AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1130730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130730 MtrunA17_Chr7g0276581 88.928 569 37 8 1 555 1 557 0.0 944
Msa1130730 MtrunA17_Chr8g0360611 39.355 155 87 1 80 227 60 214 3.88e-28 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130730 AT1G53800.2 47.421 504 196 12 86 552 99 570 5.24e-132 397
Msa1130730 AT1G53800.3 47.421 504 196 12 86 552 99 570 5.24e-132 397
Msa1130730 AT1G53800.1 47.421 504 196 12 86 552 95 566 6.21e-132 396
Msa1130730 AT1G53800.4 43.527 448 184 12 142 552 1 416 5.31e-97 301
Msa1130730 AT1G53250.1 42.553 141 79 1 85 225 93 231 1.72e-26 111

Find 150 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGATCGGCTTAACAATTT+TGG 0.147374 7_3:-82938684 None:intergenic
TACAAGTTCTCTGAAGATTT+TGG 0.168425 7_3:+82939399 Msa1130730:CDS
AGCTTCAGCTATAAGCTTTC+TGG 0.177934 7_3:-82939214 None:intergenic
CACTCTTGAAGAAACATTTA+TGG 0.179927 7_3:-82939754 None:intergenic
CCTTCTCTGTTCAGGGGACT+TGG 0.194217 7_3:-82937349 None:intergenic
CTCTTTAGCTAAAGCTATTT+TGG 0.200557 7_3:-82939846 None:intergenic
CTATAACTGGGCCTTGTTCT+AGG 0.249045 7_3:-82938590 None:intergenic
CAGAAGCTATTGCTGCAAAA+TGG 0.252169 7_3:+82937379 Msa1130730:CDS
ATGTATCTATATTAGTTTAT+AGG 0.252410 7_3:+82939872 Msa1130730:three_prime_UTR
ATGGGCAGTCTTGGTTTATC+TGG 0.254259 7_3:-82939509 None:intergenic
AAGAAAATCCCCTGCCTATA+AGG 0.268562 7_3:+82938715 Msa1130730:CDS
TCAGAAATGGCCCAAGTAAA+TGG 0.271344 7_3:+82939351 Msa1130730:CDS
GTTTCCCTTTGCTGATTTGA+TGG 0.273722 7_3:-82939528 None:intergenic
GGAGAGTTGTGCACTATAAC+TGG 0.300149 7_3:-82938603 None:intergenic
AAGTGATTGTTGTTGAATTT+AGG 0.317748 7_3:-82936296 None:intergenic
TTTGTACTATGTTTGAAAAC+TGG 0.330107 7_3:-82939704 None:intergenic
CGTTATCCTCTTCTCTGGTT+TGG 0.334404 7_3:+82935846 Msa1130730:five_prime_UTR
AGAATTTCTAAAGCTAATAA+AGG 0.335079 7_3:+82936419 Msa1130730:CDS
TCCCTGGAGAGACCAGTTAA+TGG 0.338872 7_3:+82939429 Msa1130730:CDS
TTGGGTGCTCTGTTGCTAAC+TGG 0.340197 7_3:-82937330 None:intergenic
CTGTTCATCCAAGGTTTCAT+AGG 0.344649 7_3:-82937253 None:intergenic
TGCTTTCTTCCTTTGTTCCA+TGG 0.347511 7_3:-82936449 None:intergenic
CTTGTAATTGAGTGTGGATA+TGG 0.349317 7_3:-82936167 None:intergenic
CCATTGGTTAGGTGAAGTTC+TGG 0.357997 7_3:-82939456 None:intergenic
TTGTATGGCTTGAGTTTGTC+TGG 0.361484 7_3:-82938804 None:intergenic
AAAATGAAGTTGACTAATCT+TGG 0.365767 7_3:+82936951 Msa1130730:CDS
ATTCACCAAAGGATCCTTAT+AGG 0.367988 7_3:-82938729 None:intergenic
GGTCTACCTTGCTTGTTGTA+TGG 0.369499 7_3:-82938819 None:intergenic
GTGTCTTTCTCTTTATTATC+CGG 0.385269 7_3:-82939984 None:intergenic
GCTGATTTGATGGGCAGTCT+TGG 0.385985 7_3:-82939518 None:intergenic
TAGATTGTGTTTCATCTTCA+AGG 0.386322 7_3:-82939596 None:intergenic
CCCTGCCTATAAGGATCCTT+TGG 0.391549 7_3:+82938724 Msa1130730:CDS
CAGAAACTTTGCAGAAGATC+AGG 0.392693 7_3:+82936595 Msa1130730:intron
TAATTATGATGAAGCATAAT+CGG 0.403362 7_3:-82936341 None:intergenic
CGCCATTAACTGGTCTCTCC+AGG 0.404361 7_3:-82939431 None:intergenic
GTTCTTTATCATCTCTAGCT+TGG 0.409338 7_3:-82938753 None:intergenic
AGCGAACGAGCGAGAGTAAG+AGG 0.409532 7_3:-82935974 None:intergenic
GCATCTAGGCAAGGCTTTGT+TGG 0.411974 7_3:+82937207 Msa1130730:CDS
ATGTTGTGCGTCCATTTACT+TGG 0.417420 7_3:-82939362 None:intergenic
TAGGCAAGGCTTTGTTGGTC+AGG 0.417991 7_3:+82937212 Msa1130730:CDS
CTTCTCTGTTCAGGGGACTT+GGG 0.418289 7_3:-82937348 None:intergenic
CGCAGCAACCTCCAGTGCCT+TGG 0.418723 7_3:-82939154 None:intergenic
TGGCTGGTCAGCTAATGATT+TGG 0.428162 7_3:-82939798 None:intergenic
AGTTCTGGAACGCCATTAAC+TGG 0.430767 7_3:-82939441 None:intergenic
ATTTAATTGCAGAAGCATCT+AGG 0.431183 7_3:+82937193 Msa1130730:CDS
TGAGAAAGCGGCCAAGGCAC+TGG 0.455747 7_3:+82939143 Msa1130730:CDS
TTTCCCTTTGCTGATTTGAT+GGG 0.456711 7_3:-82939527 None:intergenic
TAGTTTGAGCGAGGTCAATC+AGG 0.457771 7_3:+82939296 Msa1130730:CDS
TCCATGTCTACCTAGACAAT+TGG 0.461480 7_3:-82939821 None:intergenic
TTCAGTAGAATGATGATACT+TGG 0.462498 7_3:-82938561 None:intergenic
AGTTCGAAACCATTCAGAAA+TGG 0.466397 7_3:+82939338 Msa1130730:CDS
AGCAACGTTATCCTCTTCTC+TGG 0.467008 7_3:+82935841 Msa1130730:five_prime_UTR
TTACTTGGGCCATTTCTGAA+TGG 0.473231 7_3:-82939347 None:intergenic
TCAGCAAAGGGAAACAGAAC+AGG 0.475127 7_3:+82939536 Msa1130730:CDS
TGCCGCTACTGCTGCTACGA+TGG 0.479000 7_3:+82936262 Msa1130730:CDS
ACCAAAGGATCCTTATAGGC+AGG 0.479827 7_3:-82938725 None:intergenic
AAGAAGCACATCCATTGGTT+AGG 0.484112 7_3:-82939467 None:intergenic
AGAAGCTATTGCTGCAAAAT+GGG 0.486163 7_3:+82937380 Msa1130730:CDS
GAGTGTGGATATGGTGGTAA+TGG 0.488360 7_3:-82936158 None:intergenic
TCAGAGAACTTGTAGAAGCT+TGG 0.494752 7_3:-82939390 None:intergenic
