AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1119310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119310 MtrunA17_Chr7g0267851 88.685 327 14 1 1 327 1 304 0.0 585
Msa1119310 MtrunA17_Chr2g0322261 55.769 312 120 4 22 326 11 311 2.96e-110 325
Msa1119310 MtrunA17_Chr2g0287991 36.170 282 144 8 45 320 35 286 6.94e-44 154
Msa1119310 MtrunA17_Chr7g0248061 54.348 46 21 0 45 90 137 182 3.08e-12 64.3
Msa1119310 MtrunA17_Chr8g0387191 54.348 46 21 0 45 90 153 198 1.62e-11 62.8
Msa1119310 MtrunA17_Chr7g0220221 41.667 60 33 1 29 88 160 217 1.93e-11 63.2
Msa1119310 MtrunA17_Chr8g0348651 52.174 46 22 0 45 90 137 182 6.82e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119310 AT5G22000.2 50.641 312 131 4 23 326 8 304 6.11e-97 291
Msa1119310 AT5G22000.3 50.641 312 131 4 23 326 8 304 6.38e-97 291
Msa1119310 AT5G22000.1 50.641 312 131 4 23 326 8 304 6.38e-97 291
Msa1119310 AT5G22000.4 43.548 248 117 4 87 326 1 233 7.79e-51 171
Msa1119310 AT4G14220.1 31.944 288 171 6 33 320 31 293 1.82e-31 121
Msa1119310 AT4G00335.2 46.154 52 28 0 45 96 136 187 6.55e-11 61.2
Msa1119310 AT4G00335.1 46.154 52 28 0 45 96 136 187 6.55e-11 61.2
Msa1119310 AT4G00335.3 46.154 52 28 0 45 96 136 187 6.55e-11 61.2

Find 141 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATGACCTTTCTCTATTT+TGG 0.114320 7_3:+68157322 None:intergenic
CGCCCTACTCTTGGAGGTTT+TGG 0.127339 7_3:-68158118 Msa1119310:CDS
TGAGAGCTACAAACTTTCTT+AGG 0.150952 7_3:+68161319 Msa1119320:CDS
TTCATCAGTTGAACCTAAAA+TGG 0.166434 7_3:+68157814 None:intergenic
GGACTTTCAGTTTGACATTT+TGG 0.167995 7_3:+68157707 None:intergenic
TTCTATTCTATTTGAATTAC+TGG 0.186967 7_3:+68161908 Msa1119320:intron
AAAACTCCGGCGGCGATTTC+CGG 0.196054 7_3:-68161191 Msa1119310:five_prime_UTR
ATCCATGTGGATAAAGATTA+TGG 0.201767 7_3:+68161754 Msa1119320:intron
TTATGTTAACATCTTTCTTT+AGG 0.242283 7_3:-68156845 Msa1119310:three_prime_UTR
AGTTCGACCATGTCAGAATT+TGG 0.244465 7_3:-68157100 Msa1119310:CDS
TGGGATGCACTAGCAATTAT+AGG 0.270887 7_3:+68157053 None:intergenic
CATTGACACTGCATTGAGTT+TGG 0.273325 7_3:+68157269 None:intergenic
GTCTATATATATAGATTAAA+AGG 0.274096 7_3:-68160627 Msa1119310:five_prime_UTR
TCTTCTTCACTAGATGTTAT+TGG 0.283783 7_3:+68157746 None:intergenic
ACTGAAAGTCCCTCAACTTC+TGG 0.284506 7_3:-68157695 Msa1119310:CDS
TATCATTGGAGTAAGTTTCT+TGG 0.300253 7_3:+68157648 None:intergenic
TTGGTTCAAATTCTAGAAAA+AGG 0.303718 7_3:-68157081 Msa1119310:CDS
AGTTGCTTAACTTTAGCATT+AGG 0.307986 7_3:-68161663 Msa1119310:five_prime_UTR
CGCCTTGGTTTCCATCTTTG+AGG 0.321971 7_3:+68159660 None:intergenic
GTAGGATCTTTCAAGCTAAT+AGG 0.330819 7_3:+68158319 None:intergenic
CACTGGCTTCAACGCAATTT+CGG 0.341340 7_3:+68156935 None:intergenic
AAACTCCGGCGGCGATTTCC+GGG 0.345406 7_3:-68161190 Msa1119310:five_prime_UTR
GAACCATCCTCCAAATGATT+TGG 0.345962 7_3:+68156976 None:intergenic
GTCTTTCATCGCCCTACTCT+TGG 0.346696 7_3:-68158127 Msa1119310:CDS
ACATGAGAATCAACAAATTC+AGG 0.356616 7_3:-68161531 Msa1119310:five_prime_UTR
ACCATTCCAGGACGCATTGC+AGG 0.362971 7_3:+68159413 None:intergenic
TGGAGATAAGGAAGGGAGGA+AGG 0.378488 7_3:-68160552 Msa1119310:five_prime_UTR
TGTTATAGACCACCGCTTGC+CGG 0.387393 7_3:-68159447 Msa1119310:intron
GGGATGCACTAGCAATTATA+GGG 0.396776 7_3:+68157054 None:intergenic
GGAAAAGTGGGTCATAAGTT+TGG 0.399048 7_3:+68161600 Msa1119320:intron
TTGATCTATTTATGATTATG+AGG 0.400152 7_3:+68161938 Msa1119320:intron
CGCGCTGGCGCAGGAGGAGG+GGG 0.407883 7_3:-68161411 Msa1119310:five_prime_UTR
GATAAAAGAAATACCATTCC+AGG 0.418034 7_3:+68159401 None:intergenic
GATGTATTTAGCTTACAATA+AGG 0.427178 7_3:+68161806 Msa1119320:intron
AAAGTGAATATTACAGTTGA+AGG 0.437206 7_3:+68159535 None:intergenic
CAGCTACACATGGGCGTCAA+TGG 0.439815 7_3:-68157995 Msa1119310:CDS
AATTTGTTGATTCTCATGTC+AGG 0.439839 7_3:+68161535 Msa1119320:intron
TTTGATGAATTCCATTGATT+GGG 0.443007 7_3:+68157034 None:intergenic
TAAAATCAGTGAGGGAAAAG+TGG 0.445191 7_3:+68161587 Msa1119320:intron
CATTATCACAAAACTCTTCA+AGG 0.448344 7_3:+68159560 None:intergenic
GAGAGCTACAAACTTTCTTA+GGG 0.449124 7_3:+68161320 Msa1119320:CDS
GGTTCATAACCACCTATCAT+TGG 0.460752 7_3:+68157634 None:intergenic
TTTCAAATGGTACAAGGGGT+TGG 0.464012 7_3:-68157144 Msa1119310:CDS
AAGAAACTTACTCCAATGAT+AGG 0.464477 7_3:-68157646 Msa1119310:intron
TATTTATGATTATGAGGATG+TGG 0.464728 7_3:+68161944 Msa1119320:intron
TTAGCGATTGTTGCATCAAT+CGG 0.469150 7_3:-68157941 Msa1119310:CDS
GGACAACAAATTCGACCATC+TGG 0.470051 7_3:-68157890 Msa1119310:CDS
TTTCATCGCCCTACTCTTGG+AGG 0.471662 7_3:-68158124 Msa1119310:CDS
ACGCGCTGGCGCAGGAGGAG+GGG 0.474195 7_3:-68161412 Msa1119310:five_prime_UTR
TGCTAGTGCATCCCAATCAA+TGG 0.475980 7_3:-68157045 Msa1119310:three_prime_UTR
CAGTAGAACAAGAGAGAAAG+TGG 0.477805 7_3:-68158177 Msa1119310:CDS
ATTAGCTTGAAAGATCCTAC+TGG 0.480526 7_3:-68158316 Msa1119310:CDS
ATAGAAAGGGTAAGGAATGA+AGG 0.481753 7_3:+68160388 None:intergenic
GTTTCACCTGCAATGCGTCC+TGG 0.489130 7_3:-68159419 Msa1119310:CDS
TTGCCAACACATAGGACATT+GGG 0.490978 7_3:+68158342 None:intergenic
ATTGTCAAAGGCCTCAAAGA+TGG 0.491290 7_3:-68159671 Msa1119310:intron
GCAGAGTATCAGAAAATGAA+TGG 0.491541 7_3:+68157295 None:intergenic
ATATATAGACTGTATTCTGT+TGG 0.495203 7_3:+68160640 None:intergenic
