Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575540 | XP_003631072.1 | 97.003 | 634 | 14 | 2 | 1 | 634 | 1 | 629 | 0.0 | 1278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575540 | sp|Q9C9U3|DOX2_ARATH | 69.401 | 634 | 188 | 3 | 1 | 634 | 1 | 628 | 0.0 | 949 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575540 | G7LD99 | 97.003 | 634 | 14 | 2 | 1 | 634 | 1 | 629 | 0.0 | 1278 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008330 | Msa0575540 | 0.803058 | 4.178867e-49 | -8.615850e-47 |
| Msa0014790 | Msa0575540 | 0.829273 | 5.645070e-55 | -8.615850e-47 |
| Msa0017420 | Msa0575540 | 0.825703 | 4.056610e-54 | -8.615850e-47 |
| Msa0021980 | Msa0575540 | 0.873656 | 1.241985e-67 | -8.615850e-47 |
| Msa0025690 | Msa0575540 | 0.809532 | 1.806503e-50 | -8.615850e-47 |
| Msa0026120 | Msa0575540 | 0.820178 | 7.867248e-53 | -8.615850e-47 |
| Msa0036150 | Msa0575540 | 0.805637 | 1.212418e-49 | -8.615850e-47 |
| Msa0046670 | Msa0575540 | 0.807224 | 5.610123e-50 | -8.615850e-47 |
| Msa0047230 | Msa0575540 | 0.815238 | 1.024256e-51 | -8.615850e-47 |
| Msa0050320 | Msa0575540 | 0.822808 | 1.943109e-53 | -8.615850e-47 |
| Msa0053480 | Msa0575540 | 0.871338 | 7.373874e-67 | -8.615850e-47 |
| Msa0053960 | Msa0575540 | 0.801237 | 9.899702e-49 | -8.615850e-47 |
| Msa0055650 | Msa0575540 | 0.821956 | 3.064923e-53 | -8.615850e-47 |
| Msa0059880 | Msa0575540 | -0.801058 | 1.076921e-48 | -8.615850e-47 |
| Msa0060740 | Msa0575540 | 0.803313 | 3.700456e-49 | -8.615850e-47 |
| Msa0067580 | Msa0575540 | 0.823228 | 1.551059e-53 | -8.615850e-47 |
| Msa0070090 | Msa0575540 | 0.867757 | 1.081321e-65 | -8.615850e-47 |
| Msa0083550 | Msa0575540 | 0.807588 | 4.698468e-50 | -8.615850e-47 |
| Msa0089530 | Msa0575540 | 0.800893 | 1.164071e-48 | -8.615850e-47 |
| Msa0090350 | Msa0575540 | 0.838204 | 3.305092e-57 | -8.615850e-47 |
| Msa0094840 | Msa0575540 | 0.805966 | 1.034026e-49 | -8.615850e-47 |
| Msa0099090 | Msa0575540 | 0.819094 | 1.390693e-52 | -8.615850e-47 |
| Msa0099580 | Msa0575540 | 0.800418 | 1.454455e-48 | -8.615850e-47 |
| Msa0112800 | Msa0575540 | 0.809086 | 2.250725e-50 | -8.615850e-47 |
| Msa0117300 | Msa0575540 | 0.859720 | 3.402524e-63 | -8.615850e-47 |
| Msa0121460 | Msa0575540 | 0.802291 | 6.015602e-49 | -8.615850e-47 |
| Msa0130100 | Msa0575540 | 0.805364 | 1.383408e-49 | -8.615850e-47 |
| Msa0137810 | Msa0575540 | 0.816002 | 6.921289e-52 | -8.615850e-47 |
| Msa0143280 | Msa0575540 | 0.818271 | 2.138583e-52 | -8.615850e-47 |
| Msa0148430 | Msa0575540 | 0.802983 | 4.330137e-49 | -8.615850e-47 |
| Msa0151810 | Msa0575540 | 0.816541 | 5.244710e-52 | -8.615850e-47 |
| Msa0154720 | Msa0575540 | 0.821985 | 3.017491e-53 | -8.615850e-47 |
| Msa0155030 | Msa0575540 | 0.826661 | 2.400167e-54 | -8.615850e-47 |
| Msa0155500 | Msa0575540 | 0.807134 | 5.863926e-50 | -8.615850e-47 |
| Msa0160650 | Msa0575540 | 0.855677 | 5.372446e-62 | -8.615850e-47 |
| Msa0166580 | Msa0575540 | 0.813780 | 2.152527e-51 | -8.615850e-47 |
| Msa0184030 | Msa0575540 | 0.849791 | 2.577872e-60 | -8.615850e-47 |
| Msa0198140 | Msa0575540 | 0.802590 | 5.219766e-49 | -8.615850e-47 |
| Msa0212490 | Msa0575540 | -0.815901 | 7.290267e-52 | -8.615850e-47 |
| Msa0225370 | Msa0575540 | 0.854847 | 9.372874e-62 | -8.615850e-47 |
| Msa0226580 | Msa0575540 | 0.807624 | 4.616351e-50 | -8.615850e-47 |
| Msa0227800 | Msa0575540 | 0.827623 | 1.412268e-54 | -8.615850e-47 |
| Msa0365360 | Msa0575540 | 0.844088 | 9.388734e-59 | -8.615850e-47 |
| Msa0368790 | Msa0575540 | 0.810374 | 1.189826e-50 | -8.615850e-47 |
| Msa0379720 | Msa0575540 | 0.823443 | 1.381455e-53 | -8.615850e-47 |
| Msa0387170 | Msa0575540 | 0.802325 | 5.918634e-49 | -8.615850e-47 |
| Msa0389050 | Msa0575540 | 0.815532 | 8.808646e-52 | -8.615850e-47 |
| Msa0406690 | Msa0575540 | 0.815198 | 1.045125e-51 | -8.615850e-47 |
| Msa0408160 | Msa0575540 | 0.812391 | 4.340511e-51 | -8.615850e-47 |
| Msa0410960 | Msa0575540 | 0.805271 | 1.446810e-49 | -8.615850e-47 |
| Msa0411000 | Msa0575540 | 0.804485 | 2.112030e-49 | -8.615850e-47 |
| Msa0421390 | Msa0575540 | 0.871857 | 4.964261e-67 | -8.615850e-47 |
| Msa0429100 | Msa0575540 | 0.821861 | 3.223603e-53 | -8.615850e-47 |
| Msa0429130 | Msa0575540 | 0.826573 | 2.518865e-54 | -8.615850e-47 |
| Msa0431940 | Msa0575540 | 0.804906 | 1.724808e-49 | -8.615850e-47 |
| Msa0432260 | Msa0575540 | 0.800305 | 1.534066e-48 | -8.615850e-47 |
| Msa0439700 | Msa0575540 | 0.817516 | 3.166080e-52 | -8.615850e-47 |
| Msa0445830 | Msa0575540 | 0.829269 | 5.656711e-55 | -8.615850e-47 |
| Msa0451370 | Msa0575540 | 0.818252 | 2.159615e-52 | -8.615850e-47 |
| Msa0451760 | Msa0575540 | 0.802300 | 5.989213e-49 | -8.615850e-47 |
| Msa0452010 | Msa0575540 | 0.820769 | 5.756790e-53 | -8.615850e-47 |
| Msa0452680 | Msa0575540 | 0.823252 | 1.531025e-53 | -8.615850e-47 |
| Msa0455230 | Msa0575540 | 0.801468 | 8.875495e-49 | -8.615850e-47 |
| Msa0457370 | Msa0575540 | 0.816419 | 5.583612e-52 | -8.615850e-47 |
| Msa0241580 | Msa0575540 | 0.812243 | 4.677225e-51 | -8.615850e-47 |
| Msa0251140 | Msa0575540 | 0.823441 | 1.382756e-53 | -8.615850e-47 |
| Msa0252880 | Msa0575540 | -0.806966 | 6.361931e-50 | -8.615850e-47 |
| Msa0256410 | Msa0575540 | 0.816638 | 4.986920e-52 | -8.615850e-47 |
| Msa0264940 | Msa0575540 | -0.803956 | 2.721350e-49 | -8.615850e-47 |
| Msa0265620 | Msa0575540 | 0.810357 | 1.200039e-50 | -8.615850e-47 |
| Msa0266380 | Msa0575540 | 0.855432 | 6.336257e-62 | -8.615850e-47 |
| Msa0279490 | Msa0575540 | 0.817145 | 3.838965e-52 | -8.615850e-47 |
| Msa0302990 | Msa0575540 | -0.806909 | 6.541106e-50 | -8.615850e-47 |
| Msa0304990 | Msa0575540 | 0.825361 | 4.887811e-54 | -8.615850e-47 |
| Msa0305580 | Msa0575540 | 0.809389 | 1.938228e-50 | -8.615850e-47 |
| Msa0311330 | Msa0575540 | 0.819352 | 1.214836e-52 | -8.615850e-47 |
| Msa0329650 | Msa0575540 | -0.812293 | 4.560058e-51 | -8.615850e-47 |
| Msa0330770 | Msa0575540 | 0.809125 | 2.208387e-50 | -8.615850e-47 |
| Msa0334170 | Msa0575540 | 0.813034 | 3.139566e-51 | -8.615850e-47 |
| Msa0340530 | Msa0575540 | 0.815748 | 7.887902e-52 | -8.615850e-47 |
| Msa0341860 | Msa0575540 | 0.841472 | 4.653442e-58 | -8.615850e-47 |
| Msa0343200 | Msa0575540 | 0.863866 | 1.833021e-64 | -8.615850e-47 |
| Msa0359230 | Msa0575540 | 0.801100 | 1.056038e-48 | -8.615850e-47 |
| Msa0360130 | Msa0575540 | 0.810223 | 1.282676e-50 | -8.615850e-47 |
| Msa0363460 | Msa0575540 | 0.803786 | 2.951441e-49 | -8.615850e-47 |
| Msa0496460 | Msa0575540 | 0.812860 | 3.427983e-51 | -8.615850e-47 |
| Msa0496470 | Msa0575540 | 0.804036 | 2.619863e-49 | -8.615850e-47 |
| Msa0520810 | Msa0575540 | 0.818073 | 2.370748e-52 | -8.615850e-47 |
| Msa0521100 | Msa0575540 | 0.804911 | 1.720629e-49 | -8.615850e-47 |
| Msa0525940 | Msa0575540 | 0.814457 | 1.525741e-51 | -8.615850e-47 |
| Msa0535020 | Msa0575540 | 0.839136 | 1.898222e-57 | -8.615850e-47 |
| Msa0535050 | Msa0575540 | 0.838182 | 3.348072e-57 | -8.615850e-47 |
| Msa0540160 | Msa0575540 | 0.810215 | 1.287463e-50 | -8.615850e-47 |
