AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0421390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421390 MtrunA17_Chr3g0121931 95.972 720 28 1 1 719 1 720 0.0 1438
Msa0421390 MtrunA17_Chr3g0121951 81.931 725 115 6 1 719 1 715 0.0 1209
Msa0421390 MtrunA17_Chr8g0377991 73.907 732 170 6 1 719 1 724 0.0 1100
Msa0421390 MtrunA17_Chr1g0205711 26.540 633 380 15 107 718 116 684 2.94e-53 196
Msa0421390 MtrunA17_Chr1g0194371 28.209 670 389 21 81 719 46 654 2.92e-52 192
Msa0421390 MtrunA17_Chr7g0270221 26.372 656 363 19 81 711 46 606 4.40e-48 180
Msa0421390 MtrunA17_Chr5g0396691 27.340 673 390 26 81 719 48 655 3.61e-47 177
Msa0421390 MtrunA17_Chr1g0162621 26.370 675 393 23 81 719 48 654 9.82e-47 176
Msa0421390 MtrunA17_Chr4g0034181 26.308 669 400 24 81 719 47 652 6.79e-46 174
Msa0421390 MtrunA17_Chr5g0396711 26.746 673 394 24 81 719 48 655 2.92e-45 172
Msa0421390 MtrunA17_Chr1g0160041 26.053 641 391 18 107 718 108 694 1.13e-42 165
Msa0421390 MtrunA17_Chr8g0388081 25.661 643 380 23 108 719 19 594 2.40e-42 162
Msa0421390 MtrunA17_Chr3g0120731 24.611 642 400 20 108 718 138 726 3.01e-39 155
Msa0421390 MtrunA17_Chr3g0124631 24.693 652 390 20 107 718 106 696 1.29e-35 144
Msa0421390 MtrunA17_Chr2g0334131 30.337 267 138 9 454 709 50 279 9.50e-20 90.1
Msa0421390 MtrunA17_Chr3g0116251 28.857 350 162 14 262 605 202 470 3.81e-19 91.7
Msa0421390 MtrunA17_Chr3g0116271 39.490 157 78 5 454 605 328 472 3.67e-18 88.6
Msa0421390 MtrunA17_Chr2g0327341 29.146 199 116 4 474 670 331 506 4.57e-18 88.2
Msa0421390 MtrunA17_Chr4g0028411 37.241 145 78 4 477 619 337 470 5.71e-18 87.8
Msa0421390 MtrunA17_Chr5g0409791 35.088 171 88 7 440 604 328 481 9.12e-17 84.3
Msa0421390 MtrunA17_Chr5g0395431 30.653 199 110 4 474 667 376 551 9.16e-17 84.3
Msa0421390 MtrunA17_Chr4g0039791 33.742 163 93 4 472 631 351 501 1.72e-16 83.2
Msa0421390 MtrunA17_Chr3g0102411 32.000 200 117 6 471 664 329 515 2.19e-16 83.2
Msa0421390 MtrunA17_Chr6g0471921 22.283 552 306 18 107 642 32 476 6.20e-16 81.3
Msa0421390 MtrunA17_Chr1g0157401 33.149 181 106 4 453 629 329 498 1.02e-15 80.9
Msa0421390 MtrunA17_Chr5g0409771 32.000 175 99 5 463 631 335 495 4.53e-15 79.0
Msa0421390 MtrunA17_Chr4g0072561 29.798 198 112 4 474 667 338 512 4.46e-14 75.5
Msa0421390 MtrunA17_Chr1g0180541 29.126 206 117 6 456 643 316 510 6.45e-14 75.1
Msa0421390 MtrunA17_Chr1g0186071 38.095 147 75 6 476 619 351 484 6.60e-14 75.1
Msa0421390 MtrunA17_Chr1g0180551 30.625 160 96 3 476 631 413 561 2.75e-13 73.2
Msa0421390 MtrunA17_Chr4g0000461 28.571 273 149 9 454 716 308 544 5.13e-13 72.4
Msa0421390 MtrunA17_Chr1g0197391 32.515 163 92 4 472 629 355 504 5.84e-13 72.0
Msa0421390 MtrunA17_Chr8g0353341 29.348 184 105 5 453 627 332 499 5.10e-11 65.9
Msa0421390 MtrunA17_Chr4g0004101 26.633 199 130 4 453 646 97 284 6.49e-11 64.3
Msa0421390 MtrunA17_Chr4g0004841 25.620 242 146 7 453 686 102 317 8.36e-11 64.3
Msa0421390 MtrunA17_Chr5g0433231 25.328 229 114 7 431 627 278 481 8.80e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421390 AT3G23790.1 68.082 683 210 5 41 719 44 722 0.0 991
Msa0421390 AT4G14070.1 65.260 711 227 6 12 718 32 726 0.0 969
Msa0421390 AT5G27600.1 28.571 637 366 16 105 718 117 687 8.61e-59 211
Msa0421390 AT1G49430.1 27.882 642 377 21 103 718 76 657 5.18e-55 200
Msa0421390 AT2G47240.1 26.387 667 404 20 81 719 46 653 5.43e-53 194
Msa0421390 AT2G47240.2 26.387 667 404 20 81 719 46 653 5.43e-53 194
Msa0421390 AT2G47240.3 26.387 667 404 20 81 719 46 653 5.43e-53 194
Msa0421390 AT2G47240.4 26.121 647 396 19 96 719 7 594 1.79e-51 189
Msa0421390 AT3G05970.1 27.070 628 385 16 107 719 119 688 2.56e-51 190
Msa0421390 AT4G23850.1 26.074 675 396 22 81 719 49 656 2.31e-48 181
Msa0421390 AT4G11030.1 25.811 678 410 23 73 719 41 656 7.53e-48 180
Msa0421390 AT1G64400.1 25.074 678 413 20 74 719 42 656 1.56e-47 179
Msa0421390 AT1G77590.1 26.365 641 386 20 107 718 107 690 5.52e-43 166
Msa0421390 AT2G04350.2 25.932 644 389 21 108 718 131 719 6.98e-42 163
Msa0421390 AT2G04350.1 25.932 644 389 21 108 718 131 719 6.98e-42 163
Msa0421390 AT1G49430.2 27.789 475 277 14 103 559 76 502 1.02e-39 154
Msa0421390 AT1G77590.2 25.862 580 344 20 168 718 22 544 3.62e-33 135
Msa0421390 AT3G21230.3 30.667 225 121 6 453 668 335 533 3.35e-19 92.4
Msa0421390 AT3G21230.1 36.646 161 79 5 453 604 335 481 5.49e-19 91.7
Msa0421390 AT4G05160.1 28.571 252 146 7 426 670 287 511 7.31e-19 91.3
Msa0421390 AT4G05160.1 25.667 300 192 13 82 373 33 309 3.30e-14 76.6
Msa0421390 AT3G21230.2 36.646 161 79 5 453 604 335 481 7.39e-19 90.9
Msa0421390 AT5G63380.1 29.299 314 133 13 262 563 205 441 3.56e-18 89.0
Msa0421390 AT3G21240.1 33.129 163 93 3 474 631 343 494 5.61e-18 88.6
Msa0421390 AT3G21240.2 33.553 152 85 3 474 620 343 483 2.69e-17 85.9
Msa0421390 AT3G21240.3 33.553 152 85 3 474 620 343 483 2.69e-17 85.9
Msa0421390 AT4G19010.1 30.102 196 117 6 463 650 342 525 4.18e-16 82.4
Msa0421390 AT1G65060.1 30.620 258 142 8 413 659 289 520 6.22e-16 82.0
Msa0421390 AT1G20480.1 33.918 171 98 5 453 619 334 493 7.68e-16 81.6
Msa0421390 AT1G21530.2 25.820 244 143 8 402 627 256 479 1.19e-14 77.8
Msa0421390 AT1G20510.1 30.978 184 102 5 453 627 313 480 2.07e-14 77.0
Msa0421390 AT1G20510.1 24.138 290 176 8 86 363 39 296 7.37e-13 72.4
Msa0421390 AT1G51680.3 27.723 202 118 4 474 670 350 528 2.89e-14 76.6
Msa0421390 AT1G20510.2 31.818 176 95 5 453 619 313 472 3.65e-14 76.3
Msa0421390 AT1G20510.2 24.138 290 176 8 86 363 39 296 8.87e-13 71.6
Msa0421390 AT1G21530.1 25.410 244 142 8 402 627 256 477 4.14e-14 76.3
Msa0421390 AT1G51680.2 42.222 90 47 1 474 558 350 439 8.77e-14 75.1
Msa0421390 AT1G51680.1 42.222 90 47 1 474 558 350 439 1.01e-13 75.1
Msa0421390 AT1G21540.1 25.410 244 144 8 402 627 259 482 1.16e-13 74.7
Msa0421390 AT1G66120.1 32.258 186 89 8 453 618 306 474 3.46e-13 73.2
Msa0421390 AT3G48990.1 25.591 254 148 11 460 710 294 509 4.79e-13 72.8
Msa0421390 AT1G20510.3 24.138 290 176 8 86 363 39 296 8.35e-13 71.6
Msa0421390 AT1G20510.3 32.653 147 75 4 453 590 313 444 1.35e-12 71.2
Msa0421390 AT1G65060.2 40.625 96 52 1 474 564 353 448 1.79e-12 70.9
Msa0421390 AT1G65890.1 29.101 189 94 7 453 620 306 475 3.96e-12 70.1
Msa0421390 AT5G16340.1 27.149 221 115 7 453 643 303 507 7.82e-12 68.9
Msa0421390 AT1G20500.1 32.075 159 83 6 455 604 321 463 1.25e-11 68.2
Msa0421390 AT5G16370.1 28.095 210 113 8 430 621 284 473 1.84e-11 67.8
Msa0421390 AT1G68270.1 30.097 206 112 8 453 639 276 468 2.92e-11 67.0
Msa0421390 AT1G65880.1 26.203 187 102 6 453 620 306 475 6.92e-11 65.9

Find 195 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGGAAGTCATAAATTT+TGG 0.171997 3_2:-70328129 Msa0421390:CDS
GCAATCTGATTATACATTTC+AGG 0.192501 3_2:+70328255 None:intergenic
TCATATGCTGGCAAATAAAT+TGG 0.192941 3_2:-70326874 Msa0421390:CDS
GGAAAGCAGTTCCTGATATT+TGG 0.194998 3_2:-70329513 Msa0421390:CDS
ATTGAGGTCTTCAAATAAAA+TGG 0.203541 3_2:+70328228 None:intergenic
ACGTTATAAGCCACATTTAA+TGG 0.209234 3_2:-70327428 Msa0421390:CDS
AGTAAAATCCGTTCAACTAT+TGG 0.228208 3_2:-70326846 Msa0421390:CDS
GCTGAGGGGTTGAGAGTTAT+TGG 0.238978 3_2:-70328699 Msa0421390:CDS
TAACAAAGAAGAAGTCTTAA+AGG 0.239879 3_2:-70324608 Msa0421390:CDS
CAGATTTATTATTCTGCTTT+GGG 0.256893 3_2:-70328205 Msa0421390:CDS