TATAAAGAGTCAATTTCAAA+TGG 0.499844 7_3:-68157157 Msa1119310:CDS
ACCTGCAATGCGTCCTGGAA+TGG 0.503145 7_3:-68159414 Msa1119310:intron
CGCGTGATGTGTCTTCGCAC+TGG 0.505800 7_3:+68156918 None:intergenic
GCTCTAACGTTGTGGAGATA+AGG 0.508332 7_3:-68160564 Msa1119310:five_prime_UTR
AGATAAGGAAGGGAGGAAGG+AGG 0.516656 7_3:-68160549 Msa1119310:five_prime_UTR
GTACAAGGGGTTGGAAGGAG+AGG 0.516930 7_3:-68157135 Msa1119310:CDS
TTGGCCATTTGTTTCCGTGA+CGG 0.517363 7_3:+68157667 None:intergenic
TTTCCAAATCATTTGGAGGA+TGG 0.517475 7_3:-68156979 Msa1119310:three_prime_UTR
GACAGCATTTGCAGTGTCGC+CGG 0.519015 7_3:-68161370 Msa1119310:five_prime_UTR
TCAACCGTCACGGAAACAAA+TGG 0.523851 7_3:-68157671 Msa1119310:CDS
TTGGTGAGTTTGCTTTAACT+AGG 0.526510 7_3:+68161619 Msa1119320:intron
GTCAATTTCAAATGGTACAA+GGG 0.526606 7_3:-68157149 Msa1119310:CDS
CAATAGTCAAGAACTGTTTG+AGG 0.527587 7_3:-68158200 Msa1119310:intron
TGTTGATTTGAGAATAAGAA+GGG 0.534896 7_3:+68157854 None:intergenic
AAATATCTATATGAAAGAAA+AGG 0.535628 7_3:-68156752 Msa1119310:three_prime_UTR
AAGACATCAATATTCCTTGA+CGG 0.535688 7_3:+68158145 None:intergenic
AAATGGTACAAGGGGTTGGA+AGG 0.537898 7_3:-68157140 Msa1119310:CDS
GACGGTTGATCCAGAAGTTG+AGG 0.539227 7_3:+68157685 None:intergenic
ATCCAAAACCTCCAAGAGTA+GGG 0.541287 7_3:+68158116 None:intergenic
GATTAACTCAACTACTCGCC+CGG 0.541769 7_3:+68161172 Msa1119320:intron
TCGGTTGATTGCTTCTATCG+TGG 0.544377 7_3:+68156954 None:intergenic
AAACTCGTGCCGGCAAGCGG+TGG 0.544467 7_3:+68159438 None:intergenic
CAATAAACCAAAATAGAGAA+AGG 0.545182 7_3:-68157329 Msa1119310:CDS
AAACAGTTTCTCGGAATCGC+CGG 0.545357 7_3:+68161351 Msa1119320:CDS
TATATATAGATTAAAAGGCA+AGG 0.548706 7_3:-68160622 Msa1119310:five_prime_UTR
AAAGTGAAAACAAAACAAGT+TGG 0.549391 7_3:+68161150 Msa1119320:intron
GAACCTAAAATGGATGAAGA+AGG 0.550164 7_3:+68157824 None:intergenic
ATAAAAGCCGGTTTACGCGC+TGG 0.551760 7_3:-68161426 Msa1119310:five_prime_UTR
TAGAAAGGGTAAGGAATGAA+GGG 0.552848 7_3:+68160389 None:intergenic
AGAAATGCATCTATAAAAGC+CGG 0.552909 7_3:-68161438 Msa1119310:five_prime_UTR
GGTTTACGCGCTGGCGCAGG+AGG 0.553336 7_3:-68161417 Msa1119310:five_prime_UTR
ACTCGCCCGGAAATCGCCGC+CGG 0.556074 7_3:+68161185 Msa1119320:intron
AGTCAATTTCAAATGGTACA+AGG 0.558268 7_3:-68157150 Msa1119310:CDS
CACCATGTTGGTCGAAGGGA+AGG 0.559069 7_3:-68157911 Msa1119310:CDS
GTCCTTCCCTTCGACCAACA+TGG 0.559958 7_3:+68157909 None:intergenic
AATCCAAAACCTCCAAGAGT+AGG 0.560258 7_3:+68158115 None:intergenic
GGAGGAAGGAGGATTTATCA+AGG 0.567181 7_3:-68160538 Msa1119310:intron
CATCAATCAACAAAAGAATG+AGG 0.570616 7_3:+68160419 None:intergenic
AAAATCAGTGAGGGAAAAGT+GGG 0.571193 7_3:+68161588 Msa1119320:intron
GCTCCCAATGTCCTATGTGT+TGG 0.573320 7_3:-68158345 Msa1119310:CDS
TCTATTCTATTTGAATTACT+GGG 0.575184 7_3:+68161909 Msa1119320:intron
TCAATTTCAAATGGTACAAG+GGG 0.576916 7_3:-68157148 Msa1119310:CDS
TCAATAGTAGAAGAAACTGA+TGG 0.577721 7_3:+68156884 None:intergenic
GAACACACCATGTTGGTCGA+AGG 0.578887 7_3:-68157916 Msa1119310:CDS
GTTGCCAACACATAGGACAT+TGG 0.587109 7_3:+68158341 None:intergenic
GGCCTCAAAGATGGAAACCA+AGG 0.587642 7_3:-68159662 Msa1119310:CDS
AACCATAATCTTTATCCACA+TGG 0.588045 7_3:-68161756 Msa1119310:five_prime_UTR
ATGTTGATTTGAGAATAAGA+AGG 0.590502 7_3:+68157853 None:intergenic
ACGGTTGATCCAGAAGTTGA+GGG 0.590950 7_3:+68157686 None:intergenic
GTGAAACTCGTGCCGGCAAG+CGG 0.593105 7_3:+68159435 None:intergenic
AATAAAACATACCTTCGTTG+AGG 0.594994 7_3:+68160359 None:intergenic
ATTCGTTGTAAAATCAGTGA+GGG 0.595357 7_3:+68161579 Msa1119320:intron
ATATATAGATTAAAAGGCAA+GGG 0.595950 7_3:-68160621 Msa1119310:five_prime_UTR
TTTCGTTCAACAGCTACACA+TGG 0.598136 7_3:-68158005 Msa1119310:intron
AACACACCATGTTGGTCGAA+GGG 0.603686 7_3:-68157915 Msa1119310:CDS
AAAACAAACAAATTTGGTCA+AGG 0.603956 7_3:+68161493 Msa1119320:intron
TAACGTTGTGGAGATAAGGA+AGG 0.604670 7_3:-68160560 Msa1119310:five_prime_UTR
GTTGTGGAGATAAGGAAGGG+AGG 0.609221 7_3:-68160556 Msa1119310:five_prime_UTR
TTAGCTTGAAAGATCCTACT+GGG 0.609832 7_3:-68158315 Msa1119310:intron
ATGTTGTTGCTCTAACGTTG+TGG 0.610848 7_3:-68160572 Msa1119310:five_prime_UTR
AACTCAATGCAGTGTCAATG+AGG 0.616102 7_3:-68157266 Msa1119310:intron
GGTGGTTGACCATGACCAGA+TGG 0.618290 7_3:+68157875 None:intergenic
AACGTTGTGGAGATAAGGAA+GGG 0.619860 7_3:-68160559 Msa1119310:five_prime_UTR
AACTTCTGGATCAACCGTCA+CGG 0.620578 7_3:-68157681 Msa1119310:CDS
TCTCATGTCAGGATTTACAA+TGG 0.621399 7_3:+68161546 Msa1119320:intron
ATTTGAACCAAATTCTGACA+TGG 0.622289 7_3:+68157093 None:intergenic
TGCAGTTATTTACATCCATG+TGG 0.625121 7_3:+68161741 Msa1119320:intron
TGATTGATGTTGAATCAAGC+GGG 0.626336 7_3:+68161852 Msa1119320:intron
AGAACAAGAGAGAAAGTGGA+GGG 0.629551 7_3:-68158173 Msa1119310:CDS
TTCGTTCAACAGCTACACAT+GGG 0.632627 7_3:-68158004 Msa1119310:intron
CAAATTCGACCATCTGGTCA+TGG 0.633887 7_3:-68157884 Msa1119310:CDS
ATTGCAGGTGAAACTCGTGC+CGG 0.635125 7_3:+68159428 None:intergenic
TTGATTGATGTTGAATCAAG+CGG 0.637430 7_3:+68161851 Msa1119320:intron
AGTGGAGGGTTACTCCGTCA+AGG 0.637839 7_3:-68158159 Msa1119310:CDS
CTAATAGGTTGCCAACACAT+AGG 0.640955 7_3:+68158334 None:intergenic
ATCGGAAGAACACACCATGT+TGG 0.642131 7_3:-68157923 Msa1119310:CDS
