Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155350 | XP_013467234.2 | 97.845 | 464 | 10 | 0 | 1 | 464 | 1 | 464 | 0.0 | 949 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155350 | sp|Q6DW73|DGDG2_LOTJA | 85.466 | 461 | 66 | 1 | 1 | 461 | 1 | 460 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155350 | A0A396JR80 | 97.845 | 464 | 10 | 0 | 1 | 464 | 1 | 464 | 0.0 | 949 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0120340 | Msa1155350 | 0.805746 | 1.150216e-49 | -8.615850e-47 |
| Msa0621750 | Msa1155350 | -0.801535 | 8.602028e-49 | -8.615850e-47 |
| Msa1155350 | Msa1174310 | 0.807911 | 4.009891e-50 | -8.615850e-47 |
| Msa1155350 | Msa1199070 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa1155350 | Msa1230830 | 0.810070 | 1.383688e-50 | -8.615850e-47 |
| Msa1155350 | Msa1276510 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa1155350 | Msa1314770 | 0.815013 | 1.148714e-51 | -8.615850e-47 |
| Msa1155350 | Msa1378230 | 0.803649 | 3.151282e-49 | -8.615850e-47 |
| Msa1155350 | Msa1451620 | -0.813176 | 2.922307e-51 | -8.615850e-47 |
| Msa0876850 | Msa1155350 | -0.816842 | 4.488819e-52 | -8.615850e-47 |
| Msa0942080 | Msa1155350 | -0.816663 | 4.923136e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155350 | MtrunA17_Chr1g0169821 | 97.845 | 464 | 10 | 0 | 1 | 464 | 1 | 464 | 0.0 | 949 |
| Msa1155350 | MtrunA17_Chr6g0487971 | 97.845 | 464 | 10 | 0 | 1 | 464 | 1 | 464 | 0.0 | 946 |
| Msa1155350 | MtrunA17_Chr7g0246881 | 97.509 | 281 | 7 | 0 | 184 | 464 | 9 | 289 | 0.0 | 576 |
| Msa1155350 | MtrunA17_Chr7g0267461 | 56.277 | 462 | 195 | 2 | 2 | 456 | 305 | 766 | 0.0 | 553 |
| Msa1155350 | MtrunA17_Chr1g0177731 | 56.156 | 463 | 194 | 2 | 2 | 456 | 247 | 708 | 0.0 | 551 |
| Msa1155350 | MtrunA17_Chr7g0246871 | 91.919 | 198 | 16 | 0 | 1 | 198 | 1 | 198 | 4.23e-132 | 380 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155350 | AT4G00550.1 | 69.762 | 463 | 128 | 2 | 3 | 459 | 5 | 461 | 0.0 | 687 |
| Msa1155350 | AT4G00550.2 | 69.762 | 463 | 128 | 2 | 3 | 459 | 5 | 461 | 0.0 | 687 |
| Msa1155350 | AT3G11670.1 | 57.112 | 457 | 195 | 1 | 2 | 458 | 341 | 796 | 0.0 | 560 |
| Msa1155350 | AT3G11670.2 | 63.423 | 298 | 109 | 0 | 2 | 299 | 341 | 638 | 3.03e-144 | 427 |
Find 124 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTGAGCTTGATTTATT+TGG | 0.144016 | 7_4:+43263422 | Msa1155350:CDS |
| TTGCCAATCTCAAGGAATTT+TGG | 0.146808 | 7_4:-43263266 | None:intergenic |
| TAGTTATTACTTCATTTAAA+TGG | 0.153242 | 7_4:-43264448 | None:intergenic |
