Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0029020 | -0.811878 | 5.617465e-51 | -8.615850e-47 |
| Msa0012780 | Msa0029020 | 0.850617 | 1.512496e-60 | -8.615850e-47 |
| Msa0021980 | Msa0029020 | -0.801033 | 1.089500e-48 | -8.615850e-47 |
| Msa0029010 | Msa0029020 | 0.907076 | 7.485015e-81 | -8.615850e-47 |
| Msa0029020 | Msa0035110 | -0.832894 | 7.283658e-56 | -8.615850e-47 |
| Msa0029020 | Msa0036150 | -0.803516 | 3.359126e-49 | -8.615850e-47 |
| Msa0029020 | Msa0038350 | 0.817120 | 3.887517e-52 | -8.615850e-47 |
| Msa0029020 | Msa0043240 | 0.822811 | 1.940333e-53 | -8.615850e-47 |
| Msa0029020 | Msa0053480 | -0.809451 | 1.879602e-50 | -8.615850e-47 |
| Msa0029020 | Msa0053960 | -0.805649 | 1.205320e-49 | -8.615850e-47 |
| Msa0029020 | Msa0059880 | 0.815999 | 6.932457e-52 | -8.615850e-47 |
| Msa0029020 | Msa0059960 | 0.803098 | 4.100326e-49 | -8.615850e-47 |
| Msa0029020 | Msa0061600 | 0.815688 | 8.131140e-52 | -8.615850e-47 |
| Msa0029020 | Msa0070740 | -0.803110 | 4.075383e-49 | -8.615850e-47 |
| Msa0029020 | Msa0076650 | 0.946473 | 4.317101e-105 | -8.615850e-47 |
| Msa0029020 | Msa0088470 | 0.808810 | 2.578722e-50 | -8.615850e-47 |
| Msa0029020 | Msa0090040 | 0.836418 | 9.469342e-57 | -8.615850e-47 |
| Msa0029020 | Msa0096510 | -0.809755 | 1.617253e-50 | -8.615850e-47 |
| Msa0029020 | Msa0106110 | 0.848293 | 6.721229e-60 | -8.615850e-47 |
| Msa0029020 | Msa0106120 | 0.816535 | 5.260416e-52 | -8.615850e-47 |
| Msa0029020 | Msa0130100 | -0.802951 | 4.396596e-49 | -8.615850e-47 |
| Msa0029020 | Msa0137120 | 0.835360 | 1.756112e-56 | -8.615850e-47 |
| Msa0029020 | Msa0148430 | -0.801350 | 9.385466e-49 | -8.615850e-47 |
| Msa0029020 | Msa0152650 | 0.814575 | 1.436799e-51 | -8.615850e-47 |
| Msa0029020 | Msa0152740 | 0.829088 | 6.260522e-55 | -8.615850e-47 |
| Msa0029020 | Msa0153440 | -0.807454 | 5.015560e-50 | -8.615850e-47 |
| Msa0029020 | Msa0169050 | 0.898616 | 4.457798e-77 | -8.615850e-47 |
| Msa0029020 | Msa0175920 | -0.834012 | 3.833490e-56 | -8.615850e-47 |
| Msa0029020 | Msa0182310 | 0.816625 | 5.020672e-52 | -8.615850e-47 |
| Msa0029020 | Msa0190980 | -0.805885 | 1.075658e-49 | -8.615850e-47 |
| Msa0029020 | Msa0198170 | 0.811259 | 7.656911e-51 | -8.615850e-47 |
| Msa0029020 | Msa0198190 | 0.804410 | 2.189524e-49 | -8.615850e-47 |
| Msa0029020 | Msa0208390 | -0.821565 | 3.772890e-53 | -8.615850e-47 |
| Msa0029020 | Msa0216810 | 0.829680 | 4.496242e-55 | -8.615850e-47 |
| Msa0029020 | Msa0227500 | -0.803665 | 3.127371e-49 | -8.615850e-47 |
| Msa0029020 | Msa0240780 | -0.809996 | 1.435161e-50 | -8.615850e-47 |
| Msa0029020 | Msa0241580 | -0.800887 | 1.167311e-48 | -8.615850e-47 |
| Msa0029020 | Msa0243910 | -0.813556 | 2.410988e-51 | -8.615850e-47 |
| Msa0029020 | Msa0251140 | -0.803054 | 4.185290e-49 | -8.615850e-47 |
| Msa0029020 | Msa0258670 | 0.810996 | 8.732081e-51 | -8.615850e-47 |
| Msa0029020 | Msa0264940 | 0.865907 | 4.200913e-65 | -8.615850e-47 |
| Msa0029020 | Msa0265930 | 0.818348 | 2.054038e-52 | -8.615850e-47 |
| Msa0029020 | Msa0265980 | 0.801892 | 7.265328e-49 | -8.615850e-47 |
| Msa0029020 | Msa0269360 | -0.830014 | 3.726758e-55 | -8.615850e-47 |
| Msa0029020 | Msa0272420 | -0.831252 | 1.854235e-55 | -8.615850e-47 |
| Msa0029020 | Msa0275670 | -0.810555 | 1.087626e-50 | -8.615850e-47 |
| Msa0029020 | Msa0286790 | -0.822273 | 2.586644e-53 | -8.615850e-47 |
| Msa0029020 | Msa0288270 | -0.810042 | 1.403420e-50 | -8.615850e-47 |
| Msa0029020 | Msa0291920 | 0.812254 | 4.650389e-51 | -8.615850e-47 |