| Msa0540840 | Msa0575540 | 0.801472 | 8.860341e-49 | -8.615850e-47 |
| Msa0544930 | Msa0575540 | 0.889167 | 3.085318e-73 | -8.615850e-47 |
| Msa0549550 | Msa0575540 | 0.807410 | 5.123864e-50 | -8.615850e-47 |
| Msa0555510 | Msa0575540 | 0.829766 | 4.283557e-55 | -8.615850e-47 |
| Msa0563140 | Msa0575540 | 0.807251 | 5.538748e-50 | -8.615850e-47 |
| Msa0566010 | Msa0575540 | 0.802257 | 6.113190e-49 | -8.615850e-47 |
| Msa0575540 | Msa0578890 | 0.845405 | 4.146364e-59 | -8.615850e-47 |
| Msa0575540 | Msa0580430 | 0.806268 | 8.933678e-50 | -8.615850e-47 |
| Msa0575540 | Msa0591780 | 0.807110 | 5.930951e-50 | -8.615850e-47 |
| Msa0575540 | Msa0597300 | 0.813391 | 2.620965e-51 | -8.615850e-47 |
| Msa0575540 | Msa0604130 | 0.815246 | 1.019833e-51 | -8.615850e-47 |
| Msa0575540 | Msa0604890 | 0.824396 | 8.258315e-54 | -8.615850e-47 |
| Msa0575540 | Msa0610850 | 0.858745 | 6.672397e-63 | -8.615850e-47 |
| Msa0575540 | Msa0617470 | 0.818908 | 1.533349e-52 | -8.615850e-47 |
| Msa0575540 | Msa0619670 | -0.800143 | 1.654974e-48 | -8.615850e-47 |
| Msa0575540 | Msa0629960 | 0.803015 | 4.264613e-49 | -8.615850e-47 |
| Msa0575540 | Msa0636750 | 0.827559 | 1.463579e-54 | -8.615850e-47 |
| Msa0575540 | Msa0636760 | 0.831903 | 1.282217e-55 | -8.615850e-47 |
| Msa0575540 | Msa0641020 | 0.860101 | 2.611638e-63 | -8.615850e-47 |
| Msa0575540 | Msa0641030 | 0.875571 | 2.774862e-68 | -8.615850e-47 |
| Msa0575540 | Msa0645460 | 0.837119 | 6.274380e-57 | -8.615850e-47 |
| Msa0575540 | Msa0646180 | 0.826521 | 2.592305e-54 | -8.615850e-47 |
| Msa0575540 | Msa0648170 | 0.821950 | 3.073724e-53 | -8.615850e-47 |
| Msa0575540 | Msa0648200 | 0.814717 | 1.336311e-51 | -8.615850e-47 |
| Msa0575540 | Msa0648300 | 0.837766 | 4.282790e-57 | -8.615850e-47 |
| Msa0575540 | Msa0649530 | 0.811340 | 7.352283e-51 | -8.615850e-47 |
| Msa0575540 | Msa0651340 | 0.852661 | 3.988368e-61 | -8.615850e-47 |
| Msa0575540 | Msa0657860 | 0.811797 | 5.850027e-51 | -8.615850e-47 |
| Msa0575540 | Msa0664110 | 0.813569 | 2.394974e-51 | -8.615850e-47 |
| Msa0575540 | Msa0664130 | 0.831113 | 2.006230e-55 | -8.615850e-47 |
| Msa0575540 | Msa0679560 | 0.865074 | 7.686876e-65 | -8.615850e-47 |
| Msa0575540 | Msa0684910 | 0.843591 | 1.275591e-58 | -8.615850e-47 |
| Msa0575540 | Msa0684920 | 0.832306 | 1.019339e-55 | -8.615850e-47 |
| Msa0575540 | Msa0685880 | 0.806601 | 7.598788e-50 | -8.615850e-47 |
| Msa0575540 | Msa0691140 | 0.860934 | 1.460907e-63 | -8.615850e-47 |
| Msa0575540 | Msa0691740 | 0.800896 | 1.162003e-48 | -8.615850e-47 |
| Msa0575540 | Msa0693560 | 0.827496 | 1.515182e-54 | -8.615850e-47 |
| Msa0575540 | Msa0700250 | 0.825991 | 3.465007e-54 | -8.615850e-47 |
| Msa0575540 | Msa0714930 | 0.837013 | 6.676915e-57 | -8.615850e-47 |
| Msa0575540 | Msa0729920 | 0.805527 | 1.278657e-49 | -8.615850e-47 |
| Msa0575540 | Msa0738600 | 0.800263 | 1.564733e-48 | -8.615850e-47 |
| Msa0575540 | Msa0739410 | 0.844001 | 9.903403e-59 | -8.615850e-47 |
| Msa0575540 | Msa0747660 | 0.809965 | 1.457380e-50 | -8.615850e-47 |
| Msa0575540 | Msa0753330 | 0.820260 | 7.534775e-53 | -8.615850e-47 |
| Msa0575540 | Msa0756940 | 0.854667 | 1.056878e-61 | -8.615850e-47 |
| Msa0575540 | Msa0759380 | 0.837362 | 5.436909e-57 | -8.615850e-47 |
| Msa0575540 | Msa0778580 | 0.819067 | 1.410653e-52 | -8.615850e-47 |
| Msa0575540 | Msa0795930 | 0.804751 | 1.858326e-49 | -8.615850e-47 |
| Msa0575540 | Msa0807980 | 0.820841 | 5.543272e-53 | -8.615850e-47 |
| Msa0575540 | Msa0815380 | 0.805643 | 1.209271e-49 | -8.615850e-47 |
| Msa0575540 | Msa0815950 | 0.806816 | 6.843743e-50 | -8.615850e-47 |
| Msa0575540 | Msa0818950 | 0.802905 | 4.493836e-49 | -8.615850e-47 |
| Msa0575540 | Msa0836510 | 0.858690 | 6.926638e-63 | -8.615850e-47 |
| Msa0575540 | Msa0883350 | 0.806778 | 6.972537e-50 | -8.615850e-47 |
| Msa0575540 | Msa0883390 | 0.820163 | 7.929435e-53 | -8.615850e-47 |
| Msa0575540 | Msa0883410 | 0.823428 | 1.392884e-53 | -8.615850e-47 |
| Msa0575540 | Msa0883430 | 0.820326 | 7.277722e-53 | -8.615850e-47 |
| Msa0575540 | Msa0883660 | 0.815132 | 1.081072e-51 | -8.615850e-47 |
| Msa0575540 | Msa0883670 | 0.815604 | 8.492200e-52 | -8.615850e-47 |
| Msa0575540 | Msa0883700 | 0.813555 | 2.412428e-51 | -8.615850e-47 |
| Msa0575540 | Msa0886660 | 0.803287 | 3.745575e-49 | -8.615850e-47 |
| Msa0575540 | Msa0887000 | 0.826639 | 2.428669e-54 | -8.615850e-47 |
| Msa0575540 | Msa0912230 | 0.810392 | 1.179099e-50 | -8.615850e-47 |
| Msa0575540 | Msa0912470 | 0.809495 | 1.839870e-50 | -8.615850e-47 |
| Msa0575540 | Msa0930090 | 0.945492 | 2.759067e-104 | -8.615850e-47 |
| Msa0575540 | Msa0951720 | 0.805173 | 1.516648e-49 | -8.615850e-47 |
| Msa0575540 | Msa0957800 | 0.811672 | 6.228252e-51 | -8.615850e-47 |
| Msa0575540 | Msa0984820 | 0.818001 | 2.461081e-52 | -8.615850e-47 |
| Msa0575540 | Msa0984830 | 0.820393 | 7.023274e-53 | -8.615850e-47 |
| Msa0575540 | Msa0984840 | 0.809786 | 1.592556e-50 | -8.615850e-47 |
| Msa0575540 | Msa0984850 | 0.810781 | 9.716207e-51 | -8.615850e-47 |
| Msa0575540 | Msa0984860 | 0.802415 | 5.672744e-49 | -8.615850e-47 |
| Msa0575540 | Msa0985040 | 0.828298 | 9.716626e-55 | -8.615850e-47 |
| Msa0575540 | Msa1008340 | 0.809547 | 1.793041e-50 | -8.615850e-47 |
| Msa0575540 | Msa1008960 | 0.825540 | 4.433636e-54 | -8.615850e-47 |
| Msa0575540 | Msa1009170 | 0.820061 | 8.367896e-53 | -8.615850e-47 |
| Msa0575540 | Msa1026720 | 0.825063 | 5.750763e-54 | -8.615850e-47 |
| Msa0575540 | Msa1031220 | 0.802305 | 5.974697e-49 | -8.615850e-47 |
| Msa0575540 | Msa1033670 | 0.809696 | 1.665563e-50 | -8.615850e-47 |
| Msa0575540 | Msa1036360 | 0.830383 | 3.029510e-55 | -8.615850e-47 |
| Msa0575540 | Msa1038820 | 0.815204 | 1.041871e-51 | -8.615850e-47 |
| Msa0575540 | Msa1038890 | 0.824180 | 9.282140e-54 | -8.615850e-47 |
| Msa0575540 | Msa1043540 | 0.800623 | 1.321240e-48 | -8.615850e-47 |
| Msa0575540 | Msa1044450 | 0.817288 | 3.564198e-52 | -8.615850e-47 |
| Msa0575540 | Msa1049950 | 0.807487 | 4.934017e-50 | -8.615850e-47 |
| Msa0575540 | Msa1050320 | 0.838734 | 2.411525e-57 | -8.615850e-47 |
| Msa0575540 | Msa1050540 | 0.805789 | 1.126665e-49 | -8.615850e-47 |
| Msa0575540 | Msa1052080 | 0.809767 | 1.607836e-50 | -8.615850e-47 |
| Msa0575540 | Msa1055710 | 0.848357 | 6.452379e-60 | -8.615850e-47 |
| Msa0575540 | Msa1064420 | 0.802154 | 6.419476e-49 | -8.615850e-47 |
| Msa0575540 | Msa1076640 | 0.829830 | 4.133900e-55 | -8.615850e-47 |
| Msa0575540 | Msa1081530 | 0.811061 | 8.450347e-51 | -8.615850e-47 |
| Msa0575540 | Msa1081710 | 0.808512 | 2.987030e-50 | -8.615850e-47 |
| Msa0575540 | Msa1107650 | 0.820250 | 7.574737e-53 | -8.615850e-47 |
| Msa0575540 | Msa1108780 | 0.822430 | 2.379593e-53 | -8.615850e-47 |
| Msa0575540 | Msa1113210 | 0.811464 | 6.909860e-51 | -8.615850e-47 |
| Msa0575540 | Msa1113280 | 0.813967 | 1.957026e-51 | -8.615850e-47 |
| Msa0575540 | Msa1125450 | 0.834286 | 3.271818e-56 | -8.615850e-47 |
| Msa0575540 | Msa1125530 | 0.837033 | 6.598459e-57 | -8.615850e-47 |