| GAAATATCACGAAGAATATT+TGG | 0.214260 | 7_4:+43264087 | Msa1155350:CDS |
| ACTAAATTCAAGCTAGTTAT+AGG | 0.218058 | 7_4:+43261977 | Msa1155350:CDS |
| TACTGAAATATTTAAACAAC+TGG | 0.236042 | 7_4:+43262065 | Msa1155350:CDS |
| TTGTTTAATTTATTCCTAAA+AGG | 0.240043 | 7_4:+43264227 | Msa1155350:three_prime_UTR |
| TTTGTACATCATTTAGCTTC+TGG | 0.241868 | 7_4:+43264060 | Msa1155350:CDS |
| CTTCACATATGCTAAATAAT+TGG | 0.293385 | 7_4:-43262011 | None:intergenic |
| CTTGGGTTTGCTAATACTTC+CGG | 0.295745 | 7_4:+43264156 | Msa1155350:CDS |
| TTGTACATCATTTAGCTTCT+GGG | 0.302122 | 7_4:+43264061 | Msa1155350:CDS |
| CCCAATAAAATAGGCACCTT+TGG | 0.302385 | 7_4:-43263330 | None:intergenic |
| GCGGCGTATCTTTACAAAAC+TGG | 0.313358 | 7_4:+43261284 | Msa1155350:CDS |
| AAAAGGGAGCAACAACAAAA+TGG | 0.334720 | 7_4:+43263293 | Msa1155350:CDS |
| GAATAGATGTATGTTAAATA+AGG | 0.336114 | 7_4:+43264319 | Msa1155350:three_prime_UTR |
| AATCCAAAATTCCTTGAGAT+TGG | 0.337913 | 7_4:+43263263 | Msa1155350:CDS |
| TTGGGTTTGCTAATACTTCC+GGG | 0.353992 | 7_4:+43264157 | Msa1155350:CDS |
| AGTTATTACTTCATTTAAAT+GGG | 0.356868 | 7_4:-43264447 | None:intergenic |
| CTCAGAGACATGACCTTTCA+TGG | 0.359652 | 7_4:+43263902 | Msa1155350:CDS |
| TTATTATACGTCCAACAATT+CGG | 0.376531 | 7_4:-43263814 | None:intergenic |
| AGAGAAGTTAAAACCTTTCC+CGG | 0.376949 | 7_4:-43261473 | None:intergenic |
| TATTTAAACAACTGGGTTGT+TGG | 0.378794 | 7_4:+43262073 | Msa1155350:CDS |
| TATTATACGTCCAACAATTC+GGG | 0.384577 | 7_4:-43263813 | None:intergenic |
| GAACAGCTGCGCAAGGAACT+TGG | 0.388690 | 7_4:+43264138 | Msa1155350:CDS |
| GAGAGGATTCACTGCGGTTC+CGG | 0.390480 | 7_4:-43261255 | None:intergenic |
| TTTGATGATCATTAAGAAGT+TGG | 0.397207 | 7_4:-43263388 | None:intergenic |
| GATAGAGTTGGATTTGCATC+TGG | 0.404327 | 7_4:+43261431 | Msa1155350:CDS |
| CAAATGCTCTCTTTCTAGTC+AGG | 0.408815 | 7_4:+43264270 | Msa1155350:three_prime_UTR |
| GCTAATACTTCCGGGACATA+AGG | 0.416360 | 7_4:+43264165 | Msa1155350:CDS |
| ATTTAACATACATCTATTCA+AGG | 0.417926 | 7_4:-43264315 | None:intergenic |
| TGTAGGTTGGCCAGGTTCTT+CGG | 0.421554 | 7_4:-43263875 | None:intergenic |
| ATTTGTTGCACTAACACTTA+AGG | 0.421892 | 7_4:+43263846 | Msa1155350:CDS |
| GCAATATCTGCATCTTTGTC+GGG | 0.426060 | 7_4:-43261899 | None:intergenic |
| TCCTTGCGCAGCTGTTCATC+AGG | 0.426561 | 7_4:-43264132 | None:intergenic |
| TGCCACAGAACGGTTTCTTA+AGG | 0.434818 | 7_4:+43263930 | Msa1155350:CDS |
| AGCAATATCTGCATCTTTGT+CGG | 0.434996 | 7_4:-43261900 | None:intergenic |
| ATTTGATTCTCCTGCTGAGC+AGG | 0.437343 | 7_4:+43261382 | Msa1155350:CDS |