| Msa0029020 | Msa0293480 | -0.811014 | 8.650181e-51 | -8.615850e-47 |
| Msa0029020 | Msa0298940 | -0.816334 | 5.834256e-52 | -8.615850e-47 |
| Msa0029020 | Msa0302990 | 0.866303 | 3.145768e-65 | -8.615850e-47 |
| Msa0029020 | Msa0303860 | 0.825828 | 3.788198e-54 | -8.615850e-47 |
| Msa0029020 | Msa0304740 | -0.818745 | 1.669720e-52 | -8.615850e-47 |
| Msa0029020 | Msa0312570 | -0.803301 | 3.720714e-49 | -8.615850e-47 |
| Msa0029020 | Msa0312780 | -0.802797 | 4.731343e-49 | -8.615850e-47 |
| Msa0029020 | Msa0320540 | -0.809973 | 1.452294e-50 | -8.615850e-47 |
| Msa0029020 | Msa0325470 | -0.805192 | 1.503100e-49 | -8.615850e-47 |
| Msa0029020 | Msa0329890 | 0.812457 | 4.199967e-51 | -8.615850e-47 |
| Msa0029020 | Msa0331590 | -0.821736 | 3.445938e-53 | -8.615850e-47 |
| Msa0029020 | Msa0335890 | 0.837558 | 4.843730e-57 | -8.615850e-47 |
| Msa0029020 | Msa0343200 | -0.807531 | 4.829032e-50 | -8.615850e-47 |
| Msa0029020 | Msa0350020 | -0.800352 | 1.500556e-48 | -8.615850e-47 |
| Msa0029020 | Msa0357100 | -0.824026 | 1.008731e-53 | -8.615850e-47 |
| Msa0029020 | Msa0365360 | -0.817514 | 3.170258e-52 | -8.615850e-47 |
| Msa0029020 | Msa0371610 | -0.804973 | 1.670230e-49 | -8.615850e-47 |
| Msa0029020 | Msa0381630 | 0.816467 | 5.448880e-52 | -8.615850e-47 |
| Msa0029020 | Msa0405250 | 0.846536 | 2.041962e-59 | -8.615850e-47 |
| Msa0029020 | Msa0413740 | -0.828125 | 1.069669e-54 | -8.615850e-47 |
| Msa0029020 | Msa0416800 | -0.824571 | 7.510538e-54 | -8.615850e-47 |
| Msa0029020 | Msa0418000 | -0.815880 | 7.367748e-52 | -8.615850e-47 |
| Msa0029020 | Msa0427090 | -0.805192 | 1.503317e-49 | -8.615850e-47 |
| Msa0029020 | Msa0431250 | -0.805490 | 1.301479e-49 | -8.615850e-47 |
| Msa0029020 | Msa0434890 | 0.829928 | 3.912456e-55 | -8.615850e-47 |
| Msa0029020 | Msa0436900 | -0.808942 | 2.416803e-50 | -8.615850e-47 |
| Msa0029020 | Msa0440110 | -0.816149 | 6.416281e-52 | -8.615850e-47 |
| Msa0029020 | Msa0441780 | 0.819004 | 1.457794e-52 | -8.615850e-47 |
| Msa0029020 | Msa0452680 | -0.803318 | 3.690491e-49 | -8.615850e-47 |
| Msa0029020 | Msa0453940 | 0.824716 | 6.941709e-54 | -8.615850e-47 |
| Msa0029020 | Msa0457370 | -0.844075 | 9.463746e-59 | -8.615850e-47 |
| Msa0029020 | Msa0458790 | -0.830117 | 3.518111e-55 | -8.615850e-47 |
| Msa0029020 | Msa0463460 | -0.809317 | 2.008999e-50 | -8.615850e-47 |
| Msa0029020 | Msa0468050 | 0.800439 | 1.440669e-48 | -8.615850e-47 |
| Msa0029020 | Msa0504630 | -0.829430 | 5.169533e-55 | -8.615850e-47 |
| Msa0029020 | Msa0505390 | -0.831569 | 1.549455e-55 | -8.615850e-47 |
| Msa0029020 | Msa0509020 | -0.805818 | 1.111163e-49 | -8.615850e-47 |
| Msa0029020 | Msa0517300 | -0.804161 | 2.466907e-49 | -8.615850e-47 |
| Msa0029020 | Msa0524050 | -0.831070 | 2.055765e-55 | -8.615850e-47 |
| Msa0029020 | Msa0525240 | -0.803574 | 3.266374e-49 | -8.615850e-47 |
| Msa0029020 | Msa0535020 | -0.836889 | 7.181388e-57 | -8.615850e-47 |
| Msa0029020 | Msa0535050 | -0.841705 | 4.040354e-58 | -8.615850e-47 |
| Msa0029020 | Msa0555980 | -0.801573 | 8.447307e-49 | -8.615850e-47 |
| Msa0029020 | Msa0557680 | -0.824040 | 1.000853e-53 | -8.615850e-47 |
| Msa0029020 | Msa0569290 | -0.816968 | 4.205848e-52 | -8.615850e-47 |
| Msa0029020 | Msa0575250 | -0.833313 | 5.729374e-56 | -8.615850e-47 |
| Msa0029020 | Msa0576400 | 0.801802 | 7.583629e-49 | -8.615850e-47 |
| Msa0029020 | Msa0576420 | -0.802250 | 6.133454e-49 | -8.615850e-47 |
| Msa0029020 | Msa0589600 | -0.807455 | 5.011942e-50 | -8.615850e-47 |
