCATTATAT+GGG | + | chr7_3:49759393-49759412 | Msa1107650:intron | 40.0% | |
| ACAGCGCTTCTATTTGAACT+GGG | + | chr7_3:49759487-49759506 | Msa1107650:intron | 40.0% | |
| ! | TTTTACACCAGGAGACTGTT+TGG | - | chr7_3:49759733-49759752 | None:intergenic | 40.0% |
| TAGCTTCTGACAGATGAACT+TGG | + | chr7_3:49759828-49759847 | Msa1107650:intron | 40.0% | |
| GGGGTATACCTGCATAATAA+TGG | - | chr7_3:49759919-49759938 | None:intergenic | 40.0% | |
| ACAAACTCAGTGAACGAAAG+GGG | - | chr7_3:49759938-49759957 | None:intergenic | 40.0% | |
| !! | CTTGTTACTTTCAAGGCCAA+AGG | + | chr7_3:49759991-49760010 | Msa1107650:intron | 40.0% |
| TTACGGAAAGAAGGTTTGGA+TGG | + | chr7_3:49760243-49760262 | Msa1107650:CDS | 40.0% | |
| TACGGAAAGAAGGTTTGGAT+GGG | + | chr7_3:49760244-49760263 | Msa1107650:CDS | 40.0% | |
| TCATTTGTTCTTTCAGCTGG+TGG | + | chr7_3:49760399-49760418 | Msa1107650:intron | 40.0% | |
| GTGGTGCAATGACTATTACA+TGG | + | chr7_3:49760905-49760924 | Msa1107650:CDS | 40.0% | |
| AATGAAAAGACAGGTCACTG+AGG | - | chr7_3:49761108-49761127 | None:intergenic | 40.0% | |
| ! | AGTGACCTGTCTTTTCATTC+AGG | + | chr7_3:49761109-49761128 | Msa1107650:intron | 40.0% |
| AAACATCCAATGCGTGTCAT+CGG | - | chr7_3:49761295-49761314 | None:intergenic | 40.0% | |
| TATTTGCCTTCTTCAGGTCA+AGG | + | chr7_3:49761348-49761367 | Msa1107650:intron | 40.0% | |
| TAAGCTAGAGGCAACAGAAA+GGG | - | chr7_3:49761495-49761514 | None:intergenic | 40.0% | |
| TTAAGCTAGAGGCAACAGAA+AGG | - | chr7_3:49761496-49761515 | None:intergenic | 40.0% | |
| CATGTCTGGTATCTTGAGTT+TGG | + | chr7_3:49761536-49761555 | Msa1107650:intron | 40.0% | |
| GTATCTTGAGTTTGGCATGT+AGG | + | chr7_3:49761544-49761563 | Msa1107650:intron | 40.0% | |
| TATTCTAGCGTATGGTAGAC+AGG | - | chr7_3:49761771-49761790 | None:intergenic | 40.0% | |
| TAATATCTACTCCTTCGTCC+GGG | + | chr7_3:49761833-49761852 | Msa1107650:intron | 40.0% | |
| GATCTAAGGGTTAAAGGAGT+TGG | - | chr7_3:49761875-49761894 | None:intergenic | 40.0% | |
| !! | GCTCAACTGGTTTGATCTAA+GGG | - | chr7_3:49761888-49761907 | None:intergenic | 40.0% |
| CCTTATGTGCTTGCAGTATT+GGG | + | chr7_3:49762082-49762101 | Msa1107650:CDS | 40.0% | |
| TCTTCACCATAGTCACTATG+TGG | + | chr7_3:49762107-49762126 | Msa1107650:CDS | 40.0% | |
| CTTCACCATAGTCACTATGT+GGG | + | chr7_3:49762108-49762127 | Msa1107650:CDS | 40.0% | |
| TTGTAGTAACTGAAGGTTGC+AGG | + | chr7_3:49762134-49762153 | Msa1107650:CDS | 40.0% | |
| GATAACAAGGTTCAACTGTC+TGG | - | chr7_3:49762226-49762245 | None:intergenic | 40.0% | |
| !! | TTCTGACAAGTTGGTTCATG+AGG | + | chr7_3:49762315-49762334 | Msa1107650:intron | 40.0% |
| ! | ACAGAATCCACAGTTTTCTG+AGG | - | chr7_3:49762355-49762374 | None:intergenic | 40.0% |
| ! | TTTTGGCATCAGTACAGTCA+AGG | - | chr7_3:49762506-49762525 | None:intergenic | 40.0% |
| ! | CATGCCTCTCAATTTGAAAC+AGG | + | chr7_3:49762537-49762556 | Msa1107650:intron | 40.0% |
