Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276610 | XP_003594150.3 | 83.954 | 349 | 51 | 5 | 1 | 346 | 68 | 414 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276610 | A0A396J8B3 | 83.954 | 349 | 51 | 5 | 1 | 346 | 80 | 426 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008250 | Msa0276610 | 0.813019 | 3.164170e-51 | -8.615850e-47 |
| Msa0039590 | Msa0276610 | 0.800843 | 1.191346e-48 | -8.615850e-47 |
| Msa0044320 | Msa0276610 | 0.833238 | 5.982255e-56 | -8.615850e-47 |
| Msa0050320 | Msa0276610 | 0.806024 | 1.005426e-49 | -8.615850e-47 |
| Msa0059880 | Msa0276610 | -0.800651 | 1.304127e-48 | -8.615850e-47 |
| Msa0067750 | Msa0276610 | 0.835469 | 1.647927e-56 | -8.615850e-47 |
| Msa0083550 | Msa0276610 | 0.814560 | 1.447709e-51 | -8.615850e-47 |
| Msa0099090 | Msa0276610 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0127210 | Msa0276610 | 0.810583 | 1.072609e-50 | -8.615850e-47 |
| Msa0136580 | Msa0276610 | 0.800430 | 1.446468e-48 | -8.615850e-47 |
| Msa0138340 | Msa0276610 | 0.808166 | 3.539798e-50 | -8.615850e-47 |
| Msa0146210 | Msa0276610 | -0.807857 | 4.117714e-50 | -8.615850e-47 |
| Msa0147960 | Msa0276610 | 0.804671 | 1.931632e-49 | -8.615850e-47 |
| Msa0154720 | Msa0276610 | 0.806302 | 8.786828e-50 | -8.615850e-47 |
| Msa0163960 | Msa0276610 | 0.823769 | 1.158669e-53 | -8.615850e-47 |
| Msa0169050 | Msa0276610 | -0.830187 | 3.382238e-55 | -8.615850e-47 |
| Msa0194750 | Msa0276610 | 0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0225070 | Msa0276610 | 0.808579 | 2.889830e-50 | -8.615850e-47 |
| Msa0236690 | Msa0276610 | 0.810928 | 9.032240e-51 | -8.615850e-47 |
| Msa0237440 | Msa0276610 | 0.806439 | 8.222373e-50 | -8.615850e-47 |
| Msa0269660 | Msa0276610 | 0.808415 | 3.131973e-50 | -8.615850e-47 |
| Msa0272420 | Msa0276610 | 0.800442 | 1.438592e-48 | -8.615850e-47 |
| Msa0275570 | Msa0276610 | -0.804422 | 2.176725e-49 | -8.615850e-47 |
| Msa0276610 | Msa0304020 | 0.807412 | 5.118142e-50 | -8.615850e-47 |
| Msa0276610 | Msa0304350 | 0.803628 | 3.183289e-49 | -8.615850e-47 |
| Msa0276610 | Msa0305910 | 0.807700 | 4.447999e-50 | -8.615850e-47 |
| Msa0276610 | Msa0310260 | 0.818170 | 2.254440e-52 | -8.615850e-47 |
| Msa0276610 | Msa0312570 | 0.802991 | 4.312782e-49 | -8.615850e-47 |
| Msa0276610 | Msa0315010 | 0.820660 | 6.099923e-53 | -8.615850e-47 |
| Msa0276610 | Msa0327900 | 0.802046 | 6.754237e-49 | -8.615850e-47 |
| Msa0276610 | Msa0330770 | 0.813915 | 2.009515e-51 | -8.615850e-47 |
| Msa0276610 | Msa0340830 | 0.800307 | 1.532839e-48 | -8.615850e-47 |
| Msa0276610 | Msa0340870 | 0.808231 | 3.428098e-50 | -8.615850e-47 |
| Msa0276610 | Msa0343230 | 0.808775 | 2.623572e-50 | -8.615850e-47 |
| Msa0276610 | Msa0349220 | 0.807685 | 4.479881e-50 | -8.615850e-47 |
| Msa0276610 | Msa0351930 | 0.813902 | 2.023221e-51 | -8.615850e-47 |
| Msa0276610 | Msa0361500 | 0.802435 | 5.617359e-49 | -8.615850e-47 |
| Msa0276610 | Msa0367590 | 0.822082 | 2.864672e-53 | -8.615850e-47 |
| Msa0276610 | Msa0376480 | 0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa0276610 | Msa0409000 | 0.810982 | 8.790751e-51 | -8.615850e-47 |
| Msa0276610 | Msa0416040 | -0.827866 | 1.234573e-54 | -8.615850e-47 |
| Msa0276610 | Msa0422230 | 0.807855 | 4.122736e-50 | -8.615850e-47 |
| Msa0276610 | Msa0460220 | 0.809895 | 1.508925e-50 | -8.615850e-47 |
| Msa0276610 | Msa0476820 | 0.808316 | 3.288803e-50 | -8.615850e-47 |
| Msa0276610 | Msa0516330 | 0.821197 | 4.587941e-53 | -8.615850e-47 |
| Msa0276610 | Msa0525940 | 0.809337 | 1.988869e-50 | -8.615850e-47 |
| Msa0276610 | Msa0533140 | 0.816432 | 5.545726e-52 | -8.615850e-47 |
| Msa0276610 | Msa0535020 | 0.806435 | 8.238040e-50 | -8.615850e-47 |
| Msa0276610 | Msa0535050 | 0.802109 | 6.557781e-49 | -8.615850e-47 |
| Msa0276610 | Msa0540160 | 0.815011 | 1.150194e-51 | -8.615850e-47 |
| Msa0276610 | Msa0561420 | 0.841222 | 5.417724e-58 | -8.615850e-47 |
| Msa0276610 | Msa0565150 | 0.820035 | 8.484400e-53 | -8.615850e-47 |
| Msa0276610 | Msa0565530 | 0.825521 | 4.479529e-54 | -8.615850e-47 |
| Msa0276610 | Msa0568120 | 0.805020 | 1.632798e-49 | -8.615850e-47 |
| Msa0276610 | Msa0581370 | -0.802241 | 6.159632e-49 | -8.615850e-47 |
| Msa0276610 | Msa0587070 | 0.800700 | 1.274487e-48 | -8.615850e-47 |
| Msa0276610 | Msa0588600 | 0.803770 | 2.974343e-49 | -8.615850e-47 |
| Msa0276610 | Msa0615430 | 0.843941 | 1.028073e-58 | -8.615850e-47 |
| Msa0276610 | Msa0625440 | 0.825133 | 5.533911e-54 | -8.615850e-47 |
| Msa0276610 | Msa0632040 | 0.802877 | 4.553293e-49 | -8.615850e-47 |
| Msa0276610 | Msa0642150 | 0.804582 | 2.016162e-49 | -8.615850e-47 |
| Msa0276610 | Msa0654880 | 0.839327 | 1.692948e-57 | -8.615850e-47 |