TTGCCAGAACTTTCTAATAA+AGG 0.265222 3_2:+70329559 None:intergenic
TATGTTTGAAACAATAAAAT+TGG 0.270337 3_2:-70327940 Msa0421390:CDS
GGAAGGTGATTTCTGATTCT+TGG 0.275282 3_2:+70326959 None:intergenic
CTATAATGACAGATTGATAA+TGG 0.276137 3_2:-70324122 Msa0421390:intron
GAATTCCCGCCATTGGAATT+TGG 0.276280 3_2:+70330040 None:intergenic
TGCCAGAACTTTCTAATAAA+GGG 0.276917 3_2:+70329560 None:intergenic
CTGACTAGCATCTGAACTAT+TGG 0.280323 3_2:+70324558 None:intergenic
TTTAAGACTTCTTCTTTGTT+AGG 0.291375 3_2:+70324610 None:intergenic
TTGAATTTGCAGAATGGATA+TGG 0.306555 3_2:-70326414 Msa0421390:CDS
TCAGATTTATTATTCTGCTT+TGG 0.310911 3_2:-70328206 Msa0421390:CDS
TTTCTAGATCAAACACTTAT+CGG 0.332809 3_2:-70327705 Msa0421390:intron
AAAGTTGTAGATTCTGAAAC+TGG 0.332814 3_2:-70325712 Msa0421390:CDS
ATTGCTGCCCACCATTCAAT+TGG 0.343850 3_2:-70325171 Msa0421390:CDS
TTGAATTCTGTATGCTTAAG+TGG 0.346471 3_2:+70325733 None:intergenic
GGCAGAAGAAGAAGAGATAA+TGG 0.347487 3_2:+70330061 None:intergenic
TAAAATACTATACAGGCTAT+TGG 0.351278 3_2:-70326438 Msa0421390:intron
TCCCCTTTATTAGAAAGTTC+TGG 0.351729 3_2:-70329562 Msa0421390:CDS
ACTTGTATAGATTCTCTATC+TGG 0.356723 3_2:+70324042 None:intergenic
ATTGGGCGGAGTCGTAATTC+TGG 0.364386 3_2:-70325153 Msa0421390:CDS
CCATTATCGTGCAGGACATC+AGG 0.365896 3_2:-70324271 Msa0421390:intron
TTCTAAGTATGTTGCCTCCT+TGG 0.366326 3_2:-70327652 Msa0421390:CDS
GCAGAAGTTCTCCAAATATC+AGG 0.367225 3_2:+70329502 None:intergenic
TGTAACATACCATTGACATT+AGG 0.368601 3_2:+70324012 None:intergenic
CTACAAATCGGGTCATTGAT+AGG 0.369287 3_2:-70325227 Msa0421390:CDS
CAGGGTTTCCATTTCAGATT+GGG 0.377327 3_2:-70324252 Msa0421390:CDS
TGACAACAATTTGTTGTATG+AGG 0.378602 3_2:+70324782 None:intergenic
TCCCTTCGAACTTTCATTGT+GGG 0.379570 3_2:+70324089 None:intergenic
TGGGTTAGCATAACACCTTT+AGG 0.379716 3_2:+70327873 None:intergenic
GTAAAATCCGTTCAACTATT+GGG 0.386193 3_2:-70326845 Msa0421390:CDS
TTGGAGCAATCAATGTGGTT+AGG 0.390648 3_2:-70328353 Msa0421390:CDS
AAGTTACCTCGGATTGAGTA+TGG 0.390791 3_2:+70329896 None:intergenic
TTGGCTATGGGCAAGAATTA+TGG 0.392307 3_2:-70326916 Msa0421390:CDS
GACACCATTGTGCTTTCATC+AGG 0.404554 3_2:-70325099 Msa0421390:intron
TCTATTGTGCCACTGGCATT+AGG 0.407334 3_2:+70323935 None:intergenic
TGGAGCAATCAATGTGGTTA+GGG 0.410509 3_2:-70328352 Msa0421390:CDS
AGCTCAAACACAGGATCAAA+TGG 0.411118 3_2:-70323980 Msa0421390:three_prime_UTR
TTGTAGTTAGCGGAGGTGAT+AGG 0.412051 3_2:+70330018 None:intergenic
AGTCTAGGCATGATGGCAAT+TGG 0.413657 3_2:-70328372 Msa0421390:intron
CAATAGTTCAGATGCTAGTC+AGG 0.414412 3_2:-70324557 Msa0421390:CDS
ATACAACAAATTGTTGTCAT+TGG 0.414526 3_2:-70324778 Msa0421390:CDS
AGAATCCTTCAGCTACAAAT+CGG 0.416763 3_2:-70325239 Msa0421390:CDS
GCAATACCGTGCGACTTTGT+CGG 0.418331 3_2:+70328106 None:intergenic
GTTATTGCTGCTCGGCGACT+TGG 0.423372 3_2:-70326372 Msa0421390:CDS
TAGTACCCCTTCATCAATTG+TGG 0.424278 3_2:+70325643 None:intergenic
ATTTGGACATATAGGATAAA+CGG 0.425855 3_2:-70324654 Msa0421390:intron
TTATTTGCCAGCATATGAAC+TGG 0.429494 3_2:+70326879 None:intergenic
AGAACTTCTGCAGAGAAGTA+TGG 0.431246 3_2:-70329490 Msa0421390:CDS
TTGTCGCTCTCACATTCATA+AGG 0.434874 3_2:-70327227 Msa0421390:CDS
AGAAGGTGAAAATGTTGAAC+CGG 0.438102 3_2:-70324836 Msa0421390:intron
ATAGAGTTATGGCTCAATAC+AGG 0.440234 3_2:-70324067 Msa0421390:CDS
AGGATTGGCCCAATCTGAAA+TGG 0.442047 3_2:+70324244 None:intergenic
TTCAACTATGACATACAAAC+AGG 0.442864 3_2:-70329428 Msa0421390:intron
CACTACCGTGAGAAACTTGA+AGG 0.445244 3_2:-70327570 Msa0421390:intron
AGGGATGGCTGGCTGAATAC+TGG 0.447110 3_2:-70325207 Msa0421390:CDS
ATCTCTATGCAATGTTGGAT+TGG 0.451464 3_2:-70326935 Msa0421390:CDS
TTCTGCCAAATTCCAATGGC+GGG 0.452045 3_2:-70330045 Msa0421390:exon
AGAGGTTGGAGAAACGTTGA+TGG 0.454093 3_2:+70329936 None:intergenic
TTGCTGATAACTCGTGTCGC+TGG 0.454374 3_2:-70328647 Msa0421390:CDS
GGTGGTGTGATTGTTGTTGA+AGG 0.456836 3_2:-70325132 Msa0421390:CDS
CCTTGTTTGCTTCACTGACA+AGG 0.457235 3_2:+70328169 None:intergenic
TATAATGACAGATTGATAAT+GGG 0.458531 3_2:-70324121 Msa0421390:intron
ATGCAATGTTGGATTGGCTA+TGG 0.459731 3_2:-70326929 Msa0421390:CDS
TTATAGGTAATTGGATCTGT+GGG 0.463586 3_2:-70325760 Msa0421390:intron
GTTCTTCCACCTGGTTCAAA+GGG 0.463824 3_2:-70325685 Msa0421390:CDS
TCAGGGTTTCCATTTCAGAT+TGG 0.464402 3_2:-70324253 Msa0421390:CDS
ACAAATTGTTGTCATTGGTC+AGG 0.465907 3_2:-70324773 Msa0421390:intron
TTGTATGAGGTTACTCCTCA+TGG 0.473965 3_2:+70324795 None:intergenic
GTATGGTGATAAAGTAGCTT+TGG 0.477399 3_2:-70329473 Msa0421390:CDS
TCTCGTAAATGATCCCTTCA+CGG 0.477946 3_2:-70324221 Msa0421390:intron
TCAATGTGGTTAGGGGTTCA+AGG 0.478558 3_2:-70328344 Msa0421390:CDS
CTTCTTCTGCCAAATTCCAA+TGG 0.481407 3_2:-70330049 Msa0421390:exon
TTGCTGCCCACCATTCAATT+GGG 0.483696 3_2:-70325170 Msa0421390:CDS
TTCAAAATTCCCTTTGAACC+AGG 0.484352 3_2:+70325676 None:intergenic
TGTTTGTATGTCATAGTTGA+AGG 0.485938 3_2:+70329430 None:intergenic
AGTCGCCGAGCAGCAATAAC+CGG 0.486356 3_2:+70326375 None:intergenic
GCAGCTTCTTCAAGCTCTCC+CGG 0.488586 3_2:+70324817 None:intergenic
ATCCAACATTGCATAGAGAT+AGG 0.490564 3_2:+70326938 None:intergenic
GGATCATTTACGAGAAGGAT+TGG 0.491261 3_2:+70324229 None:intergenic
ACTTCCATGAATGTATAGAT+TGG 0.492371 3_2:+70328141 None:intergenic
TACGACTCCGCCCAATTGAA+TGG 0.495276 3_2:+70325160 None:intergenic
GTGTACACAAGTGGTACTAC+TGG 0.495817 3_2:-70327900 Msa0421390:CDS
CGCTGGCTTGTAGCAGATCA+AGG 0.496198 3_2:-70328630 Msa0421390:intron
GTGATAGGAATTCCCGCCAT+TGG 0.496343 3_2:+70330033 None:intergenic
CAAAGAAAACGGAGATAAGA+AGG 0.496585 3_2:-70329588 Msa0421390:CDS
GAAGAGAGGAAGTGAATGGA+TGG 0.497533 3_2:+70329984 None:intergenic
TTTATAGGTAATTGGATCTG+TGG 0.497753 3_2:-70325761 Msa0421390:intron
TTCCTATCTCTATGCAATGT+TGG 0.497937 3_2:-70326940 Msa0421390:CDS
GGTGCCAATCTATACATTCA+TGG 0.499931 3_2:-70328145 Msa0421390:CDS
CGAAGAAGAGAGGAAGTGAA+TGG 0.502851 3_2:+70329980 None:intergenic
ATTGGTTTGAATTTGCAGAA+TGG 0.503914 3_2:-70326420 Msa0421390:CDS
AGTTCGAAGGGATAGAGTTA+TGG 0.505449 3_2:-70324078 Msa0421390:CDS
AAGGGTCAGCTTAGGATACA+TGG 0.508079 3_2:-70327208 Msa0421390:CDS
TAGTTCATCATATATTAGAC+TGG 0.513277 3_2:+70324525 None:intergenic
CCTTGTCAGTGAAGCAAACA+AGG 0.515645 3_2:-70328169 Msa0421390:CDS
AGTTCTTCCACCTGGTTCAA+AGG 0.516190 3_2:-70325686 Msa0421390:CDS
TAGGTGGCATACTGGCATCA+TGG 0.516640 3_2:+70328076 None:intergenic
CAGAATAATAAATCTGATTG+AGG 0.517753 3_2:+70328212 None:intergenic
CAGGGGCCCACAATTGATGA+AGG 0.520046 3_2:-70325650 Msa0421390:CDS
GAATCCTTCAGCTACAAATC+GGG 0.521388 3_2:-70325238 Msa0421390:CDS
GACGTTGTACCTACTGAAGC+TGG 0.521458 3_2:-70327683 Msa0421390:CDS
ATTATATCCAGTTCATATGC+TGG 0.525970 3_2:-70326886 Msa0421390:CDS
ATCCCTTCGAACTTTCATTG+TGG 0.526009 3_2:+70324088 None:intergenic
ACATTCATAAGGGTCAGCTT+AGG 0.528734 3_2:-70327216 Msa0421390:CDS
GTAAACCAACCTAATGTCAA+TGG 0.530199 3_2:-70324021 Msa0421390:exon
AGTACCCCTTCATCAATTGT+GGG 0.533326 3_2:+70325644 None:intergenic
AGGTGGCATACTGGCATCAT+GGG 0.534470 3_2:+70328077 None:intergenic
TGTCGCTCTCACATTCATAA+GGG 0.538387 3_2:-70327226 Msa0421390:CDS
AAGAAGAAGAGATAATGGAA+TGG 0.539434 3_2:+70330066 None:intergenic
CCTGATGCAAAAGATTCTGA+TGG 0.540187 3_2:+70327853 None:intergenic
GTACGAGTCTATTGTGCCAC+TGG 0.540427 3_2:+70323928 None:intergenic
TGGAGAAACGTTGATGGTGG+TGG 0.540926 3_2:+70329942 None:intergenic