| Msa0029020 | Msa0591780 | -0.856025 | 4.251372e-62 | -8.615850e-47 |
| Msa0029020 | Msa0599250 | -0.817955 | 2.521623e-52 | -8.615850e-47 |
| Msa0029020 | Msa0607440 | -0.813792 | 2.138964e-51 | -8.615850e-47 |
| Msa0029020 | Msa0660880 | 0.806726 | 7.151447e-50 | -8.615850e-47 |
| Msa0029020 | Msa0668090 | -0.812309 | 4.522905e-51 | -8.615850e-47 |
| Msa0029020 | Msa0678240 | -0.829170 | 5.980113e-55 | -8.615850e-47 |
| Msa0029020 | Msa0688550 | -0.806581 | 7.673175e-50 | -8.615850e-47 |
| Msa0029020 | Msa0694690 | 0.823067 | 1.690437e-53 | -8.615850e-47 |
| Msa0029020 | Msa0695410 | -0.804659 | 1.942935e-49 | -8.615850e-47 |
| Msa0029020 | Msa0701840 | 0.801405 | 9.146065e-49 | -8.615850e-47 |
| Msa0029020 | Msa0707040 | -0.814372 | 1.593113e-51 | -8.615850e-47 |
| Msa0029020 | Msa0709820 | 0.820707 | 5.950892e-53 | -8.615850e-47 |
| Msa0029020 | Msa0714600 | -0.807301 | 5.404298e-50 | -8.615850e-47 |
| Msa0029020 | Msa0715310 | -0.822140 | 2.777308e-53 | -8.615850e-47 |
| Msa0029020 | Msa0719490 | 0.815770 | 7.796607e-52 | -8.615850e-47 |
| Msa0029020 | Msa0722930 | -0.823831 | 1.120870e-53 | -8.615850e-47 |
| Msa0029020 | Msa0723140 | -0.823426 | 1.393749e-53 | -8.615850e-47 |
| Msa0029020 | Msa0725480 | 0.835085 | 2.059936e-56 | -8.615850e-47 |
| Msa0029020 | Msa0743630 | -0.803397 | 3.555142e-49 | -8.615850e-47 |
| Msa0029020 | Msa0744500 | -0.803228 | 3.853277e-49 | -8.615850e-47 |
| Msa0029020 | Msa0747500 | 0.836000 | 1.209102e-56 | -8.615850e-47 |
| Msa0029020 | Msa0748610 | -0.804755 | 1.855283e-49 | -8.615850e-47 |
| Msa0029020 | Msa0749550 | -0.808047 | 3.751806e-50 | -8.615850e-47 |
| Msa0029020 | Msa0749900 | -0.800502 | 1.398729e-48 | -8.615850e-47 |
| Msa0029020 | Msa0756480 | -0.820880 | 5.427525e-53 | -8.615850e-47 |
| Msa0029020 | Msa0757310 | -0.807736 | 4.369998e-50 | -8.615850e-47 |
| Msa0029020 | Msa0766100 | 0.830620 | 2.649826e-55 | -8.615850e-47 |
| Msa0029020 | Msa0792170 | -0.828437 | 8.992813e-55 | -8.615850e-47 |
| Msa0029020 | Msa0792510 | -0.838897 | 2.188544e-57 | -8.615850e-47 |
| Msa0029020 | Msa0797220 | -0.803963 | 2.712746e-49 | -8.615850e-47 |
| Msa0029020 | Msa0814780 | -0.807502 | 4.899406e-50 | -8.615850e-47 |
| Msa0029020 | Msa0826650 | -0.803208 | 3.889741e-49 | -8.615850e-47 |
| Msa0029020 | Msa0829430 | -0.805757 | 1.143928e-49 | -8.615850e-47 |
| Msa0029020 | Msa0830120 | -0.819672 | 1.027048e-52 | -8.615850e-47 |
| Msa0029020 | Msa0830450 | -0.818248 | 2.164815e-52 | -8.615850e-47 |
| Msa0029020 | Msa0835510 | -0.830593 | 2.691189e-55 | -8.615850e-47 |
| Msa0029020 | Msa0836510 | -0.801479 | 8.832044e-49 | -8.615850e-47 |
| Msa0029020 | Msa0836680 | -0.822317 | 2.527336e-53 | -8.615850e-47 |
| Msa0029020 | Msa0837990 | -0.838189 | 3.334025e-57 | -8.615850e-47 |
| Msa0029020 | Msa0840630 | -0.801057 | 1.077583e-48 | -8.615850e-47 |
| Msa0029020 | Msa0842050 | -0.816662 | 4.926657e-52 | -8.615850e-47 |
| Msa0029020 | Msa0846640 | -0.802673 | 5.017630e-49 | -8.615850e-47 |
| Msa0029020 | Msa0847200 | -0.806859 | 6.702465e-50 | -8.615850e-47 |
| Msa0029020 | Msa0847390 | -0.807377 | 5.206925e-50 | -8.615850e-47 |
| Msa0029020 | Msa0880080 | -0.820267 | 7.508729e-53 | -8.615850e-47 |
| Msa0029020 | Msa0882880 | 0.816604 | 5.076445e-52 | -8.615850e-47 |
| Msa0029020 | Msa0883660 | -0.804148 | 2.482342e-49 | -8.615850e-47 |
| Msa0029020 | Msa0887000 | -0.841892 | 3.605830e-58 | -8.615850e-47 |
| Msa0029020 | Msa0896990 | 0.825583 | 4.331260e-54 | -8.615850e-47 |