| Msa0276610 | Msa0660070 | 0.823032 | 1.722548e-53 | -8.615850e-47 |
| Msa0276610 | Msa0661040 | 0.829898 | 3.977558e-55 | -8.615850e-47 |
| Msa0276610 | Msa0695800 | 0.806340 | 8.628264e-50 | -8.615850e-47 |
| Msa0276610 | Msa0698480 | 0.837467 | 5.109429e-57 | -8.615850e-47 |
| Msa0276610 | Msa0698650 | 0.838147 | 3.417322e-57 | -8.615850e-47 |
| Msa0276610 | Msa0705710 | 0.835951 | 1.244435e-56 | -8.615850e-47 |
| Msa0276610 | Msa0706130 | 0.820252 | 7.568533e-53 | -8.615850e-47 |
| Msa0276610 | Msa0707270 | 0.806089 | 9.742114e-50 | -8.615850e-47 |
| Msa0276610 | Msa0707880 | 0.800328 | 1.517160e-48 | -8.615850e-47 |
| Msa0276610 | Msa0721650 | 0.807307 | 5.388794e-50 | -8.615850e-47 |
| Msa0276610 | Msa0741600 | 0.802038 | 6.781835e-49 | -8.615850e-47 |
| Msa0276610 | Msa0744690 | 0.810311 | 1.227547e-50 | -8.615850e-47 |
| Msa0276610 | Msa0774560 | 0.820872 | 5.451276e-53 | -8.615850e-47 |
| Msa0276610 | Msa0779830 | 0.808671 | 2.762067e-50 | -8.615850e-47 |
| Msa0276610 | Msa0781030 | 0.811864 | 5.657315e-51 | -8.615850e-47 |
| Msa0276610 | Msa0802270 | 0.804417 | 2.181942e-49 | -8.615850e-47 |
| Msa0276610 | Msa0813630 | 0.802852 | 4.608131e-49 | -8.615850e-47 |
| Msa0276610 | Msa0821030 | 0.835291 | 1.828052e-56 | -8.615850e-47 |
| Msa0276610 | Msa0829110 | 0.835064 | 2.085452e-56 | -8.615850e-47 |
| Msa0276610 | Msa0829430 | 0.814260 | 1.686415e-51 | -8.615850e-47 |
| Msa0276610 | Msa0861400 | 0.807379 | 5.201092e-50 | -8.615850e-47 |
| Msa0276610 | Msa0862750 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0276610 | Msa0872890 | 0.809845 | 1.547293e-50 | -8.615850e-47 |
| Msa0276610 | Msa0898830 | 0.817924 | 2.561874e-52 | -8.615850e-47 |
| Msa0276610 | Msa0967670 | 0.801639 | 8.187774e-49 | -8.615850e-47 |
| Msa0276610 | Msa0967900 | 0.811143 | 8.113596e-51 | -8.615850e-47 |
| Msa0276610 | Msa1006170 | -0.816047 | 6.761840e-52 | -8.615850e-47 |
| Msa0276610 | Msa1035790 | 0.836259 | 1.039021e-56 | -8.615850e-47 |
| Msa0276610 | Msa1044790 | 0.874742 | 5.325949e-68 | -8.615850e-47 |
| Msa0276610 | Msa1056590 | 0.823208 | 1.567710e-53 | -8.615850e-47 |
| Msa0276610 | Msa1069770 | -0.806452 | 8.171314e-50 | -8.615850e-47 |
| Msa0276610 | Msa1078600 | 0.810123 | 1.347847e-50 | -8.615850e-47 |
| Msa0276610 | Msa1078770 | 0.807964 | 3.908043e-50 | -8.615850e-47 |
| Msa0276610 | Msa1104430 | 0.800413 | 1.458434e-48 | -8.615850e-47 |
| Msa0276610 | Msa1107650 | 0.825087 | 5.676002e-54 | -8.615850e-47 |
| Msa0276610 | Msa1109500 | 0.866866 | 2.083334e-65 | -8.615850e-47 |
| Msa0276610 | Msa1116850 | 0.832748 | 7.917582e-56 | -8.615850e-47 |
| Msa0276610 | Msa1117280 | 0.832176 | 1.097661e-55 | -8.615850e-47 |
| Msa0276610 | Msa1143060 | 0.807631 | 4.600686e-50 | -8.615850e-47 |
| Msa0276610 | Msa1144420 | 0.829420 | 5.198900e-55 | -8.615850e-47 |
| Msa0276610 | Msa1145930 | 0.877338 | 6.809875e-69 | -8.615850e-47 |
| Msa0276610 | Msa1149570 | 0.805138 | 1.542724e-49 | -8.615850e-47 |
| Msa0276610 | Msa1154250 | 0.811782 | 5.894229e-51 | -8.615850e-47 |
| Msa0276610 | Msa1181730 | 0.802054 | 6.730453e-49 | -8.615850e-47 |
| Msa0276610 | Msa1182480 | 0.808185 | 3.507151e-50 | -8.615850e-47 |
| Msa0276610 | Msa1224310 | 0.803386 | 3.574016e-49 | -8.615850e-47 |
| Msa0276610 | Msa1272770 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
| Msa0276610 | Msa1297720 | 0.819240 | 1.288508e-52 | -8.615850e-47 |
| Msa0276610 | Msa1327690 | 0.813885 | 2.040698e-51 | -8.615850e-47 |
| Msa0276610 | Msa1341390 | 0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0276610 | Msa1349490 | 0.802235 | 6.176856e-49 | -8.615850e-47 |
| Msa0276610 | Msa1369220 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0276610 | Msa1371060 | 0.819845 | 9.378181e-53 | -8.615850e-47 |
| Msa0276610 | Msa1372470 | 0.815507 | 8.922549e-52 | -8.615850e-47 |
| Msa0276610 | Msa1372570 | 0.810716 | 1.003768e-50 | -8.615850e-47 |
| Msa0276610 | Msa1373990 | -0.806414 | 8.323655e-50 | -8.615850e-47 |
| Msa0276610 | Msa1378840 | 0.815335 | 9.743075e-52 | -8.615850e-47 |
| Msa0276610 | Msa1382100 | 0.809122 | 2.211934e-50 | -8.615850e-47 |
| Msa0276610 | Msa1386020 | 0.802108 | 6.558987e-49 | -8.615850e-47 |
| Msa0276610 | Msa1393550 | 0.801109 | 1.051500e-48 | -8.615850e-47 |
| Msa0276610 | Msa1412830 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0276610 | Msa1414560 | 0.801481 | 8.823318e-49 | -8.615850e-47 |
| Msa0276610 | Msa1422150 | 0.801022 | 1.095473e-48 | -8.615850e-47 |
| Msa0276610 | Msa1426310 | 0.801960 | 7.035298e-49 | -8.615850e-47 |
| Msa0276610 | Msa1434850 | 0.812977 | 3.231256e-51 | -8.615850e-47 |
| Msa0276610 | Msa1456620 | 0.821492 | 3.923004e-53 | -8.615850e-47 |
