Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075940 | XP_013449721.1 | 90.128 | 547 | 14 | 1 | 1 | 507 | 1 | 547 | 0.0 | 997 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075940 | sp|F4IQV7|SCY2_ARATH | 65.949 | 511 | 125 | 5 | 43 | 507 | 68 | 575 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075940 | A0A072U218 | 90.128 | 547 | 14 | 1 | 1 | 507 | 1 | 547 | 0.0 | 997 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa1075940 | 0.802639 | 5.099508e-49 | -8.615850e-47 |
| Msa0051100 | Msa1075940 | 0.808461 | 3.062122e-50 | -8.615850e-47 |
| Msa0061600 | Msa1075940 | -0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa0106120 | Msa1075940 | -0.811485 | 6.839151e-51 | -8.615850e-47 |
| Msa0628100 | Msa1075940 | 0.810106 | 1.359321e-50 | -8.615850e-47 |
| Msa0714600 | Msa1075940 | 0.820608 | 6.269406e-53 | -8.615850e-47 |
| Msa0722930 | Msa1075940 | 0.818133 | 2.297739e-52 | -8.615850e-47 |
| Msa0723140 | Msa1075940 | 0.829857 | 4.069688e-55 | -8.615850e-47 |
| Msa0750380 | Msa1075940 | 0.808627 | 2.822611e-50 | -8.615850e-47 |
| Msa0811000 | Msa1075940 | 0.800997 | 1.108255e-48 | -8.615850e-47 |
| Msa0828570 | Msa1075940 | 0.806243 | 9.043910e-50 | -8.615850e-47 |
| Msa0830720 | Msa1075940 | 0.803692 | 3.087084e-49 | -8.615850e-47 |
| Msa0152740 | Msa1075940 | -0.815644 | 8.316118e-52 | -8.615850e-47 |
| Msa0159750 | Msa1075940 | 0.802161 | 6.396754e-49 | -8.615850e-47 |
| Msa0164360 | Msa1075940 | 0.801389 | 9.215878e-49 | -8.615850e-47 |
| Msa0198440 | Msa1075940 | 0.807020 | 6.198734e-50 | -8.615850e-47 |
| Msa0411000 | Msa1075940 | 0.808416 | 3.131362e-50 | -8.615850e-47 |
| Msa0455230 | Msa1075940 | 0.805979 | 1.027417e-49 | -8.615850e-47 |
| Msa0988500 | Msa1075940 | 0.810658 | 1.033257e-50 | -8.615850e-47 |
| Msa1040730 | Msa1075940 | -0.803765 | 2.981516e-49 | -8.615850e-47 |
| Msa1072350 | Msa1075940 | 0.806056 | 9.899073e-50 | -8.615850e-47 |
| Msa1075940 | Msa1107650 | 0.903800 | 2.384144e-79 | -8.615850e-47 |
| Msa1075940 | Msa1130650 | 0.820728 | 5.885064e-53 | -8.615850e-47 |
| Msa1075940 | Msa1130730 | 0.808285 | 3.337966e-50 | -8.615850e-47 |
| Msa1075940 | Msa1207480 | -0.809075 | 2.263966e-50 | -8.615850e-47 |
| Msa1075940 | Msa1216600 | -0.816963 | 4.217622e-52 | -8.615850e-47 |
| Msa1075940 | Msa1222030 | -0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa1075940 | Msa1237260 | 0.814915 | 1.208087e-51 | -8.615850e-47 |
| Msa1075940 | Msa1287160 | 0.824960 | 6.081820e-54 | -8.615850e-47 |
| Msa1075940 | Msa1287340 | 0.819427 | 1.168304e-52 | -8.615850e-47 |
| Msa1075940 | Msa1323160 | -0.801826 | 7.496090e-49 | -8.615850e-47 |
| Msa1075940 | Msa1335970 | -0.805570 | 1.252397e-49 | -8.615850e-47 |
| Msa1075940 | Msa1347290 | 0.803921 | 2.766885e-49 | -8.615850e-47 |
| Msa1075940 | Msa1428440 | 0.820898 | 5.377693e-53 | -8.615850e-47 |
| Msa1075940 | Msa1460310 | -0.806923 | 6.498559e-50 | -8.615850e-47 |
| Msa0242700 | Msa1075940 | -0.806122 | 9.589735e-50 | -8.615850e-47 |
| Msa0264940 | Msa1075940 | -0.804962 | 1.679381e-49 | -8.615850e-47 |
| Msa0278670 | Msa1075940 | 0.810251 | 1.264581e-50 | -8.615850e-47 |
| Msa0302990 | Msa1075940 | -0.807160 | 5.790421e-50 | -8.615850e-47 |
| Msa0363460 | Msa1075940 | 0.802459 | 5.553828e-49 | -8.615850e-47 |
| Msa0511720 | Msa1075940 | -0.804007 | 2.655789e-49 | -8.615850e-47 |
| Msa0530950 | Msa1075940 | 0.819089 | 1.394968e-52 | -8.615850e-47 |
| Msa0563140 | Msa1075940 | 0.805229 | 1.476510e-49 | -8.615850e-47 |
| Msa0577230 | Msa1075940 | 0.801098 | 1.057003e-48 | -8.615850e-47 |
| Msa0600820 | Msa1075940 | 0.815940 | 7.145473e-52 | -8.615850e-47 |
| Msa0601920 | Msa1075940 | -0.807937 | 3.960722e-50 | -8.615850e-47 |
| Msa0843280 | Msa1075940 | 0.812407 | 4.305212e-51 | -8.615850e-47 |
| Msa0950410 | Msa1075940 | 0.802365 | 5.806794e-49 | -8.615850e-47 |
| Msa0951720 | Msa1075940 | 0.831476 | 1.633442e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075940 | MtrunA17_Chr7g0259761 | 90.128 | 547 | 14 | 1 | 1 | 507 | 1 | 547 | 0.0 | 997 |
| Msa1075940 | MtrunA17_Chr2g0305781 | 27.723 | 303 | 203 | 7 | 118 | 417 | 130 | 419 | 2.71e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075940 | AT2G31530.1 | 65.949 | 511 | 125 | 5 | 43 | 507 | 68 | 575 | 0.0 | 665 |
| Msa1075940 | AT2G18710.1 | 28.713 | 303 | 200 | 7 | 118 | 417 | 133 | 422 | 1.63e-22 | 101 |
Find 142 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACTGGGCTTTGCAATTA+TGG | 0.151252 | 7_2:-74344210 | Msa1075940:CDS |
| GATTATATGAGCTTTGTTTC+TGG | 0.226385 | 7_2:-74345780 | Msa1075940:CDS |
| AGGTGAATTTCTTGTGAAAA+TGG | 0.231056 | 7_2:+74346148 | None:intergenic |
| TTTCAGCTGGTGGATGTCAC+TGG | 0.231362 | 7_2:-74344225 | Msa1075940:intron |
| CTCTTCCTGGATTTGATAGA+AGG | 0.272274 | 7_2:-74345815 | Msa1075940:CDS |
| GGGTCTATTGTTAAGTGTTT+TGG | 0.277974 | 7_2:-74340541 | Msa1075940:CDS |
| AACCTATTCTTGAACATTCT+AGG | 0.278697 | 7_2:+74345966 | None:intergenic |
| TATGGACACATTACACAAAA+TGG | 0.280313 | 7_2:-74343223 | Msa1075940:CDS |
| GGGAATTAAATCTGGTTTGT+AGG | 0.283145 | 7_2:-74339767 | Msa1075940:three_prime_UTR |
| AGAGATTAAAGGCCACTTTA+AGG | 0.285592 | 7_2:+74339506 | None:intergenic |
| CAATTTATGCTGCTAGTTAC+AGG | 0.287034 | 7_2:-74344151 | Msa1075940:intron |
| CCTTATGTGCTTGCAGTATT+GGG | 0.288214 | 7_2:-74342569 | Msa1075940:CDS |
| CCATCGCTACCATGAGTTTC+CGG | 0.288886 | 7_2:+74346029 | None:intergenic |
| ATATTATTGGAGTGTGTTAT+AGG | 0.291038 | 7_2:+74339405 | None:intergenic |
| TCCTTCACATGCTCCCAAAA+AGG | 0.297381 | 7_2:+74341747 | None:intergenic |
| TATGGCTCCACTTCAGTAAT+AGG | 0.301136 | 7_2:+74342083 | None:intergenic |
| TTTATATTGAAAGGAATATA+TGG | 0.309189 | 7_2:+74342065 | None:intergenic |
| GTGGAGAATCGTGTTGGGTT+TGG | 0.313946 | 7_2:+74346184 | None:intergenic |
| GAAGACAAAGAAGGCATATA+TGG | 0.314431 | 7_2:+74341674 | None:intergenic |
| GGGTTTGGGTTGGAAATTGT+GGG | 0.321547 | 7_2:+74346199 | None:intergenic |
| CGATCTTCTAAGTTCAATAA+TGG | 0.330086 | 7_2:+74339961 | None:intergenic |
| TGGAGAATCGTGTTGGGTTT+GGG | 0.334662 | 7_2:+74346185 | None:intergenic |
| CTATTAATTGGCAGTTTGCT+TGG | 0.335480 | 7_2:-74341774 | Msa1075940:intron |
| TTGTAGGTTCAAACATGTTA+TGG | 0.335853 | 7_2:-74343772 | Msa1075940:intron |
| ATATGTGTTGGAATACTGAT+AGG | 0.336285 | 7_2:-74343249 | Msa1075940:CDS |
| GCCTTATGTGCTTGCAGTAT+TGG | 0.336942 | 7_2:-74342570 | Msa1075940:CDS |
| TTTCTGAATTTCGTGCGTTT+TGG | 0.343082 | 7_2:-74345945 | Msa1075940:CDS |
| AAAGTAAAGCTTCAGTACTA+TGG | 0.343796 | 7_2:-74342494 | Msa1075940:CDS |
| CGAAGCAATTGTTGCTTCTC+CGG | 0.345942 | 7_2:-74346006 | Msa1075940:CDS |
| ACAAAGCTCATATAATCTTT+AGG | 0.351174 | 7_2:+74345786 | None:intergenic |
| AGATTACTAGCAATGCTTAA+TGG | 0.357115 | 7_2:+74339727 | None:intergenic |
| GTTGCAGTTGCTTCCATGGC+TGG | 0.361529 | 7_2:+74346251 | None:intergenic |
| GGTTTCAACTCTACGGTTCC+CGG | 0.365609 | 7_2:+74345987 | None:intergenic |
| TGGGTTTGGGTTGGAAATTG+TGG | 0.366282 | 7_2:+74346198 | None:intergenic |
| GTGTTCTCGATCACTATTTA+CGG | 0.373895 | 7_2:-74340506 | Msa1075940:CDS |
| GCAGCCCTGATCAATTATAT+TGG | 0.375075 | 7_2:+74339819 | None:intergenic |
| GTGTTATAGGAGTGTGTTAG+AGG | 0.375321 | 7_2:+74339418 | None:intergenic |
| GCCTTTCCAAGCATCGTCGC+TGG | 0.375388 | 7_2:-74341999 | Msa1075940:CDS |
| TGGAATACTGATAGGGTATA+TGG | 0.386400 | 7_2:-74343241 | Msa1075940:CDS |