| Msa0575540 | Msa1128780 | 0.800036 | 1.740076e-48 | -8.615850e-47 |
| Msa0575540 | Msa1138490 | 0.807093 | 5.980886e-50 | -8.615850e-47 |
| Msa0575540 | Msa1139240 | 0.822111 | 2.821290e-53 | -8.615850e-47 |
| Msa0575540 | Msa1145930 | 0.805223 | 1.480452e-49 | -8.615850e-47 |
| Msa0575540 | Msa1164570 | 0.824977 | 6.025046e-54 | -8.615850e-47 |
| Msa0575540 | Msa1166170 | 0.845822 | 3.195656e-59 | -8.615850e-47 |
| Msa0575540 | Msa1166270 | 0.850290 | 1.868040e-60 | -8.615850e-47 |
| Msa0575540 | Msa1172070 | 0.812676 | 3.759925e-51 | -8.615850e-47 |
| Msa0575540 | Msa1182400 | 0.826582 | 2.507030e-54 | -8.615850e-47 |
| Msa0575540 | Msa1190460 | 0.837774 | 4.261706e-57 | -8.615850e-47 |
| Msa0575540 | Msa1191390 | 0.823700 | 1.202582e-53 | -8.615850e-47 |
| Msa0575540 | Msa1194170 | -0.828181 | 1.036656e-54 | -8.615850e-47 |
| Msa0575540 | Msa1199750 | 0.824036 | 1.003385e-53 | -8.615850e-47 |
| Msa0575540 | Msa1204390 | 0.828410 | 9.133349e-55 | -8.615850e-47 |
| Msa0575540 | Msa1204430 | 0.803380 | 3.583368e-49 | -8.615850e-47 |
| Msa0575540 | Msa1211280 | 0.844588 | 6.888047e-59 | -8.615850e-47 |
| Msa0575540 | Msa1211370 | 0.806863 | 6.689799e-50 | -8.615850e-47 |
| Msa0575540 | Msa1213460 | 0.804734 | 1.873589e-49 | -8.615850e-47 |
| Msa0575540 | Msa1216700 | 0.826314 | 2.903445e-54 | -8.615850e-47 |
| Msa0575540 | Msa1216900 | 0.833576 | 4.927375e-56 | -8.615850e-47 |
| Msa0575540 | Msa1223510 | 0.814939 | 1.192963e-51 | -8.615850e-47 |
| Msa0575540 | Msa1230190 | 0.834654 | 2.645673e-56 | -8.615850e-47 |
| Msa0575540 | Msa1232330 | 0.825041 | 5.818413e-54 | -8.615850e-47 |
| Msa0575540 | Msa1233740 | 0.800723 | 1.260562e-48 | -8.615850e-47 |
| Msa0575540 | Msa1244300 | 0.841604 | 4.297317e-58 | -8.615850e-47 |
| Msa0575540 | Msa1260510 | 0.803848 | 2.866183e-49 | -8.615850e-47 |
| Msa0575540 | Msa1261970 | -0.800982 | 1.116426e-48 | -8.615850e-47 |
| Msa0575540 | Msa1262740 | 0.802206 | 6.262698e-49 | -8.615850e-47 |
| Msa0575540 | Msa1272770 | 0.820912 | 5.338827e-53 | -8.615850e-47 |
| Msa0575540 | Msa1275340 | 0.822659 | 2.104188e-53 | -8.615850e-47 |
| Msa0575540 | Msa1279310 | 0.820774 | 5.741088e-53 | -8.615850e-47 |
| Msa0575540 | Msa1279870 | 0.800544 | 1.371333e-48 | -8.615850e-47 |
| Msa0575540 | Msa1287160 | 0.811393 | 7.161919e-51 | -8.615850e-47 |
| Msa0575540 | Msa1296610 | 0.839262 | 1.760256e-57 | -8.615850e-47 |
| Msa0575540 | Msa1299940 | 0.806222 | 9.133739e-50 | -8.615850e-47 |
| Msa0575540 | Msa1300360 | 0.803850 | 2.862729e-49 | -8.615850e-47 |
| Msa0575540 | Msa1307770 | 0.830758 | 2.451846e-55 | -8.615850e-47 |
| Msa0575540 | Msa1311550 | 0.815488 | 9.012475e-52 | -8.615850e-47 |
| Msa0575540 | Msa1317140 | 0.819933 | 8.950368e-53 | -8.615850e-47 |
| Msa0575540 | Msa1326900 | 0.805743 | 1.152139e-49 | -8.615850e-47 |
| Msa0575540 | Msa1328600 | 0.838997 | 2.061692e-57 | -8.615850e-47 |
| Msa0575540 | Msa1329020 | 0.837427 | 5.232865e-57 | -8.615850e-47 |
| Msa0575540 | Msa1329660 | 0.807767 | 4.304600e-50 | -8.615850e-47 |
| Msa0575540 | Msa1329820 | 0.820952 | 5.226717e-53 | -8.615850e-47 |
| Msa0575540 | Msa1330530 | 0.808569 | 2.903859e-50 | -8.615850e-47 |
| Msa0575540 | Msa1331730 | 0.803262 | 3.790464e-49 | -8.615850e-47 |
| Msa0575540 | Msa1339310 | 0.810085 | 1.373554e-50 | -8.615850e-47 |
| Msa0575540 | Msa1346920 | 0.842361 | 2.709602e-58 | -8.615850e-47 |
| Msa0575540 | Msa1352550 | 0.841688 | 4.083208e-58 | -8.615850e-47 |
| Msa0575540 | Msa1353760 | 0.825293 | 5.072951e-54 | -8.615850e-47 |
| Msa0575540 | Msa1357380 | 0.800997 | 1.108453e-48 | -8.615850e-47 |
| Msa0575540 | Msa1359880 | 0.825460 | 4.632530e-54 | -8.615850e-47 |
| Msa0575540 | Msa1363560 | 0.819073 | 1.406388e-52 | -8.615850e-47 |
| Msa0575540 | Msa1368660 | 0.804662 | 1.939407e-49 | -8.615850e-47 |
| Msa0575540 | Msa1381720 | 0.805885 | 1.075584e-49 | -8.615850e-47 |
| Msa0575540 | Msa1386250 | 0.818359 | 2.043124e-52 | -8.615850e-47 |
| Msa0575540 | Msa1391600 | 0.814057 | 1.870042e-51 | -8.615850e-47 |
| Msa0575540 | Msa1410180 | 0.828624 | 8.104798e-55 | -8.615850e-47 |
| Msa0575540 | Msa1413880 | 0.828082 | 1.095299e-54 | -8.615850e-47 |
| Msa0575540 | Msa1432250 | 0.833964 | 3.941131e-56 | -8.615850e-47 |
| Msa0575540 | Msa1433380 | 0.832189 | 1.089211e-55 | -8.615850e-47 |
| Msa0575540 | Msa1443440 | 0.826830 | 2.187087e-54 | -8.615850e-47 |
| Msa0575540 | Msa1445250 | 0.879285 | 1.411941e-69 | -8.615850e-47 |
| Msa0575540 | Msa1445700 | 0.847128 | 1.406374e-59 | -8.615850e-47 |
| Msa0575540 | Msa1446220 | 0.800690 | 1.280160e-48 | -8.615850e-47 |
| Msa0575540 | Msa1450850 | 0.829501 | 4.969717e-55 | -8.615850e-47 |
| Msa0575540 | Msa1454330 | 0.802626 | 5.131231e-49 | -8.615850e-47 |
| Msa0575540 | Msa1457070 | 0.932244 | 1.139412e-94 | -8.615850e-47 |
| Msa0575540 | Msa1457180 | 0.810059 | 1.391350e-50 | -8.615850e-47 |
| Msa0575540 | Msa1457450 | 0.848384 | 6.342240e-60 | -8.615850e-47 |
| Msa0575540 | Msa1459630 | 0.824616 | 7.328893e-54 | -8.615850e-47 |
| Msa0575540 | Msa1460310 | -0.807066 | 6.061692e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575540 | MtrunA17_Chr8g0392711 | 95.741 | 634 | 14 | 3 | 1 | 634 | 1 | 621 | 0.0 | 1254 |
| Msa0575540 | MtrunA17_Chr6g0451291 | 64.803 | 608 | 206 | 3 | 31 | 634 | 9 | 612 | 0.0 | 819 |
| Msa0575540 | MtrunA17_Chr6g0451281 | 62.420 | 628 | 223 | 5 | 11 | 634 | 21 | 639 | 0.0 | 819 |
| Msa0575540 | MtrunA17_Chr6g0451261 | 61.514 | 634 | 239 | 4 | 5 | 634 | 279 | 911 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575540 | AT1G73680.1 | 69.401 | 634 | 188 | 3 | 1 | 634 | 1 | 628 | 0.0 | 949 |
| Msa0575540 | AT1G73680.2 | 67.652 | 643 | 193 | 4 | 1 | 634 | 1 | 637 | 0.0 | 927 |
| Msa0575540 | AT1G73680.3 | 72.169 | 521 | 143 | 2 | 114 | 634 | 1 | 519 | 0.0 | 815 |
| Msa0575540 | AT3G01420.1 | 62.679 | 627 | 227 | 4 | 10 | 634 | 15 | 636 | 0.0 | 805 |
| Msa0575540 | AT1G73680.4 | 71.849 | 476 | 132 | 2 | 159 | 634 | 1 | 474 | 0.0 | 738 |
Find 156 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCATTTGGAAATATTT+TGG | 0.100271 | 4_1:+79435131 | Msa0575540:CDS |
| AAATCTTCCCACTTACTAAT+TGG | 0.152032 | 4_1:-79435841 | None:intergenic |
| TATAGAGGTATGTATTTCTT+AGG | 0.222425 | 4_1:-79436297 | None:intergenic |
| CCTCCGACGACTTTAAATTA+TGG | 0.229905 | 4_1:+79433497 | Msa0575540:CDS |
| TCCCTGAGATGACTGAAAAT+TGG | 0.233453 | 4_1:+79436229 | Msa0575540:CDS |
| GGGCAATATACTTGGGAATT+AGG | 0.236418 | 4_1:+79433315 | Msa0575540:CDS |
| GGTATCAAAGAGGGTCATTT+TGG | 0.261310 | 4_1:-79433100 | None:intergenic |
| CATAAGCTTCCAGTGTTGTT+GGG | 0.270454 | 4_1:+79433293 | Msa0575540:CDS |
| CATTTGTCTTCTCCTGTTGT+AGG | 0.275032 | 4_1:-79435291 | None:intergenic |
| AAGAGTTCACGAGTGTTTAT+AGG | 0.276589 | 4_1:+79435223 | Msa0575540:CDS |
| TTTCCTATCATTTCTGTCAT+TGG | 0.278143 | 4_1:-79435487 | None:intergenic |
| TTTCTTTATCTTTGTGATCA+TGG | 0.279891 | 4_1:+79435993 | Msa0575540:CDS |
| ACCAAGGAGTCCTAATGTTT+TGG | 0.297547 | 4_1:-79434172 | None:intergenic |