AAATTCATGACCAACCCAGT+AGG 0.663616 7_3:+68158301 None:intergenic
AAATCATATGACATCAGCTG+CGG 0.669781 7_3:-68159635 Msa1119310:CDS
TAGAACAAGAGAGAAAGTGG+AGG 0.671560 7_3:-68158174 Msa1119310:CDS
TGATTTGAGAATAAGAAGGG+TGG 0.676918 7_3:+68157857 None:intergenic
AGAAAGGGTAAGGAATGAAG+GGG 0.677639 7_3:+68160390 None:intergenic
CATTCGTTGTAAAATCAGTG+AGG 0.678142 7_3:+68161578 Msa1119320:intron
CTCAAAGATGGAAACCAAGG+CGG 0.690040 7_3:-68159659 Msa1119310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAACTTTTTTTTTTTTGA+AGG - chr7_3:68157820-68157839 Msa1119310:CDS 10.0%
!! AAAAAAAAAAAAATTATGCA+TGG + chr7_3:68157907-68157926 None:intergenic 10.0%
!!! TTTTACATTTAAATTTTATC+TGG - chr7_3:68158404-68158423 Msa1119310:intron 10.0%
!!! TTTTAGGAAATTGATTTTAT+GGG + chr7_3:68156982-68157001 None:intergenic 15.0%
!!! TGAAAATTTTACATTTGAAT+AGG + chr7_3:68157397-68157416 None:intergenic 15.0%
!! TTCAAAATGAGAAAAATATT+GGG - chr7_3:68157583-68157602 Msa1119310:intron 15.0%
!!! CTTATTTAACATATTTTGAT+TGG - chr7_3:68157853-68157872 Msa1119310:CDS 15.0%
!!! TAACCTCTTTTTTTTTTTTT+TGG + chr7_3:68158005-68158024 None:intergenic 15.0%
!! GTCTATATATATAGATTAAA+AGG - chr7_3:68158058-68158077 Msa1119310:intron 15.0%
!! AGAAAATGTATAGATAATAA+AGG + chr7_3:68158194-68158213 None:intergenic 15.0%
!! ACAATATTATTAAGAAATGA+TGG + chr7_3:68158223-68158242 None:intergenic 15.0%
!! ATATAACTACAACAATTTAT+TGG - chr7_3:68158496-68158515 Msa1119310:intron 15.0%
!! AGAGATACAAATTAAAATTT+AGG + chr7_3:68159709-68159728 None:intergenic 15.0%
!!! TGAAATTACATTTTTATGTT+AGG + chr7_3:68159905-68159924 None:intergenic 15.0%
!!! TTTAAAGCCAAAATAATATT+AGG + chr7_3:68160108-68160127 None:intergenic 15.0%
!! TTAACATGTAATTAGATATA+TGG + chr7_3:68160236-68160255 None:intergenic 15.0%
!!! ATCTATGTATTTTATCAAAT+CGG - chr7_3:68161475-68161494 Msa1119310:five_prime_UTR 15.0%
!!! ATAGTACATGAAATTTTTTA+AGG + chr7_3:68161905-68161924 Msa1119320:intron 15.0%
!! AAATATCTATATGAAAGAAA+AGG - chr7_3:68161933-68161952 Msa1119310:five_prime_UTR 15.0%
!! TTGATCTATTTATGATTATG+AGG + chr7_3:68156750-68156769 None:intergenic 20.0%
!! TCTATTCTATTTGAATTACT+GGG + chr7_3:68156779-68156798 None:intergenic 20.0%
!! TTCTATTCTATTTGAATTAC+TGG + chr7_3:68156780-68156799 None:intergenic 20.0%
!!! CTTTTAGGAAATTGATTTTA+TGG + chr7_3:68156983-68157002 None:intergenic 20.0%
!!! AAAAAGAAGTGATTTCTTTT+AGG + chr7_3:68156998-68157017 None:intergenic 20.0%
!!! TTCTGAAAAACAAACAAATT+TGG + chr7_3:68157201-68157220 None:intergenic 20.0%
!!! ATATTTTTCTCATTTTGAAG+AGG + chr7_3:68157582-68157601 None:intergenic 20.0%
!! CTTCAAAATGAGAAAAATAT+TGG - chr7_3:68157582-68157601 Msa1119310:intron 20.0%
!! AAAAAAAAATTATGCATGGT+CGG + chr7_3:68157903-68157922 None:intergenic 20.0%
!!! TTTTTTTTTTTGGTACAATG+AGG + chr7_3:68157995-68158014 None:intergenic 20.0%
!! GTACCAAAAAAAAAAAAAAG+AGG - chr7_3:68157999-68158018 Msa1119310:intron 20.0%
!! TATATATAGATTAAAAGGCA+AGG - chr7_3:68158063-68158082 Msa1119310:intron 20.0%
!! ATATATAGATTAAAAGGCAA+GGG - chr7_3:68158064-68158083 Msa1119310:intron 20.0%
!! ATTATAACTTCAAATGATCA+AGG - chr7_3:68158375-68158394 Msa1119310:intron 20.0%
!!! ATTTAAATTTTATCTGGAGT+TGG - chr7_3:68158410-68158429 Msa1119310:intron 20.0%
!! TAATATATTGTGTACAAAAG+AGG + chr7_3:68158968-68158987 None:intergenic 20.0%
!! CAATATATTATGTTTAACTC+TGG - chr7_3:68158978-68158997 Msa1119310:intron 20.0%
!! AAAGTTATTTGAAGAACATT+TGG - chr7_3:68159194-68159213 Msa1119310:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr7_3:68159361-68159380 Msa1119310:intron 20.0%
!!! TTAAAATTTAGGCTTTGTTT+GGG + chr7_3:68159698-68159717 None:intergenic 20.0%
!!! ATTAAAATTTAGGCTTTGTT+TGG + chr7_3:68159699-68159718 None:intergenic 20.0%
!!! TAATTTTTGCGAAGAAATAT+AGG + chr7_3:68161075-68161094 Msa1119320:intron 20.0%
!!! ACTTGAATTTTTTTTAGATG+TGG + chr7_3:68161116-68161135 Msa1119320:intron 20.0%
!!! TTTCTCTATTTTGGTTTATT+GGG + chr7_3:68161357-68161376 Msa1119320:CDS 20.0%
!! TATAAAGAGTCAATTTCAAA+TGG - chr7_3:68161528-68161547 Msa1119310:five_prime_UTR 20.0%
!!! TACTTATTTTCCAAATCATT+TGG - chr7_3:68161699-68161718 Msa1119310:five_prime_UTR 20.0%
!! TTATGTTAACATCTTTCTTT+AGG - chr7_3:68161840-68161859 Msa1119310:five_prime_UTR 20.0%
! TATTTATGATTATGAGGATG+TGG + chr7_3:68156744-68156763 None:intergenic 25.0%
!! GATGTATTTAGCTTACAATA+AGG + chr7_3:68156882-68156901 None:intergenic 25.0%
! AAAACAAACAAATTTGGTCA+AGG + chr7_3:68157195-68157214 None:intergenic 25.0%
! AAAGTGAAAACAAAACAAGT+TGG + chr7_3:68157538-68157557 None:intergenic 25.0%
!!! TTGTTTTGTTTTCACTTTCA+CGG - chr7_3:68157540-68157559 Msa1119310:intron 25.0%
! TTTCACGGTAAAGTAAATTA+TGG - chr7_3:68157555-68157574 Msa1119310:intron 25.0%
! TTCACGGTAAAGTAAATTAT+GGG - chr7_3:68157556-68157575 Msa1119310:intron 25.0%
!! TCTTTAAAAGAAATACTCGT+AGG + chr7_3:68157669-68157688 None:intergenic 25.0%
! TTAGAGTGTAATTAATTGTG+AGG - chr7_3:68157696-68157715 Msa1119310:CDS 25.0%
! ATATATAGACTGTATTCTGT+TGG + chr7_3:68158048-68158067 None:intergenic 25.0%
! GTTGAGGAAAAATATAGAAA+GGG + chr7_3:68158313-68158332 None:intergenic 25.0%
! ACTACAACAATTTAGAGAAA+GGG + chr7_3:68158465-68158484 None:intergenic 25.0%