| Msa0276610 | Msa1463500 | 0.817207 | 3.716787e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276610 | MtrunA17_Chr2g0289251 | 83.954 | 349 | 51 | 5 | 1 | 346 | 80 | 426 | 0.0 | 549 |
| Msa0276610 | MtrunA17_Chr4g0075361 | 52.395 | 334 | 95 | 8 | 15 | 344 | 20 | 293 | 1.99e-86 | 262 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276610 | AT4G22190.1 | 50.000 | 346 | 139 | 12 | 8 | 340 | 61 | 385 | 6.27e-79 | 246 |
Find 95 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACCCGAATTTGAATTT+TGG | 0.155313 | 2_3:+8881056 | Msa0276610:CDS |
| CAATTAGAATTAGTTCTATT+TGG | 0.219303 | 2_3:-8881031 | None:intergenic |
| CCACGACGAACCTGCCATAC+TGG | 0.248414 | 2_3:-8881670 | None:intergenic |
| GCAGACCTGCTTCGTGAAAA+TGG | 0.261675 | 2_3:-8881487 | None:intergenic |
| GGGTCGGGTTGTCGTGTTTC+CGG | 0.264262 | 2_3:-8881509 | None:intergenic |
| GGTTGAGAAGAATCGGGTTC+TGG | 0.282681 | 2_3:-8881250 | None:intergenic |
| CGCCGGAGCAAGATGGTTTC+CGG | 0.293698 | 2_3:+8881772 | Msa0276610:CDS |
| GAGCATCCAAAATTCAAATT+CGG | 0.304556 | 2_3:-8881062 | None:intergenic |
| AAAGATTACGTAGATTAAAA+AGG | 0.307097 | 2_3:-8881981 | None:intergenic |
| TAGTGGTGGGGAGGAGGTGG+AGG | 0.319105 | 2_3:-8881156 | None:intergenic |
| AAACATAGTAACTTCTCATT+AGG | 0.324071 | 2_3:+8882014 | Msa0276610:CDS |
| AAGGTGCACTGTTAACTTTC+CGG | 0.333102 | 2_3:-8881558 | None:intergenic |
| GAGAGTCAAAGTCGAGAAAA+TGG | 0.339110 | 2_3:+8881602 | Msa0276610:CDS |
| TCTGGGACTGATTCAGTAAC+CGG | 0.360550 | 2_3:-8881232 | None:intergenic |
| AGGTGCACTGTTAACTTTCC+GGG | 0.368465 | 2_3:-8881557 | None:intergenic |
| GAGAAAATGGCCAAGTAGTC+CGG | 0.370264 | 2_3:+8881615 | Msa0276610:CDS |
| TATTAGTGGTGGGGAGGAGG+TGG | 0.372565 | 2_3:-8881159 | None:intergenic |
| CTGTTAACTTTCCGGGTAAC+CGG | 0.374939 | 2_3:-8881550 | None:intergenic |
| TGGGTTTGAGTTTAGCGTTT+GGG | 0.379993 | 2_3:-8881197 | None:intergenic |
| TGTTATAGCAGGTGAAGATT+CGG | 0.382646 | 2_3:-8881272 | None:intergenic |
| TCGTCGGCGGTGTGAAGATT+TGG | 0.386133 | 2_3:-8881106 | None:intergenic |
| CAGAGTTGAATATCAATATA+TGG | 0.386208 | 2_3:+8881464 | Msa0276610:CDS |
| GAGTTTAGCGTTTGGGGTGG+TGG | 0.390160 | 2_3:-8881190 | None:intergenic |
| GTTATAGCAGGTGAAGATTC+GGG | 0.392918 | 2_3:-8881271 | None:intergenic |
| AGCATCCAAAATTCAAATTC+GGG | 0.399281 | 2_3:-8881061 | None:intergenic |
| AGCAAGATGGTTTCCGGTGG+TGG | 0.404009 | 2_3:+8881778 | Msa0276610:CDS |
| CCGGCACGACCCGGACTACT+TGG | 0.404390 | 2_3:-8881625 | None:intergenic |
| GTTGAGAAGAATCGGGTTCT+GGG | 0.418879 | 2_3:-8881249 | None:intergenic |
| TTGAATGTTCCGATGTGTAT+TGG | 0.430367 | 2_3:+8881826 | Msa0276610:CDS |
| TGAATGTTCCGATGTGTATT+GGG | 0.434377 | 2_3:+8881827 | Msa0276610:CDS |
| GTTGTGGAAAAGATGGATTT+CGG | 0.438234 | 2_3:-8881084 | None:intergenic |
| ATGGGTTTGAGTTTAGCGTT+TGG | 0.443035 | 2_3:-8881198 | None:intergenic |
| ATGGTTTCCGGTGGTGGTGG+TGG | 0.448203 | 2_3:+8881784 | Msa0276610:CDS |
| CTATTTGGTGATAAAGTTTG+AGG | 0.451999 | 2_3:-8881016 | None:intergenic |
| GTGGTGGGGAGGAGGTGGAG+GGG | 0.458908 | 2_3:-8881154 | None:intergenic |
| AGTTTAGCGTTTGGGGTGGT+GGG | 0.460808 | 2_3:-8881189 | None:intergenic |
| TGGCAGGTTCGTCGTGGTGG+TGG | 0.461306 | 2_3:+8881676 | Msa0276610:CDS |
| AGATTCGGGTTGAGAAGAAT+CGG | 0.472898 | 2_3:-8881257 | None:intergenic |
| TAGCGTTTGGGGTGGTGGGT+CGG | 0.473038 | 2_3:-8881185 | None:intergenic |
| GATTCAGTAACCGGGTTATG+AGG | 0.473763 | 2_3:-8881223 | None:intergenic |
| TCACCGGATCTCCGGTTACC+CGG | 0.473812 | 2_3:+8881539 | Msa0276610:CDS |
| AGATTTGGTTGTGGAAAAGA+TGG | 0.473850 | 2_3:-8881091 | None:intergenic |
| CACGACGAACCTGCCATACT+GGG | 0.482007 | 2_3:-8881669 | None:intergenic |
| CTTTCTCAGCTTCAAAACGT+TGG | 0.490505 | 2_3:+8881314 | Msa0276610:CDS |
| AGTGATGAGAACAGTGCTAT+TGG | 0.497287 | 2_3:+8881874 | Msa0276610:CDS |
| TTTCCGGGTAACCGGAGATC+CGG | 0.503838 | 2_3:-8881542 | None:intergenic |
| CCAAGTAGTCCGGGTCGTGC+CGG | 0.507337 | 2_3:+8881625 | Msa0276610:CDS |
| TCGGAATAGCCCAGTATGGC+AGG | 0.519408 | 2_3:+8881660 | Msa0276610:CDS |
| CATCATCATGATGAAGGAAG+TGG | 0.520374 | 2_3:+8881952 | Msa0276610:CDS |
| GCCGCTGTTAACCGCGGTGG+TGG | 0.523523 | 2_3:+8881910 | Msa0276610:CDS |
| GAAGAAGATTCTGTTATAGC+AGG | 0.526422 | 2_3:-8881283 | None:intergenic |
| AAGATGGTTTCCGGTGGTGG+TGG | 0.526860 | 2_3:+8881781 | Msa0276610:CDS |
| AAGAAGCCACCGTGAGTCGC+CGG | 0.528329 | 2_3:+8881755 | Msa0276610:CDS |
| CACCGGAAACCATCTTGCTC+CGG | 0.536605 | 2_3:-8881774 | None:intergenic |
| AGAAAATGGCCAAGTAGTCC+GGG | 0.536858 | 2_3:+8881616 | Msa0276610:CDS |
| GGGTTTGAGTTTAGCGTTTG+GGG | 0.539250 | 2_3:-8881196 | None:intergenic |
| AGTGGTGGGGAGGAGGTGGA+GGG | 0.543048 | 2_3:-8881155 | None:intergenic |