| GGTATGTATTTCTTAGGATT+TGG | 0.300998 | 4_1:-79436291 | None:intergenic |
| CATGTGGTGCTGTTACTTTA+TGG | 0.301909 | 4_1:+79435575 | Msa0575540:CDS |
| AAGAAATTCAAAGATTCATT+TGG | 0.309732 | 4_1:+79435120 | Msa0575540:CDS |
| ACCTTCGTTTGTGTATGTTT+TGG | 0.313730 | 4_1:-79436154 | None:intergenic |
| GGCTCTTCACACATGAAGTT+TGG | 0.314198 | 4_1:+79434146 | Msa0575540:CDS |
| AGGGATGGAAGTGTGATATA+TGG | 0.316910 | 4_1:+79434532 | Msa0575540:intron |
| AAGTCGTCGGAGGCATATTC+CGG | 0.320238 | 4_1:-79433487 | None:intergenic |
| CGATCACTTGATCGGTAGTC+AGG | 0.325900 | 4_1:+79433451 | Msa0575540:CDS |
| CTCCGACGACTTTAAATTAT+GGG | 0.335283 | 4_1:+79433498 | Msa0575540:CDS |
| TCAACATGATAGCTTGTTCA+TGG | 0.341489 | 4_1:+79433685 | Msa0575540:CDS |
| TCCAGTTGACATGGCTACTA+TGG | 0.351321 | 4_1:+79435660 | Msa0575540:CDS |
| TCTAAATCAATGGAAGAGTA+TGG | 0.354074 | 4_1:-79436388 | None:intergenic |
| TAGTGGATTAGTTGGTCTTA+AGG | 0.355480 | 4_1:+79435164 | Msa0575540:CDS |
| TACAGTTCATGATTCATGAT+TGG | 0.365374 | 4_1:+79433709 | Msa0575540:CDS |
| AGCTTCGAGGCCACCAGTGC+AGG | 0.374076 | 4_1:-79433624 | None:intergenic |
| GGCTGGTTATTCCCTTCTGC+AGG | 0.375799 | 4_1:+79434681 | Msa0575540:CDS |
| AGTTTGGCTTCCAAAACATT+AGG | 0.378367 | 4_1:+79434162 | Msa0575540:CDS |
| AATCTTCCCACTTACTAATT+GGG | 0.380096 | 4_1:-79435840 | None:intergenic |
| CTCATTGCACATGATATTGA+TGG | 0.387523 | 4_1:+79435622 | Msa0575540:CDS |
| TGATTGGATTGATCATTTAG+AGG | 0.390749 | 4_1:+79433725 | Msa0575540:CDS |
| AACTCTTCAGTAAGCGAATA+GGG | 0.394166 | 4_1:-79435207 | None:intergenic |
| CTACAGTCCAATCAATTGTA+TGG | 0.403949 | 4_1:-79434933 | None:intergenic |
| CTACCGATCAAGTGATCGTC+GGG | 0.415701 | 4_1:-79433446 | None:intergenic |
| ACTCTATAGGTATGCAAGAT+TGG | 0.417959 | 4_1:+79434885 | Msa0575540:CDS |
| GAACTCTTCAGTAAGCGAAT+AGG | 0.419424 | 4_1:-79435208 | None:intergenic |
| ATTTCGAACATCACCGGATA+CGG | 0.419806 | 4_1:-79434653 | None:intergenic |
| TCCATAGTAGCCATGTCAAC+TGG | 0.420756 | 4_1:-79435661 | None:intergenic |
| TAGTTTATAGAGATAGAGAA+AGG | 0.421895 | 4_1:+79435773 | Msa0575540:intron |
| AACACTAACATAGAAAAGTA+TGG | 0.422519 | 4_1:-79433121 | None:intergenic |
| TGGCATCCATGAGGATCAAC+TGG | 0.432200 | 4_1:+79434980 | Msa0575540:CDS |
| AAGACTAAGAAATTTCAAAC+TGG | 0.433686 | 4_1:+79434125 | Msa0575540:CDS |
| TTGATGATGAGCAACTCTAT+AGG | 0.440552 | 4_1:+79434872 | Msa0575540:CDS |
| TCTTTGTGATCATGGCTTCA+AGG | 0.440619 | 4_1:+79436001 | Msa0575540:CDS |
| AGTTTATAGAGATAGAGAAA+GGG | 0.446296 | 4_1:+79435774 | Msa0575540:intron |
| GGGTGGTTGCACGTGCCTGC+CGG | 0.447014 | 4_1:-79433425 | None:intergenic |
| GGAGCAAATGTTAGTATCCA+TGG | 0.447899 | 4_1:+79435543 | Msa0575540:CDS |
| CCCTGGTCTCCAACCTCTTG+TGG | 0.448983 | 4_1:+79433077 | Msa0575540:CDS |
| GCCACAAGAGGTTGGAGACC+AGG | 0.457452 | 4_1:-79433078 | None:intergenic |
| TGAAAGTGGTTCTAAATCAA+TGG | 0.459904 | 4_1:-79436398 | None:intergenic |
| AGTTGCTCATCATCAAAATC+AGG | 0.460874 | 4_1:-79434865 | None:intergenic |
| TCCAAAACATTAGGACTCCT+TGG | 0.461125 | 4_1:+79434171 | Msa0575540:CDS |
| CTTTCTTGCTAGAAGCTTCG+AGG | 0.462793 | 4_1:-79433637 | None:intergenic |
| TCATTTAGAGGACACTGAAC+AGG | 0.462942 | 4_1:+79433737 | Msa0575540:CDS |
| CCGGTGATGTTCGAAATTCA+TGG | 0.466050 | 4_1:+79434659 | Msa0575540:CDS |
| GCATAAGCTTCCAGTGTTGT+TGG | 0.466181 | 4_1:+79433292 | Msa0575540:CDS |
| CTTAAGGAGCCAAGAGATCA+TGG | 0.466526 | 4_1:+79435180 | Msa0575540:CDS |
| TAGGGAACTCCATGATCTCT+TGG | 0.467798 | 4_1:-79435189 | None:intergenic |
| CGAAACATCAAGCCTACAAC+AGG | 0.469821 | 4_1:+79435279 | Msa0575540:CDS |
| GGGATGGAAGTGTGATATAT+GGG | 0.472264 | 4_1:+79434533 | Msa0575540:intron |
| GAGGCCACCAGTGCAGGGTG+AGG | 0.479639 | 4_1:-79433618 | None:intergenic |
| TACAATCTGTTGCATGTTGG+AGG | 0.481984 | 4_1:+79433356 | Msa0575540:CDS |
| CCCGAGCTTAGTGGATTAGT+TGG | 0.482142 | 4_1:+79435156 | Msa0575540:CDS |
| ATAAGCTTCCAGTGTTGTTG+GGG | 0.485280 | 4_1:+79433294 | Msa0575540:CDS |
| CGAACAAAACATTCTGAAAG+TGG | 0.486067 | 4_1:-79436412 | None:intergenic |
| GGTAGTCAGGGAACTATCAT+TGG | 0.489155 | 4_1:+79433464 | Msa0575540:CDS |
| TTTCGAAGGACAAGCTCCTC+AGG | 0.489212 | 4_1:-79435261 | None:intergenic |
| ACCAACTAATCCACTAAGCT+CGG | 0.494691 | 4_1:-79435157 | None:intergenic |
| GTTTATAGAGATAGAGAAAG+GGG | 0.495286 | 4_1:+79435775 | Msa0575540:intron |
| AAACTGAAGATCTCAGAAGA+TGG | 0.498138 | 4_1:+79434601 | Msa0575540:CDS |
| GTAGCCATGTCAACTGGATC+AGG | 0.498191 | 4_1:-79435655 | None:intergenic |
| GTGCCAATGACAGAAATGAT+AGG | 0.502812 | 4_1:+79435484 | Msa0575540:CDS |
| AGAAAAGTATGGTATCAAAG+AGG | 0.504773 | 4_1:-79433110 | None:intergenic |
| CTTTGATCTTCTTCTCAGCA+TGG | 0.506564 | 4_1:-79435948 | None:intergenic |
| ATGAGGTTCCTTAGCCATGT+TGG | 0.507797 | 4_1:-79435604 | None:intergenic |
| GATGTTCGAAATTCATGGGC+TGG | 0.508622 | 4_1:+79434664 | Msa0575540:CDS |
| AGACCCTCACCCTGCACTGG+TGG | 0.509737 | 4_1:+79433614 | Msa0575540:CDS |
| CTTTGAAGGATGTGATTGAC+AGG | 0.509857 | 4_1:+79436202 | Msa0575540:CDS |
| GAGAAGCTGGACTTGATAGT+TGG | 0.512234 | 4_1:+79435922 | Msa0575540:CDS |
| AGAAGGGAATGAGCAAAGTA+AGG | 0.513265 | 4_1:+79434563 | Msa0575540:CDS |
| CAGCCGCTTGAGTAACCATC+AGG | 0.514618 | 4_1:-79434077 | None:intergenic |
| ACCCCATAATTTAAAGTCGT+CGG | 0.514864 | 4_1:-79433500 | None:intergenic |
| TGATGATGATGTTGAGAAGC+TGG | 0.517632 | 4_1:+79435909 | Msa0575540:CDS |
| ATAGAGAAAGGGGAGTTGCA+AGG | 0.518453 | 4_1:+79435785 | Msa0575540:CDS |
| GACTTACCAGTTGATCCTCA+TGG | 0.521146 | 4_1:-79434986 | None:intergenic |
| GTTAGACCCTCACCCTGCAC+TGG | 0.526913 | 4_1:+79433611 | Msa0575540:CDS |
| TTTCGAACATCACCGGATAC+GGG | 0.528141 | 4_1:-79434652 | None:intergenic |
| GGAACTTTCCAACATGGCTA+AGG | 0.528495 | 4_1:+79435596 | Msa0575540:CDS |
| TTGGAGACCAGGGTGAATGA+AGG | 0.531161 | 4_1:-79433067 | None:intergenic |
| CGTTACAATCTGTTGCATGT+TGG | 0.531167 | 4_1:+79433353 | Msa0575540:CDS |
| GAGAAAGGTATTCCCGTATC+CGG | 0.532581 | 4_1:+79434640 | Msa0575540:CDS |
| TAATAAACAAAGCCTGCAGA+AGG | 0.533377 | 4_1:-79434693 | None:intergenic |
| TAATGATCCCAATTAGTAAG+TGG | 0.534721 | 4_1:+79435833 | Msa0575540:CDS |
| AACTGAAGATCTCAGAAGAT+GGG | 0.535040 | 4_1:+79434602 | Msa0575540:CDS |
| CTTCTTGAGCATGATGAGAA+AGG | 0.538966 | 4_1:+79434625 | Msa0575540:CDS |
| AAACAAAACAGAGTCTTTGA+AGG | 0.539259 | 4_1:+79436188 | Msa0575540:CDS |
| GCTTCGAGGCCACCAGTGCA+GGG | 0.541610 | 4_1:-79433623 | None:intergenic |
| CTTTATGGAACTTTCCAACA+TGG | 0.544514 | 4_1:+79435590 | Msa0575540:CDS |
| TCTACACCCTTCATTCACCC+TGG | 0.544687 | 4_1:+79433060 | Msa0575540:CDS |
| ATGCTGAGAAGAAGATCAAA+GGG | 0.545504 | 4_1:+79435950 | Msa0575540:CDS |
| AGGCCACCAGTGCAGGGTGA+GGG | 0.545996 | 4_1:-79433617 | None:intergenic |
| CTCAAGTGCATTCTCTGTGT+GGG | 0.546472 | 4_1:+79436260 | Msa0575540:CDS |
| GTCAGGGAACTATCATTGGC+CGG | 0.549049 | 4_1:+79433468 | Msa0575540:CDS |
| CGGTGATGTTCGAAATTCAT+GGG | 0.553151 | 4_1:+79434660 | Msa0575540:CDS |
| TTGTAGGCTTGATGTTTCGA+AGG | 0.557809 | 4_1:-79435275 | None:intergenic |
| AGAAAGAGCTTCATAGACAC+AGG | 0.560247 | 4_1:+79433654 | Msa0575540:CDS |