! AACTACAACAATTTAGAGAA+AGG + chr7_3:68158466-68158485 None:intergenic 25.0%
! CTATGATTAAGATCATATCA+GGG + chr7_3:68158721-68158740 None:intergenic 25.0%
! ACTATGATTAAGATCATATC+AGG + chr7_3:68158722-68158741 None:intergenic 25.0%
! TTATAGATGATCTTCATGTT+TGG - chr7_3:68158770-68158789 Msa1119310:intron 25.0%
!!! TTATCGATTTTACCCAAAAT+TGG + chr7_3:68158848-68158867 None:intergenic 25.0%
! ATAATCATCGACAAAAATTC+AGG + chr7_3:68158893-68158912 None:intergenic 25.0%
! AAAGTGAATATTACAGTTGA+AGG + chr7_3:68159153-68159172 None:intergenic 25.0%
! GAACTCAAAAATTGTATTGA+GGG + chr7_3:68159538-68159557 None:intergenic 25.0%
! ATAAAAAATCTCCCTCATTT+GGG + chr7_3:68159562-68159581 None:intergenic 25.0%
! AATAAAAAATCTCCCTCATT+TGG + chr7_3:68159563-68159582 None:intergenic 25.0%
! AAGAAAATTTGAAGGTCTTA+GGG + chr7_3:68159817-68159836 None:intergenic 25.0%
! AAAGAAAATTTGAAGGTCTT+AGG + chr7_3:68159818-68159837 None:intergenic 25.0%
! TTTGGCAAAAGAAAATTTGA+AGG + chr7_3:68159825-68159844 None:intergenic 25.0%
! TGTATAATGTATTGTTACGA+GGG + chr7_3:68159864-68159883 None:intergenic 25.0%
! ATGTATAATGTATTGTTACG+AGG + chr7_3:68159865-68159884 None:intergenic 25.0%
! AAGCCAAAATAATATTAGGA+AGG + chr7_3:68160104-68160123 None:intergenic 25.0%
!!! TGTTGATTTGAGAATAAGAA+GGG + chr7_3:68160834-68160853 None:intergenic 25.0%
!!! ATGTTGATTTGAGAATAAGA+AGG + chr7_3:68160835-68160854 None:intergenic 25.0%
!!! CATTTTGGTATTTGTTGTAA+TGG + chr7_3:68160966-68160985 None:intergenic 25.0%
! TGTTTATTCTACCAATATTC+TGG - chr7_3:68161195-68161214 Msa1119310:five_prime_UTR 25.0%
! TGTTCTAACAATAGATAGTA+TGG - chr7_3:68161224-68161243 Msa1119310:intron 25.0%
!! ATGAATCATTATTGATTGTG+TGG - chr7_3:68161267-68161286 Msa1119310:intron 25.0%
!!! TTCTCTATTTTGGTTTATTG+GGG + chr7_3:68161356-68161375 Msa1119320:CDS 25.0%
!!! CTTTCTCTATTTTGGTTTAT+TGG + chr7_3:68161358-68161377 Msa1119320:CDS 25.0%
! CAATAAACCAAAATAGAGAA+AGG - chr7_3:68161356-68161375 Msa1119310:five_prime_UTR 25.0%
!! TTGGTTCAAATTCTAGAAAA+AGG - chr7_3:68161604-68161623 Msa1119310:five_prime_UTR 25.0%
!! TTTGATGAATTCCATTGATT+GGG + chr7_3:68161654-68161673 Msa1119320:intron 25.0%
!! TTTTGATGAATTCCATTGAT+TGG + chr7_3:68161655-68161674 Msa1119320:intron 25.0%
!! TTATTTTCCAAATCATTTGG+AGG - chr7_3:68161702-68161721 Msa1119310:five_prime_UTR 25.0%
TTGATTGATGTTGAATCAAG+CGG + chr7_3:68156837-68156856 None:intergenic 30.0%
AACCATAATCTTTATCCACA+TGG - chr7_3:68156929-68156948 Msa1119310:three_prime_UTR 30.0%
ATCCATGTGGATAAAGATTA+TGG + chr7_3:68156934-68156953 None:intergenic 30.0%
AGTTGCTTAACTTTAGCATT+AGG - chr7_3:68157022-68157041 Msa1119310:three_prime_UTR 30.0%
ATTCGTTGTAAAATCAGTGA+GGG + chr7_3:68157109-68157128 None:intergenic 30.0%
!! ACTGATTTTACAACGAATGA+AGG - chr7_3:68157111-68157130 Msa1119310:CDS 30.0%
!! AATTTGTTGATTCTCATGTC+AGG + chr7_3:68157153-68157172 None:intergenic 30.0%
ACATGAGAATCAACAAATTC+AGG - chr7_3:68157154-68157173 Msa1119310:CDS 30.0%
!! TGTTTGTTTTTCAGAAGTTC+AGG - chr7_3:68157205-68157224 Msa1119310:intron 30.0%
AGAAATGCATCTATAAAAGC+CGG - chr7_3:68157247-68157266 Msa1119310:intron 30.0%
!! GTTTTGAACAAACAGTTTCT+CGG + chr7_3:68157346-68157365 None:intergenic 30.0%
TGAAAATGAGAACCAAAACA+AGG - chr7_3:68157431-68157450 Msa1119310:intron 30.0%
AATTTGTCACTGAAAAACTC+CGG - chr7_3:68157481-68157500 Msa1119310:intron 30.0%
AATGAGAAAAATATTGGGCT+TGG - chr7_3:68157588-68157607 Msa1119310:intron 30.0%
!! GGGAACAAAAAGTTTGTTTT+TGG - chr7_3:68158084-68158103 Msa1119310:intron 30.0%
CATCAATCAACAAAAGAATG+AGG + chr7_3:68158269-68158288 None:intergenic 30.0%
GGAAAAATATAGAAAGGGTA+AGG + chr7_3:68158308-68158327 None:intergenic 30.0%
CGTTGAGGAAAAATATAGAA+AGG + chr7_3:68158314-68158333 None:intergenic 30.0%
! TCTATATTTTTCCTCAACGA+AGG - chr7_3:68158315-68158334 Msa1119310:intron 30.0%
AATAAAACATACCTTCGTTG+AGG + chr7_3:68158329-68158348 None:intergenic 30.0%
CTACAACAATTTAGAGAAAG+GGG + chr7_3:68158464-68158483 None:intergenic 30.0%
AGATGGAAATCTAAATGGTA+AGG + chr7_3:68158522-68158541 None:intergenic 30.0%
AGACAAGATGGAAATCTAAA+TGG + chr7_3:68158527-68158546 None:intergenic 30.0%
ATCATTCGTTAACAATTGTC+TGG + chr7_3:68158558-68158577 None:intergenic 30.0%
TGAAGATATTACTCAAAACG+TGG - chr7_3:68158621-68158640 Msa1119310:intron 30.0%
TCCATGATTAATTCACAACA+TGG - chr7_3:68158650-68158669 Msa1119310:intron 30.0%
TCCATGTTGTGAATTAATCA+TGG + chr7_3:68158654-68158673 None:intergenic 30.0%
ATTATGTTTAACTCTGGTGT+TGG - chr7_3:68158984-68159003 Msa1119310:intron 30.0%
CATTATCACAAAACTCTTCA+AGG + chr7_3:68159128-68159147 None:intergenic 30.0%
GATAAAAGAAATACCATTCC+AGG + chr7_3:68159287-68159306 None:intergenic 30.0%
! GGTATTTCTTTTATCCACTA+AGG - chr7_3:68159292-68159311 Msa1119310:intron 30.0%
TCAAAAATTGTATTGAGGGA+GGG + chr7_3:68159534-68159553 None:intergenic 30.0%
GGAACTCAAAAATTGTATTG+AGG + chr7_3:68159539-68159558 None:intergenic 30.0%
TAAAAAATCTCCCTCATTTG+GGG + chr7_3:68159561-68159580 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr7_3:68159620-68159639 None:intergenic 30.0%
ACTTATTCAATAGTGTGAAC+TGG - chr7_3:68159983-68160002 Msa1119310:intron 30.0%
! CATGATTTTTGTCAATGTTG+AGG - chr7_3:68160032-68160051 Msa1119310:intron 30.0%