TACAAATCGGGTCATTGATA+GGG 0.544363 3_2:-70325226 Msa0421390:CDS
GTTGATGGTGGTGGTGAAGT+TGG 0.545443 3_2:+70329951 None:intergenic
ATGACCCGATTTGTAGCTGA+AGG 0.547200 3_2:+70325234 None:intergenic
ATGCTTAATCTAACCGTGAA+GGG 0.548255 3_2:+70324208 None:intergenic
GAAGAGATAATGGAATGGAA+TGG 0.554593 3_2:+70330071 None:intergenic
ATATAGGATAAACGGCGTCT+AGG 0.555187 3_2:-70324646 Msa0421390:intron
CATTATCGTGCAGGACATCA+GGG 0.555530 3_2:-70324270 Msa0421390:intron
TTATTAGAAAGTTCTGGCAA+TGG 0.556242 3_2:-70329556 Msa0421390:CDS
TGAATACTGGTGACATAGGT+TGG 0.556669 3_2:-70325194 Msa0421390:CDS
TGGTTTAACAGAAACTTCAC+CGG 0.558821 3_2:-70326394 Msa0421390:CDS
GGTACTACTGGAAATCCTAA+AGG 0.559374 3_2:-70327888 Msa0421390:CDS
ATATATGCAGACAAAGAAAA+CGG 0.560706 3_2:-70329599 Msa0421390:intron
GCCAGAACTTTCTAATAAAG+GGG 0.561061 3_2:+70329561 None:intergenic
AACATTGCATAGAGATAGGA+AGG 0.562084 3_2:+70326942 None:intergenic
AAGACGCGAAAAGAAGAGGT+TGG 0.567924 3_2:+70329922 None:intergenic
GGGTCATTGATAGGGATGGC+TGG 0.568019 3_2:-70325218 Msa0421390:CDS
GGAGTGTAAGCGCATTTATG+AGG 0.572127 3_2:-70327187 Msa0421390:intron
TGCAATGTTGGATTGGCTAT+GGG 0.572738 3_2:-70326928 Msa0421390:CDS
ACATACCATTGACATTAGGT+TGG 0.573803 3_2:+70324016 None:intergenic
AATCTATCTCCAGCTTCAGT+AGG 0.579782 3_2:+70327674 None:intergenic
ACTCTGCAGGCTGCAATAAG+TGG 0.583496 3_2:-70326572 Msa0421390:intron
ACTGGTGAAGTTCTTCCACC+TGG 0.584400 3_2:-70325694 Msa0421390:CDS
GATGCTTAATCTAACCGTGA+AGG 0.585252 3_2:+70324207 None:intergenic
TTAGAAAGTTCTGGCAATGG+TGG 0.587337 3_2:-70329553 Msa0421390:CDS
GCAAAAGACGCGAAAAGAAG+AGG 0.590166 3_2:+70329918 None:intergenic
CTGATGCAAAAGATTCTGAT+GGG 0.591884 3_2:+70327854 None:intergenic
CTTCTGCCAAATTCCAATGG+CGG 0.594914 3_2:-70330046 Msa0421390:exon
AAAATTCCCTTTGAACCAGG+TGG 0.596173 3_2:+70325679 None:intergenic
TGAAGGGATCATTTACGAGA+AGG 0.596427 3_2:+70324224 None:intergenic
CAGGCTGCAATAAGTGGTGG+TGG 0.597313 3_2:-70326566 Msa0421390:CDS
TAATACCTTCAAGTTTCTCA+CGG 0.598984 3_2:+70327565 None:intergenic
ACTCCGCCCAATTGAATGGT+GGG 0.599124 3_2:+70325164 None:intergenic
TAGAGTTATGGCTCAATACA+GGG 0.601359 3_2:-70324066 Msa0421390:CDS
CACCCACAATGAAAGTTCGA+AGG 0.602481 3_2:-70324091 Msa0421390:CDS
TTGATATCCCAATAGTTGAA+CGG 0.602896 3_2:+70326838 None:intergenic
AGAAGCATAGTTGTAGTTAG+CGG 0.603228 3_2:+70330008 None:intergenic
AATAGTTATAGCTCAAACAC+AGG 0.603943 3_2:-70323989 Msa0421390:three_prime_UTR
ATTGATGAAGGGGTACTACA+AGG 0.604460 3_2:-70325638 Msa0421390:intron
AGGGGCCCACAATTGATGAA+GGG 0.605207 3_2:-70325649 Msa0421390:CDS
TGGCTGAATACTGGTGACAT+AGG 0.606118 3_2:-70325198 Msa0421390:CDS
GTGGTGTGGCTTTAGATGAG+TGG 0.607797 3_2:-70329534 Msa0421390:CDS
TTGGTGCGAGCGAAGAAGAG+AGG 0.609535 3_2:+70329970 None:intergenic
AGCATAGTTGTAGTTAGCGG+AGG 0.612067 3_2:+70330011 None:intergenic
CTGCCCACCATTCAATTGGG+CGG 0.614238 3_2:-70325167 Msa0421390:CDS
GGAACAGAAACCATTAAATG+TGG 0.615318 3_2:+70327418 None:intergenic
AATCGGGTCATTGATAGGGA+TGG 0.615967 3_2:-70325222 Msa0421390:CDS
GACTCCGCCCAATTGAATGG+TGG 0.617039 3_2:+70325163 None:intergenic
GGGGCCCACAATTGATGAAG+GGG 0.617435 3_2:-70325648 Msa0421390:CDS
GCTACTCTCGTGTACACAAG+TGG 0.618187 3_2:-70327909 Msa0421390:CDS
GCTCTTTCATATGCATGCCA+AGG 0.618770 3_2:+70327635 None:intergenic
TGTGTTTAGTCTAGGCATGA+TGG 0.622133 3_2:-70328379 Msa0421390:intron
AGATTTATTATTCTGCTTTG+GGG 0.624021 3_2:-70328204 Msa0421390:CDS
GGGCGGAGTCGTAATTCTGG+TGG 0.625225 3_2:-70325150 Msa0421390:CDS
CTTCACCGGTTATTGCTGCT+CGG 0.626548 3_2:-70326380 Msa0421390:CDS
ACCCACAATGAAAGTTCGAA+GGG 0.626647 3_2:-70324090 Msa0421390:CDS
TGAAAGTGTTGCACTAGCTG+TGG 0.630262 3_2:-70328283 Msa0421390:CDS
GGAGCAATCAATGTGGTTAG+GGG 0.632299 3_2:-70328351 Msa0421390:CDS
GGTTGGAGAAACGTTGATGG+TGG 0.632847 3_2:+70329939 None:intergenic
CTTTCATATGCATGCCAAGG+AGG 0.633043 3_2:+70327638 None:intergenic
TTCAACTATTGGGATATCAA+CGG 0.641456 3_2:-70326835 Msa0421390:intron
GAAGGTGAAAATGTTGAACC+GGG 0.643368 3_2:-70324835 Msa0421390:intron
AAGTTCTGGCAATGGTGGTG+TGG 0.643981 3_2:-70329548 Msa0421390:CDS
TGGCATACTGGCATCATGGG+AGG 0.648951 3_2:+70328080 None:intergenic
TTGTATGTCATAGTTGAAGG+AGG 0.649181 3_2:+70329433 None:intergenic
TATAGGTAATTGGATCTGTG+GGG 0.649339 3_2:-70325759 Msa0421390:intron
GCACAATGGTGTCTTTAGCA+CGG 0.650126 3_2:+70325109 None:intergenic
CTGCAGGCTGCAATAAGTGG+TGG 0.674796 3_2:-70326569 Msa0421390:intron
AGCTTGAAGAAGCTGCCATG+AGG 0.677140 3_2:-70324810 Msa0421390:CDS
TATATGATGAACTAAAGACC+TGG 0.691242 3_2:-70324516 Msa0421390:intron
GTAAAATTACCTAATGCCAG+TGG 0.694275 3_2:-70323944 Msa0421390:three_prime_UTR
CTAGTGCAACACTTTCAGAG+TGG 0.725222 3_2:+70328289 None:intergenic
TGTCAGTGAAGCAAACAAGG+AGG 0.753996 3_2:-70328166 Msa0421390:CDS
GGCAATTGGAGCAATCAATG+TGG 0.764361 3_2:-70328358 Msa0421390:CDS
TCTACCTGATGAAAGCACAA+TGG 0.784956 3_2:+70325095 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATAACTAATTTTC+AGG - chr3_2:70324587-70324606 Msa0421390:CDS 10.0%
!! AACTATTAATCTATATTATA+GGG + chr3_2:70324633-70324652 None:intergenic 10.0%
!! AAACTATTAATCTATATTAT+AGG + chr3_2:70324634-70324653 None:intergenic 10.0%
!!! ATTTTTTTAAAATACTATAC+AGG - chr3_2:70327379-70327398 Msa0421390:intron 10.0%
!! AAAAGAAAAATTTATTAAGT+AGG + chr3_2:70327860-70327879 None:intergenic 10.0%
!! TAATGTAAATAATATAAAGA+TGG + chr3_2:70329653-70329672 None:intergenic 10.0%
!! GATATGTAATAATTATGTAT+TGG - chr3_2:70324135-70324154 Msa0421390:intron 15.0%
!! TATATACAAAACTTTATGAT+TGG + chr3_2:70324210-70324229 None:intergenic 15.0%
!!! ATCACTAATTTTATTGTTAT+TGG - chr3_2:70324459-70324478 Msa0421390:intron 15.0%
!!! TCACTAATTTTATTGTTATT+GGG - chr3_2:70324460-70324479 Msa0421390:intron 15.0%
!!! AACATGTTTTATTTTAGAAT+TGG + chr3_2:70325328-70325347 None:intergenic 15.0%
!!! ATTCTAAAATAAAACATGTT+TGG - chr3_2:70325328-70325347 Msa0421390:intron 15.0%
!!! TATGTTTGAAACAATAAAAT+TGG - chr3_2:70325884-70325903 Msa0421390:intron 15.0%
!!! TTATGAAAAAGTATCTTTTT+AGG + chr3_2:70326747-70326766 None:intergenic 15.0%
!! TGTACAAAATTTATTATCAT+TGG + chr3_2:70326820-70326839 None:intergenic 15.0%
!!! ATTTTTAATCTAATTGTACT+TGG + chr3_2:70327519-70327538 None:intergenic 15.0%
!!! AATATTTTGCAATTAACTTA+CGG - chr3_2:70328821-70328840 Msa0421390:intron 15.0%
!!! TCAGAATTAAATTGATTTTA+AGG - chr3_2:70330110-70330129 Msa0421390:five_prime_UTR 15.0%
!! TATACAAGACAATTGTAAAA+TGG + chr3_2:70324008-70324027 None:intergenic 20.0%
!!! ATTTGTTGTTATTGTCATAT+TGG - chr3_2:70324164-70324183 Msa0421390:intron 20.0%
!!! AATTTTATTGTTATTGGGTA+TGG - chr3_2:70324465-70324484 Msa0421390:intron 20.0%
!!! GGTTTCTTTTGTTTTATTTT+AGG - chr3_2:70324693-70324712 Msa0421390:intron 20.0%
!!! TTGTTTTATTTTAGGAGATA+TGG - chr3_2:70324701-70324720 Msa0421390:intron 20.0%
!! TCAATAATCAAAGTTTCAAA+AGG + chr3_2:70324854-70324873 None:intergenic 20.0%
!! AACTTTGATTATTGAATGTA+TGG - chr3_2:70324859-70324878 Msa0421390:intron 20.0%
!! TAATAAGTTAACATCAACAT+TGG + chr3_2:70325249-70325268 None:intergenic 20.0%
!! TAAAACATGTTTGGTTAAAT+TGG - chr3_2:70325337-70325356 Msa0421390:intron 20.0%
!!! ATTAATTTTTAAAGCATGCA+AGG - chr3_2:70325366-70325385 Msa0421390:intron 20.0%
!! ATGGATATATATTATAGAGA+AGG + chr3_2:70325776-70325795 None:intergenic 20.0%
