Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1148650 | XP_003622936.1 | 96.560 | 436 | 15 | 0 | 1 | 436 | 1 | 436 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1148650 | sp|Q5R6J3|S35F5_PONAB | 29.484 | 407 | 252 | 8 | 13 | 393 | 68 | 465 | 5.52e-39 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1148650 | G7L198 | 96.560 | 436 | 15 | 0 | 1 | 436 | 1 | 436 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015140 | Msa1148650 | 0.811589 | 6.491432e-51 | -8.615850e-47 |
| Msa0108870 | Msa1148650 | 0.804889 | 1.739476e-49 | -8.615850e-47 |
| Msa0619920 | Msa1148650 | 0.830194 | 3.369385e-55 | -8.615850e-47 |
| Msa0140170 | Msa1148650 | 0.808993 | 2.356579e-50 | -8.615850e-47 |
| Msa0154920 | Msa1148650 | 0.802714 | 4.921887e-49 | -8.615850e-47 |
| Msa1105500 | Msa1148650 | 0.813854 | 2.073565e-51 | -8.615850e-47 |
| Msa0322680 | Msa1148650 | 0.812220 | 4.730580e-51 | -8.615850e-47 |
| Msa1148650 | Msa1317270 | 0.802724 | 4.898045e-49 | -8.615850e-47 |
| Msa1148650 | Msa1417180 | 0.964898 | 6.556035e-124 | -8.615850e-47 |
| Msa1148650 | Msa1449050 | 0.997749 | 1.951708e-248 | -8.615850e-47 |
| Msa0519390 | Msa1148650 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0853950 | Msa1148650 | 0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0901320 | Msa1148650 | 0.815139 | 1.077092e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1148650 | MtrunA17_Chr7g0237321 | 96.560 | 436 | 15 | 0 | 1 | 436 | 1 | 436 | 0.0 | 848 |
| Msa1148650 | MtrunA17_Chr1g0149511 | 29.471 | 397 | 239 | 13 | 13 | 398 | 5 | 371 | 2.73e-34 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1148650 | AT3G07080.1 | 68.646 | 421 | 112 | 4 | 7 | 415 | 1 | 413 | 0.0 | 517 |
| Msa1148650 | AT4G32140.1 | 29.756 | 410 | 250 | 15 | 12 | 405 | 3 | 390 | 2.59e-34 | 132 |
Find 121 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTCAGTTTCTTGGATTTC+TGG | -0.002991 | 7_4:-29041898 | Msa1148650:CDS |
| TTGATTCCAATTGTTGAAAT+TGG | 0.131160 | 7_4:-29043186 | Msa1148650:CDS |
| TAGAAATTGAATCCAAATTA+TGG | 0.133988 | 7_4:+29043657 | None:intergenic |
| CATTTAATTTCTTGCGAATA+AGG | 0.142549 | 7_4:+29041952 | None:intergenic |
| AAGAGTGATAAGAGTTTAAA+AGG | 0.154666 | 7_4:-29043123 | Msa1148650:CDS |
| GAATCATCCAACCCATAATT+TGG | 0.172630 | 7_4:-29043669 | Msa1148650:five_prime_UTR |
| CCTTGGTGAAATTGAGTATT+AGG | 0.200211 | 7_4:+29041841 | None:intergenic |
| TGTTGAAATTGGGAGGTATT+TGG | 0.227476 | 7_4:-29043175 | Msa1148650:CDS |
| GCAGCTGAATCTTGTGTTCT+TGG | 0.228024 | 7_4:+29039127 | None:intergenic |
| GTTGCCTCAAATCCTCTTCT+TGG | 0.248584 | 7_4:-29042023 | Msa1148650:CDS |
| AAGCAGCTTGGTCTGATTAT+TGG | 0.259880 | 7_4:-29041792 | Msa1148650:CDS |
| TAATAGCTGTTGCAATAATA+TGG | 0.277942 | 7_4:-29043299 | Msa1148650:CDS |
| GCTACAAAAGAGTCGTAAAT+TGG | 0.278178 | 7_4:+29043509 | None:intergenic |
| TGGACATTCTCCTCCCTTCA+TGG | 0.295170 | 7_4:-29039290 | Msa1148650:CDS |
| GCTAGTATGGCTCAGTTTCT+TGG | 0.297598 | 7_4:-29041906 | Msa1148650:CDS |
| GCTCAGTTTCTTGGATTTCT+GGG | 0.301569 | 7_4:-29041897 | Msa1148650:CDS |
| GTTTATTGATATGCCCGTTT+TGG | 0.303197 | 7_4:-29042858 | Msa1148650:CDS |
| TGGGTTGGATGATTCAATTA+TGG | 0.321612 | 7_4:+29043677 | None:intergenic |
| AAGAGTTTAAAAGGGAGGTT+AGG | 0.322283 | 7_4:-29043114 | Msa1148650:CDS |
| TATGGTGGGTTCAAAAGATT+TGG | 0.328397 | 7_4:-29043361 | Msa1148650:CDS |
| AAAGCATGGAAATGGGGTTT+AGG | 0.333836 | 7_4:-29043333 | Msa1148650:CDS |
| AGTCTTGGTGATTCACAATC+TGG | 0.338502 | 7_4:-29042056 | Msa1148650:CDS |
| TACCTCCCAATTTCAACAAT+TGG | 0.341869 | 7_4:+29043180 | None:intergenic |
| GCTGTCATGATCGGCTTTGC+TGG | 0.343637 | 7_4:-29039250 | Msa1148650:CDS |
| ATTGGTTGGTCGGGTTGGTT+TGG | 0.346117 | 7_4:-29042950 | Msa1148650:CDS |
| ATGTGCTGAGTGATTACTTA+TGG | 0.347004 | 7_4:-29039402 | Msa1148650:CDS |
| AGGTATTTGGAGGATTCTTA+TGG | 0.349869 | 7_4:-29043162 | Msa1148650:CDS |
| AGAAATTGAATCCAAATTAT+GGG | 0.350708 | 7_4:+29043658 | None:intergenic |
| CCTATCAAAACCAGGATTGC+TGG | 0.353043 | 7_4:-29039428 | Msa1148650:intron |
| CTTATGGTGATTTATTGTTT+TGG | 0.353615 | 7_4:-29043146 | Msa1148650:CDS |
| TGGATAGTAAAGCATGGAAA+TGG | 0.360167 | 7_4:-29043341 | Msa1148650:CDS |
| ATTTAATTTCTTGCGAATAA+GGG | 0.360980 | 7_4:+29041953 | None:intergenic |
| TTCCAAGTAAGCATATAAAA+AGG | 0.364591 | 7_4:+29041813 | None:intergenic |
| TGATTCCAATTGTTGAAATT+GGG | 0.366697 | 7_4:-29043185 | Msa1148650:CDS |
| GGGTTGGATGATTCAATTAT+GGG | 0.370525 | 7_4:+29043678 | None:intergenic |
| GGATAGTAAAGCATGGAAAT+GGG | 0.381171 | 7_4:-29043340 | Msa1148650:CDS |
| CATATGCAATTCATTATTTG+TGG | 0.382385 | 7_4:-29043211 | Msa1148650:CDS |
| AAAGAATGGTGAAGCTAGTA+TGG | 0.384418 | 7_4:-29041919 | Msa1148650:CDS |
| CTTGGTGAAATTGAGTATTA+GGG | 0.387036 | 7_4:+29041842 | None:intergenic |
| GGAGGATTGGTTGGTCGGGT+TGG | 0.398920 | 7_4:-29042955 | Msa1148650:CDS |
| AGGTGGATGGGATTATTGAT+AGG | 0.423853 | 7_4:-29043017 | Msa1148650:CDS |
| CGTGACTGTAGTATACTTCA+AGG | 0.427227 | 7_4:+29042807 | None:intergenic |
| AGAGTTTAAAAGGGAGGTTA+GGG | 0.430574 | 7_4:-29043113 | Msa1148650:CDS |