| CATGCTGAGAAGAAGATCAA+AGG | 0.562475 | 4_1:+79435949 | Msa0575540:CDS |
| GGGGCTTATCTCAAATATAG+AGG | 0.563891 | 4_1:-79436312 | None:intergenic |
| ATATATGGGAACAATGAGAA+GGG | 0.571299 | 4_1:+79434547 | Msa0575540:CDS |
| GATATATGGGAACAATGAGA+AGG | 0.571690 | 4_1:+79434546 | Msa0575540:CDS |
| CCATGAATTTCGAACATCAC+CGG | 0.573382 | 4_1:-79434659 | None:intergenic |
| TGGAGACCAGGGTGAATGAA+GGG | 0.574228 | 4_1:-79433066 | None:intergenic |
| ACCACATGGTTGGTGGCCCA+TGG | 0.575046 | 4_1:-79435560 | None:intergenic |
| GAAAAGTATGGTATCAAAGA+GGG | 0.584808 | 4_1:-79433109 | None:intergenic |
| TAACAGCACCACATGGTTGG+TGG | 0.592861 | 4_1:-79435567 | None:intergenic |
| TATGCATATCGTACTCCGGC+AGG | 0.593657 | 4_1:+79433410 | Msa0575540:CDS |
| AATGATCCCAATTAGTAAGT+GGG | 0.596335 | 4_1:+79435834 | Msa0575540:CDS |
| AAAACATTAGGACTCCTTGG+TGG | 0.596480 | 4_1:+79434174 | Msa0575540:CDS |
| GCTCAAGTGCATTCTCTGTG+TGG | 0.597626 | 4_1:+79436259 | Msa0575540:CDS |
| CACCCCGACGATCACTTGAT+CGG | 0.601063 | 4_1:+79433443 | Msa0575540:CDS |
| GAGCAAATGTTAGTATCCAT+GGG | 0.602349 | 4_1:+79435544 | Msa0575540:CDS |
| CCAACTAATCCACTAAGCTC+GGG | 0.606288 | 4_1:-79435156 | None:intergenic |
| CCACAAGAGGTTGGAGACCA+GGG | 0.607968 | 4_1:-79433077 | None:intergenic |
| AAGGGTGTAGAGAAAAGAGA+AGG | 0.612180 | 4_1:-79433048 | None:intergenic |
| CATCAATATCATGTGCAATG+AGG | 0.613592 | 4_1:-79435621 | None:intergenic |
| AGATTTAACAGATGATCAAG+AGG | 0.616215 | 4_1:+79435858 | Msa0575540:CDS |
| CAAAGTAAGGACATTCAAAG+AGG | 0.617033 | 4_1:+79434576 | Msa0575540:CDS |
| GTGGAAATCAGTGCTCCTGA+TGG | 0.623708 | 4_1:+79434062 | Msa0575540:CDS |
| TCCGACGACTTTAAATTATG+GGG | 0.625649 | 4_1:+79433499 | Msa0575540:CDS |
| CAGAAATGATAGGAAAACAA+GGG | 0.629712 | 4_1:+79435494 | Msa0575540:CDS |
| AAAGTAAGGACATTCAAAGA+GGG | 0.630932 | 4_1:+79434577 | Msa0575540:CDS |
| GATCACTTGATCGGTAGTCA+GGG | 0.631545 | 4_1:+79433452 | Msa0575540:CDS |
| ACAGAAATGATAGGAAAACA+AGG | 0.633600 | 4_1:+79435493 | Msa0575540:CDS |
| AATAAACAAAGCCTGCAGAA+GGG | 0.635093 | 4_1:-79434692 | None:intergenic |
| GTTGACATGGCTACTATGGA+AGG | 0.637307 | 4_1:+79435664 | Msa0575540:CDS |
| GCTCCTGATGGTTACTCAAG+CGG | 0.639000 | 4_1:+79434074 | Msa0575540:CDS |
| TTGCATGTTGGAGGAGTGAG+TGG | 0.640130 | 4_1:+79433365 | Msa0575540:CDS |
| CGATCAAGTGATCGTCGGGG+TGG | 0.644828 | 4_1:-79433442 | None:intergenic |
| AAGACCTGATCCAGTTGACA+TGG | 0.645059 | 4_1:+79435651 | Msa0575540:CDS |
| ACTACCGATCAAGTGATCGT+CGG | 0.652642 | 4_1:-79433447 | None:intergenic |
| AAGTAACAGCACCACATGGT+TGG | 0.654011 | 4_1:-79435570 | None:intergenic |
| TTGTGGACAAAATTGTGCTG+TGG | 0.655463 | 4_1:+79433270 | Msa0575540:CDS |
| TCCAAAACATACACAAACGA+AGG | 0.658132 | 4_1:+79436153 | Msa0575540:CDS |
| GGTTATTGAAGCTCTCAAAG+AGG | 0.662069 | 4_1:+79435879 | Msa0575540:CDS |
| AGAAATGATAGGAAAACAAG+GGG | 0.662137 | 4_1:+79435495 | Msa0575540:CDS |
| ACACTATGCATATCGTACTC+CGG | 0.664405 | 4_1:+79433406 | Msa0575540:CDS |
| TAAGCTTCCAGTGTTGTTGG+GGG | 0.664838 | 4_1:+79433295 | Msa0575540:CDS |
| CATAAAGTAACAGCACCACA+TGG | 0.666274 | 4_1:-79435574 | None:intergenic |
| CCATAATTTAAAGTCGTCGG+AGG | 0.668887 | 4_1:-79433497 | None:intergenic |
| GATGCATGCACTCTTGCCTG+AGG | 0.680891 | 4_1:+79435245 | Msa0575540:CDS |
| AATTAAACTACTTACCACCA+AGG | 0.695218 | 4_1:-79434188 | None:intergenic |
| TCCATGGGCCACCAACCATG+TGG | 0.700524 | 4_1:+79435559 | Msa0575540:CDS |
| GAAAGAGCTTCATAGACACA+GGG | 0.708446 | 4_1:+79433655 | Msa0575540:CDS |
| TACCGATCAAGTGATCGTCG+GGG | 0.754460 | 4_1:-79433445 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATAAAAGAATTAAA+TGG | - | chr4_1:79433533-79433552 | None:intergenic | 10.0% |
| !!! | CAAATAAAATTTGATTATTT+TGG | + | chr4_1:79436049-79436068 | Msa0575540:intron | 10.0% |
| !! | TGATAATATTGAATTTATGT+AGG | + | chr4_1:79433238-79433257 | Msa0575540:intron | 15.0% |
| !! | ATAAAAAATTCTTAACTCTT+GGG | - | chr4_1:79435370-79435389 | None:intergenic | 15.0% |
| !!! | TATAATTGCATATGTTATTT+AGG | + | chr4_1:79435461-79435480 | Msa0575540:intron | 15.0% |
| !!! | ATAATTGCATATGTTATTTA+GGG | + | chr4_1:79435462-79435481 | Msa0575540:intron | 15.0% |
| !! | TCTATGTTAAATGAGAATAT+AGG | + | chr4_1:79433794-79433813 | Msa0575540:intron | 20.0% |
| !! | AAAAATTTGAAAGTCTTTAG+AGG | - | chr4_1:79434104-79434123 | None:intergenic | 20.0% |
| !!! | TAGAGTTTACTATTGTTTTT+TGG | + | chr4_1:79434496-79434515 | Msa0575540:intron | 20.0% |
| !!! | TTTTTGGTATGTGAATTATT+AGG | + | chr4_1:79434512-79434531 | Msa0575540:intron | 20.0% |
| !!! | TTTTGGTATGTGAATTATTA+GGG | + | chr4_1:79434513-79434532 | Msa0575540:intron | 20.0% |
| !!! | GTAAAACTTTCATTTTCTTT+TGG | + | chr4_1:79435078-79435097 | Msa0575540:intron | 20.0% |
| !! | AAGAAATTCAAAGATTCATT+TGG | + | chr4_1:79435120-79435139 | Msa0575540:CDS | 20.0% |
| !!! | AGATTCATTTGGAAATATTT+TGG | + | chr4_1:79435131-79435150 | Msa0575540:CDS | 20.0% |
| !!! | GATTCATTTGGAAATATTTT+GGG | + | chr4_1:79435132-79435151 | Msa0575540:CDS | 20.0% |
| !! | CATAAAAAATTCTTAACTCT+TGG | - | chr4_1:79435371-79435390 | None:intergenic | 20.0% |
| !!! | AAAATTTGATTATTTTGGCT+TGG | + | chr4_1:79436054-79436073 | Msa0575540:intron | 20.0% |
| ! | AACACTAACATAGAAAAGTA+TGG | - | chr4_1:79433124-79433143 | None:intergenic | 25.0% |
| ! | TCCAAAACCTTAATGTAATT+TGG | + | chr4_1:79433999-79434018 | Msa0575540:intron | 25.0% |
| !! | TCCAAATTACATTAAGGTTT+TGG | - | chr4_1:79434003-79434022 | None:intergenic | 25.0% |
| ! | CTTAGATCCAAATTACATTA+AGG | - | chr4_1:79434009-79434028 | None:intergenic | 25.0% |
| ! | AAGACTAAGAAATTTCAAAC+TGG | + | chr4_1:79434125-79434144 | Msa0575540:CDS | 25.0% |
| ! | AACACTTGTGAAGATATTTA+AGG | + | chr4_1:79434276-79434295 | Msa0575540:intron | 25.0% |
| ! | TGTCAGTGTAAAAACTAAAA+AGG | - | chr4_1:79434357-79434376 | None:intergenic | 25.0% |
| !! | TAACCACCTTTTAAATTTGA+TGG | + | chr4_1:79434402-79434421 | Msa0575540:intron | 25.0% |
| ! | GTTGAACCATCAAATTTAAA+AGG | - | chr4_1:79434411-79434430 | None:intergenic | 25.0% |
| !! | TTTTCATCTGTTGTATAACT+TGG | + | chr4_1:79434761-79434780 | Msa0575540:intron | 25.0% |
| ! | CAAAAATCCATACAATTGAT+TGG | + | chr4_1:79434926-79434945 | Msa0575540:CDS | 25.0% |
| !! | CTTAAAAACTGATACTCTTT+TGG | + | chr4_1:79434960-79434979 | Msa0575540:CDS | 25.0% |
| !!! | TGCATATGGATATATTTTGA+AGG | + | chr4_1:79435009-79435028 | Msa0575540:intron | 25.0% |
| !!! | TATACTTTTCAAGGATTGAA+GGG | - | chr4_1:79435317-79435336 | None:intergenic | 25.0% |
| !!! | AGATAAGAGTATACTTTTCA+AGG | - | chr4_1:79435326-79435345 | None:intergenic | 25.0% |
| !!! | GAAAACATTTTTTCATAGTG+TGG | + | chr4_1:79435415-79435434 | Msa0575540:intron | 25.0% |
| ! | GAAAAAAGGCTTTCAAAAAT+AGG | + | chr4_1:79435517-79435536 | Msa0575540:CDS | 25.0% |
| ! | TAGTTTATAGAGATAGAGAA+AGG | + | chr4_1:79435773-79435792 | Msa0575540:intron | 25.0% |
| ! | AGTTTATAGAGATAGAGAAA+GGG | + | chr4_1:79435774-79435793 | Msa0575540:intron | 25.0% |
| ! | TTTCTTTATCTTTGTGATCA+TGG | + | chr4_1:79435993-79436012 | Msa0575540:CDS | 25.0% |