| Msa0029020 | Msa0902980 | -0.817805 | 2.725681e-52 | -8.615850e-47 |
| Msa0029020 | Msa0910250 | 0.812859 | 3.430113e-51 | -8.615850e-47 |
| Msa0029020 | Msa0921630 | -0.815503 | 8.943889e-52 | -8.615850e-47 |
| Msa0029020 | Msa0929400 | -0.835966 | 1.233457e-56 | -8.615850e-47 |
| Msa0029020 | Msa0946120 | -0.818381 | 2.019055e-52 | -8.615850e-47 |
| Msa0029020 | Msa0948050 | 0.855383 | 6.546030e-62 | -8.615850e-47 |
| Msa0029020 | Msa0951720 | -0.848635 | 5.405685e-60 | -8.615850e-47 |
| Msa0029020 | Msa0968320 | 0.814313 | 1.641834e-51 | -8.615850e-47 |
| Msa0029020 | Msa0984460 | 0.855919 | 4.565397e-62 | -8.615850e-47 |
| Msa0029020 | Msa0988500 | -0.822782 | 1.969754e-53 | -8.615850e-47 |
| Msa0029020 | Msa0988510 | -0.810448 | 1.146899e-50 | -8.615850e-47 |
| Msa0029020 | Msa0989490 | 0.828685 | 7.837443e-55 | -8.615850e-47 |
| Msa0029020 | Msa0996940 | 0.813120 | 3.005999e-51 | -8.615850e-47 |
| Msa0029020 | Msa1004260 | -0.823306 | 1.487435e-53 | -8.615850e-47 |
| Msa0029020 | Msa1008340 | -0.801994 | 6.924422e-49 | -8.615850e-47 |
| Msa0029020 | Msa1008490 | -0.804076 | 2.569445e-49 | -8.615850e-47 |
| Msa0029020 | Msa1018020 | 0.817475 | 3.234086e-52 | -8.615850e-47 |
| Msa0029020 | Msa1018720 | -0.839337 | 1.682747e-57 | -8.615850e-47 |
| Msa0029020 | Msa1024140 | -0.820472 | 6.736438e-53 | -8.615850e-47 |
| Msa0029020 | Msa1032350 | -0.802391 | 5.737885e-49 | -8.615850e-47 |
| Msa0029020 | Msa1033440 | 0.817559 | 3.097573e-52 | -8.615850e-47 |
| Msa0029020 | Msa1036350 | -0.805302 | 1.425445e-49 | -8.615850e-47 |
| Msa0029020 | Msa1036390 | -0.825409 | 4.761956e-54 | -8.615850e-47 |
| Msa0029020 | Msa1042890 | 0.803935 | 2.748959e-49 | -8.615850e-47 |
| Msa0029020 | Msa1046610 | -0.804722 | 1.884512e-49 | -8.615850e-47 |
| Msa0029020 | Msa1049950 | -0.814995 | 1.159572e-51 | -8.615850e-47 |
| Msa0029020 | Msa1064210 | -0.808600 | 2.859904e-50 | -8.615850e-47 |
| Msa0029020 | Msa1064420 | -0.812438 | 4.238891e-51 | -8.615850e-47 |
| Msa0029020 | Msa1072350 | -0.804697 | 1.907396e-49 | -8.615850e-47 |
| Msa0029020 | Msa1073110 | 0.814324 | 1.632392e-51 | -8.615850e-47 |
| Msa0029020 | Msa1076630 | -0.818805 | 1.618509e-52 | -8.615850e-47 |
| Msa0029020 | Msa1076680 | -0.833053 | 6.648943e-56 | -8.615850e-47 |
| Msa0029020 | Msa1081600 | -0.817221 | 3.691024e-52 | -8.615850e-47 |
| Msa0029020 | Msa1083410 | -0.816006 | 6.908171e-52 | -8.615850e-47 |
| Msa0029020 | Msa1102170 | -0.810650 | 1.037478e-50 | -8.615850e-47 |
| Msa0029020 | Msa1107650 | -0.801953 | 7.060498e-49 | -8.615850e-47 |
| Msa0029020 | Msa1107970 | -0.811283 | 7.566726e-51 | -8.615850e-47 |
| Msa0029020 | Msa1109890 | 0.807461 | 4.997536e-50 | -8.615850e-47 |
| Msa0029020 | Msa1113210 | -0.819153 | 1.348607e-52 | -8.615850e-47 |
| Msa0029020 | Msa1117280 | -0.819207 | 1.310716e-52 | -8.615850e-47 |
| Msa0029020 | Msa1118140 | -0.806832 | 6.792539e-50 | -8.615850e-47 |
| Msa0029020 | Msa1120090 | 0.802584 | 5.235343e-49 | -8.615850e-47 |
| Msa0029020 | Msa1122660 | -0.820233 | 7.643937e-53 | -8.615850e-47 |
| Msa0029020 | Msa1125040 | -0.823652 | 1.234408e-53 | -8.615850e-47 |
| Msa0029020 | Msa1128160 | -0.826491 | 2.635449e-54 | -8.615850e-47 |
| Msa0029020 | Msa1133530 | -0.812921 | 3.323289e-51 | -8.615850e-47 |
| Msa0029020 | Msa1138480 | -0.808743 | 2.665925e-50 | -8.615850e-47 |
| Msa0029020 | Msa1139240 | -0.812064 | 5.115814e-51 | -8.615850e-47 |
| Msa0029020 | Msa1151960 | -0.837344 | 5.493814e-57 | -8.615850e-47 |