| ATCATCATGATGAAGGAAGT+GGG | 0.544681 | 2_3:+8881953 | Msa0276610:CDS |
| AGAGAAAGAAAAGAAGAACA+AGG | 0.547468 | 2_3:+8881396 | Msa0276610:CDS |
| ACATGAACACCGGCACGACC+CGG | 0.550885 | 2_3:-8881634 | None:intergenic |
| TTTGAGTTTAGCGTTTGGGG+TGG | 0.554252 | 2_3:-8881193 | None:intergenic |
| GATTCGGGTTGAGAAGAATC+GGG | 0.554470 | 2_3:-8881256 | None:intergenic |
| TCGGTCGGAATAGCCCAGTA+TGG | 0.556659 | 2_3:+8881656 | Msa0276610:CDS |
| GAGTGTCATCATCATGATGA+AGG | 0.557240 | 2_3:+8881946 | Msa0276610:CDS |
| GTTAACCGCGGTGGTGGTGA+CGG | 0.558352 | 2_3:+8881916 | Msa0276610:CDS |
| GTGCCGGTGTTCATGTCGGT+CGG | 0.562023 | 2_3:+8881641 | Msa0276610:CDS |
| CGTGAGTCGCCGGAGCAAGA+TGG | 0.564778 | 2_3:+8881765 | Msa0276610:CDS |
| GTAACCGGGTTATGAGGTGA+TGG | 0.569503 | 2_3:-8881217 | None:intergenic |
| CTGGGACTGATTCAGTAACC+GGG | 0.591037 | 2_3:-8881231 | None:intergenic |
| TAACCGGGTTATGAGGTGAT+GGG | 0.591241 | 2_3:-8881216 | None:intergenic |
| CATCTTGCTCCGGCGACTCA+CGG | 0.592831 | 2_3:-8881764 | None:intergenic |
| GTATGGCAGGTTCGTCGTGG+TGG | 0.592873 | 2_3:+8881673 | Msa0276610:CDS |
| GGTCGTGCCGGTGTTCATGT+CGG | 0.593131 | 2_3:+8881637 | Msa0276610:CDS |
| AACAGTGCTATTGGTGTGAG+TGG | 0.596379 | 2_3:+8881883 | Msa0276610:CDS |
| GCGGAGTTGCTACGAGAACA+AGG | 0.601840 | 2_3:-8881577 | None:intergenic |
| AAACCCATCACCTCATAACC+CGG | 0.607262 | 2_3:+8881213 | Msa0276610:CDS |
| ACCACCACCGCGGTTAACAG+CGG | 0.612771 | 2_3:-8881911 | None:intergenic |
| ATTCCGACCGACATGAACAC+CGG | 0.626898 | 2_3:-8881644 | None:intergenic |
| TCATCATGATGAAGGAAGTG+GGG | 0.641886 | 2_3:+8881954 | Msa0276610:CDS |
| AGTGCTATTGGTGTGAGTGG+TGG | 0.642461 | 2_3:+8881886 | Msa0276610:CDS |
| TCAGAGCAACAAACGCAACA+AGG | 0.643482 | 2_3:+8881706 | Msa0276610:CDS |
| CGGAGCAAGATGGTTTCCGG+TGG | 0.646220 | 2_3:+8881775 | Msa0276610:CDS |
| CCAGTATGGCAGGTTCGTCG+TGG | 0.656318 | 2_3:+8881670 | Msa0276610:CDS |
| TGTTCTCGTAGCAACTCCGC+CGG | 0.659178 | 2_3:+8881580 | Msa0276610:CDS |
| GGCGCCGCTGTTAACCGCGG+TGG | 0.664217 | 2_3:+8881907 | Msa0276610:CDS |
| CATCATGATGAAGGAAGTGG+GGG | 0.665659 | 2_3:+8881955 | Msa0276610:CDS |
| GGTGGCGCCGCTGTTAACCG+CGG | 0.667871 | 2_3:+8881904 | Msa0276610:CDS |
| ACCGTCGACGAAAAGTTCGT+CGG | 0.668584 | 2_3:-8881122 | None:intergenic |
| TCTCGACTTTGACTCTCCGG+CGG | 0.671127 | 2_3:-8881596 | None:intergenic |
| GCGGTGTGAAGATTTGGTTG+TGG | 0.676329 | 2_3:-8881100 | None:intergenic |
| AACCGCGGTGGTGGTGACGG+TGG | 0.686027 | 2_3:+8881919 | Msa0276610:CDS |
| GTCGACGAAAAGTTCGTCGG+CGG | 0.706404 | 2_3:-8881119 | None:intergenic |
| CTTGCTCCGGCGACTCACGG+TGG | 0.708798 | 2_3:-8881761 | None:intergenic |
| TGTCTATACCCAATACACAT+CGG | 0.715009 | 2_3:-8881835 | None:intergenic |
| TACCACCGTCACCACCACCG+CGG | 0.769688 | 2_3:-8881921 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTAGAATTAGTTCTATT+TGG | - | chr2_3:8881034-8881053 | None:intergenic | 20.0% |
| !! | AAAGATTACGTAGATTAAAA+AGG | - | chr2_3:8881984-8882003 | None:intergenic | 20.0% |
| !!! | CAATTAGAATTAGTTCTATT+TGG | - | chr2_3:8881034-8881053 | None:intergenic | 20.0% |
| !! | AAAGATTACGTAGATTAAAA+AGG | - | chr2_3:8881984-8882003 | None:intergenic | 20.0% |
| !! | TGGAAAGATATTTTCAGAAA+AGG | + | chr2_3:8881334-8881353 | Msa0276610:CDS | 25.0% |
| ! | AAGAAGAAAGAGAGAAAAAA+CGG | + | chr2_3:8881421-8881440 | Msa0276610:CDS | 25.0% |
| ! | CAGAGTTGAATATCAATATA+TGG | + | chr2_3:8881464-8881483 | Msa0276610:CDS | 25.0% |
| !! | AGAAGTTACTATGTTTTTCT+TGG | - | chr2_3:8882010-8882029 | None:intergenic | 25.0% |
| !! | TGGAAAGATATTTTCAGAAA+AGG | + | chr2_3:8881334-8881353 | Msa0276610:CDS | 25.0% |
| ! | AAGAAGAAAGAGAGAAAAAA+CGG | + | chr2_3:8881421-8881440 | Msa0276610:CDS | 25.0% |
| ! | CAGAGTTGAATATCAATATA+TGG | + | chr2_3:8881464-8881483 | Msa0276610:CDS | 25.0% |
| !! | AGAAGTTACTATGTTTTTCT+TGG | - | chr2_3:8882010-8882029 | None:intergenic | 25.0% |
| ! | CTATTTGGTGATAAAGTTTG+AGG | - | chr2_3:8881019-8881038 | None:intergenic | 30.0% |
| ! | ATTCACCCGAATTTGAATTT+TGG | + | chr2_3:8881056-8881075 | Msa0276610:CDS | 30.0% |
| AGCATCCAAAATTCAAATTC+GGG | - | chr2_3:8881064-8881083 | None:intergenic | 30.0% | |
| GAGCATCCAAAATTCAAATT+CGG | - | chr2_3:8881065-8881084 | None:intergenic | 30.0% | |
| AGAGAAAGAAAAGAAGAACA+AGG | + | chr2_3:8881396-8881415 | Msa0276610:CDS | 30.0% | |
| AAAGAGAGAAAAAACGGTAA+CGG | + | chr2_3:8881427-8881446 | Msa0276610:CDS | 30.0% | |
| ! | CTATTTGGTGATAAAGTTTG+AGG | - | chr2_3:8881019-8881038 | None:intergenic | 30.0% |
| ! | ATTCACCCGAATTTGAATTT+TGG | + | chr2_3:8881056-8881075 | Msa0276610:CDS | 30.0% |
| AGCATCCAAAATTCAAATTC+GGG | - | chr2_3:8881064-8881083 | None:intergenic | 30.0% | |