| ACCATATCAGAATCTGGATT+TGG | 0.388043 | 7_2:-74343696 | Msa1075940:intron |
| AAAATGGTAACTCAACTTTC+AGG | 0.389765 | 7_2:-74343207 | Msa1075940:intron |
| TTTGTTTCTGGTTCTTCTGT+TGG | 0.390133 | 7_2:-74345768 | Msa1075940:intron |
| TATTAATTGGCAGTTTGCTT+GGG | 0.396305 | 7_2:-74341773 | Msa1075940:intron |
| ACCAAATCCAGATTCTGATA+TGG | 0.401944 | 7_2:+74343695 | None:intergenic |
| TTCAGCTGGTGGATGTCACT+GGG | 0.402539 | 7_2:-74344224 | Msa1075940:intron |
| TTGTAGTAACTGAAGGTTGC+AGG | 0.404580 | 7_2:-74342517 | Msa1075940:CDS |
| GCCTTTAATCTCTCCAGAAA+AGG | 0.405249 | 7_2:-74339496 | Msa1075940:three_prime_UTR |
| AACTGCCCACATAGTGACTA+TGG | 0.405691 | 7_2:+74342538 | None:intergenic |
| TTCCTTCTCTAGTAAAGTTA+CGG | 0.406548 | 7_2:-74344408 | Msa1075940:CDS |
| CTAGCAGCATAAATTGAGTA+TGG | 0.406774 | 7_2:+74344158 | None:intergenic |
| AAAGTTACGGAAAGAAGGTT+TGG | 0.410003 | 7_2:-74344395 | Msa1075940:CDS |
| AACCTAGAATGTTCAAGAAT+AGG | 0.412141 | 7_2:-74345968 | Msa1075940:CDS |
| CTTAATGTGCGGCGTATGAT+TGG | 0.412667 | 7_2:+74346079 | None:intergenic |
| CCCAATACTGCAAGCACATA+AGG | 0.415294 | 7_2:+74342569 | None:intergenic |
| ATTAAGCATTGCTAGTAATC+TGG | 0.415917 | 7_2:-74339725 | Msa1075940:three_prime_UTR |
| ATCTCTCCAGAAAAGGGCCT+TGG | 0.418670 | 7_2:-74339489 | Msa1075940:three_prime_UTR |
| ACAACTTTGTTGTTGGTTTG+TGG | 0.426570 | 7_2:-74343747 | Msa1075940:CDS |
| CTAGTAAAGTTACGGAAAGA+AGG | 0.428652 | 7_2:-74344400 | Msa1075940:CDS |
| TGTGATACCATATCAGAATC+TGG | 0.430533 | 7_2:-74343702 | Msa1075940:CDS |
| AGGTACGAGGTGGTCAAAAC+AGG | 0.437157 | 7_2:+74342026 | None:intergenic |
| TATTTACGGCGTACCAATGC+TGG | 0.440144 | 7_2:-74340492 | Msa1075940:CDS |
| GGGGTATACCTGCATAATAA+TGG | 0.440332 | 7_2:+74344715 | None:intergenic |
| TTCAAAGCATTGCTTAAGCC+TGG | 0.444069 | 7_2:+74339917 | None:intergenic |
| CCAAGCTTCTTGGAAATACT+AGG | 0.454747 | 7_2:+74339797 | None:intergenic |
| GAGTCGGTCGGAGAAGTTAA+CGG | 0.456852 | 7_2:+74346106 | None:intergenic |
| TATGGTGACAACTTTGTTGT+TGG | 0.460090 | 7_2:-74343754 | Msa1075940:CDS |
| TTTGACCACCTCGTACCTCT+TGG | 0.461703 | 7_2:-74342021 | Msa1075940:CDS |
| TTCCGTAACTTTACTAGAGA+AGG | 0.462081 | 7_2:+74344406 | None:intergenic |
| TCGCGTTGCAGTTGCTTCCA+TGG | 0.464041 | 7_2:+74346247 | None:intergenic |
| ACCAATGCTGGATTTGCCAT+TGG | 0.466179 | 7_2:-74340480 | Msa1075940:CDS |
| GAATCGTGTTGGGTTTGGGT+TGG | 0.466366 | 7_2:+74346189 | None:intergenic |
| GTGGGGATGGAAGTGATAGA+AGG | 0.470752 | 7_2:+74346217 | None:intergenic |
| ATGTGTAATGTAGGTTATGT+AGG | 0.476770 | 7_2:-74339539 | Msa1075940:three_prime_UTR |
| CCTAGTATTTCCAAGAAGCT+TGG | 0.480992 | 7_2:-74339797 | Msa1075940:three_prime_UTR |
| TCTGAGGACTGTTTCCAAGC+TGG | 0.485783 | 7_2:+74344747 | None:intergenic |
| ATTGGAAAATCTGCAGAGTA+AGG | 0.490190 | 7_2:+74339837 | None:intergenic |
| AAAACAGGCTGCATCCCTGC+TGG | 0.490762 | 7_2:+74342041 | None:intergenic |
| ATAGATACTATGTGTAATGT+AGG | 0.491810 | 7_2:-74339548 | Msa1075940:three_prime_UTR |
| GAAGCAATTGTTGCTTCTCC+GGG | 0.492225 | 7_2:-74346005 | Msa1075940:CDS |
| GTAAGGATGCTGACGAAAGC+AGG | 0.492330 | 7_2:+74339854 | None:intergenic |
| TGCGACCCTAGCATTTCTCT+TGG | 0.495209 | 7_2:+74339442 | None:intergenic |
| TGGGTTGGAAATTGTGGGGA+TGG | 0.498287 | 7_2:+74346204 | None:intergenic |
| TTCTGTTGGTGCTGAACCGT+GGG | 0.499169 | 7_2:-74341706 | Msa1075940:CDS |
| AATAGCATCCATTATTATGC+AGG | 0.500671 | 7_2:-74344723 | Msa1075940:intron |
| CATTCTAGGTTTCAACTCTA+CGG | 0.501325 | 7_2:+74345980 | None:intergenic |
| TTGCAGTGAGTGCTGTTAGT+TGG | 0.503068 | 7_2:-74342595 | Msa1075940:intron |
| CCTTTAATCTCTCCAGAAAA+GGG | 0.505363 | 7_2:-74339495 | Msa1075940:three_prime_UTR |
| TGTGCGGCGTATGATTGGTT+CGG | 0.506219 | 7_2:+74346084 | None:intergenic |
| CTGAAAGAAATCAGAAAATG+AGG | 0.509488 | 7_2:+74339657 | None:intergenic |
| CCTGCTGGATTTATATTGAA+AGG | 0.509502 | 7_2:+74342056 | None:intergenic |
| CCTTTCAATATAAATCCAGC+AGG | 0.511255 | 7_2:-74342056 | Msa1075940:CDS |
| TCTCCAGAAAAGGGCCTTGG+TGG | 0.511496 | 7_2:-74339486 | Msa1075940:three_prime_UTR |
| CGATATCAAATATATTGAAA+AGG | 0.513329 | 7_2:+74341652 | None:intergenic |
| CCTTTCCAAGCATCGTCGCT+GGG | 0.515772 | 7_2:-74341998 | Msa1075940:intron |
| AGCAATGCTTTGAAACGCTA+TGG | 0.526091 | 7_2:-74339908 | Msa1075940:CDS |
| ATCAACCTTCTATCAAATCC+AGG | 0.531323 | 7_2:+74345810 | None:intergenic |
| CAAGCATATAATGTGATGCC+AGG | 0.532880 | 7_2:-74339935 | Msa1075940:CDS |
| TCAGCACCAACAGAAGTGTC+AGG | 0.534627 | 7_2:+74341714 | None:intergenic |
| CTTCTATCAAATCCAGGAAG+AGG | 0.536990 | 7_2:+74345816 | None:intergenic |
| CAGAAAAGGGCCTTGGTGGT+AGG | 0.542081 | 7_2:-74339482 | Msa1075940:three_prime_UTR |
| GCGTATGATTGGTTCGGAGT+CGG | 0.546875 | 7_2:+74346090 | None:intergenic |
| CAGTGAGTGCTGTTAGTTGG+TGG | 0.551689 | 7_2:-74342592 | Msa1075940:CDS |
| TTAATTGTGATTAGTCGTGT+TGG | 0.553472 | 7_2:-74345849 | Msa1075940:CDS |
| ACCAATGGCAAATCCAGCAT+TGG | 0.555624 | 7_2:+74340479 | None:intergenic |
| ATTGAAAAGGAAGACAAAGA+AGG | 0.556399 | 7_2:+74341665 | None:intergenic |
| TTACGGAAAGAAGGTTTGGA+TGG | 0.557913 | 7_2:-74344391 | Msa1075940:CDS |
| TCTTCACCATAGTCACTATG+TGG | 0.559637 | 7_2:-74342544 | Msa1075940:CDS |
| GGAGATTAAACACCTTAAAG+TGG | 0.559820 | 7_2:-74339518 | Msa1075940:three_prime_UTR |
| TTGTAACCAAGAGAAATGCT+AGG | 0.560083 | 7_2:-74339448 | Msa1075940:three_prime_UTR |
| CTTCTGTTGGTGCTGAACCG+TGG | 0.562221 | 7_2:-74341707 | Msa1075940:CDS |
| CCGGAAACTCATGGTAGCGA+TGG | 0.567781 | 7_2:-74346029 | Msa1075940:CDS |
| GAAATTCTGCGGTGAAGCGA+AGG | 0.572071 | 7_2:+74346128 | None:intergenic |
| GCAATCACCTATTACTGAAG+TGG | 0.575127 | 7_2:-74342090 | Msa1075940:CDS |
| GGTTTGGGTTGGAAATTGTG+GGG | 0.575223 | 7_2:+74346200 | None:intergenic |
| TCAAACTTGCTTCTGCTGCA+AGG | 0.576107 | 7_2:-74342469 | Msa1075940:intron |
| ATCGAGAACACTTGAAGTAG+TGG | 0.586824 | 7_2:+74340518 | None:intergenic |
| TACGGAAAGAAGGTTTGGAT+GGG | 0.589972 | 7_2:-74344390 | Msa1075940:CDS |
| TAGAACTGATGTAAAACCAA+TGG | 0.590223 | 7_2:+74340464 | None:intergenic |
| TTGAATCCTGACACTTCTGT+TGG | 0.594771 | 7_2:-74341720 | Msa1075940:CDS |
| GGGATGGAAGTGATAGAAGG+AGG | 0.595695 | 7_2:+74346220 | None:intergenic |
| ATAATGGATGCTATTATCTG+AGG | 0.596086 | 7_2:+74344731 | None:intergenic |
| TATGTGTTGGAATACTGATA+GGG | 0.596990 | 7_2:-74343248 | Msa1075940:CDS |
| CGAAAGCAGGAATGATAGCA+TGG | 0.600944 | 7_2:+74339867 | None:intergenic |
| TGTAACCAAGAGAAATGCTA+GGG | 0.607102 | 7_2:-74339447 | Msa1075940:three_prime_UTR |
| TAGCTTCTGACAGATGAACT+TGG | 0.608534 | 7_2:-74344803 | Msa1075940:intron |
| CCCAGCGACGATGCTTGGAA+AGG | 0.611110 | 7_2:+74341998 | None:intergenic |
| TGTTATAGGAGTGTGTTAGA+GGG | 0.615626 | 7_2:+74339419 | None:intergenic |
| GTGGTGCAATGACTATTACA+TGG | 0.621268 | 7_2:-74343728 | Msa1075940:CDS |
| ACTGCTGCGAAGTCCAGCCA+TGG | 0.633573 | 7_2:-74346264 | Msa1075940:exon |
| ATGATTGGTTCGGAGTCGGT+CGG | 0.641551 | 7_2:+74346094 | None:intergenic |
| AAGAGACAGCTTCAGCTCAG+AGG | 0.651403 | 7_2:+74344772 | None:intergenic |
| TATATGGAATAGTAGACCCA+CGG | 0.665297 | 7_2:+74341690 | None:intergenic |
| AAAACTTCTTGACTCAAGAG+CGG | 0.670199 | 7_2:+74346053 | None:intergenic |
| ATTACTAATGCCTACCACCA+AGG | 0.674198 | 7_2:+74339472 | None:intergenic |
| CTTTCAATATAAATCCAGCA+GGG | 0.675202 | 7_2:-74342055 | Msa1075940:CDS |