| AAATTGAGTATTAGGGCAAC+TGG | 0.432650 | 7_4:+29041849 | None:intergenic |
| TAGTTGGAGGATTGGTTGGT+CGG | 0.434753 | 7_4:-29042960 | Msa1148650:CDS |
| CTTTAGTGTTCTTCTCTGCA+TGG | 0.443808 | 7_4:-29042096 | Msa1148650:CDS |
| TTTAGTGTTCTTCTCTGCAT+GGG | 0.445703 | 7_4:-29042095 | Msa1148650:CDS |
| TTGGTTGATATATATAGATA+TGG | 0.447856 | 7_4:-29043379 | Msa1148650:exon |
| CTTTGCTGGAATCAATATTC+CGG | 0.452225 | 7_4:-29039236 | Msa1148650:CDS |
| GGGATTATTGATAGGAATGA+TGG | 0.456021 | 7_4:-29043009 | Msa1148650:CDS |
| GAGGTTAGGGGAGTCAGAGC+AGG | 0.456521 | 7_4:-29043100 | Msa1148650:CDS |
| TGGTTCTGAATTGCTGCCTT+CGG | 0.458823 | 7_4:-29042989 | Msa1148650:CDS |
| AGAGTGATAAGAGTTTAAAA+GGG | 0.465346 | 7_4:-29043122 | Msa1148650:CDS |
| CAAAGAGGGTTGGATGAGAA+AGG | 0.478907 | 7_4:-29042913 | Msa1148650:CDS |
| CCTTCGGATGATGTAGTTGG+AGG | 0.489732 | 7_4:-29042973 | Msa1148650:CDS |
| CTCAGTTTCTTGGATTTCTG+GGG | 0.495232 | 7_4:-29041896 | Msa1148650:CDS |
| CTGCCTTCGGATGATGTAGT+TGG | 0.499551 | 7_4:-29042976 | Msa1148650:CDS |
| GCCATTGTCGATACCATCAC+TGG | 0.501679 | 7_4:-29039310 | Msa1148650:CDS |
| GTGATAAGAGTTTAAAAGGG+AGG | 0.501849 | 7_4:-29043119 | Msa1148650:CDS |
| ACCTGTCGGATAATCAAAAT+CGG | 0.502142 | 7_4:+29043585 | None:intergenic |
| GTCTCCAAGAAGAGGATTTG+AGG | 0.508065 | 7_4:+29042019 | None:intergenic |
| TTGGTTATTGATGAGGTGGA+TGG | 0.510641 | 7_4:-29043030 | Msa1148650:CDS |
| GTTGATATATATAGATATGG+TGG | 0.511000 | 7_4:-29043376 | Msa1148650:exon |
| TTGAAAATGTTGATCAAAGA+GGG | 0.511678 | 7_4:-29042927 | Msa1148650:CDS |
| AGTTGGAGGATTGGTTGGTC+GGG | 0.512706 | 7_4:-29042959 | Msa1148650:CDS |
| GGAACAATAATTGTAAGTCT+TGG | 0.513896 | 7_4:-29042071 | Msa1148650:CDS |
| CATATGTAAGTAACAAGAAA+CGG | 0.514779 | 7_4:+29043228 | None:intergenic |
| TGGATGATTCAATTATGGGT+TGG | 0.516151 | 7_4:+29043682 | None:intergenic |
| AAAATACAATGTACAGGCTA+TGG | 0.518562 | 7_4:+29039100 | None:intergenic |
| ATTGAATCCAAATTATGGGT+TGG | 0.518853 | 7_4:+29043662 | None:intergenic |
| AACAAGAAACGGCGAGACAC+CGG | 0.521941 | 7_4:+29043239 | None:intergenic |
| GATGTAGTTGGAGGATTGGT+TGG | 0.522578 | 7_4:-29042964 | Msa1148650:CDS |
| TGTGCTGAGTGATTACTTAT+GGG | 0.526669 | 7_4:-29039401 | Msa1148650:CDS |
| TGAAATTGGGAGGTATTTGG+AGG | 0.527355 | 7_4:-29043172 | Msa1148650:CDS |
| AAGAAATTAAATGACGATGA+TGG | 0.528803 | 7_4:-29041942 | Msa1148650:CDS |
| GTTGAAAATGTTGATCAAAG+AGG | 0.534234 | 7_4:-29042928 | Msa1148650:CDS |
| TATCGACAATGGCAGCCAAT+GGG | 0.535322 | 7_4:+29039320 | None:intergenic |
| GGATGATGTAGTTGGAGGAT+TGG | 0.538766 | 7_4:-29042968 | Msa1148650:CDS |
| AAATGTTGATCAAAGAGGGT+TGG | 0.544769 | 7_4:-29042923 | Msa1148650:CDS |
| TGGTTATTGATGAGGTGGAT+GGG | 0.545204 | 7_4:-29043029 | Msa1148650:CDS |
| ATGCTTACTTGGAAGCAGCT+TGG | 0.546413 | 7_4:-29041804 | Msa1148650:CDS |
| TCAACCACAGTAGCTACAGC+TGG | 0.546656 | 7_4:-29039358 | Msa1148650:CDS |
| TTGATATATATAGATATGGT+GGG | 0.553205 | 7_4:-29043375 | Msa1148650:exon |
| TGAGGCGAGCGGTGAAGCTG+TGG | 0.553892 | 7_4:-29043058 | Msa1148650:CDS |
| CTTGGTCTGATTATTGGCAA+AGG | 0.556086 | 7_4:-29041786 | Msa1148650:intron |
| TGATGTTAGAAGAACAGCCT+TGG | 0.557047 | 7_4:+29039378 | None:intergenic |
| AATGACGATGATGGAAAGAA+TGG | 0.558044 | 7_4:-29041933 | Msa1148650:CDS |
| CGGTGAAGCTGTGGAGTCGT+TGG | 0.559011 | 7_4:-29043049 | Msa1148650:CDS |
| GATAGTAAAGCATGGAAATG+GGG | 0.564186 | 7_4:-29043339 | Msa1148650:CDS |
| ACTCACAATTCAAGTCCCAT+TGG | 0.565061 | 7_4:-29039335 | Msa1148650:CDS |
| TGCTCCGAGGTAATCCATGA+AGG | 0.566177 | 7_4:+29039276 | None:intergenic |
| TTCCAATTGTTGAAATTGGG+AGG | 0.572344 | 7_4:-29043182 | Msa1148650:CDS |
| AAAGAGGGTTGGATGAGAAA+GGG | 0.575130 | 7_4:-29042912 | Msa1148650:CDS |
| GTCGTTGGTTATTGATGAGG+TGG | 0.576267 | 7_4:-29043034 | Msa1148650:CDS |
| GTATCGACAATGGCAGCCAA+TGG | 0.576644 | 7_4:+29039319 | None:intergenic |
| CCTCCCTTCATGGATTACCT+CGG | 0.584550 | 7_4:-29039280 | Msa1148650:CDS |
| AGTGTTCTTCTCTGCATGGG+AGG | 0.584870 | 7_4:-29042092 | Msa1148650:CDS |
| ATCAACAGAAACTACTGCTG+TGG | 0.586651 | 7_4:-29039197 | Msa1148650:CDS |
| GATACTTCTTAGAGATAATG+AGG | 0.587046 | 7_4:-29043076 | Msa1148650:CDS |
| AAAAGCTAGTGAAACCAAGA+AGG | 0.587390 | 7_4:+29042148 | None:intergenic |
| GGTTGGATGAGAAAGGGCGT+TGG | 0.588582 | 7_4:-29042906 | Msa1148650:CDS |
| AAGATTTGGATAGTAAAGCA+TGG | 0.592190 | 7_4:-29043347 | Msa1148650:CDS |
| GGAGCAATAGCTGTCATGAT+CGG | 0.595414 | 7_4:-29039259 | Msa1148650:CDS |
| GATTTGCTAAAAGTTTCGAC+CGG | 0.599285 | 7_4:+29039217 | None:intergenic |
| GAGTTTAAAAGGGAGGTTAG+GGG | 0.604921 | 7_4:-29043112 | Msa1148650:CDS |
| GGGAGGAGAATGTCCAGTGA+TGG | 0.613474 | 7_4:+29039297 | None:intergenic |
| TCCAGTGATGGTATCGACAA+TGG | 0.618439 | 7_4:+29039309 | None:intergenic |
| GTGCAATCTGTTGTAGATGC+CGG | 0.622214 | 7_4:-29043258 | Msa1148650:CDS |
| CAGTGAAGAATAAGAACTAG+AGG | 0.622553 | 7_4:-29038973 | Msa1148650:three_prime_UTR |
| GAGTGATTACTTATGGGCCA+AGG | 0.635867 | 7_4:-29039395 | Msa1148650:CDS |
| GCTCCGAGGTAATCCATGAA+GGG | 0.637265 | 7_4:+29039277 | None:intergenic |
| GCGAATAAGGGTGATATACA+CGG | 0.641125 | 7_4:+29041965 | None:intergenic |