ATTAGAGAAGACTGAGCAAT+GGG 0.497339 7_3:-82939186 None:intergenic
TGTTTGTTTGTAACGAAGGA+AGG 0.498980 7_3:+82935809 Msa1130730:five_prime_UTR
TTGCAGAGCAGACTCTTTCA+CGG 0.513414 7_3:-82938535 None:intergenic
CGTAGCAGCAGTAGCGGCAA+CGG 0.513506 7_3:-82936258 None:intergenic
TAATGGTGGGTGGGATTCGA+TGG 0.514499 7_3:-82935872 None:intergenic
CTTCTTCTTGTAATTGAGTG+TGG 0.514520 7_3:-82936173 None:intergenic
TACGAACCAATCAAAGGCAT+GGG 0.516309 7_3:-82936018 None:intergenic
TTGGTCAGGAAGAGCTGCAA+TGG 0.516970 7_3:+82937226 Msa1130730:CDS
AGATTGTGTTTCATCTTCAA+GGG 0.528242 7_3:-82939595 None:intergenic
AGATGACTGTAGTGTCCCTT+CGG 0.529223 7_3:+82939272 Msa1130730:CDS
CTGCTTAAGCTGTTCATCCA+AGG 0.529761 7_3:-82937262 None:intergenic
TGTAACGAAGGAAGGAAGGA+AGG 0.529864 7_3:+82935817 Msa1130730:five_prime_UTR
AAAGGAAGAAAGCACAGTCC+TGG 0.530236 7_3:+82936458 Msa1130730:CDS
TGACGCAGATAAATGAATGA+AGG 0.530285 7_3:-82935902 None:intergenic
TGTTGAAGAAAGGAAACAAA+TGG 0.535795 7_3:+82937299 Msa1130730:CDS
AACTTCTCGCTCTCATCAAG+TGG 0.537218 7_3:-82936386 None:intergenic
ATCTGGCTATTCAAACTGAA+AGG 0.537699 7_3:-82939492 None:intergenic
CTGCCCATCAAATCAGCAAA+GGG 0.542744 7_3:+82939524 Msa1130730:CDS
TAGTTGTTTGTTTGTAACGA+AGG 0.545523 7_3:+82935805 Msa1130730:five_prime_UTR
AATGAGGCGTGGAAGGAAGA+TGG 0.548441 7_3:+82937140 Msa1130730:CDS
ATGTCTACCTAGACAATTGG+TGG 0.553934 7_3:-82939818 None:intergenic
ATGGAATTCCTATGAAACCT+TGG 0.554470 7_3:+82937245 Msa1130730:CDS
AGTATCATCATTCTACTGAA+AGG 0.554917 7_3:+82938564 Msa1130730:CDS
TGTTGTGCGTCCATTTACTT+GGG 0.559138 7_3:-82939361 None:intergenic
CTACCTAGACAATTGGTGGC+TGG 0.559723 7_3:-82939814 None:intergenic
TATGGGAAATGAGGCGTGGA+AGG 0.561411 7_3:+82937133 Msa1130730:CDS
ATTCAACAACAATCACTTGG+AGG 0.563513 7_3:+82936301 Msa1130730:CDS
GCAACGGCTTTAATGAGGAA+TGG 0.563520 7_3:-82936242 None:intergenic
TGAAGCTGAGAAAGCGGCCA+AGG 0.564202 7_3:+82939137 Msa1130730:CDS
TGAGAAAGCTATGGGAAATG+AGG 0.567042 7_3:+82937124 Msa1130730:CDS
GCGTGGAAGGAAGATGGTGC+AGG 0.567129 7_3:+82937146 Msa1130730:CDS
CTTGGATGAACAGCTTAAGC+AGG 0.568138 7_3:+82937263 Msa1130730:CDS
CTACTACTAGGAGGTGGAGG+AGG 0.571104 7_3:+82936216 Msa1130730:CDS
CTAATAAAGGAAACACTCCA+TGG 0.572287 7_3:+82936432 Msa1130730:CDS
CCTCGCTATGCAGAATCCTA+AGG 0.572868 7_3:+82936629 Msa1130730:CDS
TGTTTGTAACGAAGGAAGGA+AGG 0.574556 7_3:+82935813 Msa1130730:five_prime_UTR
CAAGGCACTGGAGGTTGCTG+CGG 0.574810 7_3:+82939155 Msa1130730:CDS
TGCTGGAGTGAGAAAGCTAT+GGG 0.576084 7_3:+82937116 Msa1130730:CDS
GGTTGCTCAGTGTTGAAGAA+AGG 0.576460 7_3:+82937289 Msa1130730:CDS
CCAAGTCCCCTGAACAGAGA+AGG 0.577586 7_3:+82937349 Msa1130730:CDS
CCAAAGGATCCTTATAGGCA+GGG 0.578428 7_3:-82938724 None:intergenic
TGACCAGCCACCAATTGTCT+AGG 0.578871 7_3:+82939811 Msa1130730:three_prime_UTR
TGATGAAGCATAATCGGATG+AGG 0.579917 7_3:-82936335 None:intergenic
CTACTACTACTAGGAGGTGG+AGG 0.580642 7_3:+82936213 Msa1130730:CDS
TAAAAGTACGAACCAATCAA+AGG 0.580810 7_3:-82936024 None:intergenic
CAAAGGATCCTTATAGGCAG+GGG 0.581887 7_3:-82938723 None:intergenic
GTGCTGGAGTGAGAAAGCTA+TGG 0.583096 7_3:+82937115 Msa1130730:CDS
AGAAACTTTGCAGAAGATCA+GGG 0.584197 7_3:+82936596 Msa1130730:intron
ATTGAAGACACTCGCCCACC+CGG 0.584356 7_3:-82940006 None:intergenic
AGGAGAGTTGCTGCTTTGAG+TGG 0.585215 7_3:+82937166 Msa1130730:CDS
GTACGAACCAATCAAAGGCA+TGG 0.587630 7_3:-82936019 None:intergenic
GATAATAAAGAGAAAGACAC+CGG 0.589588 7_3:+82939987 Msa1130730:three_prime_UTR
AGGTAAAGAAGCACATCCAT+TGG 0.589919 7_3:-82939472 None:intergenic
AACCATCGTAGCAGCAGTAG+CGG 0.590920 7_3:-82936264 None:intergenic
TTACTACTACTACTAGGAGG+TGG 0.592223 7_3:+82936210 Msa1130730:CDS
ACCAATTGTCTAGGTAGACA+TGG 0.592789 7_3:+82939820 Msa1130730:three_prime_UTR
TAAATTCAACAACAATCACT+TGG 0.594861 7_3:+82936298 Msa1130730:CDS
TAGCGGCAACGGCTTTAATG+AGG 0.595071 7_3:-82936247 None:intergenic
GCCATTAACTGGTCTCTCCA+GGG 0.596953 7_3:-82939430 None:intergenic
ATTGCAGAAGCATCTAGGCA+AGG 0.597944 7_3:+82937198 Msa1130730:CDS
ACCTCGCTCAAACTAACCGA+AGG 0.599556 7_3:-82939288 None:intergenic
GAGAGTTGTGCACTATAACT+GGG 0.604300 7_3:-82938602 None:intergenic
CCCTTCGGTTAGTTTGAGCG+AGG 0.606707 7_3:+82939287 Msa1130730:CDS
TATTAGAGAAGACTGAGCAA+TGG 0.606763 7_3:-82939187 None:intergenic
AACAAATGCACATTTACTGA+GGG 0.607574 7_3:+82936133 Msa1130730:CDS
GGAAACACTCCATGGAACAA+AGG 0.613565 7_3:+82936440 Msa1130730:CDS
ACTGCCCATCAAATCAGCAA+AGG 0.614011 7_3:+82939523 Msa1130730:CDS
TGATTGTTGTTGAATTTAGG+TGG 0.614725 7_3:-82936293 None:intergenic
TGGAAACCAAACCAGAGAAG+AGG 0.617338 7_3:-82935852 None:intergenic
ATGAACAGCTTAAGCAGGAG+TGG 0.618338 7_3:+82937268 Msa1130730:CDS