| CGATGCTTGGAAAGGCCAAG+AGG | 0.683633 | 7_2:+74342006 | None:intergenic |
| CTTCACCATAGTCACTATGT+GGG | 0.692600 | 7_2:-74342543 | Msa1075940:CDS |
| TGGAAAGGCCAAGAGGTACG+AGG | 0.696124 | 7_2:+74342013 | None:intergenic |
| TGGGCAGTTGTAGTAACTGA+AGG | 0.702415 | 7_2:-74342524 | Msa1075940:CDS |
| AGAAGTTAACGGAAATTCTG+CGG | 0.703464 | 7_2:+74346117 | None:intergenic |
| AAGAGCGGAGTCTTAATGTG+CGG | 0.706521 | 7_2:+74346068 | None:intergenic |
| AAAGGCCAAGAGGTACGAGG+TGG | 0.736328 | 7_2:+74342016 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATGCTTTATAAAAATA+CGG | - | chr7_2:74341840-74341859 | Msa1075940:intron | 10.0% |
| !!! | CTTTTTAATATTGATTCATA+TGG | - | chr7_2:74340131-74340150 | Msa1075940:intron | 15.0% |
| !! | TGATAATCATATATAACTAA+AGG | + | chr7_2:74341128-74341147 | None:intergenic | 15.0% |
| !! | AAAACAAAGAAATGAAATTT+AGG | + | chr7_2:74341824-74341843 | None:intergenic | 15.0% |
| !!! | TTATGCATGAATATAAATTT+TGG | - | chr7_2:74342144-74342163 | Msa1075940:intron | 15.0% |
| !! | TATTCTACAATTTCTATTTA+TGG | - | chr7_2:74342310-74342329 | Msa1075940:intron | 15.0% |
| !! | TTTATATTGAAAGGAATATA+TGG | + | chr7_2:74343669-74343688 | None:intergenic | 15.0% |
| !!! | TTTCTAAAATTGCTATTAAT+TGG | - | chr7_2:74343945-74343964 | Msa1075940:intron | 15.0% |
| !!! | CAGTTGAAATATATTTTTAA+GGG | + | chr7_2:74344699-74344718 | None:intergenic | 15.0% |
| !!! | TCAGTTGAAATATATTTTTA+AGG | + | chr7_2:74344700-74344719 | None:intergenic | 15.0% |
| !!! | ACTGATATTTTAATATAGTA+TGG | + | chr7_2:74344889-74344908 | None:intergenic | 15.0% |
| !! | TTAAATTTCTAAGTATCAAA+AGG | + | chr7_2:74345119-74345138 | None:intergenic | 15.0% |
| !!! | CATTTTTTAAAAGTGAGATT+AGG | - | chr7_2:74339835-74339854 | Msa1075940:three_prime_UTR | 20.0% |
| !!! | CTTGTAAGTTTTCTAAAAAA+TGG | + | chr7_2:74340317-74340336 | None:intergenic | 20.0% |
| !! | TACATTTCTTTGTATATCTT+TGG | + | chr7_2:74340344-74340363 | None:intergenic | 20.0% |
| !! | AAAGATATACAAAGAAATGT+AGG | - | chr7_2:74340343-74340362 | Msa1075940:intron | 20.0% |
| !! | ATTAAATGGAGAAATGATAT+TGG | + | chr7_2:74340455-74340474 | None:intergenic | 20.0% |
| !! | TTATTGCTGAAAATTCTAAT+GGG | + | chr7_2:74340546-74340565 | None:intergenic | 20.0% |
| !! | ATTATTGCTGAAAATTCTAA+TGG | + | chr7_2:74340547-74340566 | None:intergenic | 20.0% |
| !! | ATAAGTTATTTATCCAAACA+GGG | + | chr7_2:74340613-74340632 | None:intergenic | 20.0% |
| !! | AATAAGTTATTTATCCAAAC+AGG | + | chr7_2:74340614-74340633 | None:intergenic | 20.0% |
| !! | ATTATTCAAGCGATAAAAAA+TGG | + | chr7_2:74340873-74340892 | None:intergenic | 20.0% |
| !!! | CTTAATTTCTTTCAAAGTTT+TGG | - | chr7_2:74341244-74341263 | Msa1075940:intron | 20.0% |
| !! | TATATCATGAATCACATAAA+CGG | + | chr7_2:74341453-74341472 | None:intergenic | 20.0% |
| !! | TTTATGTGATTCATGATATA+AGG | - | chr7_2:74341453-74341472 | Msa1075940:intron | 20.0% |
| !! | AATGAACAATTCATTAATTG+AGG | + | chr7_2:74341481-74341500 | None:intergenic | 20.0% |
| !! | TAGAAATTGTAGAATAACAT+AGG | + | chr7_2:74342306-74342325 | None:intergenic | 20.0% |
| !!! | AAATTTCAAAAGCGATTTTT+TGG | + | chr7_2:74342564-74342583 | None:intergenic | 20.0% |
| !! | AAAATATATATTCTAGCGTA+TGG | + | chr7_2:74342877-74342896 | None:intergenic | 20.0% |
| !! | TTAAAGTTGTAAAACATCTT+TGG | + | chr7_2:74343035-74343054 | None:intergenic | 20.0% |
| !! | TTATATCATTGAGTTATTTG+TGG | - | chr7_2:74343088-74343107 | Msa1075940:intron | 20.0% |
| !!! | TGGCAATTAAAACTTTTTAT+GGG | + | chr7_2:74343373-74343392 | None:intergenic | 20.0% |
| !!! | ATGGCAATTAAAACTTTTTA+TGG | + | chr7_2:74343374-74343393 | None:intergenic | 20.0% |
| !!! | AATATTAGCTTATTTGACTT+GGG | - | chr7_2:74343474-74343493 | Msa1075940:intron | 20.0% |
| !!! | TATTTTTAACAACATGTAAC+TGG | + | chr7_2:74343886-74343905 | None:intergenic | 20.0% |
| !! | CGATATCAAATATATTGAAA+AGG | + | chr7_2:74344082-74344101 | None:intergenic | 20.0% |
| !! | TGAACAATGTACTTTATATA+AGG | - | chr7_2:74344131-74344150 | Msa1075940:intron | 20.0% |
| !! | TTTATTTCGTTACAAGTTAT+TGG | - | chr7_2:74344177-74344196 | Msa1075940:CDS | 20.0% |
| !!! | TTTCACAAATTGATAATTGA+TGG | - | chr7_2:74344201-74344220 | Msa1075940:CDS | 20.0% |
| !!! | TAATTGATGGATTAAACTTA+AGG | - | chr7_2:74344214-74344233 | Msa1075940:CDS | 20.0% |
| !!! | AAGAGAATATTTCTTCTTTT+GGG | + | chr7_2:74344558-74344577 | None:intergenic | 20.0% |
| !!! | TAAGAGAATATTTCTTCTTT+TGG | + | chr7_2:74344559-74344578 | None:intergenic | 20.0% |
| !! | CAAATATAGAAATAGTTTAC+TGG | + | chr7_2:74344637-74344656 | None:intergenic | 20.0% |
| !!! | TTTATTAACTTGTACCTTAA+TGG | - | chr7_2:74344658-74344677 | Msa1075940:intron | 20.0% |
| !! | TGAAAATTAACAATCAGAAT+AGG | + | chr7_2:74344793-74344812 | None:intergenic | 20.0% |
| !! | AATATAGTATGGAAATGAAT+TGG | + | chr7_2:74344878-74344897 | None:intergenic | 20.0% |
| !!! | TATCTATCTTGTTTAATATG+TGG | - | chr7_2:74344925-74344944 | Msa1075940:intron | 20.0% |
| !! | TATATACAGTATTGTACATT+TGG | - | chr7_2:74345645-74345664 | Msa1075940:intron | 20.0% |
| !!! | ATTTTCCAATATAATTGATC+AGG | - | chr7_2:74345907-74345926 | Msa1075940:CDS | 20.0% |
| !!! | TTTTCCAATATAATTGATCA+GGG | - | chr7_2:74345908-74345927 | Msa1075940:CDS | 20.0% |
| !!! | GAACTTATTTTGATGATTTT+AGG | - | chr7_2:74346100-74346119 | Msa1075940:CDS | 20.0% |
| !!! | TTTTAGGAAAGTATTTAGTT+AGG | - | chr7_2:74346116-74346135 | Msa1075940:CDS | 20.0% |
| !!! | AAATGGAAATTCTAGTTTTG+TGG | + | chr7_2:74339569-74339588 | None:intergenic | 25.0% |
| !!! | TTTTTAAAAGTGAGATTAGG+AGG | - | chr7_2:74339838-74339857 | Msa1075940:three_prime_UTR | 25.0% |
| ! | ACAAAGCTCATATAATCTTT+AGG | + | chr7_2:74339948-74339967 | None:intergenic | 25.0% |
| !! | TTTTCATTGCAAAATCCAAA+AGG | - | chr7_2:74340026-74340045 | Msa1075940:intron | 25.0% |
| ! | TTTCATTGCAAAATCCAAAA+GGG | - | chr7_2:74340027-74340046 | Msa1075940:intron | 25.0% |
| ! | AAAACAAAAACAATAGAGAG+AGG | - | chr7_2:74340376-74340395 | Msa1075940:intron | 25.0% |
| ! | TCATTTCTCCATTTAATATG+AGG | - | chr7_2:74340458-74340477 | Msa1075940:CDS | 25.0% |
| ! | CATTGATACCTCATATTAAA+TGG | + | chr7_2:74340469-74340488 | None:intergenic | 25.0% |
| ! | AAGCACTTATGCTATAATAT+AGG | + | chr7_2:74340642-74340661 | None:intergenic | 25.0% |
| !!! | AAGCTATAACCTTTTTTCAT+AGG | - | chr7_2:74340733-74340752 | Msa1075940:intron | 25.0% |
| ! | GTTAAGCATTCATATAAAAC+AGG | - | chr7_2:74341179-74341198 | Msa1075940:intron | 25.0% |
| ! | TAAAACAGGTTACTATTATG+TGG | - | chr7_2:74341193-74341212 | Msa1075940:intron | 25.0% |
| ! | AGAAGATTAAGAGTTATATG+TGG | - | chr7_2:74341368-74341387 | Msa1075940:intron | 25.0% |
| ! | GAAGATTAAGAGTTATATGT+GGG | - | chr7_2:74341369-74341388 | Msa1075940:intron | 25.0% |
| !! | TTTTCTATATATCGTAATCC+CGG | - | chr7_2:74341717-74341736 | Msa1075940:CDS | 25.0% |
| !! | CTTTTACTGAACCATAAATA+TGG | - | chr7_2:74341891-74341910 | Msa1075940:intron | 25.0% |
| !!! | AAAATATGTGTTGCTTTTGT+AGG | - | chr7_2:74341943-74341962 | Msa1075940:intron | 25.0% |
| ! | TATGATAAAGTCAAAGTTTG+TGG | + | chr7_2:74342072-74342091 | None:intergenic | 25.0% |
| ! | AACCGTAAATGATAAACAAA+TGG | - | chr7_2:74342252-74342271 | Msa1075940:intron | 25.0% |
| ! | AGCCATTTGTTTATCATTTA+CGG | + | chr7_2:74342257-74342276 | None:intergenic | 25.0% |
| ! | TGGGACAAAATATAATGAAA+TGG | - | chr7_2:74342695-74342714 | Msa1075940:intron | 25.0% |