| TGTCGGATAATCAAAATCGG+TGG | 0.643264 | 7_4:+29043588 | None:intergenic |
| GGAGTCGTTGGTTATTGATG+AGG | 0.652711 | 7_4:-29043037 | Msa1148650:CDS |
| GAGTCCAGCTGTAGCTACTG+TGG | 0.652955 | 7_4:+29039354 | None:intergenic |
| CCTCCAACTACATCATCCGA+AGG | 0.666233 | 7_4:+29042973 | None:intergenic |
| CTTGAAGTATACTACAGTCA+CGG | 0.678447 | 7_4:-29042806 | Msa1148650:intron |
| CCTAATACTCAATTTCACCA+AGG | 0.684236 | 7_4:-29041841 | Msa1148650:CDS |
| CTTAGAGATAATGAGGCGAG+CGG | 0.687600 | 7_4:-29043069 | Msa1148650:CDS |
| ACACAGTACGATGTACCTGT+CGG | 0.694325 | 7_4:+29043571 | None:intergenic |
| TCATGACAGCTATTGCTCCG+AGG | 0.724191 | 7_4:+29039263 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTATTATAACAGA+AGG | + | chr7_4:29041901-29041920 | None:intergenic | 10.0% |
| !! | TATACATATATAAATAACCA+AGG | + | chr7_4:29041491-29041510 | None:intergenic | 15.0% |
| !!! | AAATTATGGTATCATTTTTA+GGG | + | chr7_4:29041751-29041770 | None:intergenic | 15.0% |
| !!! | AAAATTATGGTATCATTTTT+AGG | + | chr7_4:29041752-29041771 | None:intergenic | 15.0% |
| !!! | TTCATAGAAATCTAAAATTA+TGG | + | chr7_4:29041765-29041784 | None:intergenic | 15.0% |
| !!! | AATTTTAGATTTCTATGAAT+AGG | - | chr7_4:29041766-29041785 | Msa1148650:intron | 15.0% |
| !! | TAGTCAAAAAAAAAATGAAT+AGG | - | chr7_4:29041797-29041816 | Msa1148650:CDS | 15.0% |
| !!! | AATAAATTCTAAAATAAGGT+GGG | + | chr7_4:29042254-29042273 | None:intergenic | 15.0% |
| !!! | AAATAAATTCTAAAATAAGG+TGG | + | chr7_4:29042255-29042274 | None:intergenic | 15.0% |
| !!! | CTCAAATAAATTCTAAAATA+AGG | + | chr7_4:29042258-29042277 | None:intergenic | 15.0% |
| !!! | TCTCAAATAAATTCTTTTTT+TGG | + | chr7_4:29042359-29042378 | None:intergenic | 15.0% |
| !! | AAAAGAATTTATTTGAGAAA+AGG | - | chr7_4:29042361-29042380 | Msa1148650:intron | 15.0% |
| !! | AAAGAATTTATTTGAGAAAA+GGG | - | chr7_4:29042362-29042381 | Msa1148650:intron | 15.0% |
| !! | TTTAAAAATAACTCAATACT+GGG | + | chr7_4:29042443-29042462 | None:intergenic | 15.0% |
| !! | ATTTAAAAATAACTCAATAC+TGG | + | chr7_4:29042444-29042463 | None:intergenic | 15.0% |
| !! | AGAAATTGAATCCAAATTAT+GGG | + | chr7_4:29039000-29039019 | None:intergenic | 20.0% |
| !! | TAGAAATTGAATCCAAATTA+TGG | + | chr7_4:29039001-29039020 | None:intergenic | 20.0% |
| !!! | TATTTTCTAGAATTGCAAAA+TGG | - | chr7_4:29039180-29039199 | Msa1148650:CDS | 20.0% |
| !!! | ATTTTCTAGAATTGCAAAAT+GGG | - | chr7_4:29039181-29039200 | Msa1148650:CDS | 20.0% |
| !!! | TTGGTTGATATATATAGATA+TGG | - | chr7_4:29039276-29039295 | Msa1148650:CDS | 20.0% |
| !! | TTGATATATATAGATATGGT+GGG | - | chr7_4:29039280-29039299 | Msa1148650:CDS | 20.0% |
| !! | AGTAGTTAATGAATATAACA+AGG | - | chr7_4:29040037-29040056 | Msa1148650:intron | 20.0% |
| !! | TCTAGGTATTCAAATAAATA+TGG | - | chr7_4:29040127-29040146 | Msa1148650:intron | 20.0% |
| !! | ATGTATATATGAACCTAATT+TGG | + | chr7_4:29040176-29040195 | None:intergenic | 20.0% |
| !! | TGAAAAAGTAACTAATTTAG+AGG | + | chr7_4:29040438-29040457 | None:intergenic | 20.0% |
| !!! | ATTTAATTTCTTGCGAATAA+GGG | + | chr7_4:29040705-29040724 | None:intergenic | 20.0% |
| !! | TAAATGATAGTCATGATTAT+AGG | - | chr7_4:29041000-29041019 | Msa1148650:intron | 20.0% |
| !! | TGCAAAATACAATATGTAAA+GGG | + | chr7_4:29041199-29041218 | None:intergenic | 20.0% |
| !! | TTGCAAAATACAATATGTAA+AGG | + | chr7_4:29041200-29041219 | None:intergenic | 20.0% |
| !! | TATAACTTACAACTATTGAT+TGG | + | chr7_4:29041408-29041427 | None:intergenic | 20.0% |
| !!! | ATATTTCTTCATATTTTGCT+TGG | - | chr7_4:29041708-29041727 | Msa1148650:intron | 20.0% |
| !! | TCAAAAGAATTTGTGATTTA+TGG | + | chr7_4:29041840-29041859 | None:intergenic | 20.0% |
| !!! | CAAATAAATTCTTTTTTTGG+TGG | + | chr7_4:29042356-29042375 | None:intergenic | 20.0% |
| !! | AAGAATTTATTTGAGAAAAG+GGG | - | chr7_4:29042363-29042382 | Msa1148650:intron | 20.0% |
| !! | GATAATTCTTATGAGTTTAA+TGG | + | chr7_4:29042529-29042548 | None:intergenic | 20.0% |
| !! | ATCTTAAAAGGAAAAAAGTT+GGG | + | chr7_4:29042900-29042919 | None:intergenic | 20.0% |
| !! | CTGTTCAAATATTTGAAAAT+TGG | - | chr7_4:29043071-29043090 | Msa1148650:CDS | 20.0% |
| !!! | ATTTTGTAATTAAAGGTGAA+AGG | - | chr7_4:29043118-29043137 | Msa1148650:CDS | 20.0% |
| !! | TTTAGTTGTTGCAAAAAATT+TGG | + | chr7_4:29043645-29043664 | None:intergenic | 20.0% |
| !!! | TAGATTTTGAGTTTTGAGAA+GGG | - | chr7_4:29039250-29039269 | Msa1148650:CDS | 25.0% |
| ! | GTTGATATATATAGATATGG+TGG | - | chr7_4:29039279-29039298 | Msa1148650:CDS | 25.0% |
| ! | TAATAGCTGTTGCAATAATA+TGG | - | chr7_4:29039356-29039375 | Msa1148650:CDS | 25.0% |
| ! | CATATGTAAGTAACAAGAAA+CGG | + | chr7_4:29039430-29039449 | None:intergenic | 25.0% |
| ! | CATATGCAATTCATTATTTG+TGG | - | chr7_4:29039444-29039463 | Msa1148650:intron | 25.0% |
| ! | TTGATTCCAATTGTTGAAAT+TGG | - | chr7_4:29039469-29039488 | Msa1148650:intron | 25.0% |
| ! | TGATTCCAATTGTTGAAATT+GGG | - | chr7_4:29039470-29039489 | Msa1148650:intron | 25.0% |
| !! | CTTATGGTGATTTATTGTTT+TGG | - | chr7_4:29039509-29039528 | Msa1148650:intron | 25.0% |