GATTGCTGAAGCTGAGAAAG+CGG 0.618657 7_3:+82939131 Msa1130730:CDS
TAACAAATGCACATTTACTG+AGG 0.618916 7_3:+82936132 Msa1130730:CDS
CAGAGCACAAAGAGCTTCCG+CGG 0.621196 7_3:+82938778 Msa1130730:CDS
TTGAGTTTGTCTGGTATCCG+CGG 0.621664 7_3:-82938795 None:intergenic
CTCAAGCCATACAACAAGCA+AGG 0.624160 7_3:+82938813 Msa1130730:CDS
CTGAAAGGAAACCTAGAACA+AGG 0.624217 7_3:+82938579 Msa1130730:CDS
CCAGAACTTCACCTAACCAA+TGG 0.625712 7_3:+82939456 Msa1130730:CDS
AAGAAAGGAAACAAATGGCG+AGG 0.628017 7_3:+82937304 Msa1130730:CDS
GTAATTGAGTGTGGATATGG+TGG 0.636582 7_3:-82936164 None:intergenic
GAAAGCGGCCAAGGCACTGG+AGG 0.643194 7_3:+82939146 Msa1130730:CDS
ACGAACCAATCAAAGGCATG+GGG 0.643505 7_3:-82936017 None:intergenic
AGAAAGGAAACAAATGGCGA+GGG 0.644627 7_3:+82937305 Msa1130730:CDS
TCTAGCTTGGAATTCACCAA+AGG 0.650621 7_3:-82938740 None:intergenic
AAGCTATGGGAAATGAGGCG+TGG 0.656388 7_3:+82937129 Msa1130730:CDS
CCTCGCTCAAACTAACCGAA+GGG 0.662267 7_3:-82939287 None:intergenic
CCTTAGGATTCTGCATAGCG+AGG 0.673579 7_3:-82936629 None:intergenic
TAAAGAGAAAGACACCGGGT+GGG 0.687372 7_3:+82939992 Msa1130730:three_prime_UTR
ATAAAGAGAAAGACACCGGG+TGG 0.689303 7_3:+82939991 Msa1130730:three_prime_UTR
ATAATAAAGAGAAAGACACC+GGG 0.719692 7_3:+82939988 Msa1130730:three_prime_UTR
CGAACCAATCAAAGGCATGG+GGG 0.723915 7_3:-82936016 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATATTAACTTTTGTTT+TGG + chr7_3:82937944-82937963 Msa1130730:intron 10.0%
!! GTTATTAAAGAAATTATATT+AGG - chr7_3:82938023-82938042 None:intergenic 10.0%
!!! TTATTTTAATTGATTTCTTT+TGG + chr7_3:82938853-82938872 Msa1130730:intron 10.0%
!!! AAATACTAAATTTCAATTTT+CGG - chr7_3:82938896-82938915 None:intergenic 10.0%
!! ACATTAAAAAGTAACAAAAA+TGG - chr7_3:82937011-82937030 None:intergenic 15.0%
!!! TATAAATTACATGTTTTAGA+TGG + chr7_3:82938203-82938222 Msa1130730:intron 15.0%
!! TATTTCATGAAAATATATAC+AGG - chr7_3:82939090-82939109 None:intergenic 15.0%
!!! ATGTATCTATATTAGTTTAT+AGG + chr7_3:82939872-82939891 Msa1130730:three_prime_UTR 15.0%
!! TAATTATGATGAAGCATAAT+CGG - chr7_3:82936344-82936363 None:intergenic 20.0%
!!! AGAATTTCTAAAGCTAATAA+AGG + chr7_3:82936419-82936438 Msa1130730:CDS 20.0%
!! TCTTAAATCTTAAAACAATG+AGG + chr7_3:82936698-82936717 Msa1130730:intron 20.0%
!! TTAAGATTCAAAGAAAGAAA+AGG + chr7_3:82936779-82936798 Msa1130730:intron 20.0%
!! TAAGATTCAAAGAAAGAAAA+GGG + chr7_3:82936780-82936799 Msa1130730:intron 20.0%
!!! ATGTGTTTCTAGTTAATAAT+GGG - chr7_3:82937571-82937590 None:intergenic 20.0%
!! ATCAATAGTTATGTCATTAT+TGG - chr7_3:82937677-82937696 None:intergenic 20.0%
!! AAATTATATTAGGCACTAAT+TGG - chr7_3:82938013-82938032 None:intergenic 20.0%
!! TAATTATACTAGGCATTTAT+TGG - chr7_3:82938053-82938072 None:intergenic 20.0%
!! CCTAGTATAATTAAAAAGTT+GGG + chr7_3:82938060-82938079 Msa1130730:intron 20.0%
!! ATATAAAAGAATTTACACCT+CGG - chr7_3:82938094-82938113 None:intergenic 20.0%
!! TTGTATAAACTATAAAAGAG+AGG - chr7_3:82938133-82938152 None:intergenic 20.0%
!!! CTCTTTTATAGTTTATACAA+AGG + chr7_3:82938133-82938152 Msa1130730:intron 20.0%
!!! TTTTCTGTAGGATTTTATTT+AGG + chr7_3:82938444-82938463 Msa1130730:intron 20.0%
!!! TTTCTGTAGGATTTTATTTA+GGG + chr7_3:82938445-82938464 Msa1130730:intron 20.0%
!! GATTTAACAGAAAAATATGT+TGG - chr7_3:82938508-82938527 None:intergenic 20.0%
!!! ACATATTTTTCTGTTAAATC+AGG + chr7_3:82938508-82938527 Msa1130730:CDS 20.0%
!!! AGATTAAATCATAAAAGTAC+AGG + chr7_3:82939030-82939049 Msa1130730:intron 20.0%
!!! GATATTATTTTCTATTGTGT+TGG + chr7_3:82939940-82939959 Msa1130730:three_prime_UTR 20.0%
!! TCTTTCTTTTTCTATTCACT+CGG - chr7_3:82935772-82935791 None:intergenic 25.0%
!!! TGAATGAAGGATTTTGATAA+TGG - chr7_3:82935892-82935911 None:intergenic 25.0%
!! AAGTGATTGTTGTTGAATTT+AGG - chr7_3:82936299-82936318 None:intergenic 25.0%
! TAAATTCAACAACAATCACT+TGG + chr7_3:82936298-82936317 Msa1130730:CDS 25.0%
! AGGAAGAAAAAGAAAAGAAT+TGG - chr7_3:82936906-82936925 None:intergenic 25.0%
! AAAATGAAGTTGACTAATCT+TGG + chr7_3:82936951-82936970 Msa1130730:CDS 25.0%
! AAAAGTAACAAAAATGGTGA+TGG - chr7_3:82937005-82937024 None:intergenic 25.0%
! ATGTTAACATATACACTTAC+GGG - chr7_3:82937411-82937430 None:intergenic 25.0%
! GATGTTAACATATACACTTA+CGG - chr7_3:82937412-82937431 None:intergenic 25.0%
!!! CATGTGTTTCTAGTTAATAA+TGG - chr7_3:82937572-82937591 None:intergenic 25.0%
!!! TTTCCAGTTTTGTAAAAGAA+TGG + chr7_3:82937716-82937735 Msa1130730:intron 25.0%
! CGTATTTGCAAATTAAAAAC+AGG + chr7_3:82937829-82937848 Msa1130730:intron 25.0%
! ACTTAGATCAATTAGAATAG+AGG + chr7_3:82937901-82937920 Msa1130730:intron 25.0%
! GAAAGAATATCAACATAGAA+AGG - chr7_3:82937978-82937997 None:intergenic 25.0%