| !! | TTTAGTTCCATTAAAAAGGA+TGG | + | chr7_2:74342747-74342766 | None:intergenic | 25.0% |
| !!! | GCATTTTAGTTCCATTAAAA+AGG | + | chr7_2:74342751-74342770 | None:intergenic | 25.0% |
| ! | TGTGAGTTCTATTATATGTT+TGG | + | chr7_2:74342822-74342841 | None:intergenic | 25.0% |
| !! | GATGTTTTACAACTTTAATC+AGG | - | chr7_2:74343037-74343056 | Msa1075940:intron | 25.0% |
| !! | GAATATTAGCTTATTTGACT+TGG | - | chr7_2:74343473-74343492 | Msa1075940:intron | 25.0% |
| ! | GTCATAATAAATAAGGACAA+TGG | + | chr7_2:74343518-74343537 | None:intergenic | 25.0% |
| ! | ACTGTCTGTCATAATAAATA+AGG | + | chr7_2:74343525-74343544 | None:intergenic | 25.0% |
| ! | TGTAAAAATTCGTCTGAAAA+GGG | - | chr7_2:74344241-74344260 | Msa1075940:intron | 25.0% |
| ! | TTGTAGGCTGAATTAAAAAT+AGG | - | chr7_2:74344493-74344512 | Msa1075940:intron | 25.0% |
| ! | TGTAGGCTGAATTAAAAATA+GGG | - | chr7_2:74344494-74344513 | Msa1075940:intron | 25.0% |
| !! | TTAATATGTGGATTTTTCAC+AGG | - | chr7_2:74344937-74344956 | Msa1075940:intron | 25.0% |
| !! | AATATTTTCCTGTTATGTGA+TGG | - | chr7_2:74345137-74345156 | Msa1075940:intron | 25.0% |
| !! | CAAGAAATGACAAGTATTTT+GGG | + | chr7_2:74345538-74345557 | None:intergenic | 25.0% |
| !! | ATTTTCTGATTTCTTTCAGA+AGG | - | chr7_2:74346078-74346097 | Msa1075940:CDS | 25.0% |
| ! | ATAGATACTATGTGTAATGT+AGG | - | chr7_2:74346183-74346202 | Msa1075940:CDS | 25.0% |
| ! | AAAAAACAAGAGTCACGTTT+TGG | - | chr7_2:74339438-74339457 | Msa1075940:three_prime_UTR | 30.0% |
| AGGTGAATTTCTTGTGAAAA+TGG | + | chr7_2:74339586-74339605 | None:intergenic | 30.0% | |
| AACCTAGAATGTTCAAGAAT+AGG | - | chr7_2:74339763-74339782 | Msa1075940:three_prime_UTR | 30.0% | |
| AACCTATTCTTGAACATTCT+AGG | + | chr7_2:74339768-74339787 | None:intergenic | 30.0% | |
| !!! | CGTTTTGGTTCTGTTATTAA+TGG | - | chr7_2:74339801-74339820 | Msa1075940:three_prime_UTR | 30.0% |
| ! | TTAATTGTGATTAGTCGTGT+TGG | - | chr7_2:74339882-74339901 | Msa1075940:exon | 30.0% |
| !! | GATTATATGAGCTTTGTTTC+TGG | - | chr7_2:74339951-74339970 | Msa1075940:CDS | 30.0% |
| TCCTACTAATCATTCAATCA+TGG | + | chr7_2:74340053-74340072 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTCAAACTATCAG+CGG | + | chr7_2:74340216-74340235 | None:intergenic | 30.0% |
| CGCTGATAGTTTGAAAAAAT+GGG | - | chr7_2:74340214-74340233 | Msa1075940:intron | 30.0% | |
| ATTTCATTCCCCATATAATG+GGG | + | chr7_2:74340505-74340524 | None:intergenic | 30.0% | |
| GATTTCATTCCCCATATAAT+GGG | + | chr7_2:74340506-74340525 | None:intergenic | 30.0% | |
| AGATTTCATTCCCCATATAA+TGG | + | chr7_2:74340507-74340526 | None:intergenic | 30.0% | |
| ACTTATGCTATAATATAGGC+TGG | + | chr7_2:74340638-74340657 | None:intergenic | 30.0% | |
| CCAAGATAACCTATGAAAAA+AGG | + | chr7_2:74340745-74340764 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTCATAGGTTATCT+TGG | - | chr7_2:74340742-74340761 | Msa1075940:intron | 30.0% |
| CATGAGTTTATACATGTGAA+CGG | - | chr7_2:74340896-74340915 | Msa1075940:intron | 30.0% | |
| !! | ATAATGGATGCTATTATCTG+AGG | + | chr7_2:74341003-74341022 | None:intergenic | 30.0% |
| AATAGCATCCATTATTATGC+AGG | - | chr7_2:74341008-74341027 | Msa1075940:intron | 30.0% | |
| !!! | TTTTCTGCTTGTTACTTTCA+AGG | - | chr7_2:74341084-74341103 | Msa1075940:intron | 30.0% |
| AAAGGAAGTTAAACATCCTT+TGG | + | chr7_2:74341110-74341129 | None:intergenic | 30.0% | |
| TTCCTTCTCTAGTAAAGTTA+CGG | - | chr7_2:74341323-74341342 | Msa1075940:intron | 30.0% | |
| TATTAGCTCACTGTTTGATA+TGG | + | chr7_2:74341404-74341423 | None:intergenic | 30.0% | |
| ! | GCTTATGCTATCAAATTTTG+AGG | + | chr7_2:74341677-74341696 | None:intergenic | 30.0% |
| ! | CAAAATTTGATAGCATAAGC+CGG | - | chr7_2:74341677-74341696 | Msa1075940:CDS | 30.0% |
| ! | AAAATTTGATAGCATAAGCC+GGG | - | chr7_2:74341678-74341697 | Msa1075940:CDS | 30.0% |
| TTACTGAACCATAAATATGG+TGG | - | chr7_2:74341894-74341913 | Msa1075940:intron | 30.0% | |
| TTGTAGGTTCAAACATGTTA+TGG | - | chr7_2:74341959-74341978 | Msa1075940:intron | 30.0% | |
| ATTTGATATTTGCCTTCTTC+AGG | - | chr7_2:74342440-74342459 | Msa1075940:intron | 30.0% | |
| ! | TCATCTCTTTTCATATGTGT+TGG | - | chr7_2:74342470-74342489 | Msa1075940:CDS | 30.0% |
| ATATGTGTTGGAATACTGAT+AGG | - | chr7_2:74342482-74342501 | Msa1075940:CDS | 30.0% | |
| TATGTGTTGGAATACTGATA+GGG | - | chr7_2:74342483-74342502 | Msa1075940:CDS | 30.0% | |
| TATGGACACATTACACAAAA+TGG | - | chr7_2:74342508-74342527 | Msa1075940:CDS | 30.0% | |
| AAAATGGTAACTCAACTTTC+AGG | - | chr7_2:74342524-74342543 | Msa1075940:CDS | 30.0% | |
| TAAGTCCAAATTTAAGCTAG+AGG | + | chr7_2:74342605-74342624 | None:intergenic | 30.0% | |
| ! | TCATTATATTTTGTCCCATC+TGG | + | chr7_2:74342693-74342712 | None:intergenic | 30.0% |
| !! | TTTGGTTCCATCCTTTTTAA+TGG | - | chr7_2:74342737-74342756 | Msa1075940:intron | 30.0% |
| AAAGTAAAGCTTCAGTACTA+TGG | - | chr7_2:74343237-74343256 | Msa1075940:CDS | 30.0% | |
| CAATTTCAATGAGGATAACA+AGG | + | chr7_2:74343319-74343338 | None:intergenic | 30.0% | |
| TAACATCTGCAATTTCAATG+AGG | + | chr7_2:74343328-74343347 | None:intergenic | 30.0% | |
| ATTGAAATTGCAGATGTTAC+TGG | - | chr7_2:74343329-74343348 | Msa1075940:intron | 30.0% | |
| ! | GGCATGAAAGTCTTAATTTT+TGG | + | chr7_2:74343602-74343621 | None:intergenic | 30.0% |
| CTTTCAATATAAATCCAGCA+GGG | - | chr7_2:74343676-74343695 | Msa1075940:intron | 30.0% | |
| !! | GTGTCATTTGAAATGCAAAA+CGG | + | chr7_2:74343769-74343788 | None:intergenic | 30.0% |
| ACTTCACAAATGAGTAGTAA+AGG | + | chr7_2:74343921-74343940 | None:intergenic | 30.0% | |
| ! | TATTAATTGGCAGTTTGCTT+GGG | - | chr7_2:74343958-74343977 | Msa1075940:intron | 30.0% |
| ATTGAAAAGGAAGACAAAGA+AGG | + | chr7_2:74344069-74344088 | None:intergenic | 30.0% | |
| CTGTAAAAATTCGTCTGAAA+AGG | - | chr7_2:74344240-74344259 | Msa1075940:intron | 30.0% | |
| ! | TGCTACATCAGTAACATTTT+GGG | + | chr7_2:74344333-74344352 | None:intergenic | 30.0% |
| CATTTATACTCTGCAAATCT+TGG | + | chr7_2:74344415-74344434 | None:intergenic | 30.0% | |
| TGTTTCTCTAGTACTATTGT+AGG | - | chr7_2:74344477-74344496 | Msa1075940:intron | 30.0% | |
| TTTCTTAACATATACCCCAA+GGG | + | chr7_2:74344535-74344554 | None:intergenic | 30.0% | |
| ATATATTTCAACTGAGACCA+TGG | - | chr7_2:74344705-74344724 | Msa1075940:intron | 30.0% | |
| ! | TTTTTCCATATTCAAGTCCA+TGG | + | chr7_2:74344725-74344744 | None:intergenic | 30.0% |
| AAGTAATCAGCAATTTCCTT+TGG | + | chr7_2:74344971-74344990 | None:intergenic | 30.0% | |
| AGAATACCAAATATTAAGCC+CGG | - | chr7_2:74345007-74345026 | Msa1075940:intron | 30.0% | |
| ! | TACCTCATGAAAATTTTGCA+GGG | - | chr7_2:74345168-74345187 | Msa1075940:intron | 30.0% |
| TAGAACTGATGTAAAACCAA+TGG | + | chr7_2:74345270-74345289 | None:intergenic | 30.0% | |
| ACTTTGCATTCAAGCTTAAA+TGG | - | chr7_2:74345333-74345352 | Msa1075940:intron | 30.0% | |
| ! | CCAAGAAATGACAAGTATTT+TGG | + | chr7_2:74345539-74345558 | None:intergenic | 30.0% |
| ! | CCAAAATACTTGTCATTTCT+TGG | - | chr7_2:74345536-74345555 | Msa1075940:intron | 30.0% |
| TCTCGTCTACAGAAAATTAT+TGG | - | chr7_2:74345586-74345605 | Msa1075940:intron | 30.0% | |
| ACCTGGAAAAATAAAACCAA+GGG | + | chr7_2:74345745-74345764 | None:intergenic | 30.0% | |
| AACCTGGAAAAATAAAACCA+AGG | + | chr7_2:74345746-74345765 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTATTTTTCCAGGT+TGG | - | chr7_2:74345745-74345764 | Msa1075940:intron | 30.0% |