| GAGCATCCAAAATTCAAATT+CGG | - | chr2_3:8881065-8881084 | None:intergenic | 30.0% | |
| AGAGAAAGAAAAGAAGAACA+AGG | + | chr2_3:8881396-8881415 | Msa0276610:CDS | 30.0% | |
| AAAGAGAGAAAAAACGGTAA+CGG | + | chr2_3:8881427-8881446 | Msa0276610:CDS | 30.0% | |
| ! | GTTGTGGAAAAGATGGATTT+CGG | - | chr2_3:8881087-8881106 | None:intergenic | 35.0% |
| ! | AGATTTGGTTGTGGAAAAGA+TGG | - | chr2_3:8881094-8881113 | None:intergenic | 35.0% |
| TGTTATAGCAGGTGAAGATT+CGG | - | chr2_3:8881275-8881294 | None:intergenic | 35.0% | |
| GAAGAAGATTCTGTTATAGC+AGG | - | chr2_3:8881286-8881305 | None:intergenic | 35.0% | |
| TTGAATGTTCCGATGTGTAT+TGG | + | chr2_3:8881826-8881845 | Msa0276610:CDS | 35.0% | |
| TGAATGTTCCGATGTGTATT+GGG | + | chr2_3:8881827-8881846 | Msa0276610:CDS | 35.0% | |
| TGTCTATACCCAATACACAT+CGG | - | chr2_3:8881838-8881857 | None:intergenic | 35.0% | |
| ATCATCATGATGAAGGAAGT+GGG | + | chr2_3:8881953-8881972 | Msa0276610:CDS | 35.0% | |
| ! | GTTGTGGAAAAGATGGATTT+CGG | - | chr2_3:8881087-8881106 | None:intergenic | 35.0% |
| ! | AGATTTGGTTGTGGAAAAGA+TGG | - | chr2_3:8881094-8881113 | None:intergenic | 35.0% |
| TGTTATAGCAGGTGAAGATT+CGG | - | chr2_3:8881275-8881294 | None:intergenic | 35.0% | |
| GAAGAAGATTCTGTTATAGC+AGG | - | chr2_3:8881286-8881305 | None:intergenic | 35.0% | |
| TTGAATGTTCCGATGTGTAT+TGG | + | chr2_3:8881826-8881845 | Msa0276610:CDS | 35.0% | |
| TGAATGTTCCGATGTGTATT+GGG | + | chr2_3:8881827-8881846 | Msa0276610:CDS | 35.0% | |
| TGTCTATACCCAATACACAT+CGG | - | chr2_3:8881838-8881857 | None:intergenic | 35.0% | |
| ATCATCATGATGAAGGAAGT+GGG | + | chr2_3:8881953-8881972 | Msa0276610:CDS | 35.0% | |
| ! | TGGGTTTGAGTTTAGCGTTT+GGG | - | chr2_3:8881200-8881219 | None:intergenic | 40.0% |
| ! | ATGGGTTTGAGTTTAGCGTT+TGG | - | chr2_3:8881201-8881220 | None:intergenic | 40.0% |
| !! | AGATTCGGGTTGAGAAGAAT+CGG | - | chr2_3:8881260-8881279 | None:intergenic | 40.0% |
| GTTATAGCAGGTGAAGATTC+GGG | - | chr2_3:8881274-8881293 | None:intergenic | 40.0% | |
| CTTTCTCAGCTTCAAAACGT+TGG | + | chr2_3:8881314-8881333 | Msa0276610:CDS | 40.0% | |
| ATCCGGTGAAAAATTTGGGT+CGG | - | chr2_3:8881528-8881547 | None:intergenic | 40.0% | |
| GGAGATCCGGTGAAAAATTT+GGG | - | chr2_3:8881532-8881551 | None:intergenic | 40.0% | |
| ! | CAAATTTTTCACCGGATCTC+CGG | + | chr2_3:8881531-8881550 | Msa0276610:CDS | 40.0% |
| AAGGTGCACTGTTAACTTTC+CGG | - | chr2_3:8881561-8881580 | None:intergenic | 40.0% | |
| ! | TTTTCTCGACTTTGACTCTC+CGG | - | chr2_3:8881602-8881621 | None:intergenic | 40.0% |
| GAGAGTCAAAGTCGAGAAAA+TGG | + | chr2_3:8881602-8881621 | Msa0276610:CDS | 40.0% | |
| AGTGATGAGAACAGTGCTAT+TGG | + | chr2_3:8881874-8881893 | Msa0276610:CDS | 40.0% | |
| GAGTGTCATCATCATGATGA+AGG | + | chr2_3:8881946-8881965 | Msa0276610:CDS | 40.0% | |
| CATCATCATGATGAAGGAAG+TGG | + | chr2_3:8881952-8881971 | Msa0276610:CDS | 40.0% | |
| TCATCATGATGAAGGAAGTG+GGG | + | chr2_3:8881954-8881973 | Msa0276610:CDS | 40.0% | |
| ! | TGGGTTTGAGTTTAGCGTTT+GGG | - | chr2_3:8881200-8881219 | None:intergenic | 40.0% |
| ! | ATGGGTTTGAGTTTAGCGTT+TGG | - | chr2_3:8881201-8881220 | None:intergenic | 40.0% |
| !! | AGATTCGGGTTGAGAAGAAT+CGG | - | chr2_3:8881260-8881279 | None:intergenic | 40.0% |
| GTTATAGCAGGTGAAGATTC+GGG | - | chr2_3:8881274-8881293 | None:intergenic | 40.0% | |
| CTTTCTCAGCTTCAAAACGT+TGG | + | chr2_3:8881314-8881333 | Msa0276610:CDS | 40.0% | |
| ATCCGGTGAAAAATTTGGGT+CGG | - | chr2_3:8881528-8881547 | None:intergenic | 40.0% | |
| GGAGATCCGGTGAAAAATTT+GGG | - | chr2_3:8881532-8881551 | None:intergenic | 40.0% | |
| ! | CAAATTTTTCACCGGATCTC+CGG | + | chr2_3:8881531-8881550 | Msa0276610:CDS | 40.0% |
| AAGGTGCACTGTTAACTTTC+CGG | - | chr2_3:8881561-8881580 | None:intergenic | 40.0% | |
| ! | TTTTCTCGACTTTGACTCTC+CGG | - | chr2_3:8881602-8881621 | None:intergenic | 40.0% |
| GAGAGTCAAAGTCGAGAAAA+TGG | + | chr2_3:8881602-8881621 | Msa0276610:CDS | 40.0% | |
| AGTGATGAGAACAGTGCTAT+TGG | + | chr2_3:8881874-8881893 | Msa0276610:CDS | 40.0% | |
| GAGTGTCATCATCATGATGA+AGG | + | chr2_3:8881946-8881965 | Msa0276610:CDS | 40.0% | |
| CATCATCATGATGAAGGAAG+TGG | + | chr2_3:8881952-8881971 | Msa0276610:CDS | 40.0% | |
| TCATCATGATGAAGGAAGTG+GGG | + | chr2_3:8881954-8881973 | Msa0276610:CDS | 40.0% | |
| !! | TTTTATTAGTGGTGGGGAGG+AGG | - | chr2_3:8881165-8881184 | None:intergenic | 45.0% |
| !!! | GGTCGGTTTTATTAGTGGTG+GGG | - | chr2_3:8881171-8881190 | None:intergenic | 45.0% |
| !!! | GGGTCGGTTTTATTAGTGGT+GGG | - | chr2_3:8881172-8881191 | None:intergenic | 45.0% |
| !!! | TGGGTCGGTTTTATTAGTGG+TGG | - | chr2_3:8881173-8881192 | None:intergenic | 45.0% |
| !!! | TGGTGGGTCGGTTTTATTAG+TGG | - | chr2_3:8881176-8881195 | None:intergenic | 45.0% |