| GCAATCACCTATTACTGAAG+TGG | + | chr7_3:49762562-49762581 | Msa1107650:CDS | 40.0% | |
| TATGGCTCCACTTCAGTAAT+AGG | - | chr7_3:49762572-49762591 | None:intergenic | 40.0% | |
| CCGACAAAACTTGAATCATG+AGG | - | chr7_3:49762724-49762743 | None:intergenic | 40.0% | |
| AACAACATGTAACTGGCAAC+AGG | - | chr7_3:49762800-49762819 | None:intergenic | 40.0% | |
| ! | TTTGCTTGGGTCACCTTTTT+GGG | + | chr7_3:49762892-49762911 | Msa1107650:CDS | 40.0% |
| TTGAATCCTGACACTTCTGT+TGG | + | chr7_3:49762932-49762951 | Msa1107650:CDS | 40.0% | |
| TGAGACCATGGACTTGAATA+TGG | + | chr7_3:49763638-49763657 | Msa1107650:intron | 40.0% | |
| AGAATACCTCACAAAGGTTC+AGG | + | chr7_3:49763963-49763982 | Msa1107650:intron | 40.0% | |
| ! | CCTCATGAAAATTTTGCAGG+GGG | + | chr7_3:49764091-49764110 | Msa1107650:intron | 40.0% |
| ATCGAGAACACTTGAAGTAG+TGG | - | chr7_3:49764137-49764156 | None:intergenic | 40.0% | |
| TTAAATGGTCATACGCAGTC+AGG | + | chr7_3:49764269-49764288 | Msa1107650:intron | 40.0% | |
| !! | TTTGCTAGTATAGCGTTGAC+CGG | + | chr7_3:49764350-49764369 | Msa1107650:intron | 40.0% |
| GGGTGATGAAAACAGTAGAA+AGG | - | chr7_3:49764439-49764458 | None:intergenic | 40.0% | |
| !!! | GCCCTTGGTTTTATTTTTCC+AGG | + | chr7_3:49764662-49764681 | Msa1107650:intron | 40.0% |
| ! | GTTCAATAATGGAACCAACC+TGG | - | chr7_3:49764683-49764702 | None:intergenic | 40.0% |
| CAAGCATATAATGTGATGCC+AGG | + | chr7_3:49764717-49764736 | Msa1107650:CDS | 40.0% | |
| !! | TTCAAAGCATTGCTTAAGCC+TGG | - | chr7_3:49764738-49764757 | None:intergenic | 40.0% |
| !! | AGCAATGCTTTGAAACGCTA+TGG | + | chr7_3:49764744-49764763 | Msa1107650:CDS | 40.0% |
| GCAGCCCTGATCAATTATAT+TGG | - | chr7_3:49764836-49764855 | None:intergenic | 40.0% | |
| CCAAGCTTCTTGGAAATACT+AGG | - | chr7_3:49764858-49764877 | None:intergenic | 40.0% | |
| CCTAGTATTTCCAAGAAGCT+TGG | + | chr7_3:49764855-49764874 | Msa1107650:three_prime_UTR | 40.0% | |
| !!! | CCAAGAAGCTTGGTTTTTTG+GGG | + | chr7_3:49764865-49764884 | Msa1107650:three_prime_UTR | 40.0% |
| GCCTTTAATCTCTCCAGAAA+AGG | + | chr7_3:49765156-49765175 | Msa1107650:three_prime_UTR | 40.0% | |
| !! | CCCTTTTCTGGAGAGATTAA+AGG | - | chr7_3:49765160-49765179 | None:intergenic | 40.0% |
| ATTACTAATGCCTACCACCA+AGG | - | chr7_3:49765183-49765202 | None:intergenic | 40.0% | |
| ! | GTGTTATAGGAGTGTGTTAG+AGG | - | chr7_3:49765237-49765256 | None:intergenic | 40.0% |
| !! | GTTTGGGTTGGAAATTGTGG+GGG | - | chr7_3:49758421-49758440 | None:intergenic | 45.0% |
| !! | GGTTTGGGTTGGAAATTGTG+GGG | - | chr7_3:49758422-49758441 | None:intergenic | 45.0% |
| !! | GGGTTTGGGTTGGAAATTGT+GGG | - | chr7_3:49758423-49758442 | None:intergenic | 45.0% |
| !! | TGGGTTTGGGTTGGAAATTG+TGG | - | chr7_3:49758424-49758443 | None:intergenic | 45.0% |
| TGGAGAATCGTGTTGGGTTT+GGG | - | chr7_3:49758437-49758456 | None:intergenic | 45.0% | |
| GAAATTCTGCAGTGAAGCGA+AGG | - | chr7_3:49758494-49758513 | None:intergenic | 45.0% | |