!!! ATCTGTCATAAACTATTTTA+AGG - chr3_2:70326005-70326024 Msa0421390:intron 20.0%
!! TACAAAGTTTCAAAAACTAA+AGG + chr3_2:70326430-70326449 None:intergenic 20.0%
!!! GTAACATTTGTTTTTGTTTT+TGG - chr3_2:70326519-70326538 Msa0421390:intron 20.0%
!!! ATTTTGTACAATATGTTGAT+AGG - chr3_2:70326830-70326849 Msa0421390:intron 20.0%
!!! TTTTGTACAATATGTTGATA+GGG - chr3_2:70326831-70326850 Msa0421390:intron 20.0%
!! AATAACAAATAATGACACTA+TGG + chr3_2:70327187-70327206 None:intergenic 20.0%
!!! TAGTGTCATTATTTGTTATT+TGG - chr3_2:70327187-70327206 Msa0421390:intron 20.0%
!!! CTTTGAATTCTATCTTTTAT+AGG - chr3_2:70328048-70328067 Msa0421390:intron 20.0%
!!! TTCTATCTTTTATAGGTAAT+TGG - chr3_2:70328055-70328074 Msa0421390:intron 20.0%
!! ACATGATTATTACTTTCATA+AGG + chr3_2:70328957-70328976 None:intergenic 20.0%
!!! CTTTAAAATTTTATGGTTCA+AGG - chr3_2:70329093-70329112 Msa0421390:intron 20.0%
!! ATACAGTTTATATTATACGT+AGG + chr3_2:70329119-70329138 None:intergenic 20.0%
!! ACTCTCAATAATTTAATTAG+AGG + chr3_2:70329462-70329481 None:intergenic 20.0%
!!! TATAATGACAGATTGATAAT+GGG - chr3_2:70329703-70329722 Msa0421390:intron 20.0%
!!! TTAGGTAATTTTACTTGTAT+AGG + chr3_2:70329874-70329893 None:intergenic 20.0%
!! TATTACTAATCTAACTATTG+TGG + chr3_2:70329946-70329965 None:intergenic 20.0%
! ATATATGCAGACAAAGAAAA+CGG - chr3_2:70324225-70324244 Msa0421390:CDS 25.0%
!!! AACAGGTTTTTTTTCTTACT+AGG - chr3_2:70324413-70324432 Msa0421390:intron 25.0%
! AATTCTTTACACAGAAAGAA+GGG - chr3_2:70324518-70324537 Msa0421390:CDS 25.0%
!!! ACTAATTTTCAGGTTTACTT+AGG - chr3_2:70324597-70324616 Msa0421390:CDS 25.0%
! TTTAATCAATGATCTTTGTG+TGG - chr3_2:70324672-70324691 Msa0421390:intron 25.0%
! TTGTCTGAAGATTTATTGAT+AGG - chr3_2:70324923-70324942 Msa0421390:intron 25.0%
! TGTCTGAAGATTTATTGATA+GGG - chr3_2:70324924-70324943 Msa0421390:intron 25.0%
! TGATGTTAACTTATTACCTA+AGG - chr3_2:70325253-70325272 Msa0421390:intron 25.0%
! ATTGAGGTCTTCAAATAAAA+TGG + chr3_2:70325599-70325618 None:intergenic 25.0%
! CAGAATAATAAATCTGATTG+AGG + chr3_2:70325615-70325634 None:intergenic 25.0%
! TCAGATTTATTATTCTGCTT+TGG - chr3_2:70325618-70325637 Msa0421390:intron 25.0%
! CAGATTTATTATTCTGCTTT+GGG - chr3_2:70325619-70325638 Msa0421390:intron 25.0%
! AGATTTATTATTCTGCTTTG+GGG - chr3_2:70325620-70325639 Msa0421390:intron 25.0%
!! TTCATGGAAGTCATAAATTT+TGG - chr3_2:70325695-70325714 Msa0421390:CDS 25.0%
!! ATATATTATAGAGAAGGTGT+AGG + chr3_2:70325770-70325789 None:intergenic 25.0%
! AGATTAAGTGAAAGACTAAT+AGG + chr3_2:70325800-70325819 None:intergenic 25.0%
! TCTTTCACTTAATCTTCAAA+AGG - chr3_2:70325805-70325824 Msa0421390:intron 25.0%
! GAAATTCATTAACACGTAAT+CGG + chr3_2:70326103-70326122 None:intergenic 25.0%
! TTTCTAGATCAAACACTTAT+CGG - chr3_2:70326119-70326138 Msa0421390:intron 25.0%
!!! CATGTACTTTATTTTGTTCT+AGG - chr3_2:70326363-70326382 Msa0421390:intron 25.0%
!!! TATTTTGTTCTAGGATGATT+TGG - chr3_2:70326372-70326391 Msa0421390:CDS 25.0%
!!! ATTTTGTTCTAGGATGATTT+GGG - chr3_2:70326373-70326392 Msa0421390:CDS 25.0%
!!! TAGTTTTTGAAACTTTGTAC+AGG - chr3_2:70326431-70326450 Msa0421390:intron 25.0%
!! TTCATACAATTTCTGAGAAA+AGG + chr3_2:70326462-70326481 None:intergenic 25.0%
!!! AATTTGTTTTGTTCAGCTTT+TGG + chr3_2:70326712-70326731 None:intergenic 25.0%
!!! CATTTTTGTTATTCTCAAAC+AGG - chr3_2:70327328-70327347 Msa0421390:intron 25.0%
! TAAAATACTATACAGGCTAT+TGG - chr3_2:70327386-70327405 Msa0421390:intron 25.0%
! AGAGATATCATGATATAAAC+CGG - chr3_2:70327708-70327727 Msa0421390:intron 25.0%
!! TTTATCACATGGTAGATTTT+AGG + chr3_2:70327754-70327773 None:intergenic 25.0%
!! TTCTCTACATTTTTATCACA+TGG + chr3_2:70327765-70327784 None:intergenic 25.0%
! TGTAGAGAATAACAATTACT+AGG - chr3_2:70327776-70327795 Msa0421390:intron 25.0%
!!! GTTTTGTTAAGAAATCAGAA+GGG - chr3_2:70327798-70327817 Msa0421390:intron 25.0%
!! AATGATGGTTCTACTTAATT+AGG - chr3_2:70327824-70327843 Msa0421390:intron 25.0%
! AACATATGATGTAGAATAGA+TGG + chr3_2:70327893-70327912 None:intergenic 25.0%
! AAAAATCGTAACAATTTCGT+TGG - chr3_2:70328276-70328295 Msa0421390:CDS 25.0%
!! TCAAGTATTTATAAGGTATC+TGG + chr3_2:70328359-70328378 None:intergenic 25.0%
!!! AAGAGTTACTTTCCATTTTT+CGG - chr3_2:70328879-70328898 Msa0421390:intron 25.0%
! ATACAACAAATTGTTGTCAT+TGG - chr3_2:70329046-70329065 Msa0421390:intron 25.0%
!!! TTGACGGCTTTAAAATTTTA+TGG - chr3_2:70329086-70329105 Msa0421390:intron 25.0%
! ATGCAATGATTTCACTTATT+TGG - chr3_2:70329153-70329172 Msa0421390:intron 25.0%
! TTTCACTTATTTGGACATAT+AGG - chr3_2:70329162-70329181 Msa0421390:intron 25.0%
! ATTTGGACATATAGGATAAA+CGG - chr3_2:70329170-70329189 Msa0421390:intron 25.0%
!! TTTAAGACTTCTTCTTTGTT+AGG + chr3_2:70329217-70329236 None:intergenic 25.0%
! TAACAAAGAAGAAGTCTTAA+AGG - chr3_2:70329216-70329235 Msa0421390:intron 25.0%
! TAGTTCATCATATATTAGAC+TGG + chr3_2:70329302-70329321 None:intergenic 25.0%
! CTATAATGACAGATTGATAA+TGG - chr3_2:70329702-70329721 Msa0421390:intron 25.0%
! TAATCTAACTATTGTGGTAA+TGG + chr3_2:70329940-70329959 None:intergenic 25.0%
! AAAACAATACAACAAGTTAG+AGG + chr3_2:70330001-70330020 None:intergenic 25.0%
!! AAGAAGAAGAGATAATGGAA+TGG + chr3_2:70323761-70323780 None:intergenic 30.0%
CAACTTCTATAAAGTTACCT+CGG + chr3_2:70323942-70323961 None:intergenic 30.0%
AGGTAACTTTATAGAAGTTG+TGG - chr3_2:70323942-70323961 Msa0421390:three_prime_UTR 30.0%
AACTTTATAGAAGTTGTGGA+AGG - chr3_2:70323946-70323965 Msa0421390:three_prime_UTR 30.0%
ACTTTATAGAAGTTGTGGAA+GGG - chr3_2:70323947-70323966 Msa0421390:three_prime_UTR 30.0%
TGCCAGAACTTTCTAATAAA+GGG + chr3_2:70324267-70324286 None:intergenic 30.0%
TTGCCAGAACTTTCTAATAA+AGG + chr3_2:70324268-70324287 None:intergenic 30.0%
! TTATTAGAAAGTTCTGGCAA+TGG - chr3_2:70324268-70324287 Msa0421390:intron 30.0%
TGTTTGTATGTCATAGTTGA+AGG + chr3_2:70324397-70324416 None:intergenic 30.0%
TTCAACTATGACATACAAAC+AGG - chr3_2:70324396-70324415 Msa0421390:intron 30.0%
GAATTCTTTACACAGAAAGA+AGG - chr3_2:70324517-70324536 Msa0421390:CDS 30.0%
ATTCTTTACACAGAAAGAAG+GGG - chr3_2:70324519-70324538 Msa0421390:CDS 30.0%
!!! TAGTTTTGAAGAATAAGCAC+CGG - chr3_2:70324648-70324667 Msa0421390:intron 30.0%
! CAAAGATCATTGATTAAAGC+CGG + chr3_2:70324670-70324689 None:intergenic 30.0%
!! GAGATATGGTTGAGTTTTAT+TGG - chr3_2:70324715-70324734 Msa0421390:intron 30.0%
!!! ATATGGTTGAGTTTTATTGG+TGG - chr3_2:70324718-70324737 Msa0421390:intron 30.0%
ATTCTTAAACCATTGTCTTG+TGG - chr3_2:70324816-70324835 Msa0421390:CDS 30.0%
ACATATATTCCACAAGACAA+TGG + chr3_2:70324828-70324847 None:intergenic 30.0%
ATTGTCTTGTGGAATATATG+TGG - chr3_2:70324827-70324846 Msa0421390:CDS 30.0%
TTATCCCTTGAAATCTCATT+CGG - chr3_2:70325034-70325053 Msa0421390:intron 30.0%
TTTCTTACCAACATTTCAGT+TGG - chr3_2:70325082-70325101 Msa0421390:intron 30.0%
! TGCAATTTTAAACTTTGCTG+AGG - chr3_2:70325109-70325128 Msa0421390:CDS 30.0%
! GCAATTTTAAACTTTGCTGA+GGG - chr3_2:70325110-70325129 Msa0421390:CDS 30.0%
! CAATTTTAAACTTTGCTGAG+GGG - chr3_2:70325111-70325130 Msa0421390:CDS 30.0%
! AAAAGAGCAATTTTCTCATC+TGG + chr3_2:70325158-70325177 None:intergenic 30.0%
GCAATCTGATTATACATTTC+AGG + chr3_2:70325572-70325591 None:intergenic 30.0%
ACTTCCATGAATGTATAGAT+TGG + chr3_2:70325686-70325705 None:intergenic 30.0%
AAGTGAAAGACTAATAGGTA+TGG + chr3_2:70325795-70325814 None:intergenic 30.0%