| ! | AAGAGTGATAAGAGTTTAAA+AGG | - | chr7_4:29039532-29039551 | Msa1148650:intron | 25.0% |
| ! | AGAGTGATAAGAGTTTAAAA+GGG | - | chr7_4:29039533-29039552 | Msa1148650:intron | 25.0% |
| ! | TTGAAAATGTTGATCAAAGA+GGG | - | chr7_4:29039728-29039747 | Msa1148650:intron | 25.0% |
| ! | GCTTAAATTAGCAGAAATTA+TGG | - | chr7_4:29039930-29039949 | Msa1148650:intron | 25.0% |
| ! | AAAATCGAAAACAATTTCGA+TGG | - | chr7_4:29039976-29039995 | Msa1148650:intron | 25.0% |
| ! | ATTTGAATACCTAGAAATCA+TGG | + | chr7_4:29040122-29040141 | None:intergenic | 25.0% |
| ! | ATATATGAACCTAATTTGGA+GGG | + | chr7_4:29040172-29040191 | None:intergenic | 25.0% |
| ! | TATATATGAACCTAATTTGG+AGG | + | chr7_4:29040173-29040192 | None:intergenic | 25.0% |
| ! | GTATGTTTGAATAGAAATTG+TGG | + | chr7_4:29040241-29040260 | None:intergenic | 25.0% |
| ! | AAACATACACAGAAAAATTG+TGG | - | chr7_4:29040253-29040272 | Msa1148650:intron | 25.0% |
| ! | GTAAATGCAAATCAAATACA+TGG | + | chr7_4:29040363-29040382 | None:intergenic | 25.0% |
| ! | AACAAAATTCGACAACAATT+TGG | + | chr7_4:29040389-29040408 | None:intergenic | 25.0% |
| !! | CATTTAATTTCTTGCGAATA+AGG | + | chr7_4:29040706-29040725 | None:intergenic | 25.0% |
| ! | AAGAAATTAAATGACGATGA+TGG | - | chr7_4:29040713-29040732 | Msa1148650:intron | 25.0% |
| ! | AGTAAGCATATAAAAAGGTT+CGG | + | chr7_4:29040840-29040859 | None:intergenic | 25.0% |
| !! | AACCTTTTTATATGCTTACT+TGG | - | chr7_4:29040840-29040859 | Msa1148650:intron | 25.0% |
| ! | TTCCAAGTAAGCATATAAAA+AGG | + | chr7_4:29040845-29040864 | None:intergenic | 25.0% |
| !! | GCTATCTTTTACATTTTCTT+TGG | - | chr7_4:29040901-29040920 | Msa1148650:intron | 25.0% |
| !! | AGTTCTTTATGCATTTTTCT+AGG | - | chr7_4:29040942-29040961 | Msa1148650:intron | 25.0% |
| !! | GTTCTTTATGCATTTTTCTA+GGG | - | chr7_4:29040943-29040962 | Msa1148650:intron | 25.0% |
| ! | AAGATGACTTTACATGTAAA+TGG | - | chr7_4:29041033-29041052 | Msa1148650:intron | 25.0% |
| !!! | TGTTCTTGTTGTTTTATGAA+TGG | - | chr7_4:29041141-29041160 | Msa1148650:intron | 25.0% |
| !! | TTTCTAAAAAGAACCCTTAA+AGG | + | chr7_4:29041286-29041305 | None:intergenic | 25.0% |
| !!! | TTTAAGGGTTCTTTTTAGAA+AGG | - | chr7_4:29041285-29041304 | Msa1148650:intron | 25.0% |
| ! | AGATTTCTATGAATAGGTAT+AGG | - | chr7_4:29041772-29041791 | Msa1148650:intron | 25.0% |
| ! | ATAAGGAATAAAAACTAAGC+AGG | + | chr7_4:29042087-29042106 | None:intergenic | 25.0% |
| !! | ATTTGAGACATCTTAAGTAT+TGG | - | chr7_4:29042161-29042180 | Msa1148650:CDS | 25.0% |
| !!! | ATAAATTCTTTTTTTGGTGG+TGG | + | chr7_4:29042353-29042372 | None:intergenic | 25.0% |
| !!! | AAACTAGTTTTACTCTTACA+CGG | - | chr7_4:29042403-29042422 | Msa1148650:intron | 25.0% |
| !!! | CATACATAGTTTTGTTTTCT+AGG | + | chr7_4:29042555-29042574 | None:intergenic | 25.0% |
| ! | TCTTAAAAGGAAAAAAGTTG+GGG | + | chr7_4:29042899-29042918 | None:intergenic | 25.0% |
| ! | CATCTTAAAAGGAAAAAAGT+TGG | + | chr7_4:29042901-29042920 | None:intergenic | 25.0% |
| ! | AATTATTCTCAAACCAAACA+TGG | + | chr7_4:29042929-29042948 | None:intergenic | 25.0% |
| ! | TTGTAATCAAAAGCAAAAAC+AGG | + | chr7_4:29042964-29042983 | None:intergenic | 25.0% |
| !! | CGTGTGAATTTTGTAATTAA+AGG | - | chr7_4:29043111-29043130 | Msa1148650:CDS | 25.0% |
| ! | AAATAATGTAGAATGAGGAA+AGG | + | chr7_4:29043187-29043206 | None:intergenic | 25.0% |
| ! | ATGTCAAATAATGTAGAATG+AGG | + | chr7_4:29043192-29043211 | None:intergenic | 25.0% |
| ! | TTATATTTCCTATCAAAACC+AGG | - | chr7_4:29043219-29043238 | Msa1148650:CDS | 25.0% |
| ! | GAAAGAAAAATACAATGTAC+AGG | + | chr7_4:29043564-29043583 | None:intergenic | 25.0% |
| ATTGAATCCAAATTATGGGT+TGG | + | chr7_4:29038996-29039015 | None:intergenic | 30.0% | |
| !!! | TTAGAACGTGTTTTGATTTC+TGG | - | chr7_4:29039221-29039240 | Msa1148650:CDS | 30.0% |
| !!! | TAGAACGTGTTTTGATTTCT+GGG | - | chr7_4:29039222-29039241 | Msa1148650:CDS | 30.0% |
| !!! | CTAGATTTTGAGTTTTGAGA+AGG | - | chr7_4:29039249-29039268 | Msa1148650:CDS | 30.0% |
| AAGATTTGGATAGTAAAGCA+TGG | - | chr7_4:29039308-29039327 | Msa1148650:CDS | 30.0% | |
| GATACTTCTTAGAGATAATG+AGG | - | chr7_4:29039579-29039598 | Msa1148650:intron | 30.0% | |
| GTTGAAAATGTTGATCAAAG+AGG | - | chr7_4:29039727-29039746 | Msa1148650:intron | 30.0% | |
| TGGAGGGTAATAACTTATAA+TGG | + | chr7_4:29040156-29040175 | None:intergenic | 30.0% | |
| AAGTTATTACCCTCCAAATT+AGG | - | chr7_4:29040160-29040179 | Msa1148650:intron | 30.0% | |
| AAAAATTGTGGTCAGAATCA+TGG | - | chr7_4:29040265-29040284 | Msa1148650:intron | 30.0% | |
| ! | GGTTAATTGTGTTTTGTGAA+TGG | - | chr7_4:29040286-29040305 | Msa1148650:intron | 30.0% |
| !!! | TTGGTTTCACTAGCTTTTTT+GGG | - | chr7_4:29040512-29040531 | Msa1148650:intron | 30.0% |
| !! | TTTTGGGAGAAAAGTTTACT+TGG | - | chr7_4:29040528-29040547 | Msa1148650:intron | 30.0% |
| GGAACAATAATTGTAAGTCT+TGG | - | chr7_4:29040584-29040603 | Msa1148650:intron | 30.0% | |
| CTTGGTGAAATTGAGTATTA+GGG | + | chr7_4:29040816-29040835 | None:intergenic | 30.0% | |
| TAATACTCGTAAACCACTAT+AGG | - | chr7_4:29041555-29041574 | Msa1148650:intron | 30.0% | |