| CGATCTTCTAAGTTCAATAA+TGG | + | chr7_2:74345773-74345792 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGGGGAATTAAATC+TGG | - | chr7_2:74345956-74345975 | Msa1075940:CDS | 30.0% |
| ! | TTGTAGGTCTTTTAGTATTG+AGG | - | chr7_2:74345980-74345999 | Msa1075940:CDS | 30.0% |
| AGATTACTAGCAATGCTTAA+TGG | + | chr7_2:74346007-74346026 | None:intergenic | 30.0% | |
| ! | ATTAAGCATTGCTAGTAATC+TGG | - | chr7_2:74346006-74346025 | Msa1075940:CDS | 30.0% |
| ! | AGAAAATGAGGCTTTTGAAT+CGG | + | chr7_2:74346065-74346084 | None:intergenic | 30.0% |
| CTGAAAGAAATCAGAAAATG+AGG | + | chr7_2:74346077-74346096 | None:intergenic | 30.0% | |
| ATGTGTAATGTAGGTTATGT+AGG | - | chr7_2:74346192-74346211 | Msa1075940:CDS | 30.0% | |
| AGAAGTTAACGGAAATTCTG+CGG | + | chr7_2:74339617-74339636 | None:intergenic | 35.0% | |
| AAAACTTCTTGACTCAAGAG+CGG | + | chr7_2:74339681-74339700 | None:intergenic | 35.0% | |
| ! | CTTGAGTCAAGAAGTTTTTC+CGG | - | chr7_2:74339683-74339702 | Msa1075940:three_prime_UTR | 35.0% |
| CATTCTAGGTTTCAACTCTA+CGG | + | chr7_2:74339754-74339773 | None:intergenic | 35.0% | |
| ! | TTTCTGAATTTCGTGCGTTT+TGG | - | chr7_2:74339786-74339805 | Msa1075940:three_prime_UTR | 35.0% |
| !! | GGTTATTTTATTCCTCTTCC+TGG | - | chr7_2:74339903-74339922 | Msa1075940:CDS | 35.0% |
| ATCAACCTTCTATCAAATCC+AGG | + | chr7_2:74339924-74339943 | None:intergenic | 35.0% | |
| !! | TTTGTTTCTGGTTCTTCTGT+TGG | - | chr7_2:74339963-74339982 | Msa1075940:CDS | 35.0% |
| GCCATGATTGAATGATTAGT+AGG | - | chr7_2:74340049-74340068 | Msa1075940:intron | 35.0% | |
| ! | GAAATGTTTGCTAGTGGTTA+TGG | - | chr7_2:74340073-74340092 | Msa1075940:intron | 35.0% |
| GGAAATTAGTTGTAAGCTCA+AGG | - | chr7_2:74340094-74340113 | Msa1075940:intron | 35.0% | |
| CCGCTGATAGTTTGAAAAAA+TGG | - | chr7_2:74340213-74340232 | Msa1075940:intron | 35.0% | |
| TTGAATGTAACCATACGTGT+TGG | - | chr7_2:74340242-74340261 | Msa1075940:intron | 35.0% | |
| ACTAGAGACACGTTTAATAG+AGG | - | chr7_2:74340275-74340294 | Msa1075940:intron | 35.0% | |
| AGGTTATCTTGGAGACTTTA+TGG | - | chr7_2:74340753-74340772 | Msa1075940:intron | 35.0% | |
| ! | AAAAACAGCACTTTTACACC+AGG | + | chr7_2:74340844-74340863 | None:intergenic | 35.0% |
| AACAAACTCAGTGAACGAAA+GGG | + | chr7_2:74341039-74341058 | None:intergenic | 35.0% | |
| TAACAAACTCAGTGAACGAA+AGG | + | chr7_2:74341040-74341059 | None:intergenic | 35.0% | |
| GTGTAGATGCAGTTCATAAA+AGG | + | chr7_2:74341270-74341289 | None:intergenic | 35.0% | |
| TACACATCATATTCATGTGC+AGG | - | chr7_2:74341285-74341304 | Msa1075940:intron | 35.0% | |
| TTCCGTAACTTTACTAGAGA+AGG | + | chr7_2:74341328-74341347 | None:intergenic | 35.0% | |
| CTAGTAAAGTTACGGAAAGA+AGG | - | chr7_2:74341331-74341350 | Msa1075940:intron | 35.0% | |
| AAAGTTACGGAAAGAAGGTT+TGG | - | chr7_2:74341336-74341355 | Msa1075940:intron | 35.0% | |
| TGTTCATTTGTTCTTTCAGC+TGG | - | chr7_2:74341493-74341512 | Msa1075940:intron | 35.0% | |
| CTAGCAGCATAAATTGAGTA+TGG | + | chr7_2:74341576-74341595 | None:intergenic | 35.0% | |
| CAATTTATGCTGCTAGTTAC+AGG | - | chr7_2:74341580-74341599 | Msa1075940:intron | 35.0% | |
| ! | AACCATCTTTTTAACCTTCC+CGG | + | chr7_2:74341699-74341718 | None:intergenic | 35.0% |
| ACATAGCAGTGACATATCAA+CGG | - | chr7_2:74341773-74341792 | Msa1075940:intron | 35.0% | |
| GAGTTGTTCCACCATATTTA+TGG | + | chr7_2:74341905-74341924 | None:intergenic | 35.0% | |
| ! | AAATATGGTGGAACAACTCT+TGG | - | chr7_2:74341906-74341925 | Msa1075940:intron | 35.0% |
| ! | TATGGTGACAACTTTGTTGT+TGG | - | chr7_2:74341977-74341996 | Msa1075940:intron | 35.0% |
| !! | ACAACTTTGTTGTTGGTTTG+TGG | - | chr7_2:74341984-74342003 | Msa1075940:intron | 35.0% |
| TGTGATACCATATCAGAATC+TGG | - | chr7_2:74342029-74342048 | Msa1075940:CDS | 35.0% | |
| ACCATATCAGAATCTGGATT+TGG | - | chr7_2:74342035-74342054 | Msa1075940:CDS | 35.0% | |
| ACCAAATCCAGATTCTGATA+TGG | + | chr7_2:74342039-74342058 | None:intergenic | 35.0% | |
| AAAGTCCTGAATGAAAAGAC+AGG | + | chr7_2:74342215-74342234 | None:intergenic | 35.0% | |
| ! | TGTCTTTTCATTCAGGACTT+TGG | - | chr7_2:74342214-74342233 | Msa1075940:intron | 35.0% |
| ! | GTCTTTTCATTCAGGACTTT+GGG | - | chr7_2:74342215-74342234 | Msa1075940:intron | 35.0% |
| ! | TCTTTTCATTCAGGACTTTG+GGG | - | chr7_2:74342216-74342235 | Msa1075940:intron | 35.0% |
| ! | AATGACGAAGCACTTTGAAA+AGG | + | chr7_2:74342346-74342365 | None:intergenic | 35.0% |
| GGTGTGTCTTTCAATTGAAA+TGG | + | chr7_2:74342372-74342391 | None:intergenic | 35.0% | |
| TGGAATACTGATAGGGTATA+TGG | - | chr7_2:74342490-74342509 | Msa1075940:CDS | 35.0% | |
| ! | TGTTGCCTCTAGCTTAAATT+TGG | - | chr7_2:74342597-74342616 | Msa1075940:intron | 35.0% |
| ACTTACTGTAGTAACATGTC+TGG | - | chr7_2:74342620-74342639 | Msa1075940:intron | 35.0% | |
| ! | TTGAGTAGTTTTCTTCCAGA+TGG | - | chr7_2:74342675-74342694 | Msa1075940:intron | 35.0% |
| ! | TGAGTAGTTTTCTTCCAGAT+GGG | - | chr7_2:74342676-74342695 | Msa1075940:intron | 35.0% |
| CAAAGAGAACATAACTGAAC+AGG | + | chr7_2:74342721-74342740 | None:intergenic | 35.0% | |
| CTGTTCAGTTATGTTCTCTT+TGG | - | chr7_2:74342719-74342738 | Msa1075940:intron | 35.0% | |
| TTAATATCTACTCCTTCGTC+CGG | - | chr7_2:74342930-74342949 | Msa1075940:intron | 35.0% | |
| !!! | ATTGCCATTTTCTGACAAGT+TGG | - | chr7_2:74343386-74343405 | Msa1075940:intron | 35.0% |
| TTACATACCTCAGAAAACTG+TGG | - | chr7_2:74343425-74343444 | Msa1075940:intron | 35.0% | |
| ! | GATTCTGTTTTCATGTTCTG+TGG | - | chr7_2:74343447-74343466 | Msa1075940:intron | 35.0% |
| GACAGTTTATGTCTTTCTGA+AGG | - | chr7_2:74343539-74343558 | Msa1075940:intron | 35.0% | |
| ! | ATGCCTCTCAATTTGAAACA+GGG | - | chr7_2:74343617-74343636 | Msa1075940:intron | 35.0% |
| CCTGCTGGATTTATATTGAA+AGG | + | chr7_2:74343678-74343697 | None:intergenic | 35.0% | |
| CCTTTCAATATAAATCCAGC+AGG | - | chr7_2:74343675-74343694 | Msa1075940:intron | 35.0% | |
| TGCATTTCAAATGACACTCT+TGG | - | chr7_2:74343772-74343791 | Msa1075940:intron | 35.0% | |
| !! | CCTCATGATTCAAGTTTTGT+CGG | - | chr7_2:74343800-74343819 | Msa1075940:intron | 35.0% |
| ! | CTATTAATTGGCAGTTTGCT+TGG | - | chr7_2:74343957-74343976 | Msa1075940:intron | 35.0% |
| TATATGGAATAGTAGACCCA+CGG | + | chr7_2:74344044-74344063 | None:intergenic | 35.0% | |
| ! | GAAGACAAAGAAGGCATATA+TGG | + | chr7_2:74344060-74344079 | None:intergenic | 35.0% |
| ! | TCAACGTTTTCATTTCAGAC+CGG | + | chr7_2:74344269-74344288 | None:intergenic | 35.0% |
| GTGTTTCAACAAAGTTTGCA+TGG | - | chr7_2:74344304-74344323 | Msa1075940:intron | 35.0% | |
| ! | GTGCTACATCAGTAACATTT+TGG | + | chr7_2:74344334-74344353 | None:intergenic | 35.0% |
| ! | CTACATGCAATGTTTAGTTC+AGG | + | chr7_2:74344447-74344466 | None:intergenic | 35.0% |
| GTTTCTTAACATATACCCCA+AGG | + | chr7_2:74344536-74344555 | None:intergenic | 35.0% | |
| ! | AATGCTAACTTGTGCCATTA+AGG | + | chr7_2:74344675-74344694 | None:intergenic | 35.0% |
| ! | TGCTGATTACTTGAACAAGA+TGG | - | chr7_2:74344979-74344998 | Msa1075940:intron | 35.0% |
| GCTGATTACTTGAACAAGAT+GGG | - | chr7_2:74344980-74344999 | Msa1075940:intron | 35.0% | |
| GAATACCAAATATTAAGCCC+GGG | - | chr7_2:74345008-74345027 | Msa1075940:intron | 35.0% | |
| TACGATAGAATACCTCACAA+AGG | - | chr7_2:74345036-74345055 | Msa1075940:intron | 35.0% | |
| ! | GCAAAATTTTCATGAGGTAG+TGG | + | chr7_2:74345167-74345186 | None:intergenic | 35.0% |