| ! | TTTGAGTTTAGCGTTTGGGG+TGG | - | chr2_3:8881196-8881215 | None:intergenic | 45.0% |
| ! | GGGTTTGAGTTTAGCGTTTG+GGG | - | chr2_3:8881199-8881218 | None:intergenic | 45.0% |
| AAACCCATCACCTCATAACC+CGG | + | chr2_3:8881213-8881232 | Msa0276610:CDS | 45.0% | |
| TAACCGGGTTATGAGGTGAT+GGG | - | chr2_3:8881219-8881238 | None:intergenic | 45.0% | |
| GATTCAGTAACCGGGTTATG+AGG | - | chr2_3:8881226-8881245 | None:intergenic | 45.0% | |
| ! | TCTGGGACTGATTCAGTAAC+CGG | - | chr2_3:8881235-8881254 | None:intergenic | 45.0% |
| GTTGAGAAGAATCGGGTTCT+GGG | - | chr2_3:8881252-8881271 | None:intergenic | 45.0% | |
| !! | GATTCGGGTTGAGAAGAATC+GGG | - | chr2_3:8881259-8881278 | None:intergenic | 45.0% |
| !! | TATGGCCATTTTCACGAAGC+AGG | + | chr2_3:8881482-8881501 | Msa0276610:CDS | 45.0% |
| ! | ACCCGACCCAAATTTTTCAC+CGG | + | chr2_3:8881523-8881542 | Msa0276610:CDS | 45.0% |
| TCCGGTGAAAAATTTGGGTC+GGG | - | chr2_3:8881527-8881546 | None:intergenic | 45.0% | |
| CGGAGATCCGGTGAAAAATT+TGG | - | chr2_3:8881533-8881552 | None:intergenic | 45.0% | |
| CTGTTAACTTTCCGGGTAAC+CGG | - | chr2_3:8881553-8881572 | None:intergenic | 45.0% | |
| AGGTGCACTGTTAACTTTCC+GGG | - | chr2_3:8881560-8881579 | None:intergenic | 45.0% | |
| GAGAAAATGGCCAAGTAGTC+CGG | + | chr2_3:8881615-8881634 | Msa0276610:CDS | 45.0% | |
| AGAAAATGGCCAAGTAGTCC+GGG | + | chr2_3:8881616-8881635 | Msa0276610:CDS | 45.0% | |
| TCAGAGCAACAAACGCAACA+AGG | + | chr2_3:8881706-8881725 | Msa0276610:CDS | 45.0% | |
| ! | AACAGTGCTATTGGTGTGAG+TGG | + | chr2_3:8881883-8881902 | Msa0276610:CDS | 45.0% |
| CATCATGATGAAGGAAGTGG+GGG | + | chr2_3:8881955-8881974 | Msa0276610:CDS | 45.0% | |
| !! | TTTTATTAGTGGTGGGGAGG+AGG | - | chr2_3:8881165-8881184 | None:intergenic | 45.0% |
| !!! | GGTCGGTTTTATTAGTGGTG+GGG | - | chr2_3:8881171-8881190 | None:intergenic | 45.0% |
| !!! | GGGTCGGTTTTATTAGTGGT+GGG | - | chr2_3:8881172-8881191 | None:intergenic | 45.0% |
| !!! | TGGGTCGGTTTTATTAGTGG+TGG | - | chr2_3:8881173-8881192 | None:intergenic | 45.0% |
| !!! | TGGTGGGTCGGTTTTATTAG+TGG | - | chr2_3:8881176-8881195 | None:intergenic | 45.0% |
| ! | TTTGAGTTTAGCGTTTGGGG+TGG | - | chr2_3:8881196-8881215 | None:intergenic | 45.0% |
| ! | GGGTTTGAGTTTAGCGTTTG+GGG | - | chr2_3:8881199-8881218 | None:intergenic | 45.0% |
| AAACCCATCACCTCATAACC+CGG | + | chr2_3:8881213-8881232 | Msa0276610:CDS | 45.0% | |
| TAACCGGGTTATGAGGTGAT+GGG | - | chr2_3:8881219-8881238 | None:intergenic | 45.0% | |
| GATTCAGTAACCGGGTTATG+AGG | - | chr2_3:8881226-8881245 | None:intergenic | 45.0% | |
| ! | TCTGGGACTGATTCAGTAAC+CGG | - | chr2_3:8881235-8881254 | None:intergenic | 45.0% |
| GTTGAGAAGAATCGGGTTCT+GGG | - | chr2_3:8881252-8881271 | None:intergenic | 45.0% | |
| !! | GATTCGGGTTGAGAAGAATC+GGG | - | chr2_3:8881259-8881278 | None:intergenic | 45.0% |
| !! | TATGGCCATTTTCACGAAGC+AGG | + | chr2_3:8881482-8881501 | Msa0276610:CDS | 45.0% |
| ! | ACCCGACCCAAATTTTTCAC+CGG | + | chr2_3:8881523-8881542 | Msa0276610:CDS | 45.0% |
| TCCGGTGAAAAATTTGGGTC+GGG | - | chr2_3:8881527-8881546 | None:intergenic | 45.0% | |
| CGGAGATCCGGTGAAAAATT+TGG | - | chr2_3:8881533-8881552 | None:intergenic | 45.0% | |
| CTGTTAACTTTCCGGGTAAC+CGG | - | chr2_3:8881553-8881572 | None:intergenic | 45.0% | |
| AGGTGCACTGTTAACTTTCC+GGG | - | chr2_3:8881560-8881579 | None:intergenic | 45.0% | |
| GAGAAAATGGCCAAGTAGTC+CGG | + | chr2_3:8881615-8881634 | Msa0276610:CDS | 45.0% | |
| AGAAAATGGCCAAGTAGTCC+GGG | + | chr2_3:8881616-8881635 | Msa0276610:CDS | 45.0% | |
| TCAGAGCAACAAACGCAACA+AGG | + | chr2_3:8881706-8881725 | Msa0276610:CDS | 45.0% | |
| ! | AACAGTGCTATTGGTGTGAG+TGG | + | chr2_3:8881883-8881902 | Msa0276610:CDS | 45.0% |
| CATCATGATGAAGGAAGTGG+GGG | + | chr2_3:8881955-8881974 | Msa0276610:CDS | 45.0% | |
| ! | GCGGTGTGAAGATTTGGTTG+TGG | - | chr2_3:8881103-8881122 | None:intergenic | 50.0% |
| ACCGTCGACGAAAAGTTCGT+CGG | - | chr2_3:8881125-8881144 | None:intergenic | 50.0% | |
| !!! | CGGTTTTATTAGTGGTGGGG+AGG | - | chr2_3:8881168-8881187 | None:intergenic | 50.0% |
| ! | AGTTTAGCGTTTGGGGTGGT+GGG | - | chr2_3:8881192-8881211 | None:intergenic | 50.0% |
| GTAACCGGGTTATGAGGTGA+TGG | - | chr2_3:8881220-8881239 | None:intergenic | 50.0% | |
| ! | CTGGGACTGATTCAGTAACC+GGG | - | chr2_3:8881234-8881253 | None:intergenic | 50.0% |
| GGTTGAGAAGAATCGGGTTC+TGG | - | chr2_3:8881253-8881272 | None:intergenic | 50.0% | |
| GCAGACCTGCTTCGTGAAAA+TGG | - | chr2_3:8881490-8881509 | None:intergenic | 50.0% | |
| ! | TTTTCACGAAGCAGGTCTGC+CGG | + | chr2_3:8881490-8881509 | Msa0276610:CDS | 50.0% |
| ATTCCGACCGACATGAACAC+CGG | - | chr2_3:8881647-8881666 | None:intergenic | 50.0% | |