| CTTAATGTGCGGCGTATGAT+TGG | - | chr7_3:49758543-49758562 | None:intergenic | 45.0% | |
| AAGAGCGGAGTCTTAATGTG+CGG | - | chr7_3:49758554-49758573 | None:intergenic | 45.0% | |
| ! | CGAAGCAATTGTTGCTTCTC+CGG | + | chr7_3:49758613-49758632 | Msa1107650:CDS | 45.0% |
| ! | GAAGCAATTGTTGCTTCTCC+GGG | + | chr7_3:49758614-49758633 | Msa1107650:CDS | 45.0% |
| CATACTCGAGCCCCATTATA+TGG | + | chr7_3:49759392-49759411 | Msa1107650:intron | 45.0% | |
| TACTCGAGCCCCATTATATG+GGG | + | chr7_3:49759394-49759413 | Msa1107650:intron | 45.0% | |
| GACAGCGCTTCTATTTGAAC+TGG | + | chr7_3:49759486-49759505 | Msa1107650:intron | 45.0% | |
| TATTTGAACTGGGCCCTGTT+TGG | + | chr7_3:49759497-49759516 | Msa1107650:intron | 45.0% | |
| AGTTCTTCCAAACAGTCTCC+TGG | + | chr7_3:49759723-49759742 | Msa1107650:intron | 45.0% | |
| ! | AAGCTGTCTCTTTTCCAGCT+TGG | + | chr7_3:49759870-49759889 | Msa1107650:CDS | 45.0% |
| GTCACTGGGCTTTGCAATTA+TGG | + | chr7_3:49760424-49760443 | Msa1107650:CDS | 45.0% | |
| ! | TTTGATAGCATAAGCCGGGA+AGG | + | chr7_3:49760584-49760603 | Msa1107650:intron | 45.0% |
| AGCCGGGAAGGTTAAAAAGA+TGG | + | chr7_3:49760596-49760615 | Msa1107650:intron | 45.0% | |
| TAATCCCGGCAGATGTATCT+AGG | + | chr7_3:49760633-49760652 | Msa1107650:intron | 45.0% | |
| GATGAACCTTGACCTGAAGA+AGG | - | chr7_3:49761357-49761376 | None:intergenic | 45.0% | |
| GTTAAAGGAGTTGGAAGTCC+TGG | - | chr7_3:49761866-49761885 | None:intergenic | 45.0% | |
| !! | GGCTCAACTGGTTTGATCTA+AGG | - | chr7_3:49761889-49761908 | None:intergenic | 45.0% |
| ! | TTGCAGTGAGTGCTGTTAGT+TGG | + | chr7_3:49762056-49762075 | Msa1107650:intron | 45.0% |
| GCCTTATGTGCTTGCAGTAT+TGG | + | chr7_3:49762081-49762100 | Msa1107650:CDS | 45.0% | |
| CCCAATACTGCAAGCACATA+AGG | - | chr7_3:49762085-49762104 | None:intergenic | 45.0% | |
| AACTGCCCACATAGTGACTA+TGG | - | chr7_3:49762116-49762135 | None:intergenic | 45.0% | |
| TGGGCAGTTGTAGTAACTGA+AGG | + | chr7_3:49762127-49762146 | Msa1107650:CDS | 45.0% | |
| ! | TCAAACTTGCTTCTGCTGCA+AGG | + | chr7_3:49762182-49762201 | Msa1107650:CDS | 45.0% |
| GCTCCCTGTTTCAAATTGAG+AGG | - | chr7_3:49762544-49762563 | None:intergenic | 45.0% | |
| ! | GATAGAGTGCTAGCATGCTA+TGG | - | chr7_3:49762749-49762768 | None:intergenic | 45.0% |
| ! | GTTTGCTTGGGTCACCTTTT+TGG | + | chr7_3:49762891-49762910 | Msa1107650:intron | 45.0% |
| !! | ACCTTTTTGGGAGCATGTGA+AGG | + | chr7_3:49762904-49762923 | Msa1107650:CDS | 45.0% |
| TCCTTCACATGCTCCCAAAA+AGG | - | chr7_3:49762908-49762927 | None:intergenic | 45.0% | |
| AATTCGTCTGAAAAGGGCTC+CGG | + | chr7_3:49763168-49763187 | Msa1107650:intron | 45.0% | |
| TAATGCTAACCTGTGCCCTT+GGG | + | chr7_3:49763438-49763457 | Msa1107650:intron | 45.0% | |
| ! | TTCACAGGCTAACTTGCCAA+AGG | + | chr7_3:49763873-49763892 | Msa1107650:intron | 45.0% |
| ACCAAATATTAAGCCCGGGA+AGG | + | chr7_3:49763933-49763952 | Msa1107650:intron | 45.0% | |