| AATACTCGTAAACCACTATA+GGG | - | chr7_4:29041556-29041575 | Msa1148650:intron | 30.0% | |
| GCAAATTTGATTATAGTTCC+TGG | - | chr7_4:29041621-29041640 | Msa1148650:intron | 30.0% | |
| ACCTTCAAAATGTTAAGCTT+CGG | - | chr7_4:29041656-29041675 | Msa1148650:intron | 30.0% | |
| TAGATTGAAACACAAGCAAA+AGG | - | chr7_4:29041679-29041698 | Msa1148650:intron | 30.0% | |
| ! | TTCTTCATATTTTGCTTGGA+TGG | - | chr7_4:29041712-29041731 | Msa1148650:intron | 30.0% |
| !! | ATGAATAGGTATAGCCTTAT+AGG | - | chr7_4:29041811-29041830 | Msa1148650:CDS | 30.0% |
| GTGATTTATGGTAACCTATA+AGG | + | chr7_4:29041828-29041847 | None:intergenic | 30.0% | |
| TGCTGCTAGAATTTAAGAAA+CGG | - | chr7_4:29041949-29041968 | Msa1148650:CDS | 30.0% | |
| TAGAATTTAAGAAACGGTTC+AGG | - | chr7_4:29041955-29041974 | Msa1148650:CDS | 30.0% | |
| AGAATTTAAGAAACGGTTCA+GGG | - | chr7_4:29041956-29041975 | Msa1148650:CDS | 30.0% | |
| GGAAAATCAAATCAGGAATA+AGG | + | chr7_4:29042104-29042123 | None:intergenic | 30.0% | |
| !! | TTCCTGATTTGATTTTCCAA+TGG | - | chr7_4:29042106-29042125 | Msa1148650:CDS | 30.0% |
| TTCCATTGGAAAATCAAATC+AGG | + | chr7_4:29042111-29042130 | None:intergenic | 30.0% | |
| AAGATGTATTCAGCTAATGA+TGG | + | chr7_4:29042196-29042215 | None:intergenic | 30.0% | |
| ATCATTAGCTGAATACATCT+TGG | - | chr7_4:29042195-29042214 | Msa1148650:intron | 30.0% | |
| !! | AAATTCTAAAATAAGGTGGG+TGG | + | chr7_4:29042251-29042270 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | - | chr7_4:29042309-29042328 | Msa1148650:intron | 30.0% | |
| !!! | AACTAGTTTTACTCTTACAC+GGG | - | chr7_4:29042404-29042423 | Msa1148650:intron | 30.0% |
| AGTTATAAACTGTGCTTAGT+TGG | - | chr7_4:29042467-29042486 | Msa1148650:intron | 30.0% | |
| GCAAAATCATGAGTTCTTAT+TGG | - | chr7_4:29042489-29042508 | Msa1148650:intron | 30.0% | |
| GATGCAAAGTTGTAAATATG+CGG | + | chr7_4:29042813-29042832 | None:intergenic | 30.0% | |
| !! | AAGAGTTGATATGACTTTCA+TGG | - | chr7_4:29042854-29042873 | Msa1148650:CDS | 30.0% |
| CCAAGATGAAAATAATGTGA+CGG | + | chr7_4:29042989-29043008 | None:intergenic | 30.0% | |
| AAAATACAATGTACAGGCTA+TGG | + | chr7_4:29043558-29043577 | None:intergenic | 30.0% | |
| TGGATGATTCAATTATGGGT+TGG | + | chr7_4:29038976-29038995 | None:intergenic | 35.0% | |
| GGGTTGGATGATTCAATTAT+GGG | + | chr7_4:29038980-29038999 | None:intergenic | 35.0% | |
| ! | TGGGTTGGATGATTCAATTA+TGG | + | chr7_4:29038981-29039000 | None:intergenic | 35.0% |
| GAATCATCCAACCCATAATT+TGG | - | chr7_4:29038986-29039005 | Msa1148650:three_prime_UTR | 35.0% | |
| ACCTGTCGGATAATCAAAAT+CGG | + | chr7_4:29039073-29039092 | None:intergenic | 35.0% | |
| GCTACAAAAGAGTCGTAAAT+TGG | + | chr7_4:29039149-29039168 | None:intergenic | 35.0% | |
| !!! | TGAGTTTTGAGAAGGGTTTT+TGG | - | chr7_4:29039257-29039276 | Msa1148650:CDS | 35.0% |
| !! | TATGGTGGGTTCAAAAGATT+TGG | - | chr7_4:29039294-29039313 | Msa1148650:CDS | 35.0% |
| TGGATAGTAAAGCATGGAAA+TGG | - | chr7_4:29039314-29039333 | Msa1148650:CDS | 35.0% | |
| GGATAGTAAAGCATGGAAAT+GGG | - | chr7_4:29039315-29039334 | Msa1148650:CDS | 35.0% | |
| GATAGTAAAGCATGGAAATG+GGG | - | chr7_4:29039316-29039335 | Msa1148650:CDS | 35.0% | |
| TTCCAATTGTTGAAATTGGG+AGG | - | chr7_4:29039473-29039492 | Msa1148650:intron | 35.0% | |
| TACCTCCCAATTTCAACAAT+TGG | + | chr7_4:29039478-29039497 | None:intergenic | 35.0% | |
| !! | TGTTGAAATTGGGAGGTATT+TGG | - | chr7_4:29039480-29039499 | Msa1148650:intron | 35.0% |
| AGGTATTTGGAGGATTCTTA+TGG | - | chr7_4:29039493-29039512 | Msa1148650:intron | 35.0% | |
| GTGATAAGAGTTTAAAAGGG+AGG | - | chr7_4:29039536-29039555 | Msa1148650:intron | 35.0% | |
| AAGAGTTTAAAAGGGAGGTT+AGG | - | chr7_4:29039541-29039560 | Msa1148650:intron | 35.0% | |
| AGAGTTTAAAAGGGAGGTTA+GGG | - | chr7_4:29039542-29039561 | Msa1148650:intron | 35.0% | |
| GGGATTATTGATAGGAATGA+TGG | - | chr7_4:29039646-29039665 | Msa1148650:intron | 35.0% | |
| AAATGTTGATCAAAGAGGGT+TGG | - | chr7_4:29039732-29039751 | Msa1148650:intron | 35.0% | |
| ! | GTTTATTGATATGCCCGTTT+TGG | - | chr7_4:29039797-29039816 | Msa1148650:intron | 35.0% |
| AGTTGAGCGAAAAACCAAAA+CGG | + | chr7_4:29039814-29039833 | None:intergenic | 35.0% | |
| CTTGAAGTATACTACAGTCA+CGG | - | chr7_4:29039849-29039868 | Msa1148650:intron | 35.0% | |
| GTTAACGTCATTCGAGTATA+TGG | - | chr7_4:29039998-29040017 | Msa1148650:intron | 35.0% | |
| GTTAGTGACGTTCAAAATTG+TGG | + | chr7_4:29040100-29040119 | None:intergenic | 35.0% | |
| ! | ATCCAGTCTTTTTACCTTCT+TGG | - | chr7_4:29040493-29040512 | Msa1148650:intron | 35.0% |
| AACCAAGAAGGTAAAAAGAC+TGG | + | chr7_4:29040498-29040517 | None:intergenic | 35.0% | |
| AAAAGCTAGTGAAACCAAGA+AGG | + | chr7_4:29040510-29040529 | None:intergenic | 35.0% | |
| !!! | CTTGGTTTCACTAGCTTTTT+TGG | - | chr7_4:29040511-29040530 | Msa1148650:intron | 35.0% |
| TTTAGTGTTCTTCTCTGCAT+GGG | - | chr7_4:29040560-29040579 | Msa1148650:intron | 35.0% | |
| ! | CATTTTTGCACTTTCTTCAG+CGG | - | chr7_4:29040658-29040677 | Msa1148650:intron | 35.0% |
| ! | ATTTTTGCACTTTCTTCAGC+GGG | - | chr7_4:29040659-29040678 | Msa1148650:intron | 35.0% |
| !! | AATGACGATGATGGAAAGAA+TGG | - | chr7_4:29040722-29040741 | Msa1148650:intron | 35.0% |