! AGGCCTTCCTAATATTATTT+TGG - chr7_3:68160098-68160117 Msa1119310:intron 30.0%
! ACAAATCCTTATTGATTGTG+TGG - chr7_3:68160135-68160154 Msa1119310:intron 30.0%
! TGTTACTTGCTCTTATTTGT+AGG - chr7_3:68160307-68160326 Msa1119310:intron 30.0%
AAGACATCAATATTCCTTGA+CGG + chr7_3:68160543-68160562 None:intergenic 30.0%
TTCATCAGTTGAACCTAAAA+TGG + chr7_3:68160874-68160893 None:intergenic 30.0%
TCTTCTTCACTAGATGTTAT+TGG + chr7_3:68160942-68160961 None:intergenic 30.0%
TATCATTGGAGTAAGTTTCT+TGG + chr7_3:68161040-68161059 None:intergenic 30.0%
AAGAAACTTACTCCAATGAT+AGG - chr7_3:68161039-68161058 Msa1119310:intron 30.0%
GAACAATAACTCCAGAATAT+TGG + chr7_3:68161209-68161228 Msa1119320:intron 30.0%
! ATTCATTTTCTGATACTCTG+CGG - chr7_3:68161392-68161411 Msa1119310:five_prime_UTR 30.0%
AGTCAATTTCAAATGGTACA+AGG - chr7_3:68161535-68161554 Msa1119310:five_prime_UTR 30.0%
GTCAATTTCAAATGGTACAA+GGG - chr7_3:68161536-68161555 Msa1119310:five_prime_UTR 30.0%
TCAATTTCAAATGGTACAAG+GGG - chr7_3:68161537-68161556 Msa1119310:five_prime_UTR 30.0%
ATTTGAACCAAATTCTGACA+TGG + chr7_3:68161595-68161614 Msa1119320:intron 30.0%
TCAATAGTAGAAGAAACTGA+TGG + chr7_3:68161804-68161823 Msa1119320:intron 30.0%
TGATTGATGTTGAATCAAGC+GGG + chr7_3:68156836-68156855 None:intergenic 35.0%
TGCAGTTATTTACATCCATG+TGG + chr7_3:68156947-68156966 None:intergenic 35.0%
! TTGGTGAGTTTGCTTTAACT+AGG + chr7_3:68157069-68157088 None:intergenic 35.0%
AAAATCAGTGAGGGAAAAGT+GGG + chr7_3:68157100-68157119 None:intergenic 35.0%
TAAAATCAGTGAGGGAAAAG+TGG + chr7_3:68157101-68157120 None:intergenic 35.0%
CATTCGTTGTAAAATCAGTG+AGG + chr7_3:68157110-68157129 None:intergenic 35.0%
TCTCATGTCAGGATTTACAA+TGG + chr7_3:68157142-68157161 None:intergenic 35.0%
GAGAGCTACAAACTTTCTTA+GGG + chr7_3:68157368-68157387 None:intergenic 35.0%
TGAGAGCTACAAACTTTCTT+AGG + chr7_3:68157369-68157388 None:intergenic 35.0%
!! TCTTCTTCATCACCTTGTTT+TGG + chr7_3:68157446-68157465 None:intergenic 35.0%
GATGAAGAAGAAAGAAAACC+TGG - chr7_3:68157455-68157474 Msa1119310:intron 35.0%
TTTCAGTGACAAATTCATCC+AGG + chr7_3:68157476-68157495 None:intergenic 35.0%
GAGTGTAATTAATTGTGAGG+TGG - chr7_3:68157699-68157718 Msa1119310:CDS 35.0%
AATCAACAAAAGAATGAGGC+TGG + chr7_3:68158265-68158284 None:intergenic 35.0%
TAGAAAGGGTAAGGAATGAA+GGG + chr7_3:68158299-68158318 None:intergenic 35.0%
ATAGAAAGGGTAAGGAATGA+AGG + chr7_3:68158300-68158319 None:intergenic 35.0%
TAGATGATCTTCATGTTTGG+TGG - chr7_3:68158773-68158792 Msa1119310:intron 35.0%
AGATGATCTTCATGTTTGGT+GGG - chr7_3:68158774-68158793 Msa1119310:intron 35.0%
! TTGCTTGTTTCTTAGTTCAC+TGG - chr7_3:68158822-68158841 Msa1119310:intron 35.0%
! TTAGTTCACTGGCCAATTTT+GGG - chr7_3:68158833-68158852 Msa1119310:intron 35.0%
AAATCATATGACATCAGCTG+CGG - chr7_3:68159050-68159069 Msa1119310:intron 35.0%
!! TAAGGCTTTGTTTGAGAGTT+TGG - chr7_3:68159310-68159329 Msa1119310:intron 35.0%
CTCAAAAATTGTATTGAGGG+AGG + chr7_3:68159535-68159554 None:intergenic 35.0%
AAAAAATCTCCCTCATTTGG+GGG + chr7_3:68159560-68159579 None:intergenic 35.0%
AAGAAATAGAAGACATTGGG+AGG + chr7_3:68159617-68159636 None:intergenic 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr7_3:68159621-68159640 None:intergenic 35.0%
AATATGGTAGGAAAAAAGGC+TGG + chr7_3:68159770-68159789 None:intergenic 35.0%
TGGGAATATGGTAGGAAAAA+AGG + chr7_3:68159774-68159793 None:intergenic 35.0%
AAATTTGAAGGTCTTAGGGT+AGG + chr7_3:68159813-68159832 None:intergenic 35.0%
! TTTCTTTTGCCAAAACATGC+AGG - chr7_3:68159831-68159850 Msa1119310:intron 35.0%
TCATGCATGACAAAAAACAC+AGG + chr7_3:68160017-68160036 None:intergenic 35.0%
! TGACTTGTGATCTAAGAACT+AGG - chr7_3:68160078-68160097 Msa1119310:intron 35.0%
TCTAGACCACACAATCAATA+AGG + chr7_3:68160144-68160163 None:intergenic 35.0%
! GATTGTGTGGTCTAGATTTT+TGG - chr7_3:68160148-68160167 Msa1119310:intron 35.0%
!!! GTGGTCTAGATTTTTGGTAT+AGG - chr7_3:68160154-68160173 Msa1119310:intron 35.0%
GTAGGATCTTTCAAGCTAAT+AGG + chr7_3:68160369-68160388 None:intergenic 35.0%
! ATTAGCTTGAAAGATCCTAC+TGG - chr7_3:68160369-68160388 Msa1119310:intron 35.0%
! TTAGCTTGAAAGATCCTACT+GGG - chr7_3:68160370-68160389 Msa1119310:intron 35.0%
CAATAGTCAAGAACTGTTTG+AGG - chr7_3:68160485-68160504 Msa1119310:intron 35.0%
TTAGCGATTGTTGCATCAAT+CGG - chr7_3:68160744-68160763 Msa1119310:intron 35.0%
TGATTTGAGAATAAGAAGGG+TGG + chr7_3:68160831-68160850 None:intergenic 35.0%
GAACCTAAAATGGATGAAGA+AGG + chr7_3:68160864-68160883 None:intergenic 35.0%
! GGACTTTCAGTTTGACATTT+TGG + chr7_3:68160981-68161000 None:intergenic 35.0%
AAACTTACTCCAATGATAGG+TGG - chr7_3:68161042-68161061 Msa1119310:intron 35.0%
! CTGATGACCTTTCTCTATTT+TGG + chr7_3:68161366-68161385 Msa1119320:CDS 35.0%
! GCAGAGTATCAGAAAATGAA+TGG + chr7_3:68161393-68161412 Msa1119320:CDS 35.0%
TTTCCAAATCATTTGGAGGA+TGG - chr7_3:68161706-68161725 Msa1119310:five_prime_UTR 35.0%
GGAAAAGTGGGTCATAAGTT+TGG + chr7_3:68157088-68157107 None:intergenic 40.0%
ATGTTGTTGCTCTAACGTTG+TGG - chr7_3:68158113-68158132 Msa1119310:CDS 40.0%
TAACGTTGTGGAGATAAGGA+AGG - chr7_3:68158125-68158144 Msa1119310:CDS 40.0%
AACGTTGTGGAGATAAGGAA+GGG - chr7_3:68158126-68158145 Msa1119310:CDS 40.0%
AGAAAGGGTAAGGAATGAAG+GGG + chr7_3:68158298-68158317 None:intergenic 40.0%