| TATTCTATCGTAGCCTTCCC+GGG | - | chr7_3:49763949-49763968 | None:intergenic | 45.0% | |
| GTATTCTATCGTAGCCTTCC+CGG | - | chr7_3:49763950-49763969 | None:intergenic | 45.0% | |
| !!! | GCGATTTTGGGGTCTGTTAT+GGG | + | chr7_3:49763993-49764012 | Msa1107650:intron | 45.0% |
| GTGGATGACCATCACATAAC+AGG | - | chr7_3:49764069-49764088 | None:intergenic | 45.0% | |
| ! | CCCCCTGCAAAATTTTCATG+AGG | - | chr7_3:49764094-49764113 | None:intergenic | 45.0% |
| TATTTACGGCGTACCAATGC+TGG | + | chr7_3:49764160-49764179 | Msa1107650:CDS | 45.0% | |
| ACCAATGCTGGATTTGCCAT+TGG | + | chr7_3:49764172-49764191 | Msa1107650:CDS | 45.0% | |
| ACCAATGGCAAATCCAGCAT+TGG | - | chr7_3:49764176-49764195 | None:intergenic | 45.0% | |
| TCATGCCAGCTGCATTTATC+TGG | + | chr7_3:49764300-49764319 | Msa1107650:intron | 45.0% | |
| CGAAAGCAGGAATGATAGCA+TGG | - | chr7_3:49764788-49764807 | None:intergenic | 45.0% | |
| CCCCAAAAAACCAAGCTTCT+TGG | - | chr7_3:49764868-49764887 | None:intergenic | 45.0% | |
| GAATCGTGTTGGGTTTGGGT+TGG | - | chr7_3:49758433-49758452 | None:intergenic | 50.0% | |
| GTGGAGAATCGTGTTGGGTT+TGG | - | chr7_3:49758438-49758457 | None:intergenic | 50.0% | |
| GAGTCGGTCGGAGAAGTTAA+CGG | - | chr7_3:49758516-49758535 | None:intergenic | 50.0% | |
| !! | ATGATTGGTTCGGAGTCGGT+CGG | - | chr7_3:49758528-49758547 | None:intergenic | 50.0% |
| !! | GCGTATGATTGGTTCGGAGT+CGG | - | chr7_3:49758532-49758551 | None:intergenic | 50.0% |
| ! | TGTGCGGCGTATGATTGGTT+CGG | - | chr7_3:49758538-49758557 | None:intergenic | 50.0% |
| CCATCGCTACCATGAGTTTC+CGG | - | chr7_3:49758593-49758612 | None:intergenic | 50.0% | |
| GGTTTCAACTCTACGGTTCC+CGG | - | chr7_3:49758635-49758654 | None:intergenic | 50.0% | |
| GTGTCTGACACCAACACGTA+TGG | - | chr7_3:49759155-49759174 | None:intergenic | 50.0% | |
| AAGAGACAGCTTCAGCTCAG+AGG | - | chr7_3:49759862-49759881 | None:intergenic | 50.0% | |
| TCTGAGGACTGTTTCCAAGC+TGG | - | chr7_3:49759887-49759906 | None:intergenic | 50.0% | |
| ! | TTTCAGCTGGTGGATGTCAC+TGG | + | chr7_3:49760409-49760428 | Msa1107650:intron | 50.0% |
| ! | TTCAGCTGGTGGATGTCACT+GGG | + | chr7_3:49760410-49760429 | Msa1107650:intron | 50.0% |
| ACTGCCTAGATACATCTGCC+GGG | - | chr7_3:49760640-49760659 | None:intergenic | 50.0% | |
| GACTGCCTAGATACATCTGC+CGG | - | chr7_3:49760641-49760660 | None:intergenic | 50.0% | |
| GTCACTGAGGAACTTCTGCA+TGG | - | chr7_3:49761095-49761114 | None:intergenic | 50.0% | |
| ! | CAGTGAGTGCTGTTAGTTGG+TGG | + | chr7_3:49762059-49762078 | Msa1107650:intron | 50.0% |
| AGGTACGAGGTGGTCAAAAC+AGG | - | chr7_3:49762629-49762648 | None:intergenic | 50.0% | |
| TTTGACCACCTCGTACCTCT+TGG | + | chr7_3:49762631-49762650 | Msa1107650:CDS | 50.0% | |
| !! | TCAGCACCAACAGAAGTGTC+AGG | - | chr7_3:49762941-49762960 | None:intergenic | 50.0% |
| !! | TTCTGTTGGTGCTGAACCGT+GGG | + | chr7_3:49762946-49762965 | Msa1107650:CDS | 50.0% |