| AAAGAATGGTGAAGCTAGTA+TGG | - | chr7_4:29040736-29040755 | Msa1148650:intron | 35.0% | |
| AAATTGAGTATTAGGGCAAC+TGG | + | chr7_4:29040809-29040828 | None:intergenic | 35.0% | |
| CCTTGGTGAAATTGAGTATT+AGG | + | chr7_4:29040817-29040836 | None:intergenic | 35.0% | |
| CCTAATACTCAATTTCACCA+AGG | - | chr7_4:29040814-29040833 | Msa1148650:intron | 35.0% | |
| !! | TTCTTTGGAGTTTGATGAAG+TGG | - | chr7_4:29040916-29040935 | Msa1148650:intron | 35.0% |
| ! | ATAATCGAAGCCTTTTACCA+GGG | + | chr7_4:29041115-29041134 | None:intergenic | 35.0% |
| ! | AATAATCGAAGCCTTTTACC+AGG | + | chr7_4:29041116-29041135 | None:intergenic | 35.0% |
| ACCAAGAGTAAAGGGTAAAT+GGG | + | chr7_4:29041171-29041190 | None:intergenic | 35.0% | |
| TGCAAATATGAGCATTCTCT+TGG | - | chr7_4:29041215-29041234 | Msa1148650:intron | 35.0% | |
| !! | CTCCTTTAAGGGTTCTTTTT+AGG | - | chr7_4:29041248-29041267 | Msa1148650:intron | 35.0% |
| GTCCTAAAAAGAACCCTTAA+AGG | + | chr7_4:29041253-29041272 | None:intergenic | 35.0% | |
| !!! | GGTTCTTTTTAGGACGAATT+TGG | - | chr7_4:29041258-29041277 | Msa1148650:intron | 35.0% |
| TAAAGTGGAATTCGCTTTAG+AGG | + | chr7_4:29041445-29041464 | None:intergenic | 35.0% | |
| AAAGCGAATTCCACTTTAGA+AGG | - | chr7_4:29041447-29041466 | Msa1148650:intron | 35.0% | |
| ! | AGATTTGTCTCCTTCTAAAG+TGG | + | chr7_4:29041460-29041479 | None:intergenic | 35.0% |
| ! | ACCGAAGCTTAACATTTTGA+AGG | + | chr7_4:29041660-29041679 | None:intergenic | 35.0% |
| TTTGCTTGGATGGTAATAAG+AGG | - | chr7_4:29041722-29041741 | Msa1148650:intron | 35.0% | |
| GAATTTAAGAAACGGTTCAG+GGG | - | chr7_4:29041957-29041976 | Msa1148650:CDS | 35.0% | |
| TTCCATCTGTTATGAGATCT+GGG | - | chr7_4:29041996-29042015 | Msa1148650:CDS | 35.0% | |
| !! | CATCTTAAGTATTGGTCAAG+AGG | - | chr7_4:29042169-29042188 | Msa1148650:CDS | 35.0% |
| ATTAGCTGAATACATCTTGG+CGG | - | chr7_4:29042198-29042217 | Msa1148650:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | - | chr7_4:29042314-29042333 | Msa1148650:intron | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | - | chr7_4:29042315-29042334 | Msa1148650:intron | 35.0% | |
| CATAAAATATGCAAGGTCTG+GGG | - | chr7_4:29042316-29042335 | Msa1148650:intron | 35.0% | |
| CACAACATGGTACTAACAAT+TGG | + | chr7_4:29042652-29042671 | None:intergenic | 35.0% | |
| CAACAAAGATTTGCACAACA+TGG | + | chr7_4:29042665-29042684 | None:intergenic | 35.0% | |
| CATGTTGTGCAAATCTTTGT+TGG | - | chr7_4:29042663-29042682 | Msa1148650:intron | 35.0% | |
| TACAACTTTGCATCTGTACA+TGG | - | chr7_4:29042819-29042838 | Msa1148650:CDS | 35.0% | |
| ACATGGTGAGTCATCTTAAA+AGG | + | chr7_4:29042912-29042931 | None:intergenic | 35.0% | |
| TTAAGATGACTCACCATGTT+TGG | - | chr7_4:29042913-29042932 | Msa1148650:CDS | 35.0% | |
| ! | CCGTCACATTATTTTCATCT+TGG | - | chr7_4:29042986-29043005 | Msa1148650:CDS | 35.0% |
| ! | GAAAGGATACGTGGATTAAA+GGG | + | chr7_4:29043170-29043189 | None:intergenic | 35.0% |
| ATGTGCTGAGTGATTACTTA+TGG | - | chr7_4:29043253-29043272 | Msa1148650:CDS | 35.0% | |
| TGTGCTGAGTGATTACTTAT+GGG | - | chr7_4:29043254-29043273 | Msa1148650:CDS | 35.0% | |
| CTTTGCTGGAATCAATATTC+CGG | - | chr7_4:29043419-29043438 | Msa1148650:five_prime_UTR | 35.0% | |
| !! | GATTTGCTAAAAGTTTCGAC+CGG | + | chr7_4:29043441-29043460 | None:intergenic | 35.0% |
| CAGTGAAGAATAAGAACTAG+AGG | - | chr7_4:29043682-29043701 | Msa1148650:five_prime_UTR | 35.0% | |
| TGTCGGATAATCAAAATCGG+TGG | + | chr7_4:29039070-29039089 | None:intergenic | 40.0% | |
| !!! | ACCGATTTTGATTATCCGAC+AGG | - | chr7_4:29039069-29039088 | Msa1148650:three_prime_UTR | 40.0% |
| !! | ACGACTCTTTTGTAGCTTGT+AGG | - | chr7_4:29039153-29039172 | Msa1148650:CDS | 40.0% |
| AAAGCATGGAAATGGGGTTT+AGG | - | chr7_4:29039322-29039341 | Msa1148650:CDS | 40.0% | |
| !! | TGAAATTGGGAGGTATTTGG+AGG | - | chr7_4:29039483-29039502 | Msa1148650:intron | 40.0% |
| GAGTTTAAAAGGGAGGTTAG+GGG | - | chr7_4:29039543-29039562 | Msa1148650:intron | 40.0% | |
| TTGGTTATTGATGAGGTGGA+TGG | - | chr7_4:29039625-29039644 | Msa1148650:intron | 40.0% | |
| TGGTTATTGATGAGGTGGAT+GGG | - | chr7_4:29039626-29039645 | Msa1148650:intron | 40.0% | |
| AGGTGGATGGGATTATTGAT+AGG | - | chr7_4:29039638-29039657 | Msa1148650:intron | 40.0% | |
| AAAGAGGGTTGGATGAGAAA+GGG | - | chr7_4:29039743-29039762 | Msa1148650:intron | 40.0% | |
| GTTGAGCGAAAAACCAAAAC+GGG | + | chr7_4:29039813-29039832 | None:intergenic | 40.0% | |
| CGTGACTGTAGTATACTTCA+AGG | + | chr7_4:29039851-29039870 | None:intergenic | 40.0% | |
| CGTCACTAACCATGATTTCT+AGG | - | chr7_4:29040110-29040129 | Msa1148650:intron | 40.0% | |
| CTTTAGTGTTCTTCTCTGCA+TGG | - | chr7_4:29040559-29040578 | Msa1148650:intron | 40.0% | |
| ! | AGTCTTGGTGATTCACAATC+TGG | - | chr7_4:29040599-29040618 | Msa1148650:intron | 40.0% |
| GCAAAAATGTCTCCAAGAAG+AGG | + | chr7_4:29040647-29040666 | None:intergenic | 40.0% | |
| GCGAATAAGGGTGATATACA+CGG | + | chr7_4:29040693-29040712 | None:intergenic | 40.0% | |
| GCTCAGTTTCTTGGATTTCT+GGG | - | chr7_4:29040758-29040777 | Msa1148650:intron | 40.0% | |