! GCCTAGTATAATTAAAAAGT+TGG + chr7_3:82938059-82938078 Msa1130730:intron 25.0%
!!! CCCAACTTTTTAATTATACT+AGG - chr7_3:82938063-82938082 None:intergenic 25.0%
! TAATTAAAAAGTTGGGTCAA+AGG + chr7_3:82938067-82938086 Msa1130730:intron 25.0%
! TATAAAAGAATTTACACCTC+GGG - chr7_3:82938093-82938112 None:intergenic 25.0%
! TGACTATTCTGATATTCATT+AGG - chr7_3:82938237-82938256 None:intergenic 25.0%
!! CAACATCCATTTTCTATATA+GGG - chr7_3:82938266-82938285 None:intergenic 25.0%
!! TCAACATCCATTTTCTATAT+AGG - chr7_3:82938267-82938286 None:intergenic 25.0%
!!! TTTTGAAATGGATTTCTTCT+TGG - chr7_3:82938627-82938646 None:intergenic 25.0%
!!! ATCAGAATCTCTTTTTGAAA+TGG - chr7_3:82938639-82938658 None:intergenic 25.0%
! ATGATCATAAAAAACCAAAG+AGG - chr7_3:82938969-82938988 None:intergenic 25.0%
!!! TCTTTGGTTTTTTATGATCA+TGG + chr7_3:82938968-82938987 Msa1130730:intron 25.0%
!! ATCTATCTTTTGTGTATCAA+TGG - chr7_3:82939256-82939275 None:intergenic 25.0%
! TTTGTACTATGTTTGAAAAC+TGG - chr7_3:82939707-82939726 None:intergenic 25.0%
TAGTTGTTTGTTTGTAACGA+AGG + chr7_3:82935805-82935824 Msa1130730:five_prime_UTR 30.0%
!!! TGAAGGATTTTGATAATGGT+GGG - chr7_3:82935888-82935907 None:intergenic 30.0%
!!! ATGAAGGATTTTGATAATGG+TGG - chr7_3:82935889-82935908 None:intergenic 30.0%
! TAAAAGTACGAACCAATCAA+AGG - chr7_3:82936027-82936046 None:intergenic 30.0%
TAACAAATGCACATTTACTG+AGG + chr7_3:82936132-82936151 Msa1130730:CDS 30.0%
AACAAATGCACATTTACTGA+GGG + chr7_3:82936133-82936152 Msa1130730:CDS 30.0%
! ATGCTTTTACTACTACTACT+AGG + chr7_3:82936204-82936223 Msa1130730:CDS 30.0%
! TGATTGTTGTTGAATTTAGG+TGG - chr7_3:82936296-82936315 None:intergenic 30.0%
AAGTTAGTAAGTAAGTTACC+AGG - chr7_3:82936479-82936498 None:intergenic 30.0%
!! TAACAAAAATGGTGATGGAA+AGG - chr7_3:82937000-82937019 None:intergenic 30.0%
ATAAAGAAGGAGATTGTATG+GGG - chr7_3:82937061-82937080 None:intergenic 30.0%
CATAAAGAAGGAGATTGTAT+GGG - chr7_3:82937062-82937081 None:intergenic 30.0%
ACAAAAATGAAGATTAGTGC+TGG + chr7_3:82937099-82937118 Msa1130730:CDS 30.0%
!! ATTTAATTGCAGAAGCATCT+AGG + chr7_3:82937193-82937212 Msa1130730:CDS 30.0%
TGTTGAAGAAAGGAAACAAA+TGG + chr7_3:82937299-82937318 Msa1130730:CDS 30.0%
!! GTTTCTAGTTAATAATGGGA+GGG - chr7_3:82937567-82937586 None:intergenic 30.0%
!! TGTTTCTAGTTAATAATGGG+AGG - chr7_3:82937568-82937587 None:intergenic 30.0%
! CTTTTACAAAACTGGAAAAC+AGG - chr7_3:82937714-82937733 None:intergenic 30.0%
! TCACCATTCTTTTACAAAAC+TGG - chr7_3:82937722-82937741 None:intergenic 30.0%
GCAATTACAAGAATCTGTAT+AGG - chr7_3:82937780-82937799 None:intergenic 30.0%
CAGATTCTTGTAATTGCTAA+CGG + chr7_3:82937783-82937802 Msa1130730:intron 30.0%
TATACTAGGCATTTATTGGA+CGG - chr7_3:82938049-82938068 None:intergenic 30.0%
ATAGTTTATACAAAGGTTGC+AGG + chr7_3:82938140-82938159 Msa1130730:intron 30.0%
TAGTTTATACAAAGGTTGCA+GGG + chr7_3:82938141-82938160 Msa1130730:intron 30.0%
CAAAACTTATCTAGACCATT+TGG - chr7_3:82938354-82938373 None:intergenic 30.0%
!! AGAGAGAAAAGTACCAAAAA+GGG - chr7_3:82938479-82938498 None:intergenic 30.0%
!! AAGAGAGAAAAGTACCAAAA+AGG - chr7_3:82938480-82938499 None:intergenic 30.0%
TTCAGTAGAATGATGATACT+TGG - chr7_3:82938564-82938583 None:intergenic 30.0%
AGTATCATCATTCTACTGAA+AGG + chr7_3:82938564-82938583 Msa1130730:CDS 30.0%
! GAGGTTCTTATCATTTTCTT+AGG - chr7_3:82938950-82938969 None:intergenic 30.0%
GAAAATGATAAGAACCTCTT+TGG + chr7_3:82938952-82938971 Msa1130730:intron 30.0%
!!! TTGGTTTTTTATGATCATGG+TGG + chr7_3:82938971-82938990 Msa1130730:intron 30.0%
TACAGGATAATAGTTACAGT+TGG - chr7_3:82939073-82939092 None:intergenic 30.0%
!! TACAAGTTCTCTGAAGATTT+TGG + chr7_3:82939399-82939418 Msa1130730:CDS 30.0%
AGATTGTGTTTCATCTTCAA+GGG - chr7_3:82939598-82939617 None:intergenic 30.0%
TAGATTGTGTTTCATCTTCA+AGG - chr7_3:82939599-82939618 None:intergenic 30.0%
CACTCTTGAAGAAACATTTA+TGG - chr7_3:82939757-82939776 None:intergenic 30.0%
! CTCTTTAGCTAAAGCTATTT+TGG - chr7_3:82939849-82939868 None:intergenic 30.0%
GTGTCTTTCTCTTTATTATC+CGG - chr7_3:82939987-82940006 None:intergenic 30.0%
GATAATAAAGAGAAAGACAC+CGG + chr7_3:82939987-82940006 Msa1130730:three_prime_UTR 30.0%
ATAATAAAGAGAAAGACACC+GGG + chr7_3:82939988-82940007 Msa1130730:three_prime_UTR 30.0%
TGTTTGTTTGTAACGAAGGA+AGG + chr7_3:82935809-82935828 Msa1130730:five_prime_UTR 35.0%
TGACGCAGATAAATGAATGA+AGG - chr7_3:82935905-82935924 None:intergenic 35.0%
CTTGTAATTGAGTGTGGATA+TGG - chr7_3:82936170-82936189 None:intergenic 35.0%
CTTCTTCTTGTAATTGAGTG+TGG - chr7_3:82936176-82936195 None:intergenic 35.0%
! CTTTTACTACTACTACTAGG+AGG + chr7_3:82936207-82936226 Msa1130730:CDS 35.0%