| GTAATGCTAACCTGTGCCCT+TGG | + | chr7_3:49763437-49763456 | Msa1107650:intron | 50.0% | |
| AATGCTAACCTGTGCCCTTG+GGG | + | chr7_3:49763439-49763458 | Msa1107650:intron | 50.0% | |
| ! | AACATATACCCCAAGGGCAC+AGG | - | chr7_3:49763450-49763469 | None:intergenic | 50.0% |
| GCCTTCCCGGGCTTAATATT+TGG | - | chr7_3:49763937-49763956 | None:intergenic | 50.0% | |
| TGGAAGCCTGAACCTTTGTG+AGG | - | chr7_3:49763972-49763991 | None:intergenic | 50.0% | |
| ! | TTCAGGCTTCCACGCGATTT+TGG | + | chr7_3:49763980-49763999 | Msa1107650:intron | 50.0% |
| ! | TCAGGCTTCCACGCGATTTT+GGG | + | chr7_3:49763981-49764000 | Msa1107650:intron | 50.0% |
| TAACAGACCCCAAAATCGCG+TGG | - | chr7_3:49763992-49764011 | None:intergenic | 50.0% | |
| !!! | CGCGATTTTGGGGTCTGTTA+TGG | + | chr7_3:49763992-49764011 | Msa1107650:intron | 50.0% |
| GCAAGCCAGATAAATGCAGC+TGG | - | chr7_3:49764308-49764327 | None:intergenic | 50.0% | |
| CAGTACTACCAGTAGGGTAC+TGG | - | chr7_3:49764405-49764424 | None:intergenic | 50.0% | |
| GTAAGGATGCTGACGAAAGC+AGG | - | chr7_3:49764801-49764820 | None:intergenic | 50.0% | |
| ATCTCTCCAGAAAAGGGCCT+TGG | + | chr7_3:49765163-49765182 | Msa1107650:three_prime_UTR | 50.0% | |
| TGCGACCCTAGCATTTCTCT+TGG | - | chr7_3:49765213-49765232 | None:intergenic | 50.0% | |
| GTTGCAGTTGCTTCCATGGC+TGG | - | chr7_3:49758371-49758390 | None:intergenic | 55.0% | |
| TCGCGTTGCAGTTGCTTCCA+TGG | - | chr7_3:49758375-49758394 | None:intergenic | 55.0% | |
| GGGGTGGAAGTGATAGAAGG+AGG | - | chr7_3:49758402-49758421 | None:intergenic | 55.0% | |
| GTGGGGGTGGAAGTGATAGA+AGG | - | chr7_3:49758405-49758424 | None:intergenic | 55.0% | |
| ! | TGGGTTGGAAATTGTGGGGG+TGG | - | chr7_3:49758418-49758437 | None:intergenic | 55.0% |
| ! | CCGGAAACTCATGGTAGCGA+TGG | + | chr7_3:49758590-49758609 | Msa1107650:CDS | 55.0% |
| GACACACCGATGACACGCAT+TGG | + | chr7_3:49761286-49761305 | Msa1107650:intron | 55.0% | |
| GCTAGAGGCAACAGAAAGGG+AGG | - | chr7_3:49761492-49761511 | None:intergenic | 55.0% | |
| GGAAGTCCTGGCTTCAAACC+CGG | - | chr7_3:49761854-49761873 | None:intergenic | 55.0% | |
| AAAACAGGCTGCATCCCTGC+TGG | - | chr7_3:49762614-49762633 | None:intergenic | 55.0% | |
| ! | AAAGGCCAAGAGGTACGAGG+TGG | - | chr7_3:49762639-49762658 | None:intergenic | 55.0% |
| ! | TGGAAAGGCCAAGAGGTACG+AGG | - | chr7_3:49762642-49762661 | None:intergenic | 55.0% |
| CGATGCTTGGAAAGGCCAAG+AGG | - | chr7_3:49762649-49762668 | None:intergenic | 55.0% | |
| ! | CCTTTCCAAGCATCGTCGCT+GGG | + | chr7_3:49762654-49762673 | Msa1107650:CDS | 55.0% |
| ACATACCCAGCGACGATGCT+TGG | - | chr7_3:49762662-49762681 | None:intergenic | 55.0% | |
| !! | CTTCTGTTGGTGCTGAACCG+TGG | + | chr7_3:49762945-49762964 | Msa1107650:CDS | 55.0% |
| ! | CAGGCTTCCACGCGATTTTG+GGG | + | chr7_3:49763982-49764001 | Msa1107650:intron | 55.0% |
| CAGTTTCACTGAGCAGCCCT+TGG | + | chr7_3:49764647-49764666 | Msa1107650:intron | 55.0% | |