| ! | CTACCTCATGAAAATTTTGC+AGG | - | chr7_2:74345167-74345186 | Msa1075940:intron | 35.0% |
| ! | ACCTCATGAAAATTTTGCAG+GGG | - | chr7_2:74345169-74345188 | Msa1075940:intron | 35.0% |
| ! | GGGTCTATTGTTAAGTGTTT+TGG | - | chr7_2:74345190-74345209 | Msa1075940:intron | 35.0% |
| GTGTTCTCGATCACTATTTA+CGG | - | chr7_2:74345225-74345244 | Msa1075940:intron | 35.0% | |
| GAGAAATGACTCAACATAAC+CGG | + | chr7_2:74345451-74345470 | None:intergenic | 35.0% | |
| ATACTACAGTACTACCAGTA+GGG | + | chr7_2:74345490-74345509 | None:intergenic | 35.0% | |
| AATACTACAGTACTACCAGT+AGG | + | chr7_2:74345491-74345510 | None:intergenic | 35.0% | |
| ATTGGAAAATCTGCAGAGTA+AGG | + | chr7_2:74345897-74345916 | None:intergenic | 35.0% | |
| !!! | TTCCAAGAAGCTTGGTTTTT+TGG | - | chr7_2:74345942-74345961 | Msa1075940:CDS | 35.0% |
| !!! | TCCAAGAAGCTTGGTTTTTT+GGG | - | chr7_2:74345943-74345962 | Msa1075940:CDS | 35.0% |
| ! | GGGAATTAAATCTGGTTTGT+AGG | - | chr7_2:74345964-74345983 | Msa1075940:CDS | 35.0% |
| GGAGATTAAACACCTTAAAG+TGG | - | chr7_2:74346213-74346232 | Msa1075940:CDS | 35.0% | |
| ! | AGAGATTAAAGGCCACTTTA+AGG | + | chr7_2:74346228-74346247 | None:intergenic | 35.0% |
| CCTTTAATCTCTCCAGAAAA+GGG | - | chr7_2:74346236-74346255 | Msa1075940:CDS | 35.0% | |
| TTGTAACCAAGAGAAATGCT+AGG | - | chr7_2:74346283-74346302 | Msa1075940:five_prime_UTR | 35.0% | |
| TGTAACCAAGAGAAATGCTA+GGG | - | chr7_2:74346284-74346303 | Msa1075940:five_prime_UTR | 35.0% | |
| ! | TGTTATAGGAGTGTGTTAGA+GGG | + | chr7_2:74346315-74346334 | None:intergenic | 35.0% |
| ! | GTTTTGTGGAGAATCGTGTT+GGG | + | chr7_2:74339555-74339574 | None:intergenic | 40.0% |
| !! | AGTTTTGTGGAGAATCGTGT+TGG | + | chr7_2:74339556-74339575 | None:intergenic | 40.0% |
| ! | GAAGTTTTTCCGGAAACTCA+TGG | - | chr7_2:74339693-74339712 | Msa1075940:three_prime_UTR | 40.0% |
| CTTCTATCAAATCCAGGAAG+AGG | + | chr7_2:74339918-74339937 | None:intergenic | 40.0% | |
| CTCTTCCTGGATTTGATAGA+AGG | - | chr7_2:74339916-74339935 | Msa1075940:CDS | 40.0% | |
| ! | TCATTCAATCATGGCCCTTT+TGG | + | chr7_2:74340044-74340063 | None:intergenic | 40.0% |
| ! | GTAGGAGAAATGTTTGCTAG+TGG | - | chr7_2:74340067-74340086 | Msa1075940:intron | 40.0% |
| GTCAGTGCTTCATAAGCAAT+GGG | + | chr7_2:74340160-74340179 | None:intergenic | 40.0% | |
| TGTCAGTGCTTCATAAGCAA+TGG | + | chr7_2:74340161-74340180 | None:intergenic | 40.0% | |
| ATACTCGAGCCCCATTATAT+GGG | - | chr7_2:74340493-74340512 | Msa1075940:CDS | 40.0% | |
| ACAGCGCTTCTATTTGAACT+GGG | - | chr7_2:74340587-74340606 | Msa1075940:intron | 40.0% | |
| ! | TTTTACACCAGGAGACTGTT+TGG | + | chr7_2:74340833-74340852 | None:intergenic | 40.0% |
| TAGCTTCTGACAGATGAACT+TGG | - | chr7_2:74340928-74340947 | Msa1075940:intron | 40.0% | |
| GGGGTATACCTGCATAATAA+TGG | + | chr7_2:74341019-74341038 | None:intergenic | 40.0% | |
| ACAAACTCAGTGAACGAAAG+GGG | + | chr7_2:74341038-74341057 | None:intergenic | 40.0% | |
| !! | CTTGTTACTTTCAAGGCCAA+AGG | - | chr7_2:74341091-74341110 | Msa1075940:intron | 40.0% |
| TTACGGAAAGAAGGTTTGGA+TGG | - | chr7_2:74341340-74341359 | Msa1075940:intron | 40.0% | |
| TACGGAAAGAAGGTTTGGAT+GGG | - | chr7_2:74341341-74341360 | Msa1075940:intron | 40.0% | |
| TCATTTGTTCTTTCAGCTGG+TGG | - | chr7_2:74341496-74341515 | Msa1075940:intron | 40.0% | |
| GTGGTGCAATGACTATTACA+TGG | - | chr7_2:74342003-74342022 | Msa1075940:CDS | 40.0% | |
| AAGATAACCAGAGCATGTGA+TGG | - | chr7_2:74342115-74342134 | Msa1075940:intron | 40.0% | |
| AGATAACCAGAGCATGTGAT+GGG | - | chr7_2:74342116-74342135 | Msa1075940:intron | 40.0% | |
| ! | ATTTTTCCCATCACATGCTC+TGG | + | chr7_2:74342125-74342144 | None:intergenic | 40.0% |
| AATGAAAAGACAGGTCACTG+AGG | + | chr7_2:74342206-74342225 | None:intergenic | 40.0% | |
| ! | AGTGACCTGTCTTTTCATTC+AGG | - | chr7_2:74342207-74342226 | Msa1075940:intron | 40.0% |
| AAACATCCAATGCGTGTCAT+CGG | + | chr7_2:74342393-74342412 | None:intergenic | 40.0% | |
| TATTTGCCTTCTTCAGGTCA+AGG | - | chr7_2:74342446-74342465 | Msa1075940:intron | 40.0% | |
| TAAGCTAGAGGCAACAGAAA+GGG | + | chr7_2:74342593-74342612 | None:intergenic | 40.0% | |
| TTAAGCTAGAGGCAACAGAA+AGG | + | chr7_2:74342594-74342613 | None:intergenic | 40.0% | |
| CATGTCTGGTATCTTGAGTT+TGG | - | chr7_2:74342634-74342653 | Msa1075940:intron | 40.0% | |
| GTATCTTGAGTTTGGCATGT+AGG | - | chr7_2:74342642-74342661 | Msa1075940:intron | 40.0% | |
| TATTCTAGCGTATGGTAGAC+AGG | + | chr7_2:74342869-74342888 | None:intergenic | 40.0% | |
| TAATATCTACTCCTTCGTCC+GGG | - | chr7_2:74342931-74342950 | Msa1075940:intron | 40.0% | |
| GATCTAAGGGTTAAAGGAGT+TGG | + | chr7_2:74342973-74342992 | None:intergenic | 40.0% | |
| CCTTATGTGCTTGCAGTATT+GGG | - | chr7_2:74343162-74343181 | Msa1075940:intron | 40.0% | |
| TCTTCACCATAGTCACTATG+TGG | - | chr7_2:74343187-74343206 | Msa1075940:intron | 40.0% | |
| CTTCACCATAGTCACTATGT+GGG | - | chr7_2:74343188-74343207 | Msa1075940:intron | 40.0% | |
| TTGTAGTAACTGAAGGTTGC+AGG | - | chr7_2:74343214-74343233 | Msa1075940:CDS | 40.0% | |
| GATAACAAGGTTCAACTGTC+TGG | + | chr7_2:74343306-74343325 | None:intergenic | 40.0% | |
| ! | ACAGAATCCACAGTTTTCTG+AGG | + | chr7_2:74343435-74343454 | None:intergenic | 40.0% |
| ! | TTTTGGCATCAGTACAGTCA+AGG | + | chr7_2:74343585-74343604 | None:intergenic | 40.0% |
| ! | CATGCCTCTCAATTTGAAAC+AGG | - | chr7_2:74343616-74343635 | Msa1075940:intron | 40.0% |
| GCAATCACCTATTACTGAAG+TGG | - | chr7_2:74343641-74343660 | Msa1075940:intron | 40.0% | |
| TATGGCTCCACTTCAGTAAT+AGG | + | chr7_2:74343651-74343670 | None:intergenic | 40.0% | |
| CCGACAAAACTTGAATCATG+AGG | + | chr7_2:74343803-74343822 | None:intergenic | 40.0% | |
| AACAACATGTAACTGGCAAC+AGG | + | chr7_2:74343879-74343898 | None:intergenic | 40.0% | |
| ! | TTTGCTTGGGTCACCTTTTT+GGG | - | chr7_2:74343971-74343990 | Msa1075940:intron | 40.0% |
| TTGAATCCTGACACTTCTGT+TGG | - | chr7_2:74344011-74344030 | Msa1075940:intron | 40.0% | |
| ! | TAATGCTAACTTGTGCCCTT+GGG | - | chr7_2:74344517-74344536 | Msa1075940:intron | 40.0% |
| TGAGACCATGGACTTGAATA+TGG | - | chr7_2:74344717-74344736 | Msa1075940:intron | 40.0% | |
| AGAATACCTCACAAAGGTTC+AGG | - | chr7_2:74345042-74345061 | Msa1075940:intron | 40.0% | |
| ! | CCTCATGAAAATTTTGCAGG+GGG | - | chr7_2:74345170-74345189 | Msa1075940:intron | 40.0% |
| ATCGAGAACACTTGAAGTAG+TGG | + | chr7_2:74345216-74345235 | None:intergenic | 40.0% | |
| TTAAATGGTCATACGCAGTC+AGG | - | chr7_2:74345348-74345367 | Msa1075940:intron | 40.0% | |
| !! | TTTGCTAGTATAGCGTTGAC+CGG | - | chr7_2:74345429-74345448 | Msa1075940:intron | 40.0% |
| GGGTGATGAAAACAGTAGAA+AGG | + | chr7_2:74345518-74345537 | None:intergenic | 40.0% | |
| !!! | GCCCTTGGTTTTATTTTTCC+AGG | - | chr7_2:74345741-74345760 | Msa1075940:intron | 40.0% |
| ! | GTTCAATAATGGAACCAACC+TGG | + | chr7_2:74345762-74345781 | None:intergenic | 40.0% |
| CAAGCATATAATGTGATGCC+AGG | - | chr7_2:74345796-74345815 | Msa1075940:CDS | 40.0% | |
| !! | TTCAAAGCATTGCTTAAGCC+TGG | + | chr7_2:74345817-74345836 | None:intergenic | 40.0% |
| !! | AGCAATGCTTTGAAACGCTA+TGG | - | chr7_2:74345823-74345842 | Msa1075940:CDS | 40.0% |
| GCAGCCCTGATCAATTATAT+TGG | + | chr7_2:74345915-74345934 | None:intergenic | 40.0% | |
| CCAAGCTTCTTGGAAATACT+AGG | + | chr7_2:74345937-74345956 | None:intergenic | 40.0% | |
| CCTAGTATTTCCAAGAAGCT+TGG | - | chr7_2:74345934-74345953 | Msa1075940:CDS | 40.0% | |