ATTCAACAACAATCACTTGG+AGG + chr7_3:82936301-82936320 Msa1130730:CDS 35.0%
CTAATAAAGGAAACACTCCA+TGG + chr7_3:82936432-82936451 Msa1130730:CDS 35.0%
!! TGCAAAGTTTCTGGTGAAAT+AGG - chr7_3:82936588-82936607 None:intergenic 35.0%
AGAAACTTTGCAGAAGATCA+GGG + chr7_3:82936596-82936615 Msa1130730:intron 35.0%
! TACCAAGTAGTTTGAGTTTG+AGG + chr7_3:82936819-82936838 Msa1130730:intron 35.0%
! ACCAAGTAGTTTGAGTTTGA+GGG + chr7_3:82936820-82936839 Msa1130730:intron 35.0%
CCATAAAGAAGGAGATTGTA+TGG - chr7_3:82937063-82937082 None:intergenic 35.0%
CCATACAATCTCCTTCTTTA+TGG + chr7_3:82937060-82937079 Msa1130730:intron 35.0%
TACTGTGCAATCCATAAAGA+AGG - chr7_3:82937074-82937093 None:intergenic 35.0%
ATGGAATTCCTATGAAACCT+TGG + chr7_3:82937245-82937264 Msa1130730:CDS 35.0%
! AATTTTCCTTCTCTGTTCAG+GGG - chr7_3:82937358-82937377 None:intergenic 35.0%
! CAATTTTCCTTCTCTGTTCA+GGG - chr7_3:82937359-82937378 None:intergenic 35.0%
AGAAGCTATTGCTGCAAAAT+GGG + chr7_3:82937380-82937399 Msa1130730:CDS 35.0%
TTGTAATTGCTAACGGAAAC+AGG + chr7_3:82937790-82937809 Msa1130730:intron 35.0%
TTTGGCACAACAAAACATCA+GGG - chr7_3:82937855-82937874 None:intergenic 35.0%
ATTTGGCACAACAAAACATC+AGG - chr7_3:82937856-82937875 None:intergenic 35.0%
AAAATCTGTTGCGTGAGATT+TGG - chr7_3:82937873-82937892 None:intergenic 35.0%
AGTTTATACAAAGGTTGCAG+GGG + chr7_3:82938142-82938161 Msa1130730:intron 35.0%
! CCATTTTCTATATAGGGCAA+CGG - chr7_3:82938260-82938279 None:intergenic 35.0%
AAAATCAAAGTCCACAGACA+AGG - chr7_3:82938307-82938326 None:intergenic 35.0%
AAGTTACACGTTACACCAAA+TGG + chr7_3:82938336-82938355 Msa1130730:intron 35.0%
! TTTTTCCAGGTACAACACTT+TGG - chr7_3:82938377-82938396 None:intergenic 35.0%
!! GTACTTTGACAACTTTTTCC+AGG - chr7_3:82938390-82938409 None:intergenic 35.0%
! CTTGCAAGTTTCTTTTCTGT+AGG + chr7_3:82938432-82938451 Msa1130730:intron 35.0%
! TTTGGTACTTTTCTCTCTTC+AGG + chr7_3:82938481-82938500 Msa1130730:intron 35.0%
! TTTCTTTTTCTCAGCTGGAT+CGG - chr7_3:82938701-82938720 None:intergenic 35.0%
ATTCACCAAAGGATCCTTAT+AGG - chr7_3:82938732-82938751 None:intergenic 35.0%
GTTCTTTATCATCTCTAGCT+TGG - chr7_3:82938756-82938775 None:intergenic 35.0%
ATTAGAGAAGACTGAGCAAT+GGG - chr7_3:82939189-82939208 None:intergenic 35.0%
TATTAGAGAAGACTGAGCAA+TGG - chr7_3:82939190-82939209 None:intergenic 35.0%
AGTTCGAAACCATTCAGAAA+TGG + chr7_3:82939338-82939357 Msa1130730:CDS 35.0%
ATCTGGCTATTCAAACTGAA+AGG - chr7_3:82939495-82939514 None:intergenic 35.0%
!! TTTCCCTTTGCTGATTTGAT+GGG - chr7_3:82939530-82939549 None:intergenic 35.0%
!!! CCACTTTTTAGTTGCAATAG+GGG - chr7_3:82939625-82939644 None:intergenic 35.0%
!!! CCCACTTTTTAGTTGCAATA+GGG - chr7_3:82939626-82939645 None:intergenic 35.0%
CCCTATTGCAACTAAAAAGT+GGG + chr7_3:82939623-82939642 Msa1130730:CDS 35.0%
!!! ACCCACTTTTTAGTTGCAAT+AGG - chr7_3:82939627-82939646 None:intergenic 35.0%
TGTTTGTAACGAAGGAAGGA+AGG + chr7_3:82935813-82935832 Msa1130730:five_prime_UTR 40.0%
!!! GGATTTTGATAATGGTGGGT+GGG - chr7_3:82935884-82935903 None:intergenic 40.0%
!!! AGGATTTTGATAATGGTGGG+TGG - chr7_3:82935885-82935904 None:intergenic 40.0%
! TACGAACCAATCAAAGGCAT+GGG - chr7_3:82936021-82936040 None:intergenic 40.0%
GTAATTGAGTGTGGATATGG+TGG - chr7_3:82936167-82936186 None:intergenic 40.0%
TTACTACTACTACTAGGAGG+TGG + chr7_3:82936210-82936229 Msa1130730:CDS 40.0%
TGATGAAGCATAATCGGATG+AGG - chr7_3:82936338-82936357 None:intergenic 40.0%
TGCTTTCTTCCTTTGTTCCA+TGG - chr7_3:82936452-82936471 None:intergenic 40.0%
CTGATCTTCTGCAAAGTTTC+TGG - chr7_3:82936597-82936616 None:intergenic 40.0%
CAGAAACTTTGCAGAAGATC+AGG + chr7_3:82936595-82936614 Msa1130730:intron 40.0%
TGCTTACATGACATCACCTT+AGG - chr7_3:82936648-82936667 None:intergenic 40.0%
ACAATGAGGACATGCAACAA+TGG + chr7_3:82936712-82936731 Msa1130730:intron 40.0%
! CCAAGTAGTTTGAGTTTGAG+GGG + chr7_3:82936821-82936840 Msa1130730:intron 40.0%
! CAAGTAGTTTGAGTTTGAGG+GGG + chr7_3:82936822-82936841 Msa1130730:intron 40.0%
! GCATTGCGAAAGGATTTGTT+AGG - chr7_3:82936926-82936945 None:intergenic 40.0%
AACAAATCCTTTCGCAATGC+AGG + chr7_3:82936926-82936945 Msa1130730:intron 40.0%
!! ATTTTGACCTGCATTGCGAA+AGG - chr7_3:82936936-82936955 None:intergenic 40.0%
GGAGATTGTATGGGGTAAAA+GGG - chr7_3:82937053-82937072 None:intergenic 40.0%
AGGAGATTGTATGGGGTAAA+AGG - chr7_3:82937054-82937073 None:intergenic 40.0%
TGAGAAAGCTATGGGAAATG+AGG + chr7_3:82937124-82937143 Msa1130730:CDS 40.0%
CTGTTCATCCAAGGTTTCAT+AGG - chr7_3:82937256-82937275 None:intergenic 40.0%
AAGAAAGGAAACAAATGGCG+AGG + chr7_3:82937304-82937323 Msa1130730:CDS 40.0%
AGAAAGGAAACAAATGGCGA+GGG + chr7_3:82937305-82937324 Msa1130730:CDS 40.0%