| TCTCCAGAAAAGGGCCTTGG+TGG | + | chr7_3:49765166-49765185 | Msa1107650:three_prime_UTR | 55.0% | |
| ! | CTACCACCAAGGCCCTTTTC+TGG | - | chr7_3:49765172-49765191 | None:intergenic | 55.0% |
| ! | CAGAAAAGGGCCTTGGTGGT+AGG | + | chr7_3:49765170-49765189 | Msa1107650:three_prime_UTR | 55.0% |
| ACTGCTGCGAAGTCCAGCCA+TGG | + | chr7_3:49758355-49758374 | Msa1107650:exon | 60.0% | |
| CTGGCTTCAAACCCGGACGA+AGG | - | chr7_3:49761847-49761866 | None:intergenic | 60.0% | |
| ! | CTTCGTCCGGGTTTGAAGCC+AGG | + | chr7_3:49761845-49761864 | Msa1107650:intron | 60.0% |
| TGCGTGTGTGTGTGTGGTGG+GGG | - | chr7_3:49761928-49761947 | None:intergenic | 60.0% | |
| GTGCGTGTGTGTGTGTGGTG+GGG | - | chr7_3:49761929-49761948 | None:intergenic | 60.0% | |
| CGTGCGTGTGTGTGTGTGGT+GGG | - | chr7_3:49761930-49761949 | None:intergenic | 60.0% | |
| ! | GCCTTTCCAAGCATCGTCGC+TGG | + | chr7_3:49762653-49762672 | Msa1107650:CDS | 60.0% |
| CCCAGCGACGATGCTTGGAA+AGG | - | chr7_3:49762657-49762676 | None:intergenic | 60.0% | |
| GCATCTCGCCAGTACCCTAC+TGG | + | chr7_3:49764394-49764413 | Msa1107650:intron | 60.0% | |
| ! | TGTGTGTGTGTGGTGGGGGG+GGG | - | chr7_3:49761924-49761943 | None:intergenic | 65.0% |
| ! | GTGTGTGTGTGTGGTGGGGG+GGG | - | chr7_3:49761925-49761944 | None:intergenic | 65.0% |
| ! | CGTGTGTGTGTGTGGTGGGG+GGG | - | chr7_3:49761926-49761945 | None:intergenic | 65.0% |
| ! | GCGTGTGTGTGTGTGGTGGG+GGG | - | chr7_3:49761927-49761946 | None:intergenic | 65.0% |
| GCGTGCGTGTGTGTGTGTGG+TGG | - | chr7_3:49761931-49761950 | None:intergenic | 65.0% | |
| GGTGCGTGCGTGTGTGTGTG+TGG | - | chr7_3:49761934-49761953 | None:intergenic | 65.0% | |
| ! | TGTGTGTGTGGTGGGGGGGG+GGG | - | chr7_3:49761922-49761941 | None:intergenic | 70.0% |
| ! | GTGTGTGTGTGGTGGGGGGG+GGG | - | chr7_3:49761923-49761942 | None:intergenic | 70.0% |
| ! | TGTGTGTGGTGGGGGGGGGG+GGG | - | chr7_3:49761920-49761939 | None:intergenic | 75.0% |
| ! | GTGTGTGTGGTGGGGGGGGG+GGG | - | chr7_3:49761921-49761940 | None:intergenic | 75.0% |
| !! | TGTGTGGTGGGGGGGGGGGG+GGG | - | chr7_3:49761918-49761937 | None:intergenic | 80.0% |
| !! | GTGTGTGGTGGGGGGGGGGG+GGG | - | chr7_3:49761919-49761938 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGGGCTCAAC+TGG | - | chr7_3:49761901-49761920 | None:intergenic | 85.0% |
| !! | TGTGGTGGGGGGGGGGGGGG+GGG | - | chr7_3:49761916-49761935 | None:intergenic | 85.0% |
| !! | GTGTGGTGGGGGGGGGGGGG+GGG | - | chr7_3:49761917-49761936 | None:intergenic | 85.0% |
| ! | TGGTGGGGGGGGGGGGGGGG+GGG | - | chr7_3:49761914-49761933 | None:intergenic | 90.0% |
| !! | GTGGTGGGGGGGGGGGGGGG+GGG | - | chr7_3:49761915-49761934 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:49761911-49761930 | None:intergenic | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:49761912-49761931 | None:intergenic | 95.0% |