| Msa0029020 | Msa1165360 | -0.827491 | 1.519561e-54 | -8.615850e-47 |
| Msa0029020 | Msa1166370 | -0.820573 | 6.386048e-53 | -8.615850e-47 |
| Msa0029020 | Msa1170040 | 0.802723 | 4.898955e-49 | -8.615850e-47 |
| Msa0029020 | Msa1182830 | -0.819130 | 1.364762e-52 | -8.615850e-47 |
| Msa0029020 | Msa1186210 | -0.814616 | 1.406834e-51 | -8.615850e-47 |
| Msa0029020 | Msa1201990 | -0.816997 | 4.144704e-52 | -8.615850e-47 |
| Msa0029020 | Msa1207480 | 0.813960 | 1.964826e-51 | -8.615850e-47 |
| Msa0029020 | Msa1211370 | -0.818769 | 1.649106e-52 | -8.615850e-47 |
| Msa0029020 | Msa1212740 | -0.825065 | 5.742367e-54 | -8.615850e-47 |
| Msa0029020 | Msa1214900 | -0.804622 | 1.977222e-49 | -8.615850e-47 |
| Msa0029020 | Msa1220710 | -0.813330 | 2.702704e-51 | -8.615850e-47 |
| Msa0029020 | Msa1221200 | 0.816717 | 4.787980e-52 | -8.615850e-47 |
| Msa0029020 | Msa1221570 | 0.823870 | 1.097498e-53 | -8.615850e-47 |
| Msa0029020 | Msa1222030 | 0.816683 | 4.872775e-52 | -8.615850e-47 |
| Msa0029020 | Msa1223460 | -0.808918 | 2.446211e-50 | -8.615850e-47 |
| Msa0029020 | Msa1226600 | -0.809250 | 2.075804e-50 | -8.615850e-47 |
| Msa0029020 | Msa1238480 | -0.848787 | 4.907033e-60 | -8.615850e-47 |
| Msa0029020 | Msa1249370 | 0.813429 | 2.571451e-51 | -8.615850e-47 |
| Msa0029020 | Msa1254770 | -0.819232 | 1.294183e-52 | -8.615850e-47 |
| Msa0029020 | Msa1254800 | -0.820985 | 5.135937e-53 | -8.615850e-47 |
| Msa0029020 | Msa1258280 | -0.819585 | 1.075002e-52 | -8.615850e-47 |
| Msa0029020 | Msa1265660 | -0.808734 | 2.677118e-50 | -8.615850e-47 |
| Msa0029020 | Msa1265820 | 0.813599 | 2.359326e-51 | -8.615850e-47 |
| Msa0029020 | Msa1287090 | 0.805196 | 1.500342e-49 | -8.615850e-47 |
| Msa0029020 | Msa1295010 | -0.805802 | 1.119667e-49 | -8.615850e-47 |
| Msa0029020 | Msa1298290 | -0.801890 | 7.274173e-49 | -8.615850e-47 |
| Msa0029020 | Msa1303570 | -0.813758 | 2.176887e-51 | -8.615850e-47 |
| Msa0029020 | Msa1303640 | -0.808902 | 2.464531e-50 | -8.615850e-47 |
| Msa0029020 | Msa1304850 | -0.819038 | 1.432308e-52 | -8.615850e-47 |
| Msa0029020 | Msa1319440 | -0.808016 | 3.810152e-50 | -8.615850e-47 |
| Msa0029020 | Msa1323160 | 0.801763 | 7.724458e-49 | -8.615850e-47 |
| Msa0029020 | Msa1326000 | -0.817787 | 2.751772e-52 | -8.615850e-47 |
| Msa0029020 | Msa1329990 | -0.816624 | 5.023414e-52 | -8.615850e-47 |
| Msa0029020 | Msa1351370 | -0.800349 | 1.502365e-48 | -8.615850e-47 |
| Msa0029020 | Msa1365120 | -0.835555 | 1.567234e-56 | -8.615850e-47 |
| Msa0029020 | Msa1371080 | 0.841197 | 5.497446e-58 | -8.615850e-47 |
| Msa0029020 | Msa1373950 | -0.849452 | 3.205046e-60 | -8.615850e-47 |
| Msa0029020 | Msa1385900 | -0.802169 | 6.373417e-49 | -8.615850e-47 |
| Msa0029020 | Msa1386020 | -0.831515 | 1.598383e-55 | -8.615850e-47 |
| Msa0029020 | Msa1397540 | -0.824294 | 8.725082e-54 | -8.615850e-47 |
| Msa0029020 | Msa1417840 | 0.801532 | 8.613277e-49 | -8.615850e-47 |
| Msa0029020 | Msa1418200 | -0.805800 | 1.120478e-49 | -8.615850e-47 |
| Msa0029020 | Msa1423080 | -0.814572 | 1.438827e-51 | -8.615850e-47 |
| Msa0029020 | Msa1428420 | -0.831696 | 1.442192e-55 | -8.615850e-47 |
| Msa0029020 | Msa1429830 | -0.808915 | 2.449446e-50 | -8.615850e-47 |
| Msa0029020 | Msa1431240 | -0.814677 | 1.363633e-51 | -8.615850e-47 |
| Msa0029020 | Msa1445430 | 0.820253 | 7.564408e-53 | -8.615850e-47 |
| Msa0029020 | Msa1447160 | 0.805414 | 1.350658e-49 | -8.615850e-47 |
| Msa0029020 | Msa1451780 | -0.802988 | 4.320349e-49 | -8.615850e-47 |
| Msa0029020 | Msa1454290 | 0.801584 | 8.405854e-49 | -8.615850e-47 |