TCTTACAAGGCTATAATTCT+TGG - chr3_2:70326063-70326082 Msa0421390:intron 30.0%
!! AATTCTTGGCTTTTCACATA+CGG - chr3_2:70326077-70326096 Msa0421390:intron 30.0%
!!! GAGTATTTTATTTTCTCACG+TGG - chr3_2:70326216-70326235 Msa0421390:intron 30.0%
! TAATACCTTCAAGTTTCTCA+CGG + chr3_2:70326262-70326281 None:intergenic 30.0%
TATGTTTCAACTTTCATGCA+TGG - chr3_2:70326294-70326313 Msa0421390:intron 30.0%
ATGTCATGAAAGAACACTTA+TGG - chr3_2:70326323-70326342 Msa0421390:intron 30.0%
ACGTTATAAGCCACATTTAA+TGG - chr3_2:70326396-70326415 Msa0421390:CDS 30.0%
CAAATGTTACTATTCACTAG+TGG + chr3_2:70326509-70326528 None:intergenic 30.0%
ATTATATCCAGTTCATATGC+TGG - chr3_2:70326938-70326957 Msa0421390:CDS 30.0%
TCATATGCTGGCAAATAAAT+TGG - chr3_2:70326950-70326969 Msa0421390:CDS 30.0%
AGTAAAATCCGTTCAACTAT+TGG - chr3_2:70326978-70326997 Msa0421390:intron 30.0%
GTAAAATCCGTTCAACTATT+GGG - chr3_2:70326979-70326998 Msa0421390:intron 30.0%
TTGATATCCCAATAGTTGAA+CGG + chr3_2:70326989-70327008 None:intergenic 30.0%
TTCAACTATTGGGATATCAA+CGG - chr3_2:70326989-70327008 Msa0421390:intron 30.0%
AAAAACTTGTCAACATGAGA+AGG + chr3_2:70327291-70327310 None:intergenic 30.0%
!!! TCATGTTGACAAGTTTTTTG+AGG - chr3_2:70327293-70327312 Msa0421390:intron 30.0%
!! ATTGGTTTGAATTTGCAGAA+TGG - chr3_2:70327404-70327423 Msa0421390:CDS 30.0%
TTGAATTTGCAGAATGGATA+TGG - chr3_2:70327410-70327429 Msa0421390:CDS 30.0%
GGTAGAATATTTAAGTAACC+TGG - chr3_2:70327618-70327637 Msa0421390:CDS 30.0%
TTAACTCAACATCACATAAC+CGG + chr3_2:70327730-70327749 None:intergenic 30.0%
!!! GGTTTTGTTAAGAAATCAGA+AGG - chr3_2:70327797-70327816 Msa0421390:intron 30.0%
TTTATAGGTAATTGGATCTG+TGG - chr3_2:70328063-70328082 Msa0421390:intron 30.0%
TTATAGGTAATTGGATCTGT+GGG - chr3_2:70328064-70328083 Msa0421390:intron 30.0%
TTGAATTCTGTATGCTTAAG+TGG + chr3_2:70328094-70328113 None:intergenic 30.0%
!! AAAGTTGTAGATTCTGAAAC+TGG - chr3_2:70328112-70328131 Msa0421390:CDS 30.0%
!! AAAGGGAATTTTGAAAGTCA+GGG - chr3_2:70328156-70328175 Msa0421390:CDS 30.0%
!!! CGATTTTTTCATATACACAC+TGG + chr3_2:70328264-70328283 None:intergenic 30.0%
CCAGTCTTCAAGTATTTATA+AGG + chr3_2:70328366-70328385 None:intergenic 30.0%
CCTTATAAATACTTGAAGAC+TGG - chr3_2:70328363-70328382 Msa0421390:CDS 30.0%
CTGGAACAAGGAATTATAAA+AGG - chr3_2:70328382-70328401 Msa0421390:intron 30.0%
TGTAACTTACACTCTTTGAT+CGG + chr3_2:70328547-70328566 None:intergenic 30.0%
AACAACATAGTTCCGAAAAA+TGG + chr3_2:70328894-70328913 None:intergenic 30.0%
!! TGACAACAATTTGTTGTATG+AGG + chr3_2:70329045-70329064 None:intergenic 30.0%
TATATGATGAACTAAAGACC+TGG - chr3_2:70329308-70329327 Msa0421390:intron 30.0%
TGAGAGTGAAACTAAATACA+AGG - chr3_2:70329475-70329494 Msa0421390:CDS 30.0%
TGAAACTAAATACAAGGCTA+GGG - chr3_2:70329481-70329500 Msa0421390:CDS 30.0%
CATTACAGAATTGACGTATT+TGG - chr3_2:70329668-70329687 Msa0421390:intron 30.0%
ACTTGTATAGATTCTCTATC+TGG + chr3_2:70329785-70329804 None:intergenic 30.0%
TGTAACATACCATTGACATT+AGG + chr3_2:70329815-70329834 None:intergenic 30.0%
AATAGTTATAGCTCAAACAC+AGG - chr3_2:70329835-70329854 Msa0421390:intron 30.0%
!! GAAGAGATAATGGAATGGAA+TGG + chr3_2:70323756-70323775 None:intergenic 35.0%
! AGAAGCATAGTTGTAGTTAG+CGG + chr3_2:70323819-70323838 None:intergenic 35.0%
! ATACGCGTTATGTGTTTTTC+AGG - chr3_2:70324113-70324132 Msa0421390:CDS 35.0%
CAAAGAAAACGGAGATAAGA+AGG - chr3_2:70324236-70324255 Msa0421390:CDS 35.0%
TCCCCTTTATTAGAAAGTTC+TGG - chr3_2:70324262-70324281 Msa0421390:intron 35.0%
GCCAGAACTTTCTAATAAAG+GGG + chr3_2:70324266-70324285 None:intergenic 35.0%
GTATGGTGATAAAGTAGCTT+TGG - chr3_2:70324351-70324370 Msa0421390:intron 35.0%
TTGTATGTCATAGTTGAAGG+AGG + chr3_2:70324394-70324413 None:intergenic 35.0%
!! TTCTTACTAGGTTGATAGCA+TGG - chr3_2:70324425-70324444 Msa0421390:intron 35.0%
!! TAGGTTGATAGCATGGAAAA+CGG - chr3_2:70324432-70324451 Msa0421390:intron 35.0%
! AGAGTTTGGTTCAAAGTAGA+TGG - chr3_2:70324495-70324514 Msa0421390:intron 35.0%
ACAACCGAATGAGATTTCAA+GGG + chr3_2:70325041-70325060 None:intergenic 35.0%
TACAACCGAATGAGATTTCA+AGG + chr3_2:70325042-70325061 None:intergenic 35.0%
TTATTACCTAAGGTCCAGTT+TGG - chr3_2:70325263-70325282 Msa0421390:intron 35.0%
TATTACCTAAGGTCCAGTTT+GGG - chr3_2:70325264-70325283 Msa0421390:intron 35.0%
! TATTATAGAGAAGGTGTAGG+TGG + chr3_2:70325767-70325786 None:intergenic 35.0%
CTTCAAAAGGAACAGTAATC+AGG - chr3_2:70325818-70325837 Msa0421390:intron 35.0%
CTGATGCAAAAGATTCTGAT+GGG + chr3_2:70325973-70325992 None:intergenic 35.0%
GAGTTCATAGAACTCTTACA+AGG - chr3_2:70326050-70326069 Msa0421390:intron 35.0%
GGAACAGAAACCATTAAATG+TGG + chr3_2:70326409-70326428 None:intergenic 35.0%
AACATTGCATAGAGATAGGA+AGG + chr3_2:70326885-70326904 None:intergenic 35.0%
TTCCTATCTCTATGCAATGT+TGG - chr3_2:70326884-70326903 Msa0421390:CDS 35.0%
ATCCAACATTGCATAGAGAT+AGG + chr3_2:70326889-70326908 None:intergenic 35.0%
ATCTCTATGCAATGTTGGAT+TGG - chr3_2:70326889-70326908 Msa0421390:CDS 35.0%
TTATTTGCCAGCATATGAAC+TGG + chr3_2:70326948-70326967 None:intergenic 35.0%
! TCAAACAGGAACCTTCTTTT+CGG - chr3_2:70327342-70327361 Msa0421390:intron 35.0%
TTAGAAGATAGCCGAAAAGA+AGG + chr3_2:70327356-70327375 None:intergenic 35.0%
TGGTTTAACAGAAACTTCAC+CGG - chr3_2:70327430-70327449 Msa0421390:CDS 35.0%
TGATAGAGACTTGGGTATTA+TGG - chr3_2:70327557-70327576 Msa0421390:intron 35.0%
GATAGAGACTTGGGTATTAT+GGG - chr3_2:70327558-70327577 Msa0421390:intron 35.0%
ATAGAGACTTGGGTATTATG+GGG - chr3_2:70327559-70327578 Msa0421390:intron 35.0%
AAGTCCAAAATGGTGTAGTA+TGG - chr3_2:70327588-70327607 Msa0421390:CDS 35.0%
AGTCCAAAATGGTGTAGTAT+GGG - chr3_2:70327589-70327608 Msa0421390:CDS 35.0%
! TATCCCATACTACACCATTT+TGG + chr3_2:70327595-70327614 None:intergenic 35.0%
TTAAAAGCAAGCTATCGAAG+AGG + chr3_2:70327649-70327668 None:intergenic 35.0%
!!! TCTTCGATAGCTTGCTTTTA+AGG - chr3_2:70327648-70327667 Msa0421390:CDS 35.0%
!!! CTTCGATAGCTTGCTTTTAA+GGG - chr3_2:70327649-70327668 Msa0421390:CDS 35.0%
AAATCAGAAGGGCTAAATGA+TGG - chr3_2:70327809-70327828 Msa0421390:intron 35.0%
GGTTCTACTTAATTAGGTGT+TGG - chr3_2:70327830-70327849 Msa0421390:intron 35.0%
TATAGGTAATTGGATCTGTG+GGG - chr3_2:70328065-70328084 Msa0421390:intron 35.0%
TTCAAAATTCCCTTTGAACC+AGG + chr3_2:70328151-70328170 None:intergenic 35.0%
!! CAAAGGGAATTTTGAAAGTC+AGG - chr3_2:70328155-70328174 Msa0421390:CDS 35.0%
!! AAGGGAATTTTGAAAGTCAG+GGG - chr3_2:70328157-70328176 Msa0421390:CDS 35.0%
AATACTTGAAGACTGGAACA+AGG - chr3_2:70328370-70328389 Msa0421390:intron 35.0%
TTGCTTGTTCATCAAGGAAA+AGG + chr3_2:70328441-70328460 None:intergenic 35.0%
CAAAAGTTGCTTGTTCATCA+AGG + chr3_2:70328447-70328466 None:intergenic 35.0%
AGAATCCTTCAGCTACAAAT+CGG - chr3_2:70328585-70328604 Msa0421390:intron 35.0%
TACAAATCGGGTCATTGATA+GGG - chr3_2:70328598-70328617 Msa0421390:intron 35.0%
!!! TGTGTATGTTGCTTTTCATG+TGG - chr3_2:70328761-70328780 Msa0421390:intron 35.0%
TCATGTGTTTCAACATGAGA+AGG - chr3_2:70328971-70328990 Msa0421390:intron 35.0%
AGAAGGTGAAAATGTTGAAC+CGG - chr3_2:70328988-70329007 Msa0421390:intron 35.0%
ACAAATTGTTGTCATTGGTC+AGG - chr3_2:70329051-70329070 Msa0421390:intron 35.0%
CAGGTGAGTTTAAATCTTGA+CGG - chr3_2:70329070-70329089 Msa0421390:intron 35.0%
AAGTAAGACAAGATCTTACC+AGG + chr3_2:70329329-70329348 None:intergenic 35.0%