| CTCAGTTTCTTGGATTTCTG+GGG | - | chr7_4:29040759-29040778 | Msa1148650:intron | 40.0% | |
| CATATAAAAAGGTTCGGCCT+TGG | + | chr7_4:29040834-29040853 | None:intergenic | 40.0% | |
| AAGCAGCTTGGTCTGATTAT+TGG | - | chr7_4:29040863-29040882 | Msa1148650:intron | 40.0% | |
| CTTGGTCTGATTATTGGCAA+AGG | - | chr7_4:29040869-29040888 | Msa1148650:intron | 40.0% | |
| TCCCATTTACCCTTTACTCT+TGG | - | chr7_4:29041167-29041186 | Msa1148650:intron | 40.0% | |
| CACCAAGAGTAAAGGGTAAA+TGG | + | chr7_4:29041172-29041191 | None:intergenic | 40.0% | |
| AGCATTCTCTTGGACGAATT+TGG | - | chr7_4:29041225-29041244 | Msa1148650:intron | 40.0% | |
| ! | GACGAATTTGGCTCCTTTAA+GGG | - | chr7_4:29041237-29041256 | Msa1148650:intron | 40.0% |
| ! | GACGAATTTGGCTCCTTTAA+GGG | - | chr7_4:29041237-29041256 | Msa1148650:intron | 40.0% |
| GACAAATCTCGTTTAGACCT+TGG | - | chr7_4:29041471-29041490 | Msa1148650:intron | 40.0% | |
| AACCACTATAGGGTTGACAT+TGG | - | chr7_4:29041566-29041585 | Msa1148650:intron | 40.0% | |
| AACCAATGTCAACCCTATAG+TGG | + | chr7_4:29041571-29041590 | None:intergenic | 40.0% | |
| GAAGGTAAAAAGTTTGCACC+AGG | + | chr7_4:29041642-29041661 | None:intergenic | 40.0% | |
| AGCTTCATACCATTTCGCTT+TGG | - | chr7_4:29041872-29041891 | Msa1148650:CDS | 40.0% | |
| GTTCCATCTGTTATGAGATC+TGG | - | chr7_4:29041995-29042014 | Msa1148650:CDS | 40.0% | |
| TTCCCAGATCTCATAACAGA+TGG | + | chr7_4:29042001-29042020 | None:intergenic | 40.0% | |
| ATCTGTTATGAGATCTGGGA+AGG | - | chr7_4:29042000-29042019 | Msa1148650:CDS | 40.0% | |
| TCTGTTATGAGATCTGGGAA+GGG | - | chr7_4:29042001-29042020 | Msa1148650:CDS | 40.0% | |
| !! | ACACATGAGAAGTGTTCCAT+TGG | + | chr7_4:29042125-29042144 | None:intergenic | 40.0% |
| TTAGCTGAATACATCTTGGC+GGG | - | chr7_4:29042199-29042218 | Msa1148650:intron | 40.0% | |
| !!! | ATTCTTTTTTTGGTGGTGGC+CGG | + | chr7_4:29042349-29042368 | None:intergenic | 40.0% |
| ! | GGAAAGGATACGTGGATTAA+AGG | + | chr7_4:29043171-29043190 | None:intergenic | 40.0% |
| TAGAATGAGGAAAGGATACG+TGG | + | chr7_4:29043179-29043198 | None:intergenic | 40.0% | |
| TGATGTTAGAAGAACAGCCT+TGG | + | chr7_4:29043280-29043299 | None:intergenic | 40.0% | |
| ACTCACAATTCAAGTCCCAT+TGG | - | chr7_4:29043320-29043339 | Msa1148650:CDS | 40.0% | |
| ATCAACAGAAACTACTGCTG+TGG | - | chr7_4:29043458-29043477 | Msa1148650:five_prime_UTR | 40.0% | |
| ACACAGTACGATGTACCTGT+CGG | + | chr7_4:29039087-29039106 | None:intergenic | 45.0% | |
| GTGCAATCTGTTGTAGATGC+CGG | - | chr7_4:29039397-29039416 | Msa1148650:CDS | 45.0% | |
| CTTAGAGATAATGAGGCGAG+CGG | - | chr7_4:29039586-29039605 | Msa1148650:intron | 45.0% | |
| ! | GGAGTCGTTGGTTATTGATG+AGG | - | chr7_4:29039618-29039637 | Msa1148650:intron | 45.0% |
| ! | GTCGTTGGTTATTGATGAGG+TGG | - | chr7_4:29039621-29039640 | Msa1148650:intron | 45.0% |
| !! | TGGTTCTGAATTGCTGCCTT+CGG | - | chr7_4:29039666-29039685 | Msa1148650:intron | 45.0% |
| GGATGATGTAGTTGGAGGAT+TGG | - | chr7_4:29039687-29039706 | Msa1148650:intron | 45.0% | |
| ! | GATGTAGTTGGAGGATTGGT+TGG | - | chr7_4:29039691-29039710 | Msa1148650:intron | 45.0% |
| !! | TAGTTGGAGGATTGGTTGGT+CGG | - | chr7_4:29039695-29039714 | Msa1148650:intron | 45.0% |
| CAAAGAGGGTTGGATGAGAA+AGG | - | chr7_4:29039742-29039761 | Msa1148650:intron | 45.0% | |
| ACAGTCACGGTGAGTGAATT+TGG | - | chr7_4:29039862-29039881 | Msa1148650:intron | 45.0% | |
| GTTGCCTCAAATCCTCTTCT+TGG | - | chr7_4:29040632-29040651 | Msa1148650:intron | 45.0% | |
| GTCTCCAAGAAGAGGATTTG+AGG | + | chr7_4:29040639-29040658 | None:intergenic | 45.0% | |
| GCTAGTATGGCTCAGTTTCT+TGG | - | chr7_4:29040749-29040768 | Msa1148650:intron | 45.0% | |
| GGCTCAGTTTCTTGGATTTC+TGG | - | chr7_4:29040757-29040776 | Msa1148650:intron | 45.0% | |
| ATGCTTACTTGGAAGCAGCT+TGG | - | chr7_4:29040851-29040870 | Msa1148650:intron | 45.0% | |
| ! | GGACGAATTTGGCTCCTTTA+AGG | - | chr7_4:29041236-29041255 | Msa1148650:intron | 45.0% |
| ! | GGACGAATTTGGCTCCTTTA+AGG | - | chr7_4:29041236-29041255 | Msa1148650:intron | 45.0% |
| AGAAGGCTACCAAAGCGAAA+TGG | + | chr7_4:29041884-29041903 | None:intergenic | 45.0% | |
| !!! | TTCTTTTTTTGGTGGTGGCC+GGG | + | chr7_4:29042348-29042367 | None:intergenic | 45.0% |
| TGACGTTCTTAGTGAGAAGC+TGG | - | chr7_4:29042589-29042608 | Msa1148650:intron | 45.0% | |
| !!! | CCAGCAATCCTGGTTTTGAT+AGG | + | chr7_4:29043230-29043249 | None:intergenic | 45.0% |
| CCTATCAAAACCAGGATTGC+TGG | - | chr7_4:29043227-29043246 | Msa1148650:CDS | 45.0% | |
| GAGTGATTACTTATGGGCCA+AGG | - | chr7_4:29043260-29043279 | Msa1148650:CDS | 45.0% | |
| TATCGACAATGGCAGCCAAT+GGG | + | chr7_4:29043338-29043357 | None:intergenic | 45.0% | |
| !! | TCCAGTGATGGTATCGACAA+TGG | + | chr7_4:29043349-29043368 | None:intergenic | 45.0% |
| GGAGCAATAGCTGTCATGAT+CGG | - | chr7_4:29043396-29043415 | Msa1148650:five_prime_UTR | 45.0% | |
| GCAGCTGAATCTTGTGTTCT+TGG | + | chr7_4:29043531-29043550 | None:intergenic | 45.0% | |
| !!! | ATTATTTTTTGTTTTTTTAT+TGG | - | chr7_4:29042698-29042717 | Msa1148650:intron | 5.0% |
| AACAAGAAACGGCGAGACAC+CGG | + | chr7_4:29039419-29039438 | None:intergenic | 50.0% | |