| !! | TATAGAGGTATGTATTTCTT+AGG | - | chr4_1:79436300-79436319 | None:intergenic | 25.0% |
| !! | TTAACCAAACAATTTTTGTG+GGG | - | chr4_1:79436334-79436353 | None:intergenic | 25.0% |
| !! | CTTAACCAAACAATTTTTGT+GGG | - | chr4_1:79436335-79436354 | None:intergenic | 25.0% |
| !! | TCTTAACCAAACAATTTTTG+TGG | - | chr4_1:79436336-79436355 | None:intergenic | 25.0% |
| ! | GAAAAGTATGGTATCAAAGA+GGG | - | chr4_1:79433112-79433131 | None:intergenic | 30.0% |
| ! | AGAAAAGTATGGTATCAAAG+AGG | - | chr4_1:79433113-79433132 | None:intergenic | 30.0% |
| ! | TATGTAGGTGATACATTTTG+TGG | + | chr4_1:79433253-79433272 | Msa0575540:intron | 30.0% |
| TACAGTTCATGATTCATGAT+TGG | + | chr4_1:79433709-79433728 | Msa0575540:CDS | 30.0% | |
| TGATTGGATTGATCATTTAG+AGG | + | chr4_1:79433725-79433744 | Msa0575540:CDS | 30.0% | |
| AGCTATGTATGTTTAGATTC+GGG | - | chr4_1:79433908-79433927 | None:intergenic | 30.0% | |
| CAGCTATGTATGTTTAGATT+CGG | - | chr4_1:79433909-79433928 | None:intergenic | 30.0% | |
| !!! | ACATTAAGGTTTTGGAGAAT+TGG | - | chr4_1:79433995-79434014 | None:intergenic | 30.0% |
| CATTATGCAAGAAATGCAAT+TGG | - | chr4_1:79434032-79434051 | None:intergenic | 30.0% | |
| TGCATTTCTTGCATAATGTT+TGG | + | chr4_1:79434034-79434053 | Msa0575540:intron | 30.0% | |
| ! | TCTTGCATAATGTTTGGAAT+AGG | + | chr4_1:79434040-79434059 | Msa0575540:intron | 30.0% |
| AATTAAACTACTTACCACCA+AGG | - | chr4_1:79434191-79434210 | None:intergenic | 30.0% | |
| TATCTTCACAAGTGTTTACA+TGG | - | chr4_1:79434272-79434291 | None:intergenic | 30.0% | |
| TTAAGGAACTGATGTAACAA+AGG | + | chr4_1:79434293-79434312 | Msa0575540:intron | 30.0% | |
| TAAGGAACTGATGTAACAAA+GGG | + | chr4_1:79434294-79434313 | Msa0575540:intron | 30.0% | |
| GAACCATCAAATTTAAAAGG+TGG | - | chr4_1:79434408-79434427 | None:intergenic | 30.0% | |
| ATATATGGGAACAATGAGAA+GGG | + | chr4_1:79434547-79434566 | Msa0575540:CDS | 30.0% | |
| AAAGTAAGGACATTCAAAGA+GGG | + | chr4_1:79434577-79434596 | Msa0575540:CDS | 30.0% | |
| ! | TTTTTGTGTTCTTTGCTTAC+AGG | + | chr4_1:79434834-79434853 | Msa0575540:intron | 30.0% |
| ! | AACTTTCATTTTCTTTTGGC+AGG | + | chr4_1:79435082-79435101 | Msa0575540:intron | 30.0% |
| !! | GTATACTTTTCAAGGATTGA+AGG | - | chr4_1:79435318-79435337 | None:intergenic | 30.0% |
| TTTCCTATCATTTCTGTCAT+TGG | - | chr4_1:79435490-79435509 | None:intergenic | 30.0% | |
| ACAGAAATGATAGGAAAACA+AGG | + | chr4_1:79435493-79435512 | Msa0575540:CDS | 30.0% | |
| CAGAAATGATAGGAAAACAA+GGG | + | chr4_1:79435494-79435513 | Msa0575540:CDS | 30.0% | |
| AGAAATGATAGGAAAACAAG+GGG | + | chr4_1:79435495-79435514 | Msa0575540:CDS | 30.0% | |
| AAGGCTTTCAAAAATAGGAA+TGG | + | chr4_1:79435522-79435541 | Msa0575540:CDS | 30.0% | |
| GTTTATAGAGATAGAGAAAG+GGG | + | chr4_1:79435775-79435794 | Msa0575540:intron | 30.0% | |
| TAATGATCCCAATTAGTAAG+TGG | + | chr4_1:79435833-79435852 | Msa0575540:CDS | 30.0% | |
| AATGATCCCAATTAGTAAGT+GGG | + | chr4_1:79435834-79435853 | Msa0575540:CDS | 30.0% | |
| AATCTTCCCACTTACTAATT+GGG | - | chr4_1:79435843-79435862 | None:intergenic | 30.0% | |
| AAATCTTCCCACTTACTAAT+TGG | - | chr4_1:79435844-79435863 | None:intergenic | 30.0% | |
| AGATTTAACAGATGATCAAG+AGG | + | chr4_1:79435858-79435877 | Msa0575540:CDS | 30.0% | |
| !!! | TATTTTGGCTTGGAATCTTA+TGG | + | chr4_1:79436064-79436083 | Msa0575540:intron | 30.0% |
| AAACAAAACAGAGTCTTTGA+AGG | + | chr4_1:79436188-79436207 | Msa0575540:CDS | 30.0% | |
| GGTATGTATTTCTTAGGATT+TGG | - | chr4_1:79436294-79436313 | None:intergenic | 30.0% | |
| TCTAAATCAATGGAAGAGTA+TGG | - | chr4_1:79436391-79436410 | None:intergenic | 30.0% | |
| !! | TGAAAGTGGTTCTAAATCAA+TGG | - | chr4_1:79436401-79436420 | None:intergenic | 30.0% |
| !!! | TTTTGAGGTATCAGAAAGAA+CGG | - | chr4_1:79436518-79436537 | None:intergenic | 30.0% |
| CTCCGACGACTTTAAATTAT+GGG | + | chr4_1:79433498-79433517 | Msa0575540:CDS | 35.0% | |
| TCCGACGACTTTAAATTATG+GGG | + | chr4_1:79433499-79433518 | Msa0575540:CDS | 35.0% | |
| ! | ACCCCATAATTTAAAGTCGT+CGG | - | chr4_1:79433503-79433522 | None:intergenic | 35.0% |
| !! | TCAACATGATAGCTTGTTCA+TGG | + | chr4_1:79433685-79433704 | Msa0575540:CDS | 35.0% |
| AGCTGTATCTGATGTAACAA+AGG | + | chr4_1:79433924-79433943 | Msa0575540:intron | 35.0% | |
| GCTGTATCTGATGTAACAAA+GGG | + | chr4_1:79433925-79433944 | Msa0575540:intron | 35.0% | |
| !!! | TAAGGTTTTGGAGAATTGGT+TGG | - | chr4_1:79433991-79434010 | None:intergenic | 35.0% |
| ! | TGCATAATGTTTGGAATAGG+TGG | + | chr4_1:79434043-79434062 | Msa0575540:intron | 35.0% |
| ! | AGTTTGGCTTCCAAAACATT+AGG | + | chr4_1:79434162-79434181 | Msa0575540:CDS | 35.0% |
| ! | GAAGATTTAGTTCAGCAAAC+AGG | + | chr4_1:79434450-79434469 | Msa0575540:intron | 35.0% |
| AGTTCAGCAAACAGGATTAT+TGG | + | chr4_1:79434458-79434477 | Msa0575540:intron | 35.0% | |
| GGTATGTGAATTATTAGGGA+TGG | + | chr4_1:79434517-79434536 | Msa0575540:intron | 35.0% | |
| GATATATGGGAACAATGAGA+AGG | + | chr4_1:79434546-79434565 | Msa0575540:CDS | 35.0% | |
| CAAAGTAAGGACATTCAAAG+AGG | + | chr4_1:79434576-79434595 | Msa0575540:CDS | 35.0% | |
| AAACTGAAGATCTCAGAAGA+TGG | + | chr4_1:79434601-79434620 | Msa0575540:CDS | 35.0% | |
| AACTGAAGATCTCAGAAGAT+GGG | + | chr4_1:79434602-79434621 | Msa0575540:CDS | 35.0% | |
| AATAAACAAAGCCTGCAGAA+GGG | - | chr4_1:79434695-79434714 | None:intergenic | 35.0% | |
| TAATAAACAAAGCCTGCAGA+AGG | - | chr4_1:79434696-79434715 | None:intergenic | 35.0% | |
| AAAACGAGCATTAATTTCCG+AGG | - | chr4_1:79434818-79434837 | None:intergenic | 35.0% | |
| AGTTGCTCATCATCAAAATC+AGG | - | chr4_1:79434868-79434887 | None:intergenic | 35.0% | |
| !! | TTGATGATGAGCAACTCTAT+AGG | + | chr4_1:79434872-79434891 | Msa0575540:CDS | 35.0% |
| ACTCTATAGGTATGCAAGAT+TGG | + | chr4_1:79434885-79434904 | Msa0575540:CDS | 35.0% | |
| CTACAGTCCAATCAATTGTA+TGG | - | chr4_1:79434936-79434955 | None:intergenic | 35.0% | |
| !! | GGATATATTTTGAAGGAGAC+AGG | + | chr4_1:79435016-79435035 | Msa0575540:intron | 35.0% |
| ! | TCATTTTCTTTTGGCAGGTA+TGG | + | chr4_1:79435087-79435106 | Msa0575540:intron | 35.0% |
| ! | TTTTGGCAGGTATGGATTTT+TGG | + | chr4_1:79435095-79435114 | Msa0575540:intron | 35.0% |
| ! | TTTGGCAGGTATGGATTTTT+GGG | + | chr4_1:79435096-79435115 | Msa0575540:intron | 35.0% |
| !! | TAGTGGATTAGTTGGTCTTA+AGG | + | chr4_1:79435164-79435183 | Msa0575540:CDS | 35.0% |
| AACTCTTCAGTAAGCGAATA+GGG | - | chr4_1:79435210-79435229 | None:intergenic | 35.0% | |
| AAGAGTTCACGAGTGTTTAT+AGG | + | chr4_1:79435223-79435242 | Msa0575540:CDS | 35.0% | |
| TAGGAAAACAAGGGGAAAAA+AGG | + | chr4_1:79435503-79435522 | Msa0575540:CDS | 35.0% | |
| GAGCAAATGTTAGTATCCAT+GGG | + | chr4_1:79435544-79435563 | Msa0575540:CDS | 35.0% | |
| CTTTATGGAACTTTCCAACA+TGG | + | chr4_1:79435590-79435609 | Msa0575540:CDS | 35.0% | |
| CATCAATATCATGTGCAATG+AGG | - | chr4_1:79435624-79435643 | None:intergenic | 35.0% | |
| CTCATTGCACATGATATTGA+TGG | + | chr4_1:79435622-79435641 | Msa0575540:CDS | 35.0% | |
| ! | TACAAAAGCATGCTTGCAAA+AGG | - | chr4_1:79435705-79435724 | None:intergenic | 35.0% |