| Msa0029020 | Msa1460310 | 0.866477 | 2.770559e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029020 | MtrunA17_Chr1g0185661 | 93.333 | 30 | 2 | 0 | 3 | 32 | 655 | 684 | 1.28e-11 | 61.2 |
| Msa0029020 | MtrunA17_Chr1g0185661 | 93.103 | 29 | 2 | 0 | 4 | 32 | 5 | 33 | 2.40e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCTCAACAATCTTTC+AGG | 0.152886 | 1_1:-54143559 | Msa0029020:CDS |
| ATCTCGGTGGCCAATTCCTC+TGG | 0.231618 | 1_1:-54143430 | Msa0029020:CDS |
| TGTAATGAAGTATTGAAAAT+TGG | 0.259063 | 1_1:+54143613 | None:intergenic |
| CGCAATCAACCCAGAGGAAT+TGG | 0.261348 | 1_1:+54143420 | None:intergenic |
| TTATCAATCCAATCCTCTAA+TGG | 0.328408 | 1_1:-54143206 | Msa0029020:CDS |
| GCTGGGAGAACTAGGGCTTT+TGG | 0.331746 | 1_1:+54143536 | None:intergenic |
| TCCTGGGTTGAAGCCATTAG+AGG | 0.369624 | 1_1:+54143193 | None:intergenic |
| ATCACCACAGCCGTCGGAAT+TGG | 0.371692 | 1_1:+54143334 | None:intergenic |
| CGGAATTGGCGAGGGAGCAT+TGG | 0.411697 | 1_1:+54143348 | None:intergenic |
| CAGGTGTTGTTGTTGCAGCC+AGG | 0.418057 | 1_1:+54143293 | None:intergenic |
| GGAATTGGCGAGGGAGCATT+GGG | 0.432376 | 1_1:+54143349 | None:intergenic |
| GCTGGTGGCGGTGTGGGTGA+TGG | 0.441452 | 1_1:+54143250 | None:intergenic |
| TGGGCTGAGCGACACCGTGC+AGG | 0.443405 | 1_1:+54143368 | None:intergenic |
| TGTGGGTGATGGAATTGTCC+GGG | 0.446715 | 1_1:+54143261 | None:intergenic |
| TTGTTGTTGCAGCCAGGCTT+TGG | 0.449409 | 1_1:+54143299 | None:intergenic |
| GGTTGAAGCCATTAGAGGAT+TGG | 0.451183 | 1_1:+54143198 | None:intergenic |
| GTGTGGGTGATGGAATTGTC+CGG | 0.454258 | 1_1:+54143260 | None:intergenic |
| CTCGCCAATTCCGACGGCTG+TGG | 0.458653 | 1_1:-54143338 | Msa0029020:CDS |
| GAAACTGCGACATTTCGTCC+TGG | 0.459544 | 1_1:+54143176 | None:intergenic |
| AGCAAGTTCACCGCTGGTGG+CGG | 0.469786 | 1_1:+54143238 | None:intergenic |
| TTCACCGCTGGTGGCGGTGT+GGG | 0.483515 | 1_1:+54143244 | None:intergenic |
| TGTTTCTCATCACCAAAGCC+TGG | 0.494972 | 1_1:-54143311 | Msa0029020:CDS |
| TCCTCTAATGGCTTCAACCC+AGG | 0.495018 | 1_1:-54143194 | Msa0029020:CDS |
| CTCAACGTCATCGTCGATCT+CGG | 0.497477 | 1_1:-54143446 | Msa0029020:CDS |
| AAACTGCGACATTTCGTCCT+GGG | 0.498880 | 1_1:+54143177 | None:intergenic |
| AAGTTGGTGCACATGAGAAT+AGG | 0.499306 | 1_1:+54143147 | None:intergenic |
| TCTCGGTGGCCAATTCCTCT+GGG | 0.509201 | 1_1:-54143429 | Msa0029020:CDS |
| ACACCGTGCAGGGCGGTATG+TGG | 0.520199 | 1_1:+54143379 | None:intergenic |
| GAAAGATTGTTGAGAGAAAG+TGG | 0.530349 | 1_1:+54143562 | None:intergenic |
| ATTGTCCGGGGTGACACCAC+AGG | 0.542125 | 1_1:+54143274 | None:intergenic |
| GGGCTGAGCGACACCGTGCA+GGG | 0.548753 | 1_1:+54143369 | None:intergenic |
| ATCTTCAGCAAGTTCACCGC+TGG | 0.549080 | 1_1:+54143232 | None:intergenic |
| GTATTGAAAATTGGAAGCCA+TGG | 0.560507 | 1_1:+54143622 | None:intergenic |
| TTCAGCAAGTTCACCGCTGG+TGG | 0.561694 | 1_1:+54143235 | None:intergenic |
| GTTCACCGCTGGTGGCGGTG+TGG | 0.562370 | 1_1:+54143243 | None:intergenic |
| AGATCGACGATGACGTTGAG+TGG | 0.568219 | 1_1:+54143449 | None:intergenic |
| TGCTCCCTCGCCAATTCCGA+CGG | 0.580900 | 1_1:-54143344 | Msa0029020:CDS |
| CACAGCCGTCGGAATTGGCG+AGG | 0.587987 | 1_1:+54143339 | None:intergenic |
| CCTCCACATACCGCCCTGCA+CGG | 0.588163 | 1_1:-54143382 | Msa0029020:CDS |
| ACAGCCGTCGGAATTGGCGA+GGG | 0.612804 | 1_1:+54143340 | None:intergenic |
| CAACACCTGTGGTGTCACCC+CGG | 0.614141 | 1_1:-54143279 | Msa0029020:CDS |
| CCGTGCAGGGCGGTATGTGG+AGG | 0.617989 | 1_1:+54143382 | None:intergenic |
| ATCACCCACACCGCCACCAG+CGG | 0.641652 | 1_1:-54143248 | Msa0029020:CDS |