! GCAATTTTCCTTCTCTGTTC+AGG - chr7_3:82937360-82937379 None:intergenic 40.0%
CAGAAGCTATTGCTGCAAAA+TGG + chr7_3:82937379-82937398 Msa1130730:CDS 40.0%
CTAGAAACACATGCAGTTTC+AGG + chr7_3:82937579-82937598 Msa1130730:intron 40.0%
CTGGATTCTCTTGCTTCTAA+AGG + chr7_3:82937605-82937624 Msa1130730:intron 40.0%
!! CTATAAAAGAGAGGAGTGCT+AGG - chr7_3:82938124-82938143 None:intergenic 40.0%
GTTTATACAAAGGTTGCAGG+GGG + chr7_3:82938143-82938162 Msa1130730:intron 40.0%
CCGTTGCCCTATATAGAAAA+TGG + chr7_3:82938257-82938276 Msa1130730:intron 40.0%
!!! TTTTGCCAAAGTGTTGTACC+TGG + chr7_3:82938369-82938388 Msa1130730:intron 40.0%
!!! TAGGGTTGTTTCTCCCTTTT+TGG + chr7_3:82938463-82938482 Msa1130730:intron 40.0%
CTGAAAGGAAACCTAGAACA+AGG + chr7_3:82938579-82938598 Msa1130730:CDS 40.0%
GAGAGTTGTGCACTATAACT+GGG - chr7_3:82938605-82938624 None:intergenic 40.0%
!! GATCGGCTTAACAATTTTGG+AGG - chr7_3:82938684-82938703 None:intergenic 40.0%
!! CTGGATCGGCTTAACAATTT+TGG - chr7_3:82938687-82938706 None:intergenic 40.0%
! GGGATTTTCTTTTTCTCAGC+TGG - chr7_3:82938706-82938725 None:intergenic 40.0%
AAGAAAATCCCCTGCCTATA+AGG + chr7_3:82938715-82938734 Msa1130730:CDS 40.0%
! TCTAGCTTGGAATTCACCAA+AGG - chr7_3:82938743-82938762 None:intergenic 40.0%
TTGTATGGCTTGAGTTTGTC+TGG - chr7_3:82938807-82938826 None:intergenic 40.0%
AGCTTCAGCTATAAGCTTTC+TGG - chr7_3:82939217-82939236 None:intergenic 40.0%
TTACTTGGGCCATTTCTGAA+TGG - chr7_3:82939350-82939369 None:intergenic 40.0%
TCAGAAATGGCCCAAGTAAA+TGG + chr7_3:82939351-82939370 Msa1130730:CDS 40.0%
TGTTGTGCGTCCATTTACTT+GGG - chr7_3:82939364-82939383 None:intergenic 40.0%
ATGTTGTGCGTCCATTTACT+TGG - chr7_3:82939365-82939384 None:intergenic 40.0%
TCAGAGAACTTGTAGAAGCT+TGG - chr7_3:82939393-82939412 None:intergenic 40.0%
!! AGATTTTGGTGAACTTTCCC+TGG + chr7_3:82939413-82939432 Msa1130730:CDS 40.0%
! AAGAAGCACATCCATTGGTT+AGG - chr7_3:82939470-82939489 None:intergenic 40.0%
! AGGTAAAGAAGCACATCCAT+TGG - chr7_3:82939475-82939494 None:intergenic 40.0%
!! GTTTCCCTTTGCTGATTTGA+TGG - chr7_3:82939531-82939550 None:intergenic 40.0%
CCCCTATTGCAACTAAAAAG+TGG + chr7_3:82939622-82939641 Msa1130730:CDS 40.0%
ATGTCTACCTAGACAATTGG+TGG - chr7_3:82939821-82939840 None:intergenic 40.0%
ACCAATTGTCTAGGTAGACA+TGG + chr7_3:82939820-82939839 Msa1130730:three_prime_UTR 40.0%
TCCATGTCTACCTAGACAAT+TGG - chr7_3:82939824-82939843 None:intergenic 40.0%
!!! GGTAGTTTTGTAGCATGTAG+TGG + chr7_3:82939961-82939980 Msa1130730:three_prime_UTR 40.0%
TGTAACGAAGGAAGGAAGGA+AGG + chr7_3:82935817-82935836 Msa1130730:five_prime_UTR 45.0%
AGCAACGTTATCCTCTTCTC+TGG + chr7_3:82935841-82935860 Msa1130730:five_prime_UTR 45.0%
CGTTATCCTCTTCTCTGGTT+TGG + chr7_3:82935846-82935865 Msa1130730:five_prime_UTR 45.0%
TGGAAACCAAACCAGAGAAG+AGG - chr7_3:82935855-82935874 None:intergenic 45.0%
! ACGAACCAATCAAAGGCATG+GGG - chr7_3:82936020-82936039 None:intergenic 45.0%
GTACGAACCAATCAAAGGCA+TGG - chr7_3:82936022-82936041 None:intergenic 45.0%
GAGTGTGGATATGGTGGTAA+TGG - chr7_3:82936161-82936180 None:intergenic 45.0%
! GCAACGGCTTTAATGAGGAA+TGG - chr7_3:82936245-82936264 None:intergenic 45.0%
AACTTCTCGCTCTCATCAAG+TGG - chr7_3:82936389-82936408 None:intergenic 45.0%
GGAAACACTCCATGGAACAA+AGG + chr7_3:82936440-82936459 Msa1130730:CDS 45.0%
! AAAGGAAGAAAGCACAGTCC+TGG + chr7_3:82936458-82936477 Msa1130730:CDS 45.0%
CCCCTCAAACTCAAACTACT+TGG - chr7_3:82936824-82936843 None:intergenic 45.0%
TGCTGGAGTGAGAAAGCTAT+GGG + chr7_3:82937116-82937135 Msa1130730:CDS 45.0%
!! ATTGCAGAAGCATCTAGGCA+AGG + chr7_3:82937198-82937217 Msa1130730:CDS 45.0%
CTGCTTAAGCTGTTCATCCA+AGG - chr7_3:82937265-82937284 None:intergenic 45.0%
CTTGGATGAACAGCTTAAGC+AGG + chr7_3:82937263-82937282 Msa1130730:CDS 45.0%
ATGAACAGCTTAAGCAGGAG+TGG + chr7_3:82937268-82937287 Msa1130730:CDS 45.0%
! GGTTGCTCAGTGTTGAAGAA+AGG + chr7_3:82937289-82937308 Msa1130730:CDS 45.0%
! CACATGCAGTTTCAGGTAAC+TGG + chr7_3:82937586-82937605 Msa1130730:intron 45.0%
AGTGCGGTCAGAATAGTCAA+AGG + chr7_3:82938173-82938192 Msa1130730:intron 45.0%
TGTGTTTCCATCCTTGTCTG+TGG + chr7_3:82938293-82938312 Msa1130730:intron 45.0%
TCAAAGTCCACAGACAAGGA+TGG - chr7_3:82938303-82938322 None:intergenic 45.0%
TTGCAGAGCAGACTCTTTCA+CGG - chr7_3:82938538-82938557 None:intergenic 45.0%
!! CTATAACTGGGCCTTGTTCT+AGG - chr7_3:82938593-82938612 None:intergenic 45.0%
GGAGAGTTGTGCACTATAAC+TGG - chr7_3:82938606-82938625 None:intergenic 45.0%
CAAAGGATCCTTATAGGCAG+GGG - chr7_3:82938726-82938745 None:intergenic 45.0%
CCAAAGGATCCTTATAGGCA+GGG - chr7_3:82938727-82938746 None:intergenic 45.0%
ACCAAAGGATCCTTATAGGC+AGG - chr7_3:82938728-82938747 None:intergenic 45.0%