| ATGCTGAGAAGAAGATCAAA+GGG | + | chr4_1:79435950-79435969 | Msa0575540:CDS | 35.0% | |
| ! | TGGAATCTTATGGTTTTCTG+TGG | + | chr4_1:79436074-79436093 | Msa0575540:intron | 35.0% |
| TCCAAAACATACACAAACGA+AGG | + | chr4_1:79436153-79436172 | Msa0575540:CDS | 35.0% | |
| ! | ACCTTCGTTTGTGTATGTTT+TGG | - | chr4_1:79436157-79436176 | None:intergenic | 35.0% |
| !!! | ACACAAACGAAGGTTTTGAA+TGG | + | chr4_1:79436163-79436182 | Msa0575540:CDS | 35.0% |
| !!! | CACAAACGAAGGTTTTGAAT+GGG | + | chr4_1:79436164-79436183 | Msa0575540:CDS | 35.0% |
| ! | TCCAATTTTCAGTCATCTCA+GGG | - | chr4_1:79436233-79436252 | None:intergenic | 35.0% |
| ! | ATCCAATTTTCAGTCATCTC+AGG | - | chr4_1:79436234-79436253 | None:intergenic | 35.0% |
| TAAGCCCCACAAAAATTGTT+TGG | + | chr4_1:79436327-79436346 | Msa0575540:exon | 35.0% | |
| ! | CGAACAAAACATTCTGAAAG+TGG | - | chr4_1:79436415-79436434 | None:intergenic | 35.0% |
| ! | AAGGGTGTAGAGAAAAGAGA+AGG | - | chr4_1:79433051-79433070 | None:intergenic | 40.0% |
| ! | GGTATCAAAGAGGGTCATTT+TGG | - | chr4_1:79433103-79433122 | None:intergenic | 40.0% |
| TTGTGGACAAAATTGTGCTG+TGG | + | chr4_1:79433270-79433289 | Msa0575540:CDS | 40.0% | |
| ! | CATAAGCTTCCAGTGTTGTT+GGG | + | chr4_1:79433293-79433312 | Msa0575540:CDS | 40.0% |
| ! | ATAAGCTTCCAGTGTTGTTG+GGG | + | chr4_1:79433294-79433313 | Msa0575540:CDS | 40.0% |
| TTGTTGGGGGCAATATACTT+GGG | + | chr4_1:79433308-79433327 | Msa0575540:CDS | 40.0% | |
| GGGCAATATACTTGGGAATT+AGG | + | chr4_1:79433315-79433334 | Msa0575540:CDS | 40.0% | |
| CGTTACAATCTGTTGCATGT+TGG | + | chr4_1:79433353-79433372 | Msa0575540:CDS | 40.0% | |
| TACAATCTGTTGCATGTTGG+AGG | + | chr4_1:79433356-79433375 | Msa0575540:CDS | 40.0% | |
| ACACTATGCATATCGTACTC+CGG | + | chr4_1:79433406-79433425 | Msa0575540:CDS | 40.0% | |
| ! | CCATAATTTAAAGTCGTCGG+AGG | - | chr4_1:79433500-79433519 | None:intergenic | 40.0% |
| CCTCCGACGACTTTAAATTA+TGG | + | chr4_1:79433497-79433516 | Msa0575540:CDS | 40.0% | |
| AGAAAGAGCTTCATAGACAC+AGG | + | chr4_1:79433654-79433673 | Msa0575540:CDS | 40.0% | |
| GAAAGAGCTTCATAGACACA+GGG | + | chr4_1:79433655-79433674 | Msa0575540:CDS | 40.0% | |
| TCATTTAGAGGACACTGAAC+AGG | + | chr4_1:79433737-79433756 | Msa0575540:CDS | 40.0% | |
| TCCAAAACATTAGGACTCCT+TGG | + | chr4_1:79434171-79434190 | Msa0575540:CDS | 40.0% | |
| ! | ACCAAGGAGTCCTAATGTTT+TGG | - | chr4_1:79434175-79434194 | None:intergenic | 40.0% |
| AAAACATTAGGACTCCTTGG+TGG | + | chr4_1:79434174-79434193 | Msa0575540:CDS | 40.0% | |
| ! | AGGGATGGAAGTGTGATATA+TGG | + | chr4_1:79434532-79434551 | Msa0575540:intron | 40.0% |
| ! | GGGATGGAAGTGTGATATAT+GGG | + | chr4_1:79434533-79434552 | Msa0575540:intron | 40.0% |
| AGAAGGGAATGAGCAAAGTA+AGG | + | chr4_1:79434563-79434582 | Msa0575540:CDS | 40.0% | |
| CTTCTTGAGCATGATGAGAA+AGG | + | chr4_1:79434625-79434644 | Msa0575540:CDS | 40.0% | |
| ATTTCGAACATCACCGGATA+CGG | - | chr4_1:79434656-79434675 | None:intergenic | 40.0% | |
| CCATGAATTTCGAACATCAC+CGG | - | chr4_1:79434662-79434681 | None:intergenic | 40.0% | |
| CGGTGATGTTCGAAATTCAT+GGG | + | chr4_1:79434660-79434679 | Msa0575540:CDS | 40.0% | |
| !!! | ACTGCACTCATTTTTTGCCT+CGG | + | chr4_1:79434798-79434817 | Msa0575540:intron | 40.0% |
| ! | ATACTCTTTTGGCATCCATG+AGG | + | chr4_1:79434971-79434990 | Msa0575540:CDS | 40.0% |
| TCAACTGGTAAGTCTGCATA+TGG | + | chr4_1:79434995-79435014 | Msa0575540:intron | 40.0% | |
| ! | TTGGCAGGTATGGATTTTTG+GGG | + | chr4_1:79435097-79435116 | Msa0575540:intron | 40.0% |
| ACCAACTAATCCACTAAGCT+CGG | - | chr4_1:79435160-79435179 | None:intergenic | 40.0% | |
| GAACTCTTCAGTAAGCGAAT+AGG | - | chr4_1:79435211-79435230 | None:intergenic | 40.0% | |
| TTGTAGGCTTGATGTTTCGA+AGG | - | chr4_1:79435278-79435297 | None:intergenic | 40.0% | |
| CATTTGTCTTCTCCTGTTGT+AGG | - | chr4_1:79435294-79435313 | None:intergenic | 40.0% | |
| GTGCCAATGACAGAAATGAT+AGG | + | chr4_1:79435484-79435503 | Msa0575540:CDS | 40.0% | |
| GGAGCAAATGTTAGTATCCA+TGG | + | chr4_1:79435543-79435562 | Msa0575540:CDS | 40.0% | |
| CATAAAGTAACAGCACCACA+TGG | - | chr4_1:79435577-79435596 | None:intergenic | 40.0% | |
| !! | CATGTGGTGCTGTTACTTTA+TGG | + | chr4_1:79435575-79435594 | Msa0575540:CDS | 40.0% |
| GGTTATTGAAGCTCTCAAAG+AGG | + | chr4_1:79435879-79435898 | Msa0575540:CDS | 40.0% | |
| ! | TGATGATGATGTTGAGAAGC+TGG | + | chr4_1:79435909-79435928 | Msa0575540:CDS | 40.0% |
| CTTTGATCTTCTTCTCAGCA+TGG | - | chr4_1:79435951-79435970 | None:intergenic | 40.0% | |
| CATGCTGAGAAGAAGATCAA+AGG | + | chr4_1:79435949-79435968 | Msa0575540:CDS | 40.0% | |
| TCTTTGTGATCATGGCTTCA+AGG | + | chr4_1:79436001-79436020 | Msa0575540:CDS | 40.0% | |
| CTGTGGTGACTATGATGTTT+AGG | + | chr4_1:79436091-79436110 | Msa0575540:intron | 40.0% | |
| TGGTGACTATGATGTTTAGG+AGG | + | chr4_1:79436094-79436113 | Msa0575540:intron | 40.0% | |
| ! | CTTTGAAGGATGTGATTGAC+AGG | + | chr4_1:79436202-79436221 | Msa0575540:CDS | 40.0% |
| TCCCTGAGATGACTGAAAAT+TGG | + | chr4_1:79436229-79436248 | Msa0575540:CDS | 40.0% | |
| GGGGCTTATCTCAAATATAG+AGG | - | chr4_1:79436315-79436334 | None:intergenic | 40.0% | |
| !! | TCATTTTGGCCACAAGAGGT+TGG | - | chr4_1:79433089-79433108 | None:intergenic | 45.0% |
| GCATAAGCTTCCAGTGTTGT+TGG | + | chr4_1:79433292-79433311 | Msa0575540:CDS | 45.0% | |
| ! | TAAGCTTCCAGTGTTGTTGG+GGG | + | chr4_1:79433295-79433314 | Msa0575540:CDS | 45.0% |
| TATATTGCCCCCAACAACAC+TGG | - | chr4_1:79433305-79433324 | None:intergenic | 45.0% | |
| GTTGTTGGGGGCAATATACT+TGG | + | chr4_1:79433307-79433326 | Msa0575540:CDS | 45.0% | |
| ACTACCGATCAAGTGATCGT+CGG | - | chr4_1:79433450-79433469 | None:intergenic | 45.0% | |
| GATCACTTGATCGGTAGTCA+GGG | + | chr4_1:79433452-79433471 | Msa0575540:CDS | 45.0% | |
| GGTAGTCAGGGAACTATCAT+TGG | + | chr4_1:79433464-79433483 | Msa0575540:CDS | 45.0% | |
| CTTTCTTGCTAGAAGCTTCG+AGG | - | chr4_1:79433640-79433659 | None:intergenic | 45.0% | |
| GATGTAACAAAGGGACACGA+TGG | + | chr4_1:79433934-79433953 | Msa0575540:intron | 45.0% | |
| GGCTCTTCACACATGAAGTT+TGG | + | chr4_1:79434146-79434165 | Msa0575540:CDS | 45.0% | |
| !! | GAGAAAGGTATTCCCGTATC+CGG | + | chr4_1:79434640-79434659 | Msa0575540:CDS | 45.0% |
| TTTCGAACATCACCGGATAC+GGG | - | chr4_1:79434655-79434674 | None:intergenic | 45.0% | |
| CCGGTGATGTTCGAAATTCA+TGG | + | chr4_1:79434659-79434678 | Msa0575540:CDS | 45.0% | |
| GATGTTCGAAATTCATGGGC+TGG | + | chr4_1:79434664-79434683 | Msa0575540:CDS | 45.0% | |
| ATGAGTGCAGTGGCAGAAAA+TGG | - | chr4_1:79434789-79434808 | None:intergenic | 45.0% | |
| GAGGCAAAAAATGAGTGCAG+TGG | - | chr4_1:79434799-79434818 | None:intergenic | 45.0% | |
| GACTTACCAGTTGATCCTCA+TGG | - | chr4_1:79434989-79435008 | None:intergenic | 45.0% | |
| CCAACTAATCCACTAAGCTC+GGG | - | chr4_1:79435159-79435178 | None:intergenic | 45.0% | |
| CTTAAGGAGCCAAGAGATCA+TGG | + | chr4_1:79435180-79435199 | Msa0575540:CDS | 45.0% | |
| TAGGGAACTCCATGATCTCT+TGG | - | chr4_1:79435192-79435211 | None:intergenic | 45.0% | |