| !!! | CCAAGAAGCTTGGTTTTTTG+GGG | - | chr7_2:74345944-74345963 | Msa1075940:CDS | 40.0% |
| GCCTTTAATCTCTCCAGAAA+AGG | - | chr7_2:74346235-74346254 | Msa1075940:CDS | 40.0% | |
| !! | CCCTTTTCTGGAGAGATTAA+AGG | + | chr7_2:74346239-74346258 | None:intergenic | 40.0% |
| ATTACTAATGCCTACCACCA+AGG | + | chr7_2:74346262-74346281 | None:intergenic | 40.0% | |
| ! | GTGTTATAGGAGTGTGTTAG+AGG | + | chr7_2:74346316-74346335 | None:intergenic | 40.0% |
| !! | GGTTTGGGTTGGAAATTGTG+GGG | + | chr7_2:74339534-74339553 | None:intergenic | 45.0% |
| !! | GGGTTTGGGTTGGAAATTGT+GGG | + | chr7_2:74339535-74339554 | None:intergenic | 45.0% |
| !! | TGGGTTTGGGTTGGAAATTG+TGG | + | chr7_2:74339536-74339555 | None:intergenic | 45.0% |
| TGGAGAATCGTGTTGGGTTT+GGG | + | chr7_2:74339549-74339568 | None:intergenic | 45.0% | |
| CTTAATGTGCGGCGTATGAT+TGG | + | chr7_2:74339655-74339674 | None:intergenic | 45.0% | |
| AAGAGCGGAGTCTTAATGTG+CGG | + | chr7_2:74339666-74339685 | None:intergenic | 45.0% | |
| ! | CGAAGCAATTGTTGCTTCTC+CGG | - | chr7_2:74339725-74339744 | Msa1075940:three_prime_UTR | 45.0% |
| ! | GAAGCAATTGTTGCTTCTCC+GGG | - | chr7_2:74339726-74339745 | Msa1075940:three_prime_UTR | 45.0% |
| CATACTCGAGCCCCATTATA+TGG | - | chr7_2:74340492-74340511 | Msa1075940:CDS | 45.0% | |
| TACTCGAGCCCCATTATATG+GGG | - | chr7_2:74340494-74340513 | Msa1075940:CDS | 45.0% | |
| GACAGCGCTTCTATTTGAAC+TGG | - | chr7_2:74340586-74340605 | Msa1075940:intron | 45.0% | |
| TATTTGAACTGGGCCCTGTT+TGG | - | chr7_2:74340597-74340616 | Msa1075940:intron | 45.0% | |
| AGTTCTTCCAAACAGTCTCC+TGG | - | chr7_2:74340823-74340842 | Msa1075940:intron | 45.0% | |
| ! | AAGCTGTCTCTTTTCCAGCT+TGG | - | chr7_2:74340970-74340989 | Msa1075940:intron | 45.0% |
| GTCACTGGGCTTTGCAATTA+TGG | - | chr7_2:74341521-74341540 | Msa1075940:intron | 45.0% | |
| ! | TTTGATAGCATAAGCCGGGA+AGG | - | chr7_2:74341682-74341701 | Msa1075940:CDS | 45.0% |
| AGCCGGGAAGGTTAAAAAGA+TGG | - | chr7_2:74341694-74341713 | Msa1075940:CDS | 45.0% | |
| TAATCCCGGCAGATGTATCT+AGG | - | chr7_2:74341731-74341750 | Msa1075940:CDS | 45.0% | |
| GATGAACCTTGACCTGAAGA+AGG | + | chr7_2:74342455-74342474 | None:intergenic | 45.0% | |
| GTTAAAGGAGTTGGAAGTCC+TGG | + | chr7_2:74342964-74342983 | None:intergenic | 45.0% | |
| ! | TTGCAGTGAGTGCTGTTAGT+TGG | - | chr7_2:74343136-74343155 | Msa1075940:intron | 45.0% |
| GCCTTATGTGCTTGCAGTAT+TGG | - | chr7_2:74343161-74343180 | Msa1075940:intron | 45.0% | |
| CCCAATACTGCAAGCACATA+AGG | + | chr7_2:74343165-74343184 | None:intergenic | 45.0% | |
| AACTGCCCACATAGTGACTA+TGG | + | chr7_2:74343196-74343215 | None:intergenic | 45.0% | |
| TGGGCAGTTGTAGTAACTGA+AGG | - | chr7_2:74343207-74343226 | Msa1075940:intron | 45.0% | |
| ! | TCAAACTTGCTTCTGCTGCA+AGG | - | chr7_2:74343262-74343281 | Msa1075940:CDS | 45.0% |
| GCTCCCTGTTTCAAATTGAG+AGG | + | chr7_2:74343623-74343642 | None:intergenic | 45.0% | |
| ! | GATAGAGTGCTAGCATGCTA+TGG | + | chr7_2:74343828-74343847 | None:intergenic | 45.0% |
| ! | GTTTGCTTGGGTCACCTTTT+TGG | - | chr7_2:74343970-74343989 | Msa1075940:intron | 45.0% |
| !! | ACCTTTTTGGGAGCATGTGA+AGG | - | chr7_2:74343983-74344002 | Msa1075940:intron | 45.0% |
| TCCTTCACATGCTCCCAAAA+AGG | + | chr7_2:74343987-74344006 | None:intergenic | 45.0% | |
| AATTCGTCTGAAAAGGGCTC+CGG | - | chr7_2:74344247-74344266 | Msa1075940:intron | 45.0% | |
| ! | GTAATGCTAACTTGTGCCCT+TGG | - | chr7_2:74344516-74344535 | Msa1075940:intron | 45.0% |
| ! | AATGCTAACTTGTGCCCTTG+GGG | - | chr7_2:74344518-74344537 | Msa1075940:intron | 45.0% |
| ! | TTCACAGGCTAACTTGCCAA+AGG | - | chr7_2:74344952-74344971 | Msa1075940:intron | 45.0% |
| ACCAAATATTAAGCCCGGGA+AGG | - | chr7_2:74345012-74345031 | Msa1075940:intron | 45.0% | |
| TATTCTATCGTAGCCTTCCC+GGG | + | chr7_2:74345028-74345047 | None:intergenic | 45.0% | |
| GTATTCTATCGTAGCCTTCC+CGG | + | chr7_2:74345029-74345048 | None:intergenic | 45.0% | |
| !!! | GCGATTTTGGGGTCTGTTAT+GGG | - | chr7_2:74345072-74345091 | Msa1075940:intron | 45.0% |
| GTGGATGACCATCACATAAC+AGG | + | chr7_2:74345148-74345167 | None:intergenic | 45.0% | |
| ! | CCCCCTGCAAAATTTTCATG+AGG | + | chr7_2:74345173-74345192 | None:intergenic | 45.0% |
| TATTTACGGCGTACCAATGC+TGG | - | chr7_2:74345239-74345258 | Msa1075940:intron | 45.0% | |
| ACCAATGCTGGATTTGCCAT+TGG | - | chr7_2:74345251-74345270 | Msa1075940:intron | 45.0% | |
| ACCAATGGCAAATCCAGCAT+TGG | + | chr7_2:74345255-74345274 | None:intergenic | 45.0% | |
| TCATGCCAGCTGCATTTATC+TGG | - | chr7_2:74345379-74345398 | Msa1075940:intron | 45.0% | |
| CGAAAGCAGGAATGATAGCA+TGG | + | chr7_2:74345867-74345886 | None:intergenic | 45.0% | |
| CCCCAAAAAACCAAGCTTCT+TGG | + | chr7_2:74345947-74345966 | None:intergenic | 45.0% | |
| !! | AACTAAAAAAAAAAAAAAAA+AGG | + | chr7_2:74340008-74340027 | None:intergenic | 5.0% |
| GGGATGGAAGTGATAGAAGG+AGG | + | chr7_2:74339514-74339533 | None:intergenic | 50.0% | |
| GTGGGGATGGAAGTGATAGA+AGG | + | chr7_2:74339517-74339536 | None:intergenic | 50.0% | |
| ! | TGGGTTGGAAATTGTGGGGA+TGG | + | chr7_2:74339530-74339549 | None:intergenic | 50.0% |
| GAATCGTGTTGGGTTTGGGT+TGG | + | chr7_2:74339545-74339564 | None:intergenic | 50.0% | |
| GTGGAGAATCGTGTTGGGTT+TGG | + | chr7_2:74339550-74339569 | None:intergenic | 50.0% | |
| GAAATTCTGCGGTGAAGCGA+AGG | + | chr7_2:74339606-74339625 | None:intergenic | 50.0% | |
| GAGTCGGTCGGAGAAGTTAA+CGG | + | chr7_2:74339628-74339647 | None:intergenic | 50.0% | |
| !! | ATGATTGGTTCGGAGTCGGT+CGG | + | chr7_2:74339640-74339659 | None:intergenic | 50.0% |
| !! | GCGTATGATTGGTTCGGAGT+CGG | + | chr7_2:74339644-74339663 | None:intergenic | 50.0% |
| ! | TGTGCGGCGTATGATTGGTT+CGG | + | chr7_2:74339650-74339669 | None:intergenic | 50.0% |
| CCATCGCTACCATGAGTTTC+CGG | + | chr7_2:74339705-74339724 | None:intergenic | 50.0% | |
| GGTTTCAACTCTACGGTTCC+CGG | + | chr7_2:74339747-74339766 | None:intergenic | 50.0% | |
| GTGTCTGACACCAACACGTA+TGG | + | chr7_2:74340255-74340274 | None:intergenic | 50.0% | |
| AAGAGACAGCTTCAGCTCAG+AGG | + | chr7_2:74340962-74340981 | None:intergenic | 50.0% | |
| TCTGAGGACTGTTTCCAAGC+TGG | + | chr7_2:74340987-74341006 | None:intergenic | 50.0% | |
| ! | TTTCAGCTGGTGGATGTCAC+TGG | - | chr7_2:74341506-74341525 | Msa1075940:intron | 50.0% |
| ! | TTCAGCTGGTGGATGTCACT+GGG | - | chr7_2:74341507-74341526 | Msa1075940:intron | 50.0% |
| ACTGCCTAGATACATCTGCC+GGG | + | chr7_2:74341738-74341757 | None:intergenic | 50.0% | |
| GACTGCCTAGATACATCTGC+CGG | + | chr7_2:74341739-74341758 | None:intergenic | 50.0% | |
| GTCACTGAGGAACTTCTGCA+TGG | + | chr7_2:74342193-74342212 | None:intergenic | 50.0% | |
| ! | CAGTGAGTGCTGTTAGTTGG+TGG | - | chr7_2:74343139-74343158 | Msa1075940:intron | 50.0% |
| AGGTACGAGGTGGTCAAAAC+AGG | + | chr7_2:74343708-74343727 | None:intergenic | 50.0% | |
| TTTGACCACCTCGTACCTCT+TGG | - | chr7_2:74343710-74343729 | Msa1075940:CDS | 50.0% | |
| !! | TCAGCACCAACAGAAGTGTC+AGG | + | chr7_2:74344020-74344039 | None:intergenic | 50.0% |
| !! | TTCTGTTGGTGCTGAACCGT+GGG | - | chr7_2:74344025-74344044 | Msa1075940:intron | 50.0% |
| GCCTTCCCGGGCTTAATATT+TGG | + | chr7_2:74345016-74345035 | None:intergenic | 50.0% | |
| TGGAAGCCTGAACCTTTGTG+AGG | + | chr7_2:74345051-74345070 | None:intergenic | 50.0% | |
| ! | TTCAGGCTTCCACGCGATTT+TGG | - | chr7_2:74345059-74345078 | Msa1075940:intron | 50.0% |