AGATCTTGTCTTACTTCTGT+TGG - chr3_2:70329333-70329352 Msa0421390:intron 35.0%
!! TGTTGGTGATTGTGTTTACA+AGG - chr3_2:70329350-70329369 Msa0421390:intron 35.0%
GTGATTGTGTTTACAAGGAA+GGG - chr3_2:70329355-70329374 Msa0421390:intron 35.0%
TCAGTTAAAGTTTGCGTGAA+TGG - chr3_2:70329414-70329433 Msa0421390:intron 35.0%
GTGAAACTAAATACAAGGCT+AGG - chr3_2:70329480-70329499 Msa0421390:CDS 35.0%
GAAACTAAATACAAGGCTAG+GGG - chr3_2:70329482-70329501 Msa0421390:CDS 35.0%
ATGCTTAATCTAACCGTGAA+GGG + chr3_2:70329619-70329638 None:intergenic 35.0%
ATAGAGTTATGGCTCAATAC+AGG - chr3_2:70329757-70329776 Msa0421390:intron 35.0%
TAGAGTTATGGCTCAATACA+GGG - chr3_2:70329758-70329777 Msa0421390:intron 35.0%
GTAAACCAACCTAATGTCAA+TGG - chr3_2:70329803-70329822 Msa0421390:intron 35.0%
ACATACCATTGACATTAGGT+TGG + chr3_2:70329811-70329830 None:intergenic 35.0%
GTAAAATTACCTAATGCCAG+TGG - chr3_2:70329880-70329899 Msa0421390:intron 35.0%
GGCAGAAGAAGAAGAGATAA+TGG + chr3_2:70323766-70323785 None:intergenic 40.0%
CTTCTTCTGCCAAATTCCAA+TGG - chr3_2:70323775-70323794 Msa0421390:three_prime_UTR 40.0%
AAGTTACCTCGGATTGAGTA+TGG + chr3_2:70323931-70323950 None:intergenic 40.0%
GCGTATATGAATAGTACTGC+AGG + chr3_2:70324099-70324118 None:intergenic 40.0%
! TTAGAAAGTTCTGGCAATGG+TGG - chr3_2:70324271-70324290 Msa0421390:intron 40.0%
GGAAAGCAGTTCCTGATATT+TGG - chr3_2:70324311-70324330 Msa0421390:intron 40.0%
GCAGAAGTTCTCCAAATATC+AGG + chr3_2:70324325-70324344 None:intergenic 40.0%
AGAACTTCTGCAGAGAAGTA+TGG - chr3_2:70324334-70324353 Msa0421390:intron 40.0%
GGTATGGTTAGAGTAGAGTT+TGG - chr3_2:70324481-70324500 Msa0421390:intron 40.0%
!!! TGGTTGAGTTTTATTGGTGG+TGG - chr3_2:70324721-70324740 Msa0421390:intron 40.0%
!!! GGTTGAGTTTTATTGGTGGT+GGG - chr3_2:70324722-70324741 Msa0421390:intron 40.0%
CAAGGGATAAGTTTCACACA+TGG + chr3_2:70325024-70325043 None:intergenic 40.0%
CTTACCAACATTTCAGTTGG+AGG - chr3_2:70325085-70325104 Msa0421390:intron 40.0%
ATTACCTAAGGTCCAGTTTG+GGG - chr3_2:70325265-70325284 Msa0421390:intron 40.0%
AAGGTCGTTATCATCTACAC+TGG - chr3_2:70325385-70325404 Msa0421390:intron 40.0%
CCTAGACTAAACACACAGTA+TGG + chr3_2:70325440-70325459 None:intergenic 40.0%
CCATACTGTGTGTTTAGTCT+AGG - chr3_2:70325437-70325456 Msa0421390:intron 40.0%
TGTGTTTAGTCTAGGCATGA+TGG - chr3_2:70325445-70325464 Msa0421390:intron 40.0%
TTGGAGCAATCAATGTGGTT+AGG - chr3_2:70325471-70325490 Msa0421390:intron 40.0%
TGGAGCAATCAATGTGGTTA+GGG - chr3_2:70325472-70325491 Msa0421390:intron 40.0%
GGTGCCAATCTATACATTCA+TGG - chr3_2:70325679-70325698 Msa0421390:CDS 40.0%
CTCATCTACAATGTGATTGC+AGG - chr3_2:70325852-70325871 Msa0421390:intron 40.0%
GGTACTACTGGAAATCCTAA+AGG - chr3_2:70325936-70325955 Msa0421390:intron 40.0%
!! TGGGTTAGCATAACACCTTT+AGG + chr3_2:70325954-70325973 None:intergenic 40.0%
CCTGATGCAAAAGATTCTGA+TGG + chr3_2:70325974-70325993 None:intergenic 40.0%
! CCATCAGAATCTTTTGCATC+AGG - chr3_2:70325971-70325990 Msa0421390:intron 40.0%
AATCTATCTCCAGCTTCAGT+AGG + chr3_2:70326153-70326172 None:intergenic 40.0%
TTCTAAGTATGTTGCCTCCT+TGG - chr3_2:70326172-70326191 Msa0421390:intron 40.0%
!!! TGTTTTTGGTTCCTCTGTAG+TGG - chr3_2:70326533-70326552 Msa0421390:CDS 40.0%
!!! GTTTTTGGTTCCTCTGTAGT+GGG - chr3_2:70326534-70326553 Msa0421390:CDS 40.0%
TTGTCGCTCTCACATTCATA+AGG - chr3_2:70326597-70326616 Msa0421390:intron 40.0%
TGTCGCTCTCACATTCATAA+GGG - chr3_2:70326598-70326617 Msa0421390:intron 40.0%
ACATTCATAAGGGTCAGCTT+AGG - chr3_2:70326608-70326627 Msa0421390:intron 40.0%
GGAAGGTGATTTCTGATTCT+TGG + chr3_2:70326868-70326887 None:intergenic 40.0%
!! ATGCAATGTTGGATTGGCTA+TGG - chr3_2:70326895-70326914 Msa0421390:CDS 40.0%
!! TGCAATGTTGGATTGGCTAT+GGG - chr3_2:70326896-70326915 Msa0421390:CDS 40.0%
TTGGCTATGGGCAAGAATTA+TGG - chr3_2:70326908-70326927 Msa0421390:CDS 40.0%
!! AATGCATCACTTTTCTGCTC+AGG - chr3_2:70327211-70327230 Msa0421390:CDS 40.0%
ACCTTCATGTGATAGAGACT+TGG - chr3_2:70327548-70327567 Msa0421390:intron 40.0%
CCTTCATGTGATAGAGACTT+GGG - chr3_2:70327549-70327568 Msa0421390:intron 40.0%
ATGGTGTAGTATGGGATACT+CGG - chr3_2:70327597-70327616 Msa0421390:CDS 40.0%
!!! GATAGCTTGCTTTTAAGGGA+GGG - chr3_2:70327653-70327672 Msa0421390:CDS 40.0%
ACAAACCTCTAGACAGAGAT+CGG + chr3_2:70327945-70327964 None:intergenic 40.0%
AAAATTCCCTTTGAACCAGG+TGG + chr3_2:70328148-70328167 None:intergenic 40.0%
AGTACCCCTTCATCAATTGT+GGG + chr3_2:70328183-70328202 None:intergenic 40.0%
TAGTACCCCTTCATCAATTG+TGG + chr3_2:70328184-70328203 None:intergenic 40.0%
!! ATTGATGAAGGGGTACTACA+AGG - chr3_2:70328186-70328205 Msa0421390:CDS 40.0%
! TGAACAAGCAACTTTTGCGA+TGG - chr3_2:70328450-70328469 Msa0421390:intron 40.0%
GAATCCTTCAGCTACAAATC+GGG - chr3_2:70328586-70328605 Msa0421390:intron 40.0%
CTACAAATCGGGTCATTGAT+AGG - chr3_2:70328597-70328616 Msa0421390:intron 40.0%
TGAATACTGGTGACATAGGT+TGG - chr3_2:70328630-70328649 Msa0421390:intron 40.0%
! TCTACCTGATGAAAGCACAA+TGG + chr3_2:70328732-70328751 None:intergenic 40.0%
CATAGAAAGCCTGTTGTCAT+TGG - chr3_2:70328923-70328942 Msa0421390:intron 40.0%
GAAGGTGAAAATGTTGAACC+GGG - chr3_2:70328989-70329008 Msa0421390:intron 40.0%
TTGTATGAGGTTACTCCTCA+TGG + chr3_2:70329032-70329051 None:intergenic 40.0%
ATATAGGATAAACGGCGTCT+AGG - chr3_2:70329178-70329197 Msa0421390:intron 40.0%
CTGACTAGCATCTGAACTAT+TGG + chr3_2:70329269-70329288 None:intergenic 40.0%
CAATAGTTCAGATGCTAGTC+AGG - chr3_2:70329267-70329286 Msa0421390:intron 40.0%
GGTGATTGTGTTTACAAGGA+AGG - chr3_2:70329354-70329373 Msa0421390:intron 40.0%
TCAGGGTTTCCATTTCAGAT+TGG - chr3_2:70329571-70329590 Msa0421390:CDS 40.0%
CAGGGTTTCCATTTCAGATT+GGG - chr3_2:70329572-70329591 Msa0421390:CDS 40.0%
GGATCATTTACGAGAAGGAT+TGG + chr3_2:70329598-70329617 None:intergenic 40.0%
TGAAGGGATCATTTACGAGA+AGG + chr3_2:70329603-70329622 None:intergenic 40.0%
TCTCGTAAATGATCCCTTCA+CGG - chr3_2:70329603-70329622 Msa0421390:intron 40.0%
GATGCTTAATCTAACCGTGA+AGG + chr3_2:70329620-70329639 None:intergenic 40.0%
ACCCACAATGAAAGTTCGAA+GGG - chr3_2:70329734-70329753 Msa0421390:intron 40.0%
TCCCTTCGAACTTTCATTGT+GGG + chr3_2:70329738-70329757 None:intergenic 40.0%
ATCCCTTCGAACTTTCATTG+TGG + chr3_2:70329739-70329758 None:intergenic 40.0%
AGTTCGAAGGGATAGAGTTA+TGG - chr3_2:70329746-70329765 Msa0421390:intron 40.0%
AGCTCAAACACAGGATCAAA+TGG - chr3_2:70329844-70329863 Msa0421390:intron 40.0%
CTTCTGCCAAATTCCAATGG+CGG - chr3_2:70323778-70323797 Msa0421390:three_prime_UTR 45.0%
TTCTGCCAAATTCCAATGGC+GGG - chr3_2:70323779-70323798 Msa0421390:three_prime_UTR 45.0%
GAATTCCCGCCATTGGAATT+TGG + chr3_2:70323787-70323806 None:intergenic 45.0%
TTGTAGTTAGCGGAGGTGAT+AGG + chr3_2:70323809-70323828 None:intergenic 45.0%
AGCATAGTTGTAGTTAGCGG+AGG + chr3_2:70323816-70323835 None:intergenic 45.0%
GAAGAGAGGAAGTGAATGGA+TGG + chr3_2:70323843-70323862 None:intergenic 45.0%
CGAAGAAGAGAGGAAGTGAA+TGG + chr3_2:70323847-70323866 None:intergenic 45.0%
AGAGGTTGGAGAAACGTTGA+TGG + chr3_2:70323891-70323910 None:intergenic 45.0%
AAGACGCGAAAAGAAGAGGT+TGG + chr3_2:70323905-70323924 None:intergenic 45.0%
GCAAAAGACGCGAAAAGAAG+AGG + chr3_2:70323909-70323928 None:intergenic 45.0%
! CTTTTGCCATACTCAATCCG+AGG - chr3_2:70323922-70323941 Msa0421390:three_prime_UTR 45.0%
TCTACGAGATGTTAGCTCAG+TGG + chr3_2:70324053-70324072 None:intergenic 45.0%