| CGAAACATCAAGCCTACAAC+AGG | + | chr4_1:79435279-79435298 | Msa0575540:CDS | 45.0% | |
| !! | TAGTGTGGTTCTGAATGCGA+AGG | + | chr4_1:79435430-79435449 | Msa0575540:intron | 45.0% |
| !! | AGTGTGGTTCTGAATGCGAA+GGG | + | chr4_1:79435431-79435450 | Msa0575540:intron | 45.0% |
| AAGTAACAGCACCACATGGT+TGG | - | chr4_1:79435573-79435592 | None:intergenic | 45.0% | |
| GGAACTTTCCAACATGGCTA+AGG | + | chr4_1:79435596-79435615 | Msa0575540:CDS | 45.0% | |
| ATGAGGTTCCTTAGCCATGT+TGG | - | chr4_1:79435607-79435626 | None:intergenic | 45.0% | |
| AAGACCTGATCCAGTTGACA+TGG | + | chr4_1:79435651-79435670 | Msa0575540:CDS | 45.0% | |
| TCCAGTTGACATGGCTACTA+TGG | + | chr4_1:79435660-79435679 | Msa0575540:CDS | 45.0% | |
| TCCATAGTAGCCATGTCAAC+TGG | - | chr4_1:79435664-79435683 | None:intergenic | 45.0% | |
| GTTGACATGGCTACTATGGA+AGG | + | chr4_1:79435664-79435683 | Msa0575540:CDS | 45.0% | |
| ATAGAGAAAGGGGAGTTGCA+AGG | + | chr4_1:79435785-79435804 | Msa0575540:CDS | 45.0% | |
| ! | GAGAAGCTGGACTTGATAGT+TGG | + | chr4_1:79435922-79435941 | Msa0575540:CDS | 45.0% |
| CTCAAGTGCATTCTCTGTGT+GGG | + | chr4_1:79436260-79436279 | Msa0575540:CDS | 45.0% | |
| !! | CATATATAATTAATAAATAT+TGG | - | chr4_1:79433764-79433783 | None:intergenic | 5.0% |
| TCTACACCCTTCATTCACCC+TGG | + | chr4_1:79433060-79433079 | Msa0575540:CDS | 50.0% | |
| TGGAGACCAGGGTGAATGAA+GGG | - | chr4_1:79433069-79433088 | None:intergenic | 50.0% | |
| TTGGAGACCAGGGTGAATGA+AGG | - | chr4_1:79433070-79433089 | None:intergenic | 50.0% | |
| !! | AGGGTCATTTTGGCCACAAG+AGG | - | chr4_1:79433093-79433112 | None:intergenic | 50.0% |
| TTGCATGTTGGAGGAGTGAG+TGG | + | chr4_1:79433365-79433384 | Msa0575540:CDS | 50.0% | |
| TATGCATATCGTACTCCGGC+AGG | + | chr4_1:79433410-79433429 | Msa0575540:CDS | 50.0% | |
| TACCGATCAAGTGATCGTCG+GGG | - | chr4_1:79433448-79433467 | None:intergenic | 50.0% | |
| CTACCGATCAAGTGATCGTC+GGG | - | chr4_1:79433449-79433468 | None:intergenic | 50.0% | |
| CGATCACTTGATCGGTAGTC+AGG | + | chr4_1:79433451-79433470 | Msa0575540:CDS | 50.0% | |
| GTCAGGGAACTATCATTGGC+CGG | + | chr4_1:79433468-79433487 | Msa0575540:CDS | 50.0% | |
| ! | AAGTCGTCGGAGGCATATTC+CGG | - | chr4_1:79433490-79433509 | None:intergenic | 50.0% |
| GTGGAAATCAGTGCTCCTGA+TGG | + | chr4_1:79434062-79434081 | Msa0575540:CDS | 50.0% | |
| GCTCCTGATGGTTACTCAAG+CGG | + | chr4_1:79434074-79434093 | Msa0575540:CDS | 50.0% | |
| TGGCATCCATGAGGATCAAC+TGG | + | chr4_1:79434980-79434999 | Msa0575540:CDS | 50.0% | |
| !!! | ATTTTGGGACCCGAGCTTAG+TGG | + | chr4_1:79435147-79435166 | Msa0575540:CDS | 50.0% |
| !! | CCCGAGCTTAGTGGATTAGT+TGG | + | chr4_1:79435156-79435175 | Msa0575540:CDS | 50.0% |
| TTTCGAAGGACAAGCTCCTC+AGG | - | chr4_1:79435264-79435283 | None:intergenic | 50.0% | |
| TAACAGCACCACATGGTTGG+TGG | - | chr4_1:79435570-79435589 | None:intergenic | 50.0% | |
| GTAGCCATGTCAACTGGATC+AGG | - | chr4_1:79435658-79435677 | None:intergenic | 50.0% | |
| GCTCAAGTGCATTCTCTGTG+TGG | + | chr4_1:79436259-79436278 | Msa0575540:CDS | 50.0% | |
| CCACAAGAGGTTGGAGACCA+GGG | - | chr4_1:79433080-79433099 | None:intergenic | 55.0% | |
| CACCCCGACGATCACTTGAT+CGG | + | chr4_1:79433443-79433462 | Msa0575540:CDS | 55.0% | |
| CAGCCGCTTGAGTAACCATC+AGG | - | chr4_1:79434080-79434099 | None:intergenic | 55.0% | |
| ! | GGCTGGTTATTCCCTTCTGC+AGG | + | chr4_1:79434681-79434700 | Msa0575540:CDS | 55.0% |
| GATGCATGCACTCTTGCCTG+AGG | + | chr4_1:79435245-79435264 | Msa0575540:CDS | 55.0% | |
| CCCTGGTCTCCAACCTCTTG+TGG | + | chr4_1:79433077-79433096 | Msa0575540:CDS | 60.0% | |
| GCCACAAGAGGTTGGAGACC+AGG | - | chr4_1:79433081-79433100 | None:intergenic | 60.0% | |
| CGATCAAGTGATCGTCGGGG+TGG | - | chr4_1:79433445-79433464 | None:intergenic | 60.0% | |
| GTTAGACCCTCACCCTGCAC+TGG | + | chr4_1:79433611-79433630 | Msa0575540:CDS | 60.0% | |
| TCCATGGGCCACCAACCATG+TGG | + | chr4_1:79435559-79435578 | Msa0575540:CDS | 60.0% | |
| !! | ACCACATGGTTGGTGGCCCA+TGG | - | chr4_1:79435563-79435582 | None:intergenic | 60.0% |
| AGACCCTCACCCTGCACTGG+TGG | + | chr4_1:79433614-79433633 | Msa0575540:CDS | 65.0% | |
| AGGCCACCAGTGCAGGGTGA+GGG | - | chr4_1:79433620-79433639 | None:intergenic | 65.0% | |
| GCTTCGAGGCCACCAGTGCA+GGG | - | chr4_1:79433626-79433645 | None:intergenic | 65.0% | |
| AGCTTCGAGGCCACCAGTGC+AGG | - | chr4_1:79433627-79433646 | None:intergenic | 65.0% | |
| GGGTGGTTGCACGTGCCTGC+CGG | - | chr4_1:79433428-79433447 | None:intergenic | 70.0% | |
| GAGGCCACCAGTGCAGGGTG+AGG | - | chr4_1:79433621-79433640 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 79433042 | 79436541 | 79433042 | ID=Msa0575540;Name=Msa0575540 |
| chr4_1 | mRNA | 79433042 | 79436541 | 79433042 | ID=Msa0575540-mRNA-1;Parent=Msa0575540;Name=Msa0575540-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.88|0.9|1|1|1|10|212|634 |
| chr4_1 | exon | 79433042 | 79433146 | 79433042 | ID=Msa0575540-mRNA-1:exon:28311;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79433260 | 79433520 | 79433260 | ID=Msa0575540-mRNA-1:exon:28312;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79433609 | 79433758 | 79433609 | ID=Msa0575540-mRNA-1:exon:28313;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79434062 | 79434195 | 79434062 | ID=Msa0575540-mRNA-1:exon:28314;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79434534 | 79434747 | 79434534 | ID=Msa0575540-mRNA-1:exon:28315;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79434856 | 79435001 | 79434856 | ID=Msa0575540-mRNA-1:exon:28316;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79435104 | 79435331 | 79435104 | ID=Msa0575540-mRNA-1:exon:28317;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79435483 | 79435685 | 79435483 | ID=Msa0575540-mRNA-1:exon:28318;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79435776 | 79436022 | 79435776 | ID=Msa0575540-mRNA-1:exon:28319;Parent=Msa0575540-mRNA-1 |
| chr4_1 | exon | 79436113 | 79436541 | 79436113 | ID=Msa0575540-mRNA-1:exon:28320;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79433042 | 79433146 | 79433042 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79433260 | 79433520 | 79433260 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79433609 | 79433758 | 79433609 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79434062 | 79434195 | 79434062 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79434534 | 79434747 | 79434534 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79434856 | 79435001 | 79434856 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79435104 | 79435331 | 79435104 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79435483 | 79435685 | 79435483 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79435776 | 79436022 | 79435776 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | CDS | 79436113 | 79436329 | 79436113 | ID=Msa0575540-mRNA-1:cds;Parent=Msa0575540-mRNA-1 |
| chr4_1 | three_prime_UTR | 79436330 | 79436541 | 79436330 | ID=Msa0575540-mRNA-1:three_prime_utr;Parent=Msa0575540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