| ! | GGTGGGGGGGGGGGGGGGGG+GGG | - | chr7_3:49761913-49761932 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 49758300 | 49765263 | 49758300 | ID=Msa1107650;Name=Msa1107650 |
| chr7_3 | mRNA | 49758300 | 49765263 | 49758300 | ID=Msa1107650-mRNA-1;Parent=Msa1107650;Name=Msa1107650-mRNA-1;_AED=0.07;_eAED=0.07;_QI=74|0.9|0.90|1|0.9|0.90|11|490|507 |
| chr7_3 | exon | 49758300 | 49758872 | 49758300 | ID=Msa1107650-mRNA-1:exon:10067;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49759841 | 49759929 | 49759841 | ID=Msa1107650-mRNA-1:exon:10068;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49760210 | 49760289 | 49760210 | ID=Msa1107650-mRNA-1:exon:10069;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49760415 | 49760504 | 49760415 | ID=Msa1107650-mRNA-1:exon:10070;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49760867 | 49760958 | 49760867 | ID=Msa1107650-mRNA-1:exon:10071;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49761364 | 49761447 | 49761364 | ID=Msa1107650-mRNA-1:exon:10072;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49762062 | 49762203 | 49762062 | ID=Msa1107650-mRNA-1:exon:10073;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49762559 | 49762675 | 49762559 | ID=Msa1107650-mRNA-1:exon:10074;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49762892 | 49763025 | 49762892 | ID=Msa1107650-mRNA-1:exon:10075;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49764110 | 49764216 | 49764110 | ID=Msa1107650-mRNA-1:exon:10076;Parent=Msa1107650-mRNA-1 |
| chr7_3 | exon | 49764684 | 49765263 | 49764684 | ID=Msa1107650-mRNA-1:exon:10077;Parent=Msa1107650-mRNA-1 |
| chr7_3 | five_prime_UTR | 49758300 | 49758373 | 49758300 | ID=Msa1107650-mRNA-1:five_prime_utr;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49758374 | 49758872 | 49758374 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49759841 | 49759929 | 49759841 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49760210 | 49760289 | 49760210 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49760415 | 49760504 | 49760415 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49760867 | 49760958 | 49760867 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49761364 | 49761447 | 49761364 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49762062 | 49762203 | 49762062 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49762559 | 49762675 | 49762559 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49762892 | 49763025 | 49762892 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49764110 | 49764216 | 49764110 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | CDS | 49764684 | 49764773 | 49764684 | ID=Msa1107650-mRNA-1:cds;Parent=Msa1107650-mRNA-1 |
| chr7_3 | three_prime_UTR | 49764774 | 49765263 | 49764774 | ID=Msa1107650-mRNA-1:three_prime_utr;Parent=Msa1107650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