CTGGAAAACAACAGACAAGA+TGG + chr7_3:68158539-68158558 None:intergenic 40.0%
! GATGATCTTCATGTTTGGTG+GGG - chr7_3:68158775-68158794 Msa1119310:intron 40.0%
! CTTAGTTCACTGGCCAATTT+TGG - chr7_3:68158832-68158851 Msa1119310:intron 40.0%
! ATGTTTAACTCTGGTGTTGG+TGG - chr7_3:68158987-68159006 Msa1119310:intron 40.0%
!! GTTGGTGGACTAATTGTCAA+AGG - chr7_3:68159002-68159021 Msa1119310:intron 40.0%
ATTGTCAAAGGCCTCAAAGA+TGG - chr7_3:68159014-68159033 Msa1119310:intron 40.0%
! TGTCATATGATTTTCCGCCT+TGG + chr7_3:68159043-68159062 None:intergenic 40.0%
ACTCTCAAACAAAGCCTTAG+TGG + chr7_3:68159309-68159328 None:intergenic 40.0%
!! GCTTTGTTTGAGAGTTTGGA+GGG - chr7_3:68159314-68159333 Msa1119310:intron 40.0%
! CTTTGTTTGAGAGTTTGGAG+GGG - chr7_3:68159315-68159334 Msa1119310:intron 40.0%
! TTGTATTGAGGGAGGGTTTT+GGG + chr7_3:68159527-68159546 None:intergenic 40.0%
! ATTGTATTGAGGGAGGGTTT+TGG + chr7_3:68159528-68159547 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr7_3:68159547-68159566 Msa1119310:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr7_3:68159548-68159567 Msa1119310:intron 40.0%
! GAGGGTTTTGCAAAAAAGGA+AGG + chr7_3:68159649-68159668 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr7_3:68159691-68159710 None:intergenic 40.0%
TTGCCAACACATAGGACATT+GGG + chr7_3:68160346-68160365 None:intergenic 40.0%
CTAATAGGTTGCCAACACAT+AGG + chr7_3:68160354-68160373 None:intergenic 40.0%
AAATTCATGACCAACCCAGT+AGG + chr7_3:68160387-68160406 None:intergenic 40.0%
CAGTAGAACAAGAGAGAAAG+TGG - chr7_3:68160508-68160527 Msa1119310:intron 40.0%
TAGAACAAGAGAGAAAGTGG+AGG - chr7_3:68160511-68160530 Msa1119310:intron 40.0%
AGAACAAGAGAGAAAGTGGA+GGG - chr7_3:68160512-68160531 Msa1119310:intron 40.0%
ATCCAAAACCTCCAAGAGTA+GGG + chr7_3:68160572-68160591 None:intergenic 40.0%
AATCCAAAACCTCCAAGAGT+AGG + chr7_3:68160573-68160592 None:intergenic 40.0%
TTTCGTTCAACAGCTACACA+TGG - chr7_3:68160680-68160699 Msa1119310:intron 40.0%
TTCGTTCAACAGCTACACAT+GGG - chr7_3:68160681-68160700 Msa1119310:intron 40.0%
! GCACCTTCTTCATCCATTTT+AGG - chr7_3:68160858-68160877 Msa1119310:intron 40.0%
GGTTCATAACCACCTATCAT+TGG + chr7_3:68161054-68161073 None:intergenic 40.0%
CATTGACACTGCATTGAGTT+TGG + chr7_3:68161419-68161438 Msa1119320:intron 40.0%
AACTCAATGCAGTGTCAATG+AGG - chr7_3:68161419-68161438 Msa1119310:five_prime_UTR 40.0%
TTTCAAATGGTACAAGGGGT+TGG - chr7_3:68161541-68161560 Msa1119310:five_prime_UTR 40.0%
AGTTCGACCATGTCAGAATT+TGG - chr7_3:68161585-68161604 Msa1119310:five_prime_UTR 40.0%
GGGATGCACTAGCAATTATA+GGG + chr7_3:68161634-68161653 Msa1119320:intron 40.0%
TGGGATGCACTAGCAATTAT+AGG + chr7_3:68161635-68161654 Msa1119320:intron 40.0%
GAACCATCCTCCAAATGATT+TGG + chr7_3:68161712-68161731 Msa1119320:intron 40.0%
AAACAGTTTCTCGGAATCGC+CGG + chr7_3:68157337-68157356 None:intergenic 45.0%
TTGTCACTGAAAAACTCCGG+CGG - chr7_3:68157484-68157503 Msa1119310:intron 45.0%
GATTAACTCAACTACTCGCC+CGG + chr7_3:68157516-68157535 None:intergenic 45.0%
GCTCTAACGTTGTGGAGATA+AGG - chr7_3:68158121-68158140 Msa1119310:CDS 45.0%
GGAGGAAGGAGGATTTATCA+AGG - chr7_3:68158147-68158166 Msa1119310:CDS 45.0%
CTCAAAGATGGAAACCAAGG+CGG - chr7_3:68159026-68159045 Msa1119310:intron 45.0%
!! GGCTTTGTTTGAGAGTTTGG+AGG - chr7_3:68159313-68159332 Msa1119310:intron 45.0%
TTTGAGAGTTTGGAGGGGAA+GGG - chr7_3:68159320-68159339 Msa1119310:intron 45.0%
! TGTATTGAGGGAGGGTTTTG+GGG + chr7_3:68159526-68159545 None:intergenic 45.0%
TAGAAGACATTGGGAGGAGA+GGG + chr7_3:68159611-68159630 None:intergenic 45.0%
ATAGAAGACATTGGGAGGAG+AGG + chr7_3:68159612-68159631 None:intergenic 45.0%
GCAAAAAAGGAAGGAGCAAG+TGG + chr7_3:68159640-68159659 None:intergenic 45.0%
! AGGGGAGGGTTTTGCAAAAA+AGG + chr7_3:68159653-68159672 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr7_3:68159686-68159705 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr7_3:68159687-68159706 None:intergenic 45.0%
! TAGCTTGGTGGGAATATGGT+AGG + chr7_3:68159782-68159801 None:intergenic 45.0%
!! AGGTTTTGCACTAGCTTGGT+GGG + chr7_3:68159793-68159812 None:intergenic 45.0%
!! TAGGTTTTGCACTAGCTTGG+TGG + chr7_3:68159794-68159813 None:intergenic 45.0%
! GGATTGAGACCTGCATGTTT+TGG + chr7_3:68159843-68159862 None:intergenic 45.0%
AGGTCATTGTTCACTACCGT+TGG - chr7_3:68160052-68160071 Msa1119310:intron 45.0%
AGATCACAAGTCACGACCAA+CGG + chr7_3:68160071-68160090 None:intergenic 45.0%
GTTGCCAACACATAGGACAT+TGG + chr7_3:68160347-68160366 None:intergenic 45.0%
CTTGAAAGATCCTACTGGGT+TGG - chr7_3:68160374-68160393 Msa1119310:CDS 45.0%
ATCGGAAGAACACACCATGT+TGG - chr7_3:68160762-68160781 Msa1119310:intron 45.0%
AACACACCATGTTGGTCGAA+GGG - chr7_3:68160770-68160789 Msa1119310:intron 45.0%
GGACAACAAATTCGACCATC+TGG - chr7_3:68160795-68160814 Msa1119310:intron 45.0%
CAAATTCGACCATCTGGTCA+TGG - chr7_3:68160801-68160820 Msa1119310:intron 45.0%
ACTGAAAGTCCCTCAACTTC+TGG - chr7_3:68160990-68161009 Msa1119310:intron 45.0%
ACGGTTGATCCAGAAGTTGA+GGG + chr7_3:68161002-68161021 None:intergenic 45.0%
AACTTCTGGATCAACCGTCA+CGG - chr7_3:68161004-68161023 Msa1119310:intron 45.0%
TCAACCGTCACGGAAACAAA+TGG - chr7_3:68161014-68161033 Msa1119310:intron 45.0%