GCATCCTCCAACTGAAATGT+TGG + chr3_2:70325092-70325111 None:intergenic 45.0%
AAATTGCAACCACCCCAAAC+TGG + chr3_2:70325280-70325299 None:intergenic 45.0%
AGTCTAGGCATGATGGCAAT+TGG - chr3_2:70325452-70325471 Msa0421390:intron 45.0%
GGCAATTGGAGCAATCAATG+TGG - chr3_2:70325466-70325485 Msa0421390:intron 45.0%
GGAGCAATCAATGTGGTTAG+GGG - chr3_2:70325473-70325492 Msa0421390:intron 45.0%
TCAATGTGGTTAGGGGTTCA+AGG - chr3_2:70325480-70325499 Msa0421390:intron 45.0%
CTAGTGCAACACTTTCAGAG+TGG + chr3_2:70325538-70325557 None:intergenic 45.0%
!! TGAAAGTGTTGCACTAGCTG+TGG - chr3_2:70325541-70325560 Msa0421390:intron 45.0%
! CCTTGTTTGCTTCACTGACA+AGG + chr3_2:70325658-70325677 None:intergenic 45.0%
CCTTGTCAGTGAAGCAAACA+AGG - chr3_2:70325655-70325674 Msa0421390:CDS 45.0%
TGTCAGTGAAGCAAACAAGG+AGG - chr3_2:70325658-70325677 Msa0421390:CDS 45.0%
GTGTACACAAGTGGTACTAC+TGG - chr3_2:70325924-70325943 Msa0421390:intron 45.0%
CTTTCATATGCATGCCAAGG+AGG + chr3_2:70326189-70326208 None:intergenic 45.0%
GCTCTTTCATATGCATGCCA+AGG + chr3_2:70326192-70326211 None:intergenic 45.0%
CACTACCGTGAGAAACTTGA+AGG - chr3_2:70326254-70326273 Msa0421390:intron 45.0%
AAGGGTCAGCTTAGGATACA+TGG - chr3_2:70326616-70326635 Msa0421390:intron 45.0%
GGAGTGTAAGCGCATTTATG+AGG - chr3_2:70326637-70326656 Msa0421390:intron 45.0%
GTAAGCGCATTTATGAGGTC+TGG - chr3_2:70326642-70326661 Msa0421390:intron 45.0%
! GATTGACTGACTCTGTTGAG+AGG - chr3_2:70327088-70327107 Msa0421390:intron 45.0%
TGTTGAGAGGCAAAACGTCT+TGG - chr3_2:70327101-70327120 Msa0421390:intron 45.0%
GTTGAGAGGCAAAACGTCTT+GGG - chr3_2:70327102-70327121 Msa0421390:intron 45.0%
! CAAAACCTTTTGCACTCTGC+AGG - chr3_2:70327239-70327258 Msa0421390:CDS 45.0%
CCCAAGTCTCTATCACATGA+AGG + chr3_2:70327552-70327571 None:intergenic 45.0%
GCTATCGAAGAGGAATAACC+AGG + chr3_2:70327639-70327658 None:intergenic 45.0%
!!! CGATAGCTTGCTTTTAAGGG+AGG - chr3_2:70327652-70327671 Msa0421390:CDS 45.0%
! AGATCGGGAAGAAAGGTGTA+CGG + chr3_2:70327929-70327948 None:intergenic 45.0%
TAGACAGAGATCGGGAAGAA+AGG + chr3_2:70327936-70327955 None:intergenic 45.0%
CAAACCTCTAGACAGAGATC+GGG + chr3_2:70327944-70327963 None:intergenic 45.0%
AGTTCTTCCACCTGGTTCAA+AGG - chr3_2:70328138-70328157 Msa0421390:CDS 45.0%
GTTCTTCCACCTGGTTCAAA+GGG - chr3_2:70328139-70328158 Msa0421390:CDS 45.0%
GCTCACATCACATTCATCCA+CGG - chr3_2:70328504-70328523 Msa0421390:intron 45.0%
CTCACATCACATTCATCCAC+GGG - chr3_2:70328505-70328524 Msa0421390:intron 45.0%
TCACATCACATTCATCCACG+GGG - chr3_2:70328506-70328525 Msa0421390:intron 45.0%
CATGAGTAAATAAGACCCCG+TGG + chr3_2:70328524-70328543 None:intergenic 45.0%
! ATGACCCGATTTGTAGCTGA+AGG + chr3_2:70328593-70328612 None:intergenic 45.0%
AATCGGGTCATTGATAGGGA+TGG - chr3_2:70328602-70328621 Msa0421390:intron 45.0%
TGGCTGAATACTGGTGACAT+AGG - chr3_2:70328626-70328645 Msa0421390:intron 45.0%
ATTGCTGCCCACCATTCAAT+TGG - chr3_2:70328653-70328672 Msa0421390:CDS 45.0%
TTGCTGCCCACCATTCAATT+GGG - chr3_2:70328654-70328673 Msa0421390:CDS 45.0%
! GGTGGTGTGATTGTTGTTGA+AGG - chr3_2:70328692-70328711 Msa0421390:CDS 45.0%
GCACAATGGTGTCTTTAGCA+CGG + chr3_2:70328718-70328737 None:intergenic 45.0%
GACACCATTGTGCTTTCATC+AGG - chr3_2:70328725-70328744 Msa0421390:CDS 45.0%
GAGAAAGAGCCAATGACAAC+AGG + chr3_2:70328935-70328954 None:intergenic 45.0%
!! AGGCTAGGGGTGTTATGAAA+CGG - chr3_2:70329495-70329514 Msa0421390:CDS 45.0%
ATCACTTCCCATTATCGTGC+AGG - chr3_2:70329545-70329564 Msa0421390:CDS 45.0%
CTGATGTCCTGCACGATAAT+GGG + chr3_2:70329555-70329574 None:intergenic 45.0%
CATTATCGTGCAGGACATCA+GGG - chr3_2:70329554-70329573 Msa0421390:CDS 45.0%
!! AGGATTGGCCCAATCTGAAA+TGG + chr3_2:70329583-70329602 None:intergenic 45.0%
CACCCACAATGAAAGTTCGA+AGG - chr3_2:70329733-70329752 Msa0421390:intron 45.0%
! TCTATTGTGCCACTGGCATT+AGG + chr3_2:70329892-70329911 None:intergenic 45.0%
GTGATAGGAATTCCCGCCAT+TGG + chr3_2:70323794-70323813 None:intergenic 50.0%
!! GTTGATGGTGGTGGTGAAGT+TGG + chr3_2:70323876-70323895 None:intergenic 50.0%
!! TGGAGAAACGTTGATGGTGG+TGG + chr3_2:70323885-70323904 None:intergenic 50.0%
! GGTTGGAGAAACGTTGATGG+TGG + chr3_2:70323888-70323907 None:intergenic 50.0%
! AAGTTCTGGCAATGGTGGTG+TGG - chr3_2:70324276-70324295 Msa0421390:intron 50.0%
!! GTGGTGTGGCTTTAGATGAG+TGG - chr3_2:70324290-70324309 Msa0421390:intron 50.0%
GCTGAGGGGTTGAGAGTTAT+TGG - chr3_2:70325125-70325144 Msa0421390:CDS 50.0%
TTGCTGATAACTCGTGTCGC+TGG - chr3_2:70325177-70325196 Msa0421390:CDS 50.0%
! TTTTGGCCGACAAAGTCGCA+CGG - chr3_2:70325712-70325731 Msa0421390:CDS 50.0%
GCAATACCGTGCGACTTTGT+CGG + chr3_2:70325721-70325740 None:intergenic 50.0%
AGGTGGCATACTGGCATCAT+GGG + chr3_2:70325750-70325769 None:intergenic 50.0%
TAGGTGGCATACTGGCATCA+TGG + chr3_2:70325751-70325770 None:intergenic 50.0%
! AGAAGGTGTAGGTGGCATAC+TGG + chr3_2:70325759-70325778 None:intergenic 50.0%
GCTACTCTCGTGTACACAAG+TGG - chr3_2:70325915-70325934 Msa0421390:intron 50.0%
GACGTTGTACCTACTGAAGC+TGG - chr3_2:70326141-70326160 Msa0421390:intron 50.0%
GCTTCATGATCCCACTACAG+AGG + chr3_2:70326547-70326566 None:intergenic 50.0%
ACTCTGCAGGCTGCAATAAG+TGG - chr3_2:70327252-70327271 Msa0421390:CDS 50.0%
! CTTCACCGGTTATTGCTGCT+CGG - chr3_2:70327444-70327463 Msa0421390:intron 50.0%
! GGGGTGCTCAAAGTCCAAAA+TGG - chr3_2:70327578-70327597 Msa0421390:CDS 50.0%
!! TTTTAAGGGAGGGTTCCTCG+AGG - chr3_2:70327663-70327682 Msa0421390:CDS 50.0%
TCTTCCCGATCTCTGTCTAG+AGG - chr3_2:70327937-70327956 Msa0421390:CDS 50.0%
ACTGGTGAAGTTCTTCCACC+TGG - chr3_2:70328130-70328149 Msa0421390:CDS 50.0%
AGGGGCCCACAATTGATGAA+GGG - chr3_2:70328175-70328194 Msa0421390:CDS 50.0%
ACTCCGCCCAATTGAATGGT+GGG + chr3_2:70328663-70328682 None:intergenic 50.0%
TACGACTCCGCCCAATTGAA+TGG + chr3_2:70328667-70328686 None:intergenic 50.0%
ATTGGGCGGAGTCGTAATTC+TGG - chr3_2:70328671-70328690 Msa0421390:CDS 50.0%
AGCTTGAAGAAGCTGCCATG+AGG - chr3_2:70329014-70329033 Msa0421390:intron 50.0%
CCTGATGTCCTGCACGATAA+TGG + chr3_2:70329556-70329575 None:intergenic 50.0%
CCATTATCGTGCAGGACATC+AGG - chr3_2:70329553-70329572 Msa0421390:CDS 50.0%
GTACGAGTCTATTGTGCCAC+TGG + chr3_2:70329899-70329918 None:intergenic 50.0%
TTGGTGCGAGCGAAGAAGAG+AGG + chr3_2:70323857-70323876 None:intergenic 55.0%
!! CGCTGGCTTGTAGCAGATCA+AGG - chr3_2:70325194-70325213 Msa0421390:CDS 55.0%
ACCTAAGGTCCAGTTTGGGG+TGG - chr3_2:70325268-70325287 Msa0421390:intron 55.0%
ACCACCCCAAACTGGACCTT+AGG + chr3_2:70325272-70325291 None:intergenic 55.0%
TGGCATACTGGCATCATGGG+AGG + chr3_2:70325747-70325766 None:intergenic 55.0%
TGCAGCCTGCAGAGTGCAAA+AGG + chr3_2:70327247-70327266 None:intergenic 55.0%
CTGCAGGCTGCAATAAGTGG+TGG - chr3_2:70327255-70327274 Msa0421390:CDS 55.0%
CAGGCTGCAATAAGTGGTGG+TGG - chr3_2:70327258-70327277 Msa0421390:CDS 55.0%
AGTCGCCGAGCAGCAATAAC+CGG + chr3_2:70327452-70327471 None:intergenic 55.0%
GTTATTGCTGCTCGGCGACT+TGG - chr3_2:70327452-70327471 Msa0421390:intron 55.0%
CAGGGGCCCACAATTGATGA+AGG - chr3_2:70328174-70328193 Msa0421390:CDS 55.0%
GGGGCCCACAATTGATGAAG+GGG - chr3_2:70328176-70328195 Msa0421390:CDS 55.0%
GGGTCATTGATAGGGATGGC+TGG - chr3_2:70328606-70328625 Msa0421390:intron 55.0%
! AGGGATGGCTGGCTGAATAC+TGG - chr3_2:70328617-70328636 Msa0421390:intron 55.0%