| CTGCCTTCGGATGATGTAGT+TGG | - | chr7_4:29039679-29039698 | Msa1148650:intron | 50.0% | |
| CCTCCAACTACATCATCCGA+AGG | + | chr7_4:29039685-29039704 | None:intergenic | 50.0% | |
| CCTTCGGATGATGTAGTTGG+AGG | - | chr7_4:29039682-29039701 | Msa1148650:intron | 50.0% | |
| !! | AGTTGGAGGATTGGTTGGTC+GGG | - | chr7_4:29039696-29039715 | Msa1148650:intron | 50.0% |
| !! | ATTGGTTGGTCGGGTTGGTT+TGG | - | chr7_4:29039705-29039724 | Msa1148650:intron | 50.0% |
| AGTGTTCTTCTCTGCATGGG+AGG | - | chr7_4:29040563-29040582 | Msa1148650:intron | 50.0% | |
| TCCAACCCAACCCTGGTAAA+AGG | - | chr7_4:29041102-29041121 | Msa1148650:intron | 50.0% | |
| ! | CGAAGCCTTTTACCAGGGTT+GGG | + | chr7_4:29041110-29041129 | None:intergenic | 50.0% |
| ! | TCGAAGCCTTTTACCAGGGT+TGG | + | chr7_4:29041111-29041130 | None:intergenic | 50.0% |
| GGGCATGCACCAAGAGTAAA+GGG | + | chr7_4:29041179-29041198 | None:intergenic | 50.0% | |
| AGGGCATGCACCAAGAGTAA+AGG | + | chr7_4:29041180-29041199 | None:intergenic | 50.0% | |
| TCGCTAAAGCTGCTACTCAC+AGG | + | chr7_4:29041531-29041550 | None:intergenic | 50.0% | |
| CAGCAGTCAACCAAGTCACA+GGG | + | chr7_4:29041934-29041953 | None:intergenic | 50.0% | |
| ACAGATGGAACCTCGTGACT+AGG | + | chr7_4:29041986-29042005 | None:intergenic | 50.0% | |
| AAGTCCTCGTGAGCTTAGCT+CGG | - | chr7_4:29042278-29042297 | Msa1148650:intron | 50.0% | |
| ! | TGAGCTTAGCTCGGTTGGTA+TGG | - | chr7_4:29042287-29042306 | Msa1148650:intron | 50.0% |
| AGCACATTGTCCAGCAATCC+TGG | + | chr7_4:29043240-29043259 | None:intergenic | 50.0% | |
| TCAACCACAGTAGCTACAGC+TGG | - | chr7_4:29043297-29043316 | Msa1148650:CDS | 50.0% | |
| ! | GTATCGACAATGGCAGCCAA+TGG | + | chr7_4:29043339-29043358 | None:intergenic | 50.0% |
| GCCATTGTCGATACCATCAC+TGG | - | chr7_4:29043345-29043364 | Msa1148650:CDS | 50.0% | |
| TGGACATTCTCCTCCCTTCA+TGG | - | chr7_4:29043365-29043384 | Msa1148650:exon | 50.0% | |
| ! | CCTCCCTTCATGGATTACCT+CGG | - | chr7_4:29043375-29043394 | Msa1148650:exon | 50.0% |
| GCTCCGAGGTAATCCATGAA+GGG | + | chr7_4:29043381-29043400 | None:intergenic | 50.0% | |
| TGCTCCGAGGTAATCCATGA+AGG | + | chr7_4:29043382-29043401 | None:intergenic | 50.0% | |
| TCATGACAGCTATTGCTCCG+AGG | + | chr7_4:29043395-29043414 | None:intergenic | 50.0% | |
| ! | GGTTGGATGAGAAAGGGCGT+TGG | - | chr7_4:29039749-29039768 | Msa1148650:intron | 55.0% |
| CTATGCATCCAACCCAACCC+TGG | - | chr7_4:29041095-29041114 | Msa1148650:intron | 55.0% | |
| ! | GCCTTTTACCAGGGTTGGGT+TGG | + | chr7_4:29041106-29041125 | None:intergenic | 55.0% |
| GTCAACCAAGTCACAGGGTG+CGG | + | chr7_4:29041929-29041948 | None:intergenic | 55.0% | |
| GCAGCAGTCAACCAAGTCAC+AGG | + | chr7_4:29041935-29041954 | None:intergenic | 55.0% | |
| GAGTCCAGCTGTAGCTACTG+TGG | + | chr7_4:29043304-29043323 | None:intergenic | 55.0% | |
| GGGAGGAGAATGTCCAGTGA+TGG | + | chr7_4:29043361-29043380 | None:intergenic | 55.0% | |
| CCGAGGTAATCCATGAAGGG+AGG | + | chr7_4:29043378-29043397 | None:intergenic | 55.0% | |
| ! | GCTGTCATGATCGGCTTTGC+TGG | - | chr7_4:29043405-29043424 | Msa1148650:five_prime_UTR | 55.0% |
| GAGGTTAGGGGAGTCAGAGC+AGG | - | chr7_4:29039555-29039574 | Msa1148650:intron | 60.0% | |
| CGGTGAAGCTGTGGAGTCGT+TGG | - | chr7_4:29039606-29039625 | Msa1148650:intron | 60.0% | |
| !! | GGAGGATTGGTTGGTCGGGT+TGG | - | chr7_4:29039700-29039719 | Msa1148650:intron | 60.0% |
| CACTTCCGCACCCTGTGACT+TGG | - | chr7_4:29041921-29041940 | Msa1148650:CDS | 60.0% | |
| TCAGGGGTAGCCTAGTCACG+AGG | - | chr7_4:29041973-29041992 | Msa1148650:CDS | 60.0% | |
| CCAACCGAGCTAAGCTCACG+AGG | + | chr7_4:29042285-29042304 | None:intergenic | 60.0% | |
| CCTCGTGAGCTTAGCTCGGT+TGG | - | chr7_4:29042282-29042301 | Msa1148650:intron | 60.0% | |
| ! | CAAGGTCTGGGGTTCGAACC+CGG | - | chr7_4:29042327-29042346 | Msa1148650:intron | 60.0% |
| TGAGGCGAGCGGTGAAGCTG+TGG | - | chr7_4:29039597-29039616 | Msa1148650:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 29038945 | 29043732 | 29038945 | ID=Msa1148650;Name=Msa1148650 |
| chr7_4 | mRNA | 29038945 | 29043732 | 29038945 | ID=Msa1148650-mRNA-1;Parent=Msa1148650;Name=Msa1148650-mRNA-1;_AED=0.00;_eAED=0.00;_QI=350|1|1|1|1|1|3|172|438 |
| chr7_4 | exon | 29038945 | 29039436 | 29038945 | ID=Msa1148650-mRNA-1:exon:7150;Parent=Msa1148650-mRNA-1 |
| chr7_4 | exon | 29041787 | 29042207 | 29041787 | ID=Msa1148650-mRNA-1:exon:7149;Parent=Msa1148650-mRNA-1 |
| chr7_4 | exon | 29042807 | 29043732 | 29042807 | ID=Msa1148650-mRNA-1:exon:7148;Parent=Msa1148650-mRNA-1 |
| chr7_4 | five_prime_UTR | 29043383 | 29043732 | 29043383 | ID=Msa1148650-mRNA-1:five_prime_utr;Parent=Msa1148650-mRNA-1 |
| chr7_4 | CDS | 29042807 | 29043382 | 29042807 | ID=Msa1148650-mRNA-1:cds;Parent=Msa1148650-mRNA-1 |
| chr7_4 | CDS | 29041787 | 29042207 | 29041787 | ID=Msa1148650-mRNA-1:cds;Parent=Msa1148650-mRNA-1 |
| chr7_4 | CDS | 29039117 | 29039436 | 29039117 | ID=Msa1148650-mRNA-1:cds;Parent=Msa1148650-mRNA-1 |
| chr7_4 | three_prime_UTR | 29038945 | 29039116 | 29038945 | ID=Msa1148650-mRNA-1:three_prime_utr;Parent=Msa1148650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