TTGGCCATTTGTTTCCGTGA+CGG + chr7_3:68161021-68161040 None:intergenic 45.0%
!! TAGATGTGGTTCTAGCACAG+AGG + chr7_3:68161102-68161121 Msa1119320:intron 45.0%
AAATGGTACAAGGGGTTGGA+AGG - chr7_3:68161545-68161564 Msa1119310:five_prime_UTR 45.0%
TGCTAGTGCATCCCAATCAA+TGG - chr7_3:68161640-68161659 Msa1119310:five_prime_UTR 45.0%
TCGGTTGATTGCTTCTATCG+TGG + chr7_3:68161734-68161753 Msa1119320:intron 45.0%
!! CACTGGCTTCAACGCAATTT+CGG + chr7_3:68161753-68161772 Msa1119320:intron 45.0%
! ATAAAAGCCGGTTTACGCGC+TGG - chr7_3:68157259-68157278 Msa1119310:intron 50.0%
! GGACGCAGAAGAAGTATGGT+AGG + chr7_3:68157648-68157667 None:intergenic 50.0%
CGTAGGACGCAGAAGAAGTA+TGG + chr7_3:68157652-68157671 None:intergenic 50.0%
GTTGTGGAGATAAGGAAGGG+AGG - chr7_3:68158129-68158148 Msa1119310:CDS 50.0%
TGGAGATAAGGAAGGGAGGA+AGG - chr7_3:68158133-68158152 Msa1119310:CDS 50.0%
AGATAAGGAAGGGAGGAAGG+AGG - chr7_3:68158136-68158155 Msa1119310:CDS 50.0%
GGCCTCAAAGATGGAAACCA+AGG - chr7_3:68159023-68159042 Msa1119310:intron 50.0%
CGCCTTGGTTTCCATCTTTG+AGG + chr7_3:68159028-68159047 None:intergenic 50.0%
! TCAGCTGCGGCTTTTGTTGA+AGG - chr7_3:68159063-68159082 Msa1119310:intron 50.0%
TGTTATAGACCACCGCTTGC+CGG - chr7_3:68159238-68159257 Msa1119310:intron 50.0%
ATTGCAGGTGAAACTCGTGC+CGG + chr7_3:68159260-68159279 None:intergenic 50.0%
GTTTGAGAGTTTGGAGGGGA+AGG - chr7_3:68159319-68159338 Msa1119310:intron 50.0%
!!! TATTGAGGGAGGGTTTTGGG+GGG + chr7_3:68159524-68159543 None:intergenic 50.0%
!! GTATTGAGGGAGGGTTTTGG+GGG + chr7_3:68159525-68159544 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr7_3:68159688-68159707 None:intergenic 50.0%
! GCACTAGCTTGGTGGGAATA+TGG + chr7_3:68159786-68159805 None:intergenic 50.0%
! GGGTAGGTTTTGCACTAGCT+TGG + chr7_3:68159797-68159816 None:intergenic 50.0%
GCTCCCAATGTCCTATGTGT+TGG - chr7_3:68160340-68160359 Msa1119310:intron 50.0%
GTCTTTCATCGCCCTACTCT+TGG - chr7_3:68160558-68160577 Msa1119310:five_prime_UTR 50.0%
TTTCATCGCCCTACTCTTGG+AGG - chr7_3:68160561-68160580 Msa1119310:five_prime_UTR 50.0%
GAACACACCATGTTGGTCGA+AGG - chr7_3:68160769-68160788 Msa1119310:intron 50.0%
GACGGTTGATCCAGAAGTTG+AGG + chr7_3:68161003-68161022 None:intergenic 50.0%
!! ATGTGGTTCTAGCACAGAGG+AGG + chr7_3:68161099-68161118 Msa1119320:intron 50.0%
GACAGCATTTGCAGTGTCGC+CGG - chr7_3:68157315-68157334 Msa1119310:CDS 55.0%
AAAACTCCGGCGGCGATTTC+CGG - chr7_3:68157494-68157513 Msa1119310:intron 55.0%
! GCTGCGGCTTTTGTTGAAGG+CGG - chr7_3:68159066-68159085 Msa1119310:intron 55.0%
GTTTCACCTGCAATGCGTCC+TGG - chr7_3:68159266-68159285 Msa1119310:intron 55.0%
ACCTGCAATGCGTCCTGGAA+TGG - chr7_3:68159271-68159290 Msa1119310:intron 55.0%
ACCATTCCAGGACGCATTGC+AGG + chr7_3:68159275-68159294 None:intergenic 55.0%
AGAGTTTGGAGGGGAAGGGA+TGG - chr7_3:68159324-68159343 Msa1119310:intron 55.0%
GAGTTTGGAGGGGAAGGGAT+GGG - chr7_3:68159325-68159344 Msa1119310:intron 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG + chr7_3:68159514-68159533 None:intergenic 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG + chr7_3:68159515-68159534 None:intergenic 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr7_3:68159605-68159624 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr7_3:68159681-68159700 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr7_3:68159682-68159701 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr7_3:68159683-68159702 None:intergenic 55.0%
AGTGGAGGGTTACTCCGTCA+AGG - chr7_3:68160526-68160545 Msa1119310:intron 55.0%
! CGCCCTACTCTTGGAGGTTT+TGG - chr7_3:68160567-68160586 Msa1119310:five_prime_UTR 55.0%
CAGCTACACATGGGCGTCAA+TGG - chr7_3:68160690-68160709 Msa1119310:intron 55.0%
CACCATGTTGGTCGAAGGGA+AGG - chr7_3:68160774-68160793 Msa1119310:intron 55.0%
GTCCTTCCCTTCGACCAACA+TGG + chr7_3:68160779-68160798 None:intergenic 55.0%
GGTGGTTGACCATGACCAGA+TGG + chr7_3:68160813-68160832 None:intergenic 55.0%
GTACAAGGGGTTGGAAGGAG+AGG - chr7_3:68161550-68161569 Msa1119310:five_prime_UTR 55.0%
AAACTCCGGCGGCGATTTCC+GGG - chr7_3:68157495-68157514 Msa1119310:intron 60.0%
! GTGAAACTCGTGCCGGCAAG+CGG + chr7_3:68159253-68159272 None:intergenic 60.0%
TTTGGAGGGGAAGGGATGGG+AGG - chr7_3:68159328-68159347 Msa1119310:intron 60.0%
TTGGAGGGGAAGGGATGGGA+GGG - chr7_3:68159329-68159348 Msa1119310:intron 60.0%
GGAAGGGATGGGAGGGCTTT+GGG - chr7_3:68159336-68159355 Msa1119310:intron 60.0%
GAAGGGATGGGAGGGCTTTG+GGG - chr7_3:68159337-68159356 Msa1119310:intron 60.0%
! AAGGGATGGGAGGGCTTTGG+GGG - chr7_3:68159338-68159357 Msa1119310:intron 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG + chr7_3:68159518-68159537 None:intergenic 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr7_3:68159602-68159621 None:intergenic 60.0%
CGCGTGATGTGTCTTCGCAC+TGG + chr7_3:68161770-68161789 Msa1119320:intron 60.0%
TCCTGCGCCAGCGCGTAAAC+CGG + chr7_3:68157269-68157288 None:intergenic 65.0%
! AAACTCGTGCCGGCAAGCGG+TGG + chr7_3:68159250-68159269 None:intergenic 65.0%
GGGAAGGGATGGGAGGGCTT+TGG - chr7_3:68159335-68159354 Msa1119310:intron 65.0%
!! AGGGATGGGAGGGCTTTGGG+GGG - chr7_3:68159339-68159358 Msa1119310:intron 65.0%