TTGAGTTTGTCTGGTATCCG+CGG - chr7_3:82938798-82938817 None:intergenic 45.0%
CTCAAGCCATACAACAAGCA+AGG + chr7_3:82938813-82938832 Msa1130730:CDS 45.0%
!! GGTCTACCTTGCTTGTTGTA+TGG - chr7_3:82938822-82938841 None:intergenic 45.0%
!! ATGGTGGATGCGATGAACAT+TGG + chr7_3:82938987-82939006 Msa1130730:intron 45.0%
GATTGCTGAAGCTGAGAAAG+CGG + chr7_3:82939131-82939150 Msa1130730:CDS 45.0%
AGATGACTGTAGTGTCCCTT+CGG + chr7_3:82939272-82939291 Msa1130730:CDS 45.0%
TAGTTTGAGCGAGGTCAATC+AGG + chr7_3:82939296-82939315 Msa1130730:CDS 45.0%
!! AGTTCTGGAACGCCATTAAC+TGG - chr7_3:82939444-82939463 None:intergenic 45.0%
! CCATTGGTTAGGTGAAGTTC+TGG - chr7_3:82939459-82939478 None:intergenic 45.0%
CCAGAACTTCACCTAACCAA+TGG + chr7_3:82939456-82939475 Msa1130730:CDS 45.0%
ATGGGCAGTCTTGGTTTATC+TGG - chr7_3:82939512-82939531 None:intergenic 45.0%
ACTGCCCATCAAATCAGCAA+AGG + chr7_3:82939523-82939542 Msa1130730:CDS 45.0%
CTGCCCATCAAATCAGCAAA+GGG + chr7_3:82939524-82939543 Msa1130730:CDS 45.0%
TCAGCAAAGGGAAACAGAAC+AGG + chr7_3:82939536-82939555 Msa1130730:CDS 45.0%
! GCAACTAAAAAGTGGGTTCG+CGG + chr7_3:82939630-82939649 Msa1130730:CDS 45.0%
! TGGCTGGTCAGCTAATGATT+TGG - chr7_3:82939801-82939820 None:intergenic 45.0%
! GTTTTGTAGCATGTAGTGGC+CGG + chr7_3:82939965-82939984 Msa1130730:three_prime_UTR 45.0%
ATAAAGAGAAAGACACCGGG+TGG + chr7_3:82939991-82940010 Msa1130730:three_prime_UTR 45.0%
TAAAGAGAAAGACACCGGGT+GGG + chr7_3:82939992-82940011 Msa1130730:three_prime_UTR 45.0%
!! ATTAAAATAAGTATTAAAAT+GGG - chr7_3:82938843-82938862 None:intergenic 5.0%
!! AATTAAAATAAGTATTAAAA+TGG - chr7_3:82938844-82938863 None:intergenic 5.0%
!! TAATGGTGGGTGGGATTCGA+TGG - chr7_3:82935875-82935894 None:intergenic 50.0%
! CGAACCAATCAAAGGCATGG+GGG - chr7_3:82936019-82936038 None:intergenic 50.0%
CTACTACTACTAGGAGGTGG+AGG + chr7_3:82936213-82936232 Msa1130730:CDS 50.0%
! TAGCGGCAACGGCTTTAATG+AGG - chr7_3:82936250-82936269 None:intergenic 50.0%
AACCATCGTAGCAGCAGTAG+CGG - chr7_3:82936267-82936286 None:intergenic 50.0%
CCTTAGGATTCTGCATAGCG+AGG - chr7_3:82936632-82936651 None:intergenic 50.0%
CCTCGCTATGCAGAATCCTA+AGG + chr7_3:82936629-82936648 Msa1130730:CDS 50.0%
GTGCTGGAGTGAGAAAGCTA+TGG + chr7_3:82937115-82937134 Msa1130730:CDS 50.0%
AAGCTATGGGAAATGAGGCG+TGG + chr7_3:82937129-82937148 Msa1130730:CDS 50.0%
TATGGGAAATGAGGCGTGGA+AGG + chr7_3:82937133-82937152 Msa1130730:CDS 50.0%
AATGAGGCGTGGAAGGAAGA+TGG + chr7_3:82937140-82937159 Msa1130730:CDS 50.0%
!! AGGAGAGTTGCTGCTTTGAG+TGG + chr7_3:82937166-82937185 Msa1130730:CDS 50.0%
! GCATCTAGGCAAGGCTTTGT+TGG + chr7_3:82937207-82937226 Msa1130730:CDS 50.0%
!! TAGGCAAGGCTTTGTTGGTC+AGG + chr7_3:82937212-82937231 Msa1130730:CDS 50.0%
TTGGTCAGGAAGAGCTGCAA+TGG + chr7_3:82937226-82937245 Msa1130730:CDS 50.0%
TTGGGTGCTCTGTTGCTAAC+TGG - chr7_3:82937333-82937352 None:intergenic 50.0%
CTTCTCTGTTCAGGGGACTT+GGG - chr7_3:82937351-82937370 None:intergenic 50.0%
CTAGGCATTTATTGGACGGC+AGG - chr7_3:82938045-82938064 None:intergenic 50.0%
TATACAAAGGTTGCAGGGGG+AGG + chr7_3:82938146-82938165 Msa1130730:intron 50.0%
CCCTGCCTATAAGGATCCTT+TGG + chr7_3:82938724-82938743 Msa1130730:CDS 50.0%
CCTCGCTCAAACTAACCGAA+GGG - chr7_3:82939290-82939309 None:intergenic 50.0%
ACCTCGCTCAAACTAACCGA+AGG - chr7_3:82939291-82939310 None:intergenic 50.0%
TCCCTGGAGAGACCAGTTAA+TGG + chr7_3:82939429-82939448 Msa1130730:CDS 50.0%
! GCCATTAACTGGTCTCTCCA+GGG - chr7_3:82939433-82939452 None:intergenic 50.0%
!! GCTGATTTGATGGGCAGTCT+TGG - chr7_3:82939521-82939540 None:intergenic 50.0%
! CTAAAAAGTGGGTTCGCGGA+AGG + chr7_3:82939634-82939653 Msa1130730:CDS 50.0%
TGACCAGCCACCAATTGTCT+AGG + chr7_3:82939811-82939830 Msa1130730:three_prime_UTR 50.0%
! CTACCTAGACAATTGGTGGC+TGG - chr7_3:82939817-82939836 None:intergenic 50.0%
AGCGAACGAGCGAGAGTAAG+AGG - chr7_3:82935977-82935996 None:intergenic 55.0%
TGAGCCCCCATGCCTTTGAT+TGG + chr7_3:82936012-82936031 Msa1130730:exon 55.0%
CTACTACTAGGAGGTGGAGG+AGG + chr7_3:82936216-82936235 Msa1130730:CDS 55.0%
CCTTCTCTGTTCAGGGGACT+TGG - chr7_3:82937352-82937371 None:intergenic 55.0%
CCAAGTCCCCTGAACAGAGA+AGG + chr7_3:82937349-82937368 Msa1130730:CDS 55.0%
AAAGTTGGGTCAAAGGCCCG+AGG + chr7_3:82938074-82938093 Msa1130730:intron 55.0%
CAGAGCACAAAGAGCTTCCG+CGG + chr7_3:82938778-82938797 Msa1130730:CDS 55.0%
TGAAGCTGAGAAAGCGGCCA+AGG + chr7_3:82939137-82939156 Msa1130730:CDS 55.0%
!! CCCTTCGGTTAGTTTGAGCG+AGG + chr7_3:82939287-82939306 Msa1130730:CDS 55.0%
! CGCCATTAACTGGTCTCTCC+AGG - chr7_3:82939434-82939453 None:intergenic 55.0%
CGTAGCAGCAGTAGCGGCAA+CGG - chr7_3:82936261-82936280 None:intergenic 60.0%