CTGCCCACCATTCAATTGGG+CGG - chr3_2:70328657-70328676 Msa0421390:CDS 55.0%
GACTCCGCCCAATTGAATGG+TGG + chr3_2:70328664-70328683 None:intergenic 55.0%
GCAGCTTCTTCAAGCTCTCC+CGG + chr3_2:70329010-70329029 None:intergenic 55.0%
AGGGAGGGTTCCTCGAGGAT+TGG - chr3_2:70327668-70327687 Msa0421390:CDS 60.0%
GGGCGGAGTCGTAATTCTGG+TGG - chr3_2:70328674-70328693 Msa0421390:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 70323698 70330148 70323698 ID=Msa0421390;Name=Msa0421390
chr3_2 mRNA 70323698 70330148 70323698 ID=Msa0421390-mRNA-1;Parent=Msa0421390;Name=Msa0421390-mRNA-1;_AED=0.23;_eAED=0.23;_QI=96|0.94|0.94|1|0.94|0.94|18|254|719
chr3_2 exon 70323698 70323815 70323698 ID=Msa0421390-mRNA-1:exon:16913;Parent=Msa0421390-mRNA-1
chr3_2 exon 70323904 70324132 70323904 ID=Msa0421390-mRNA-1:exon:16912;Parent=Msa0421390-mRNA-1
chr3_2 exon 70324222 70324279 70324222 ID=Msa0421390-mRNA-1:exon:16911;Parent=Msa0421390-mRNA-1
chr3_2 exon 70324517 70324662 70324517 ID=Msa0421390-mRNA-1:exon:16910;Parent=Msa0421390-mRNA-1
chr3_2 exon 70324774 70324853 70324774 ID=Msa0421390-mRNA-1:exon:16909;Parent=Msa0421390-mRNA-1
chr3_2 exon 70325100 70325259 70325100 ID=Msa0421390-mRNA-1:exon:16908;Parent=Msa0421390-mRNA-1
chr3_2 exon 70325639 70325776 70325639 ID=Msa0421390-mRNA-1:exon:16907;Parent=Msa0421390-mRNA-1
chr3_2 exon 70326365 70326445 70326365 ID=Msa0421390-mRNA-1:exon:16906;Parent=Msa0421390-mRNA-1
chr3_2 exon 70326532 70326585 70326532 ID=Msa0421390-mRNA-1:exon:16905;Parent=Msa0421390-mRNA-1
chr3_2 exon 70326836 70326994 70326836 ID=Msa0421390-mRNA-1:exon:16904;Parent=Msa0421390-mRNA-1
chr3_2 exon 70327188 70327293 70327188 ID=Msa0421390-mRNA-1:exon:16903;Parent=Msa0421390-mRNA-1
chr3_2 exon 70327394 70327461 70327394 ID=Msa0421390-mRNA-1:exon:16902;Parent=Msa0421390-mRNA-1
chr3_2 exon 70327571 70327720 70327571 ID=Msa0421390-mRNA-1:exon:16901;Parent=Msa0421390-mRNA-1
chr3_2 exon 70327854 70327972 70327854 ID=Msa0421390-mRNA-1:exon:16900;Parent=Msa0421390-mRNA-1
chr3_2 exon 70328088 70328387 70328088 ID=Msa0421390-mRNA-1:exon:16899;Parent=Msa0421390-mRNA-1
chr3_2 exon 70328631 70328745 70328631 ID=Msa0421390-mRNA-1:exon:16898;Parent=Msa0421390-mRNA-1
chr3_2 exon 70329429 70329611 70329429 ID=Msa0421390-mRNA-1:exon:16897;Parent=Msa0421390-mRNA-1
chr3_2 exon 70329903 70330148 70329903 ID=Msa0421390-mRNA-1:exon:16896;Parent=Msa0421390-mRNA-1
chr3_2 five_prime_UTR 70330053 70330148 70330053 ID=Msa0421390-mRNA-1:five_prime_utr;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70329903 70330052 70329903 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70329429 70329611 70329429 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70328631 70328745 70328631 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70328088 70328387 70328088 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70327854 70327972 70327854 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70327571 70327720 70327571 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70327394 70327461 70327394 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70327188 70327293 70327188 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70326836 70326994 70326836 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70326532 70326585 70326532 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70326365 70326445 70326365 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70325639 70325776 70325639 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70325100 70325259 70325100 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70324774 70324853 70324774 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70324517 70324662 70324517 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70324222 70324279 70324222 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 CDS 70324040 70324132 70324040 ID=Msa0421390-mRNA-1:cds;Parent=Msa0421390-mRNA-1
chr3_2 three_prime_UTR 70323904 70324039 70323904 ID=Msa0421390-mRNA-1:three_prime_utr;Parent=Msa0421390-mRNA-1
chr3_2 three_prime_UTR 70323698 70323815 70323698 ID=Msa0421390-mRNA-1:three_prime_utr;Parent=Msa0421390-mRNA-1
Gene Sequence

>Msa0421390

ATGGCGGGAATTCCTATCACCTCCGCTAACTACAACTATGCTTCTTCCATCCATTCACTTCCTCTCTTCTTCGCTCGCACCAACTTCACCACCACCATCAACGTTTCTCCAACCTCTTCTTTTCGCGTCTTTTGCCATACTCAATCCGAGACAAAGAAAACGGAGATAAGAAGGTTTTCCCCTTTATTAGAAAGTTCTGGCAATGGTGGTGTGGCTTTAGATGAGTGGAAAGCAGTTCCTGATATTTGGAGAACTTCTGCAGAGAAGTATGGTGATAAAGTAGCTTTGGTAGATCAATATCATGATCCTCCTTCAACTATGACATACAAACAGTTGGAGGATGCAATTTTAAACTTTGCTGAGGGGTTGAGAGTTATTGGAGTAAAACCAGATGAGAAAATTGCTCTTTTTGCTGATAACTCGTGTCGCTGGCTTGTAGCAGATCAAGGCATGATGGCAATTGGAGCAATCAATGTGGTTAGGGGTTCAAGGTCATCAATTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTATAATCAGATTGCAAAACCATTTTATTTGAAGACCTCAATCAGATTTATTATTCTGCTTTGGGGAGAAAAATCAAGCCTTGTCAGTGAAGCAAACAAGGAGGTGCCAATCTATACATTCATGGAAGTCATAAATTTTGGCCGACAAAGTCGCACGGTATTGCACGCCTCCCATGATGCCAGACAACACTATATGTTTGAAACAATAAAATTGGATGACATTGCTACTCTCGTGTACACAAGTGGTACTACTGGAAATCCTAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATCAAACACTTATCGGACGTTGTACCTACTGAAGCTGGAGATAGATTTCTAAGTATGTTGCCTCCTTGGCATGCATATGAAAGAGCTTGCGAGTATTTTATTTTCTCACGTGGTCTTGAACATATATACACTACCGTGAGAAACTTGAAGGATGATTTGGGACGTTATAAGCCACATTTAATGGTTTCTGTTCCTTTAGTTTTTGAAACTTTGTACAGTGGGATCATGAAGCAGATATCTACAAGCTCACTTGTTAGAAAACTTGTCGCTCTCACATTCATAAGGGTCAGCTTAGGATACATGGAGTGTAAGCGCATTTATGAGGGTAAATGCTTAACCAAGAATCAGAAATCACCTTCCTATCTCTATGCAATGTTGGATTGGCTATGGGCAAGAATTATGGCTGCAATATTATATCCAGTTCATATGCTGGCAAATAAATTGGTTTACAGTAAAATCCGTTCAACTATTGGGATATCAACGGCTGCAATAAGTGGTGGTGGTAGCTTACCTTCTCATGTTGACAAGTTTTTTGAGGCTATTGGTTTGAATTTGCAGAATGGATATGGTTTAACAGAAACTTCACCGGTTATTGCTGCTCGGCGACTTGGTTGTGACGTAATTGGATCTGTGGGGTATCCACTTAAGCATACAGAATTCAAAGTTGTAGATTCTGAAACTGGTGAAGTTCTTCCACCTGGTTCAAAGGGAATTTTGAAAGTCAGGGGCCCACAATTGATGAAGGGGTACTACAAGAATCCTTCAGCTACAAATCGGGTCATTGATAGGGATGGCTGGCTGAATACTGGTGACATAGGTTGGATTGCTGCCCACCATTCAATTGGGCGGAGTCGTAATTCTGGTGGTGTGATTGTTGTTGAAGGCCGTGCTAAAGACACCATTGTGCTTTCATCAGGTGAAAATGTTGAACCGGGAGAGCTTGAAGAAGCTGCCATGAGGAGTAACCTCATACAACAAATTGTTGTCATTGGTCAGGATAAACGGCGTCTAGGAGCTGTAATTGTTCCTAACAAAGAAGAAGTCTTAAAGGCAGCAAAGAAATTGTCAATTATAGATTCCAATAGTTCAGATGCTAGTCAGGAAAAAGTGACCAGTCTAATATATGATGAACTAAAGACCTGGACATCAGGGTTTCCATTTCAGATTGGGCCAATCCTTCTCGTAAATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACAATGAAAGTTCGAAGGGATAGAGTTATGGCTCAATACAGGGACCAGATAGAGAATCTATACAAGTAA
Protein sequence

>Msa0421390

MAGIPITSANYNYASSIHSLPLFFARTNFTTTINVSPTSSFRVFCHTQSETKKTEIRRFSPLLESSGNGGVALDEWKAVPDIWRTSAEKYGDKVALVDQYHDPPSTMTYKQLEDAILNFAEGLRVIGVKPDEKIALFADNSCRWLVADQGMMAIGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMYNQIAKPFYLKTSIRFIILLWGEKSSLVSEANKEVPIYTFMEVINFGRQSRTVLHASHDARQHYMFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTEAGDRFLSMLPPWHAYERACEYFIFSRGLEHIYTTVRNLKDDLGRYKPHLMVSVPLVFETLYSGIMKQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKSPSYLYAMLDWLWARIMAAILYPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFFEAIGLNLQNGYGLTETSPVIAARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPSATNRVIDRDGWLNTGDIGWIAAHHSIGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEAAMRSNLIQQIVVIGQDKRRLGAVIVPNKEEVLKAAKKLSIIDSNSSDASQEKVTSLIYDELKTWTSGFPFQIGPILLVNDPFTIDNGLMTPTMKVRRDRVMAQYRDQIENLYK*