| ! | AGTGCTATTGGTGTGAGTGG+TGG | + | chr2_3:8881886-8881905 | Msa0276610:CDS | 50.0% |
| ! | GCGGTGTGAAGATTTGGTTG+TGG | - | chr2_3:8881103-8881122 | None:intergenic | 50.0% |
| ACCGTCGACGAAAAGTTCGT+CGG | - | chr2_3:8881125-8881144 | None:intergenic | 50.0% | |
| !!! | CGGTTTTATTAGTGGTGGGG+AGG | - | chr2_3:8881168-8881187 | None:intergenic | 50.0% |
| ! | AGTTTAGCGTTTGGGGTGGT+GGG | - | chr2_3:8881192-8881211 | None:intergenic | 50.0% |
| GTAACCGGGTTATGAGGTGA+TGG | - | chr2_3:8881220-8881239 | None:intergenic | 50.0% | |
| ! | CTGGGACTGATTCAGTAACC+GGG | - | chr2_3:8881234-8881253 | None:intergenic | 50.0% |
| GGTTGAGAAGAATCGGGTTC+TGG | - | chr2_3:8881253-8881272 | None:intergenic | 50.0% | |
| GCAGACCTGCTTCGTGAAAA+TGG | - | chr2_3:8881490-8881509 | None:intergenic | 50.0% | |
| ! | TTTTCACGAAGCAGGTCTGC+CGG | + | chr2_3:8881490-8881509 | Msa0276610:CDS | 50.0% |
| ATTCCGACCGACATGAACAC+CGG | - | chr2_3:8881647-8881666 | None:intergenic | 50.0% | |
| ! | AGTGCTATTGGTGTGAGTGG+TGG | + | chr2_3:8881886-8881905 | Msa0276610:CDS | 50.0% |
| TCGTCGGCGGTGTGAAGATT+TGG | - | chr2_3:8881109-8881128 | None:intergenic | 55.0% | |
| GTCGACGAAAAGTTCGTCGG+CGG | - | chr2_3:8881122-8881141 | None:intergenic | 55.0% | |
| ! | GCCGACGAACTTTTCGTCGA+CGG | + | chr2_3:8881121-8881140 | Msa0276610:CDS | 55.0% |
| ! | TATTAGTGGTGGGGAGGAGG+TGG | - | chr2_3:8881162-8881181 | None:intergenic | 55.0% |
| ! | GAGTTTAGCGTTTGGGGTGG+TGG | - | chr2_3:8881193-8881212 | None:intergenic | 55.0% |
| TTTCCGGGTAACCGGAGATC+CGG | - | chr2_3:8881545-8881564 | None:intergenic | 55.0% | |
| GCGGAGTTGCTACGAGAACA+AGG | - | chr2_3:8881580-8881599 | None:intergenic | 55.0% | |
| TGTTCTCGTAGCAACTCCGC+CGG | + | chr2_3:8881580-8881599 | Msa0276610:CDS | 55.0% | |
| TCTCGACTTTGACTCTCCGG+CGG | - | chr2_3:8881599-8881618 | None:intergenic | 55.0% | |
| TCGGTCGGAATAGCCCAGTA+TGG | + | chr2_3:8881656-8881675 | Msa0276610:CDS | 55.0% | |
| TCGGAATAGCCCAGTATGGC+AGG | + | chr2_3:8881660-8881679 | Msa0276610:CDS | 55.0% | |
| CACGACGAACCTGCCATACT+GGG | - | chr2_3:8881672-8881691 | None:intergenic | 55.0% | |
| CACCGGAAACCATCTTGCTC+CGG | - | chr2_3:8881777-8881796 | None:intergenic | 55.0% | |
| AGCAAGATGGTTTCCGGTGG+TGG | + | chr2_3:8881778-8881797 | Msa0276610:CDS | 55.0% | |
| ! | AAGATGGTTTCCGGTGGTGG+TGG | + | chr2_3:8881781-8881800 | Msa0276610:CDS | 55.0% |
| ! | AGCTTTTCCACCACCACCAC+CGG | - | chr2_3:8881794-8881813 | None:intergenic | 55.0% |
| TCGTCGGCGGTGTGAAGATT+TGG | - | chr2_3:8881109-8881128 | None:intergenic | 55.0% | |
| GTCGACGAAAAGTTCGTCGG+CGG | - | chr2_3:8881122-8881141 | None:intergenic | 55.0% | |
| ! | GCCGACGAACTTTTCGTCGA+CGG | + | chr2_3:8881121-8881140 | Msa0276610:CDS | 55.0% |
| ! | TATTAGTGGTGGGGAGGAGG+TGG | - | chr2_3:8881162-8881181 | None:intergenic | 55.0% |
| ! | GAGTTTAGCGTTTGGGGTGG+TGG | - | chr2_3:8881193-8881212 | None:intergenic | 55.0% |
| TTTCCGGGTAACCGGAGATC+CGG | - | chr2_3:8881545-8881564 | None:intergenic | 55.0% | |
| GCGGAGTTGCTACGAGAACA+AGG | - | chr2_3:8881580-8881599 | None:intergenic | 55.0% | |
| TGTTCTCGTAGCAACTCCGC+CGG | + | chr2_3:8881580-8881599 | Msa0276610:CDS | 55.0% | |
| TCTCGACTTTGACTCTCCGG+CGG | - | chr2_3:8881599-8881618 | None:intergenic | 55.0% | |
| TCGGTCGGAATAGCCCAGTA+TGG | + | chr2_3:8881656-8881675 | Msa0276610:CDS | 55.0% | |
| TCGGAATAGCCCAGTATGGC+AGG | + | chr2_3:8881660-8881679 | Msa0276610:CDS | 55.0% | |
| CACGACGAACCTGCCATACT+GGG | - | chr2_3:8881672-8881691 | None:intergenic | 55.0% | |
| CACCGGAAACCATCTTGCTC+CGG | - | chr2_3:8881777-8881796 | None:intergenic | 55.0% | |
| AGCAAGATGGTTTCCGGTGG+TGG | + | chr2_3:8881778-8881797 | Msa0276610:CDS | 55.0% | |
| ! | AAGATGGTTTCCGGTGGTGG+TGG | + | chr2_3:8881781-8881800 | Msa0276610:CDS | 55.0% |
| ! | AGCTTTTCCACCACCACCAC+CGG | - | chr2_3:8881794-8881813 | None:intergenic | 55.0% |
| !! | TAGCGTTTGGGGTGGTGGGT+CGG | - | chr2_3:8881188-8881207 | None:intergenic | 60.0% |
| ! | GGGTCGGGTTGTCGTGTTTC+CGG | - | chr2_3:8881512-8881531 | None:intergenic | 60.0% |
| TCACCGGATCTCCGGTTACC+CGG | + | chr2_3:8881539-8881558 | Msa0276610:CDS | 60.0% | |
| ACATGAACACCGGCACGACC+CGG | - | chr2_3:8881637-8881656 | None:intergenic | 60.0% | |
| ! | GGTCGTGCCGGTGTTCATGT+CGG | + | chr2_3:8881637-8881656 | Msa0276610:CDS | 60.0% |
| ! | GTGCCGGTGTTCATGTCGGT+CGG | + | chr2_3:8881641-8881660 | Msa0276610:CDS | 60.0% |
| CCACGACGAACCTGCCATAC+TGG | - | chr2_3:8881673-8881692 | None:intergenic | 60.0% | |
| CCAGTATGGCAGGTTCGTCG+TGG | + | chr2_3:8881670-8881689 | Msa0276610:CDS | 60.0% | |
| GTATGGCAGGTTCGTCGTGG+TGG | + | chr2_3:8881673-8881692 | Msa0276610:CDS | 60.0% | |
| AAGAAGCCACCGTGAGTCGC+CGG | + | chr2_3:8881755-8881774 | Msa0276610:CDS | 60.0% | |