| GATCGACGATGACGTTGAGT+GGG | 0.647965 | 1_1:+54143450 | None:intergenic |
| GAAACAATCACCACAGCCGT+CGG | 0.679467 | 1_1:+54143328 | None:intergenic |
| GTGGGTGATGGAATTGTCCG+GGG | 0.682973 | 1_1:+54143262 | None:intergenic |
| GGTATGTGGAGGAAATGTAG+TGG | 0.686881 | 1_1:+54143393 | None:intergenic |
| GGCTGCAACAACAACACCTG+TGG | 0.687479 | 1_1:-54143290 | Msa0029020:CDS |
| AACGTCATCGTCGATCTCGG+TGG | 0.719707 | 1_1:-54143443 | Msa0029020:CDS |
| CTGAGCGACACCGTGCAGGG+CGG | 0.729304 | 1_1:+54143372 | None:intergenic |
| AAAGATTGTTGAGAGAAAGT+GGG | 0.736615 | 1_1:+54143563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAATGAAGTATTGAAAAT+TGG | + | chr1_1:54143148-54143167 | None:intergenic | 20.0% |
| ! | AATGAAGAAAAATAGGAGTA+GGG | + | chr1_1:54143172-54143191 | None:intergenic | 25.0% |
| ! | AAATGAAGAAAAATAGGAGT+AGG | + | chr1_1:54143173-54143192 | None:intergenic | 25.0% |
| TGGGTGAAATGAAGAAAAAT+AGG | + | chr1_1:54143179-54143198 | None:intergenic | 30.0% | |
| AAAGATTGTTGAGAGAAAGT+GGG | + | chr1_1:54143198-54143217 | None:intergenic | 30.0% | |
| TTATCAATCCAATCCTCTAA+TGG | - | chr1_1:54143552-54143571 | Msa0029020:CDS | 30.0% | |
| GAAAGATTGTTGAGAGAAAG+TGG | + | chr1_1:54143199-54143218 | None:intergenic | 35.0% | |
| CTTTCTCTCAACAATCTTTC+AGG | - | chr1_1:54143199-54143218 | Msa0029020:CDS | 35.0% | |
| !! | GGTTGATTTGAGCTTTGTAT+TGG | + | chr1_1:54143272-54143291 | None:intergenic | 35.0% |
| !! | AAGTTGGTGCACATGAGAAT+AGG | + | chr1_1:54143614-54143633 | None:intergenic | 40.0% |
| ! | TTTTGTGGCTGGGAGAACTA+GGG | + | chr1_1:54143232-54143251 | None:intergenic | 45.0% |
| ! | TGTTGTAGCGCCATCTTTTG+TGG | + | chr1_1:54143247-54143266 | None:intergenic | 45.0% |
| GGTATGTGGAGGAAATGTAG+TGG | + | chr1_1:54143368-54143387 | None:intergenic | 45.0% | |
| TGTTTCTCATCACCAAAGCC+TGG | - | chr1_1:54143447-54143466 | Msa0029020:CDS | 45.0% | |
| GGTTGAAGCCATTAGAGGAT+TGG | + | chr1_1:54143563-54143582 | None:intergenic | 45.0% | |
| AAACTGCGACATTTCGTCCT+GGG | + | chr1_1:54143584-54143603 | None:intergenic | 45.0% | |
| ! | CTTTTGTGGCTGGGAGAACT+AGG | + | chr1_1:54143233-54143252 | None:intergenic | 50.0% |
| GTTCTCCCAGCCACAAAAGA+TGG | - | chr1_1:54143234-54143253 | Msa0029020:CDS | 50.0% | |
| ! | TAGCGCCATCTTTTGTGGCT+GGG | + | chr1_1:54143242-54143261 | None:intergenic | 50.0% |
| ! | GTGGGACTAGTGGAGTTCTT+TGG | + | chr1_1:54143293-54143312 | None:intergenic | 50.0% |
| ATGACGTTGAGTGGGACTAG+TGG | + | chr1_1:54143303-54143322 | None:intergenic | 50.0% | |
| GATCGACGATGACGTTGAGT+GGG | + | chr1_1:54143311-54143330 | None:intergenic | 50.0% | |
| AGATCGACGATGACGTTGAG+TGG | + | chr1_1:54143312-54143331 | None:intergenic | 50.0% | |
| CTCAACGTCATCGTCGATCT+CGG | - | chr1_1:54143312-54143331 | Msa0029020:CDS | 50.0% | |
| CGCAATCAACCCAGAGGAAT+TGG | + | chr1_1:54143341-54143360 | None:intergenic | 50.0% | |
| ! | GGTTTTCGCAATCAACCCAG+AGG | + | chr1_1:54143347-54143366 | None:intergenic | 50.0% |
| GAAACAATCACCACAGCCGT+CGG | + | chr1_1:54143433-54143452 | None:intergenic | 50.0% | |
| ! | TTGTTGTTGCAGCCAGGCTT+TGG | + | chr1_1:54143462-54143481 | None:intergenic | 50.0% |
| !! | TGTGGGTGATGGAATTGTCC+GGG | + | chr1_1:54143500-54143519 | None:intergenic | 50.0% |
| !! | GTGTGGGTGATGGAATTGTC+CGG | + | chr1_1:54143501-54143520 | None:intergenic | 50.0% |
| ATCTTCAGCAAGTTCACCGC+TGG | + | chr1_1:54143529-54143548 | None:intergenic | 50.0% | |
| TCCTCTAATGGCTTCAACCC+AGG | - | chr1_1:54143564-54143583 | Msa0029020:CDS | 50.0% | |