!! ATGGGAGGGCTTTGGGGGGT+TGG - chr7_3:68159343-68159362 Msa1119310:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr7_3:68159676-68159695 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr7_3:68159677-68159696 None:intergenic 65.0%
! GGTTTACGCGCTGGCGCAGG+AGG - chr7_3:68157268-68157287 Msa1119310:CDS 70.0%
! TTACGCGCTGGCGCAGGAGG+AGG - chr7_3:68157271-68157290 Msa1119310:CDS 70.0%
! TACGCGCTGGCGCAGGAGGA+GGG - chr7_3:68157272-68157291 Msa1119310:CDS 70.0%
ACTCGCCCGGAAATCGCCGC+CGG + chr7_3:68157503-68157522 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + chr7_3:68159672-68159691 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr7_3:68159673-68159692 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr7_3:68159678-68159697 None:intergenic 70.0%
! GCCGGTTTACGCGCTGGCGC+AGG - chr7_3:68157265-68157284 Msa1119310:intron 75.0%
! ACGCGCTGGCGCAGGAGGAG+GGG - chr7_3:68157273-68157292 Msa1119310:CDS 75.0%
TGGAGGGGAGGGGAGGGGAG+GGG + chr7_3:68159671-68159690 None:intergenic 75.0%
!! CGCGCTGGCGCAGGAGGAGG+GGG - chr7_3:68157274-68157293 Msa1119310:CDS 80.0%
! GGGGAGGGGAGGGGAGGGGA+GGG + chr7_3:68159667-68159686 None:intergenic 80.0%
! AGGGGAGGGGAGGGGAGGGG+AGG + chr7_3:68159668-68159687 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 68156734 68161973 68156734 ID=Msa1119310;Name=Msa1119310
chr7_3 mRNA 68156734 68161973 68156734 ID=Msa1119310-mRNA-1;Parent=Msa1119310;Name=Msa1119310-mRNA-1;_AED=0.08;_eAED=0.08;_QI=919|1|1|1|0.6|0.54|11|344|327
chr7_3 exon 68156734 68157180 68156734 ID=Msa1119310-mRNA-1:exon:17000;Parent=Msa1119310-mRNA-1
chr7_3 exon 68157267 68157374 68157267 ID=Msa1119310-mRNA-1:exon:16999;Parent=Msa1119310-mRNA-1
chr7_3 exon 68157647 68158014 68157647 ID=Msa1119310-mRNA-1:exon:16998;Parent=Msa1119310-mRNA-1
chr7_3 exon 68158108 68158216 68158108 ID=Msa1119310-mRNA-1:exon:16997;Parent=Msa1119310-mRNA-1
chr7_3 exon 68158316 68158378 68158316 ID=Msa1119310-mRNA-1:exon:16996;Parent=Msa1119310-mRNA-1
chr7_3 exon 68159415 68159461 68159415 ID=Msa1119310-mRNA-1:exon:16995;Parent=Msa1119310-mRNA-1
chr7_3 exon 68159549 68159683 68159549 ID=Msa1119310-mRNA-1:exon:16994;Parent=Msa1119310-mRNA-1
chr7_3 exon 68160371 68160441 68160371 ID=Msa1119310-mRNA-1:exon:16993;Parent=Msa1119310-mRNA-1
chr7_3 exon 68160539 68160688 68160539 ID=Msa1119310-mRNA-1:exon:16992;Parent=Msa1119310-mRNA-1
chr7_3 exon 68161146 68161223 68161146 ID=Msa1119310-mRNA-1:exon:16991;Parent=Msa1119310-mRNA-1
chr7_3 exon 68161303 68161973 68161303 ID=Msa1119310-mRNA-1:exon:16990;Parent=Msa1119310-mRNA-1
chr7_3 five_prime_UTR 68161303 68161973 68161303 ID=Msa1119310-mRNA-1:five_prime_utr;Parent=Msa1119310-mRNA-1
chr7_3 five_prime_UTR 68161146 68161223 68161146 ID=Msa1119310-mRNA-1:five_prime_utr;Parent=Msa1119310-mRNA-1
chr7_3 five_prime_UTR 68160539 68160688 68160539 ID=Msa1119310-mRNA-1:five_prime_utr;Parent=Msa1119310-mRNA-1
chr7_3 five_prime_UTR 68160422 68160441 68160422 ID=Msa1119310-mRNA-1:five_prime_utr;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68160371 68160421 68160371 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68159549 68159683 68159549 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68159415 68159461 68159415 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68158316 68158378 68158316 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68158108 68158216 68158108 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68157647 68158014 68157647 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68157267 68157374 68157267 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 CDS 68157078 68157180 68157078 ID=Msa1119310-mRNA-1:cds;Parent=Msa1119310-mRNA-1
chr7_3 three_prime_UTR 68156734 68157077 68156734 ID=Msa1119310-mRNA-1:three_prime_utr;Parent=Msa1119310-mRNA-1
Gene Sequence

>Msa1119310

ATGATTGTGCCCCTTCATTCCTTACCCTTTCTATATTTTTCCTCAACGAAGGCCTCAAAGATGGAAACCAAGGCGGAAAATCATATGACATCAGCTGCGGCTTTTGTTGAAGGCGGCATTCAAGAGTCTTGTGATGACGCTTGCAGCATATGCCTTGAAGAGTTTTGTGATAATGATCCTTCAACTACCACCGCTTGCCGGCACGAGTTTCACCTGCAATGCGTCCTGGAATGGTGTCAAAGAAGCTCCCAATGTCCTATGTGTTGGCAACCTATTAGCTTGAAAGATCCTACTGGTCAAGAACTGTTTGAGGCAGTAGAACAAGAGAGAAAGTGGAGGGTTACTCCGTCAAGGAATATTGATGTCTTTCATCGCCCTACTCTTGGAGGTTTTGGATTTCAACATCTACACATGGGCGTCAATGGTTCTTCTTTAGAAGAGCGATTGCTTCAAAATTTAGCGATTGTTGCATCAATCGGAAGAACACACCATGTTGGTCGAAGGGAAGGACAACAAATTCGACCATCTGGTCATGGTCAACCACCCTTCTTATTCTCAAATCAACATGTTGCACCTTCTTCATCCATTTTAGGTTCAACTGATGAAAGAGAAGACAATCTTAATGCAATTCATATGAGCAGTCAATCTACTCCAATAACATCTAGTGAAGAAGAACCATTACAACAAATACCAAAATGTCAAACTGAAAGTCCCTCAACTTCTGGATCAACCGTCACGGAAACAAATGGCCAAGAAACTTACTCCAATGATAGAGACTGTGTTGCTAATTCTTCCCCAATAAACCAAAATAGAGAAAGGTCATCAGAATTCCATTCATTTTCTGATACTCTGCGGTCCAAACTCAATGCAGTGTCAATGAGATATAAAGAGTCAATTTCAAATGGTACAAGGGGTTGGAAGGAGAGGTTGTTCTCTCGAAGTTCGACCATGTCAGAATTTGGTTCAAATTCTAGAAAAAGGTGA

Protein sequence

>Msa1119310

MIVPLHSLPFLYFSSTKASKMETKAENHMTSAAAFVEGGIQESCDDACSICLEEFCDNDPSTTTACRHEFHLQCVLEWCQRSSQCPMCWQPISLKDPTGQELFEAVEQERKWRVTPSRNIDVFHRPTLGGFGFQHLHMGVNGSSLEERLLQNLAIVASIGRTHHVGRREGQQIRPSGHGQPPFLFSNQHVAPSSSILGSTDEREDNLNAIHMSSQSTPITSSEEEPLQQIPKCQTESPSTSGSTVTETNGQETYSNDRDCVANSSPINQNRERSSEFHSFSDTLRSKLNAVSMRYKESISNGTRGWKERLFSRSSTMSEFGSNSRKR*