| CATCTTGCTCCGGCGACTCA+CGG | - | chr2_3:8881767-8881786 | None:intergenic | 60.0% | |
| CGCCGGAGCAAGATGGTTTC+CGG | + | chr2_3:8881772-8881791 | Msa0276610:CDS | 60.0% | |
| CGGAGCAAGATGGTTTCCGG+TGG | + | chr2_3:8881775-8881794 | Msa0276610:CDS | 60.0% | |
| !! | ATGGTTTCCGGTGGTGGTGG+TGG | + | chr2_3:8881784-8881803 | Msa0276610:CDS | 60.0% |
| ACCACCACCGCGGTTAACAG+CGG | - | chr2_3:8881914-8881933 | None:intergenic | 60.0% | |
| ! | GTTAACCGCGGTGGTGGTGA+CGG | + | chr2_3:8881916-8881935 | Msa0276610:CDS | 60.0% |
| !! | TAGCGTTTGGGGTGGTGGGT+CGG | - | chr2_3:8881188-8881207 | None:intergenic | 60.0% |
| ! | GGGTCGGGTTGTCGTGTTTC+CGG | - | chr2_3:8881512-8881531 | None:intergenic | 60.0% |
| TCACCGGATCTCCGGTTACC+CGG | + | chr2_3:8881539-8881558 | Msa0276610:CDS | 60.0% | |
| ACATGAACACCGGCACGACC+CGG | - | chr2_3:8881637-8881656 | None:intergenic | 60.0% | |
| ! | GGTCGTGCCGGTGTTCATGT+CGG | + | chr2_3:8881637-8881656 | Msa0276610:CDS | 60.0% |
| ! | GTGCCGGTGTTCATGTCGGT+CGG | + | chr2_3:8881641-8881660 | Msa0276610:CDS | 60.0% |
| CCACGACGAACCTGCCATAC+TGG | - | chr2_3:8881673-8881692 | None:intergenic | 60.0% | |
| CCAGTATGGCAGGTTCGTCG+TGG | + | chr2_3:8881670-8881689 | Msa0276610:CDS | 60.0% | |
| GTATGGCAGGTTCGTCGTGG+TGG | + | chr2_3:8881673-8881692 | Msa0276610:CDS | 60.0% | |
| AAGAAGCCACCGTGAGTCGC+CGG | + | chr2_3:8881755-8881774 | Msa0276610:CDS | 60.0% | |
| CATCTTGCTCCGGCGACTCA+CGG | - | chr2_3:8881767-8881786 | None:intergenic | 60.0% | |
| CGCCGGAGCAAGATGGTTTC+CGG | + | chr2_3:8881772-8881791 | Msa0276610:CDS | 60.0% | |
| CGGAGCAAGATGGTTTCCGG+TGG | + | chr2_3:8881775-8881794 | Msa0276610:CDS | 60.0% | |
| !! | ATGGTTTCCGGTGGTGGTGG+TGG | + | chr2_3:8881784-8881803 | Msa0276610:CDS | 60.0% |
| ACCACCACCGCGGTTAACAG+CGG | - | chr2_3:8881914-8881933 | None:intergenic | 60.0% | |
| ! | GTTAACCGCGGTGGTGGTGA+CGG | + | chr2_3:8881916-8881935 | Msa0276610:CDS | 60.0% |
| ! | AGTGGTGGGGAGGAGGTGGA+GGG | - | chr2_3:8881158-8881177 | None:intergenic | 65.0% |
| ! | TAGTGGTGGGGAGGAGGTGG+AGG | - | chr2_3:8881159-8881178 | None:intergenic | 65.0% |
| CCAAGTAGTCCGGGTCGTGC+CGG | + | chr2_3:8881625-8881644 | Msa0276610:CDS | 65.0% | |
| TGGCAGGTTCGTCGTGGTGG+TGG | + | chr2_3:8881676-8881695 | Msa0276610:CDS | 65.0% | |
| CGTGAGTCGCCGGAGCAAGA+TGG | + | chr2_3:8881765-8881784 | Msa0276610:CDS | 65.0% | |
| TACCACCGTCACCACCACCG+CGG | - | chr2_3:8881924-8881943 | None:intergenic | 65.0% | |
| ! | AGTGGTGGGGAGGAGGTGGA+GGG | - | chr2_3:8881158-8881177 | None:intergenic | 65.0% |
| ! | TAGTGGTGGGGAGGAGGTGG+AGG | - | chr2_3:8881159-8881178 | None:intergenic | 65.0% |
| CCAAGTAGTCCGGGTCGTGC+CGG | + | chr2_3:8881625-8881644 | Msa0276610:CDS | 65.0% | |
| TGGCAGGTTCGTCGTGGTGG+TGG | + | chr2_3:8881676-8881695 | Msa0276610:CDS | 65.0% | |
| CGTGAGTCGCCGGAGCAAGA+TGG | + | chr2_3:8881765-8881784 | Msa0276610:CDS | 65.0% | |
| TACCACCGTCACCACCACCG+CGG | - | chr2_3:8881924-8881943 | None:intergenic | 65.0% | |
| ! | GTGGTGGGGAGGAGGTGGAG+GGG | - | chr2_3:8881157-8881176 | None:intergenic | 70.0% |
| CCGGCACGACCCGGACTACT+TGG | - | chr2_3:8881628-8881647 | None:intergenic | 70.0% | |
| CTTGCTCCGGCGACTCACGG+TGG | - | chr2_3:8881764-8881783 | None:intergenic | 70.0% | |
| GGTGGCGCCGCTGTTAACCG+CGG | + | chr2_3:8881904-8881923 | Msa0276610:CDS | 70.0% | |
| GCCGCTGTTAACCGCGGTGG+TGG | + | chr2_3:8881910-8881929 | Msa0276610:CDS | 70.0% | |
| !! | AACCGCGGTGGTGGTGACGG+TGG | + | chr2_3:8881919-8881938 | Msa0276610:CDS | 70.0% |
| ! | GTGGTGGGGAGGAGGTGGAG+GGG | - | chr2_3:8881157-8881176 | None:intergenic | 70.0% |
| CCGGCACGACCCGGACTACT+TGG | - | chr2_3:8881628-8881647 | None:intergenic | 70.0% | |
| CTTGCTCCGGCGACTCACGG+TGG | - | chr2_3:8881764-8881783 | None:intergenic | 70.0% | |
| GGTGGCGCCGCTGTTAACCG+CGG | + | chr2_3:8881904-8881923 | Msa0276610:CDS | 70.0% | |
| GCCGCTGTTAACCGCGGTGG+TGG | + | chr2_3:8881910-8881929 | Msa0276610:CDS | 70.0% | |
| !! | AACCGCGGTGGTGGTGACGG+TGG | + | chr2_3:8881919-8881938 | Msa0276610:CDS | 70.0% |
| GGCGCCGCTGTTAACCGCGG+TGG | + | chr2_3:8881907-8881926 | Msa0276610:CDS | 75.0% | |
| GGCGCCGCTGTTAACCGCGG+TGG | + | chr2_3:8881907-8881926 | Msa0276610:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 8880995 | 8882035 | 8880995 | ID=Msa0276610;Name=Msa0276610 |
| chr2_3 | mRNA | 8880995 | 8882035 | 8880995 | ID=Msa0276610-mRNA-1;Parent=Msa0276610;Name=Msa0276610-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|346 |
| chr2_3 | exon | 8880995 | 8882035 | 8880995 | ID=Msa0276610-mRNA-1:exon:3968;Parent=Msa0276610-mRNA-1 |
| chr2_3 | CDS | 8880995 | 8882035 | 8880995 | ID=Msa0276610-mRNA-1:cds;Parent=Msa0276610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