| ! | TCAGGCTTCCACGCGATTTT+GGG | - | chr7_2:74345060-74345079 | Msa1075940:intron | 50.0% |
| TAACAGACCCCAAAATCGCG+TGG | + | chr7_2:74345071-74345090 | None:intergenic | 50.0% | |
| !!! | CGCGATTTTGGGGTCTGTTA+TGG | - | chr7_2:74345071-74345090 | Msa1075940:intron | 50.0% |
| GCAAGCCAGATAAATGCAGC+TGG | + | chr7_2:74345387-74345406 | None:intergenic | 50.0% | |
| CAGTACTACCAGTAGGGTAC+TGG | + | chr7_2:74345484-74345503 | None:intergenic | 50.0% | |
| GTAAGGATGCTGACGAAAGC+AGG | + | chr7_2:74345880-74345899 | None:intergenic | 50.0% | |
| ATCTCTCCAGAAAAGGGCCT+TGG | - | chr7_2:74346242-74346261 | Msa1075940:CDS | 50.0% | |
| TGCGACCCTAGCATTTCTCT+TGG | + | chr7_2:74346292-74346311 | None:intergenic | 50.0% | |
| GTTGCAGTTGCTTCCATGGC+TGG | + | chr7_2:74339483-74339502 | None:intergenic | 55.0% | |
| TCGCGTTGCAGTTGCTTCCA+TGG | + | chr7_2:74339487-74339506 | None:intergenic | 55.0% | |
| ! | CCGGAAACTCATGGTAGCGA+TGG | - | chr7_2:74339702-74339721 | Msa1075940:three_prime_UTR | 55.0% |
| GACACACCGATGACACGCAT+TGG | - | chr7_2:74342384-74342403 | Msa1075940:intron | 55.0% | |
| GCTAGAGGCAACAGAAAGGG+AGG | + | chr7_2:74342590-74342609 | None:intergenic | 55.0% | |
| GGAAGTCCTGGCTTCAAACC+CGG | + | chr7_2:74342952-74342971 | None:intergenic | 55.0% | |
| GGGGGGGATCTAAGGGTTAA+AGG | + | chr7_2:74342979-74342998 | None:intergenic | 55.0% | |
| AAAACAGGCTGCATCCCTGC+TGG | + | chr7_2:74343693-74343712 | None:intergenic | 55.0% | |
| ! | AAAGGCCAAGAGGTACGAGG+TGG | + | chr7_2:74343718-74343737 | None:intergenic | 55.0% |
| ! | TGGAAAGGCCAAGAGGTACG+AGG | + | chr7_2:74343721-74343740 | None:intergenic | 55.0% |
| CGATGCTTGGAAAGGCCAAG+AGG | + | chr7_2:74343728-74343747 | None:intergenic | 55.0% | |
| ! | CCTTTCCAAGCATCGTCGCT+GGG | - | chr7_2:74343733-74343752 | Msa1075940:CDS | 55.0% |
| ACATACCCAGCGACGATGCT+TGG | + | chr7_2:74343741-74343760 | None:intergenic | 55.0% | |
| !! | CTTCTGTTGGTGCTGAACCG+TGG | - | chr7_2:74344024-74344043 | Msa1075940:intron | 55.0% |
| ! | CAGGCTTCCACGCGATTTTG+GGG | - | chr7_2:74345061-74345080 | Msa1075940:intron | 55.0% |
| GCATCTCACCAGTACCCTAC+TGG | - | chr7_2:74345473-74345492 | Msa1075940:intron | 55.0% | |
| CAGTTTCACTGAGCAGCCCT+TGG | - | chr7_2:74345726-74345745 | Msa1075940:intron | 55.0% | |
| TCTCCAGAAAAGGGCCTTGG+TGG | - | chr7_2:74346245-74346264 | Msa1075940:CDS | 55.0% | |
| ! | CTACCACCAAGGCCCTTTTC+TGG | + | chr7_2:74346251-74346270 | None:intergenic | 55.0% |
| ! | CAGAAAAGGGCCTTGGTGGT+AGG | - | chr7_2:74346249-74346268 | Msa1075940:exon | 55.0% |
| ACTGCTGCGAAGTCCAGCCA+TGG | - | chr7_2:74339467-74339486 | Msa1075940:three_prime_UTR | 60.0% | |
| CTGGCTTCAAACCCGGACGA+AGG | + | chr7_2:74342945-74342964 | None:intergenic | 60.0% | |
| ! | CTTCGTCCGGGTTTGAAGCC+AGG | - | chr7_2:74342943-74342962 | Msa1075940:intron | 60.0% |
| TGTGTGTGTGTGTGTGGGGG+GGG | + | chr7_2:74343002-74343021 | None:intergenic | 60.0% | |
| GTGTGTGTGTGTGTGTGGGG+GGG | + | chr7_2:74343003-74343022 | None:intergenic | 60.0% | |
| CGTGTGTGTGTGTGTGTGGG+GGG | + | chr7_2:74343004-74343023 | None:intergenic | 60.0% | |
| GCGTGTGTGTGTGTGTGTGG+GGG | + | chr7_2:74343005-74343024 | None:intergenic | 60.0% | |
| CGCGTGTGTGTGTGTGTGTG+GGG | + | chr7_2:74343006-74343025 | None:intergenic | 60.0% | |
| GCGCGTGTGTGTGTGTGTGT+GGG | + | chr7_2:74343007-74343026 | None:intergenic | 60.0% | |
| ! | GCCTTTCCAAGCATCGTCGC+TGG | - | chr7_2:74343732-74343751 | Msa1075940:CDS | 60.0% |
| CCCAGCGACGATGCTTGGAA+AGG | + | chr7_2:74343736-74343755 | None:intergenic | 60.0% | |
| TGTGTGTGTGTGTGGGGGGG+GGG | + | chr7_2:74343000-74343019 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | + | chr7_2:74343001-74343020 | None:intergenic | 65.0% | |
| CGCGCGTGTGTGTGTGTGTG+TGG | + | chr7_2:74343008-74343027 | None:intergenic | 65.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | + | chr7_2:74342998-74343017 | None:intergenic | 70.0% | |
| GTGTGTGTGTGTGGGGGGGG+GGG | + | chr7_2:74342999-74343018 | None:intergenic | 70.0% | |
| GGGGGGGGGGGGGGATCTAA+GGG | + | chr7_2:74342986-74343005 | None:intergenic | 75.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | + | chr7_2:74342996-74343015 | None:intergenic | 75.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | + | chr7_2:74342997-74343016 | None:intergenic | 75.0% | |
| ! | GGGGGGGGGGGGGGGATCTA+AGG | + | chr7_2:74342987-74343006 | None:intergenic | 80.0% |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | + | chr7_2:74342995-74343014 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74339411 | 74346342 | 74339411 | ID=Msa1075940;Name=Msa1075940 |
| chr7_2 | mRNA | 74339411 | 74346342 | 74339411 | ID=Msa1075940-mRNA-1;Parent=Msa1075940;Name=Msa1075940-mRNA-1;_AED=0.07;_eAED=0.07;_QI=75|0.9|0.90|1|0.9|0.90|11|490|507 |
| chr7_2 | exon | 74339411 | 74339990 | 74339411 | ID=Msa1075940-mRNA-1:exon:17491;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74340458 | 74340564 | 74340458 | ID=Msa1075940-mRNA-1:exon:17490;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74341649 | 74341782 | 74341649 | ID=Msa1075940-mRNA-1:exon:17489;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74341999 | 74342115 | 74341999 | ID=Msa1075940-mRNA-1:exon:17488;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74342470 | 74342611 | 74342470 | ID=Msa1075940-mRNA-1:exon:17487;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74343208 | 74343291 | 74343208 | ID=Msa1075940-mRNA-1:exon:17486;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74343697 | 74343788 | 74343697 | ID=Msa1075940-mRNA-1:exon:17485;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74344152 | 74344241 | 74344152 | ID=Msa1075940-mRNA-1:exon:17484;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74344367 | 74344446 | 74344367 | ID=Msa1075940-mRNA-1:exon:17483;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74344724 | 74344812 | 74344724 | ID=Msa1075940-mRNA-1:exon:17482;Parent=Msa1075940-mRNA-1 |
| chr7_2 | exon | 74345769 | 74346342 | 74345769 | ID=Msa1075940-mRNA-1:exon:17481;Parent=Msa1075940-mRNA-1 |
| chr7_2 | five_prime_UTR | 74346268 | 74346342 | 74346268 | ID=Msa1075940-mRNA-1:five_prime_utr;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74345769 | 74346267 | 74345769 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74344724 | 74344812 | 74344724 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74344367 | 74344446 | 74344367 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74344152 | 74344241 | 74344152 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74343697 | 74343788 | 74343697 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74343208 | 74343291 | 74343208 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74342470 | 74342611 | 74342470 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74341999 | 74342115 | 74341999 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74341649 | 74341782 | 74341649 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74340458 | 74340564 | 74340458 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | CDS | 74339901 | 74339990 | 74339901 | ID=Msa1075940-mRNA-1:cds;Parent=Msa1075940-mRNA-1 |
| chr7_2 | three_prime_UTR | 74339411 | 74339900 | 74339411 | ID=Msa1075940-mRNA-1:three_prime_utr;Parent=Msa1075940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