| ! | TCCTGGGTTGAAGCCATTAG+AGG | + | chr1_1:54143568-54143587 | None:intergenic | 50.0% |
| GAAACTGCGACATTTCGTCC+TGG | + | chr1_1:54143585-54143604 | None:intergenic | 50.0% | |
| ! | GCTGGGAGAACTAGGGCTTT+TGG | + | chr1_1:54143225-54143244 | None:intergenic | 55.0% |
| ! | GTAGCGCCATCTTTTGTGGC+TGG | + | chr1_1:54143243-54143262 | None:intergenic | 55.0% |
| AACGTCATCGTCGATCTCGG+TGG | - | chr1_1:54143315-54143334 | Msa0029020:CDS | 55.0% | |
| ATCTCGGTGGCCAATTCCTC+TGG | - | chr1_1:54143328-54143347 | Msa0029020:CDS | 55.0% | |
| TCTCGGTGGCCAATTCCTCT+GGG | - | chr1_1:54143329-54143348 | Msa0029020:CDS | 55.0% | |
| !! | GGAATTGGCGAGGGAGCATT+GGG | + | chr1_1:54143412-54143431 | None:intergenic | 55.0% |
| ATCACCACAGCCGTCGGAAT+TGG | + | chr1_1:54143427-54143446 | None:intergenic | 55.0% | |
| !! | CAGGTGTTGTTGTTGCAGCC+AGG | + | chr1_1:54143468-54143487 | None:intergenic | 55.0% |
| GGCTGCAACAACAACACCTG+TGG | - | chr1_1:54143468-54143487 | Msa0029020:intron | 55.0% | |
| !! | GTGGGTGATGGAATTGTCCG+GGG | + | chr1_1:54143499-54143518 | None:intergenic | 55.0% |
| TTCAGCAAGTTCACCGCTGG+TGG | + | chr1_1:54143526-54143545 | None:intergenic | 55.0% | |
| ! | CGGAATTGGCGAGGGAGCAT+TGG | + | chr1_1:54143413-54143432 | None:intergenic | 60.0% |
| TGCTCCCTCGCCAATTCCGA+CGG | - | chr1_1:54143414-54143433 | Msa0029020:CDS | 60.0% | |
| ACAGCCGTCGGAATTGGCGA+GGG | + | chr1_1:54143421-54143440 | None:intergenic | 60.0% | |
| !! | CAACACCTGTGGTGTCACCC+CGG | - | chr1_1:54143479-54143498 | Msa0029020:intron | 60.0% |
| ATTGTCCGGGGTGACACCAC+AGG | + | chr1_1:54143487-54143506 | None:intergenic | 60.0% | |
| AGCAAGTTCACCGCTGGTGG+CGG | + | chr1_1:54143523-54143542 | None:intergenic | 60.0% | |
| CCTCCACATACCGCCCTGCA+CGG | - | chr1_1:54143376-54143395 | Msa0029020:CDS | 65.0% | |
| ACACCGTGCAGGGCGGTATG+TGG | + | chr1_1:54143382-54143401 | None:intergenic | 65.0% | |
| CACAGCCGTCGGAATTGGCG+AGG | + | chr1_1:54143422-54143441 | None:intergenic | 65.0% | |
| CTCGCCAATTCCGACGGCTG+TGG | - | chr1_1:54143420-54143439 | Msa0029020:CDS | 65.0% | |
| ATCACCCACACCGCCACCAG+CGG | - | chr1_1:54143510-54143529 | Msa0029020:intron | 65.0% | |
| !! | TTCACCGCTGGTGGCGGTGT+GGG | + | chr1_1:54143517-54143536 | None:intergenic | 65.0% |
| CCGTGCAGGGCGGTATGTGG+AGG | + | chr1_1:54143379-54143398 | None:intergenic | 70.0% | |
| CTGAGCGACACCGTGCAGGG+CGG | + | chr1_1:54143389-54143408 | None:intergenic | 70.0% | |
| GGGCTGAGCGACACCGTGCA+GGG | + | chr1_1:54143392-54143411 | None:intergenic | 70.0% | |
| TGGGCTGAGCGACACCGTGC+AGG | + | chr1_1:54143393-54143412 | None:intergenic | 70.0% | |
| !! | GCTGGTGGCGGTGTGGGTGA+TGG | + | chr1_1:54143511-54143530 | None:intergenic | 70.0% |
| !! | GTTCACCGCTGGTGGCGGTG+TGG | + | chr1_1:54143518-54143537 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 54143138 | 54143642 | 54143138 | ID=Msa0029020;Name=Msa0029020 |
| chr1_1 | mRNA | 54143138 | 54143642 | 54143138 | ID=Msa0029020-mRNA-1;Parent=Msa0029020;Name=Msa0029020-mRNA-1;_AED=0.42;_eAED=0.87;_QI=0|0|0|1|0|0|2|0|143 |
| chr1_1 | exon | 54143547 | 54143642 | 54143547 | ID=Msa0029020-mRNA-1:exon:16052;Parent=Msa0029020-mRNA-1 |
| chr1_1 | exon | 54143138 | 54143473 | 54143138 | ID=Msa0029020-mRNA-1:exon:16051;Parent=Msa0029020-mRNA-1 |
| chr1_1 | CDS | 54143547 | 54143642 | 54143547 | ID=Msa0029020-mRNA-1:cds;Parent=Msa0029020-mRNA-1 |
| chr1_1 | CDS | 54143138 | 54143473 | 54143138 | ID=Msa0029020-mRNA-1:cds;Parent=Msa0029020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