TGCCGCTACTGCTGCTACGA+TGG + chr7_3:82936262-82936281 Msa1130730:CDS 60.0%
GCGTGGAAGGAAGATGGTGC+AGG + chr7_3:82937146-82937165 Msa1130730:CDS 60.0%
TGCAGGGGGAGGATGAAGTG+CGG + chr7_3:82938157-82938176 Msa1130730:intron 60.0%
TGAGAAAGCGGCCAAGGCAC+TGG + chr7_3:82939143-82939162 Msa1130730:CDS 60.0%
!! CAAGGCACTGGAGGTTGCTG+CGG + chr7_3:82939155-82939174 Msa1130730:CDS 60.0%
!! GAAAGCGGCCAAGGCACTGG+AGG + chr7_3:82939146-82939165 Msa1130730:CDS 65.0%
CGCAGCAACCTCCAGTGCCT+TGG - chr7_3:82939157-82939176 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 82935767 82940016 82935767 ID=Msa1130730;Name=Msa1130730
chr7_3 mRNA 82935767 82940016 82935767 ID=Msa1130730-mRNA-1;Parent=Msa1130730;Name=Msa1130730-mRNA-1;_AED=0.18;_eAED=0.18;_QI=254|0.83|0.85|1|1|1|7|330|555
chr7_3 exon 82935767 82936033 82935767 ID=Msa1130730-mRNA-1:exon:24558;Parent=Msa1130730-mRNA-1
chr7_3 exon 82936129 82936479 82936129 ID=Msa1130730-mRNA-1:exon:24559;Parent=Msa1130730-mRNA-1
chr7_3 exon 82936598 82936650 82936598 ID=Msa1130730-mRNA-1:exon:24560;Parent=Msa1130730-mRNA-1
chr7_3 exon 82936948 82936985 82936948 ID=Msa1130730-mRNA-1:exon:24561;Parent=Msa1130730-mRNA-1
chr7_3 exon 82937092 82937410 82937092 ID=Msa1130730-mRNA-1:exon:24562;Parent=Msa1130730-mRNA-1
chr7_3 exon 82938503 82938834 82938503 ID=Msa1130730-mRNA-1:exon:24563;Parent=Msa1130730-mRNA-1
chr7_3 exon 82939125 82940016 82939125 ID=Msa1130730-mRNA-1:exon:24564;Parent=Msa1130730-mRNA-1
chr7_3 five_prime_UTR 82935767 82936020 82935767 ID=Msa1130730-mRNA-1:five_prime_utr;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82936021 82936033 82936021 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82936129 82936479 82936129 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82936598 82936650 82936598 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82936948 82936985 82936948 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82937092 82937410 82937092 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82938503 82938834 82938503 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 CDS 82939125 82939686 82939125 ID=Msa1130730-mRNA-1:cds;Parent=Msa1130730-mRNA-1
chr7_3 three_prime_UTR 82939687 82940016 82939687 ID=Msa1130730-mRNA-1:three_prime_utr;Parent=Msa1130730-mRNA-1
Gene Sequence

>Msa1130730

ATGCCTTTGATTGAGATAACAAATGCACATTTACTGAGGGTTCCATTACCACCATATCCACACTCAATTACAAGAAGAAGAATTGACGATGCTTTTACTACTACTACTAGGAGGTGGAGGAGGTTTCCATTCCTCATTAAAGCCGTTGCCGCTACTGCTGCTACGATGGTTCAACAACCACCTAAATTCAACAACAATCACTTGGAGGAGCATCTAAATCCTCATCCGATTATGCTTCATCATAATTATGATGATGATGATGATGAACGACCACTTGATGAGAGCGAGAAGTTGAGAAGATTGAGAATTTCTAAAGCTAATAAAGGAAACACTCCATGGAACAAAGGAAGAAAGCACAGTCCTGAAACTTTGCAGAAGATCAGGGAAAGAACACGCCTCGCTATGCAGAATCCTAAGGTCAAAATGAAGTTGACTAATCTTGGACATGCTCAAACTACAGAAACAAAAATGAAGATTAGTGCTGGAGTGAGAAAGCTATGGGAAATGAGGCGTGGAAGGAAGATGGTGCAGGAGAGTTGCTGCTTTGAGTGGCAGAATTTAATTGCAGAAGCATCTAGGCAAGGCTTTGTTGGTCAGGAAGAGCTGCAATGGAATTCCTATGAAACCTTGGATGAACAGCTTAAGCAGGAGTGGTTGCTCAGTGTTGAAGAAAGGAAACAAATGGCGAGGGCACCAGTTAGCAACAGAGCACCCAAGTCCCCTGAACAGAGAAGGAAAATTGCAGAAGCTATTGCTGCAAAATGGGCTGATCCCGACCAACATATTTTTCTGTTAAATCAGGATTACCGTGAAAGAGTCTGCTCTGCAATTGCCAAGTATCATCATTCTACTGAAAGGAAACCTAGAACAAGGCCCAGTTATAGTGCACAACTCTCCAAGAAGAAATCCATTTCAAAAAGAGATTCTGATACTAGCATTGTTATTAAGAGTGCCTCCAAAATTGTTAAGCCGATCCAGCTGAGAAAAAGAAAATCCCCTGCCTATAAGGATCCTTTGGTGAATTCCAAGCTAGAGATGATAAAGAACATCAGAGCACAAAGAGCTTCCGCGGATACCAGACAAACTCAAGCCATACAACAAGCAAGACTATTGATTGCTGAAGCTGAGAAAGCGGCCAAGGCACTGGAGGTTGCTGCGGCAAAGAGTCCCATTGCTCAGTCTTCTCTAATAGAAACCAGAAAGCTTATAGCTGAAGCTATTCAATCACTTGAATCCATTGATACACAAAAGATAGATGACTGTAGTGTCCCTTCGGTTAGTTTGAGCGAGGTCAATCAGGAAAACGAATCAGCATTTGAAGTTCGAAACCATTCAGAAATGGCCCAAGTAAATGGACGCACAACATTGTCACCAAGCTTCTACAAGTTCTCTGAAGATTTTGGTGAACTTTCCCTGGAGAGACCAGTTAATGGCGTTCCAGAACTTCACCTAACCAATGGATGTGCTTCTTTACCTTTCAGTTTGAATAGCCAGATAAACCAAGACTGCCCATCAAATCAGCAAAGGGAAACAGAACAGGATGAGAGCAGCGAAGACGAAACAGATCATTCACAGTCCCTTGAAGATGAAACACAATCTAGTTCCCCTATTGCAACTAAAAAGTGGGTTCGCGGAAGGCTTGTTGAAGTGAGTGAAGAGAATCAGTAA

Protein sequence

>Msa1130730

MPLIEITNAHLLRVPLPPYPHSITRRRIDDAFTTTTRRWRRFPFLIKAVAATAATMVQQPPKFNNNHLEEHLNPHPIMLHHNYDDDDDERPLDESEKLRRLRISKANKGNTPWNKGRKHSPETLQKIRERTRLAMQNPKVKMKLTNLGHAQTTETKMKISAGVRKLWEMRRGRKMVQESCCFEWQNLIAEASRQGFVGQEELQWNSYETLDEQLKQEWLLSVEERKQMARAPVSNRAPKSPEQRRKIAEAIAAKWADPDQHIFLLNQDYRERVCSAIAKYHHSTERKPRTRPSYSAQLSKKKSISKRDSDTSIVIKSASKIVKPIQLRKRKSPAYKDPLVNSKLEMIKNIRAQRASADTRQTQAIQQARLLIAEAEKAAKALEVAAAKSPIAQSSLIETRKLIAEAIQSLESIDTQKIDDCSVPSVSLSEVNQENESAFEVRNHSEMAQVNGRTTLSPSFYKFSEDFGELSLERPVNGVPELHLTNGCASLPFSLNSQINQDCPSNQQRETEQDESSEDETDHSQSLEDETQSSSPIATKKWVRGRLVEVSEENQ*