| ATATATTTCTCCTGCTCAGC+AGG | 0.438166 | 7_4:-43261392 | None:intergenic |
| TTACTTCATTTAAATGGGGT+TGG | 0.445891 | 7_4:-43264442 | None:intergenic |
| TGAGCGTCTGTAGGTTGGCC+AGG | 0.448419 | 7_4:-43263883 | None:intergenic |
| ACGCAAGTTCCGAGGATCTC+TGG | 0.459708 | 7_4:-43260614 | None:intergenic |
| CTGGTGATTCACTAAATAGA+TGG | 0.470850 | 7_4:+43261181 | Msa1155350:exon |
| TCAAGCAGTTCCCGAATTGT+TGG | 0.473634 | 7_4:+43263803 | Msa1155350:CDS |
| TGAAACCACGTCAGGTGCTC+AGG | 0.478911 | 7_4:-43261935 | None:intergenic |
| GAATCAAATGTAATATTGTT+CGG | 0.479223 | 7_4:-43261368 | None:intergenic |
| GAGCTTGATTTATTTGGAAG+TGG | 0.481488 | 7_4:+43263428 | Msa1155350:CDS |
| TGTTTAGCATCAGTAAATGT+TGG | 0.485061 | 7_4:+43264348 | Msa1155350:three_prime_UTR |
| ACCTGACGTGGTTTCATCAT+GGG | 0.487469 | 7_4:+43261942 | Msa1155350:CDS |
| AAAATAGGCACCTTTGGTAA+AGG | 0.489213 | 7_4:-43263324 | None:intergenic |
| AAGAAAAGAAGAGGAAAGAG+TGG | 0.489663 | 7_4:-43260717 | None:intergenic |
| TTACTACTGCTAGCCTTCCA+TGG | 0.489976 | 7_4:+43261228 | Msa1155350:CDS |
| AACGAAGGAAGATGAGGAGA+AGG | 0.490959 | 7_4:-43260682 | None:intergenic |
| ACGTTACAGACGATGGATCC+AGG | 0.490962 | 7_4:-43263230 | None:intergenic |
| TCCCATGATGAAACCACGTC+AGG | 0.494601 | 7_4:-43261943 | None:intergenic |
| CACCTGACGTGGTTTCATCA+TGG | 0.497598 | 7_4:+43261941 | Msa1155350:CDS |
| ACTTCTTAATGATCATCAAA+AGG | 0.501038 | 7_4:+43263391 | Msa1155350:CDS |
| GCTAGCCTTCCATGGTTGAC+CGG | 0.501730 | 7_4:+43261236 | Msa1155350:CDS |
| CGGCGTATCTTTACAAAACT+GGG | 0.511338 | 7_4:+43261285 | Msa1155350:CDS |
| GTCTCTGAGCGTCTGTAGGT+TGG | 0.512130 | 7_4:-43263888 | None:intergenic |
| ACAGCAGAAGCTTTAGCAAT+GGG | 0.513714 | 7_4:+43263739 | Msa1155350:CDS |
| GGTTTCATCATGGGAAAAGA+TGG | 0.513960 | 7_4:+43261951 | Msa1155350:CDS |
| TAATCCGAGCACAACGGATG+TGG | 0.516659 | 7_4:+43263705 | Msa1155350:CDS |
| AAAAGGAGCATTCTTGCTGT+TGG | 0.523213 | 7_4:+43261857 | Msa1155350:CDS |
| AACAGCTGCGCAAGGAACTT+GGG | 0.527333 | 7_4:+43264139 | Msa1155350:CDS |
| TTCACCTGAGTTGAGATGAC+TGG | 0.527891 | 7_4:+43264384 | Msa1155350:three_prime_UTR |
| ATGTCACCTTAGTGATCCCT+TGG | 0.535213 | 7_4:+43261315 | Msa1155350:CDS |
| TATGTGAAGAGAGAGAAGAA+TGG | 0.542493 | 7_4:+43262025 | Msa1155350:CDS |
| CTGTGGCAGCCTCCCATGAA+AGG | 0.544129 | 7_4:-43263915 | None:intergenic |
| CAACTCTATCCTCAAGCCAT+TGG | 0.545499 | 7_4:-43261418 | None:intergenic |
| CAGACTCTCTGCTGCCACTC+AGG | 0.546754 | 7_4:+43263202 | Msa1155350:CDS |
| CAATGGCTTGAGGATAGAGT+TGG | 0.551102 | 7_4:+43261419 | Msa1155350:CDS |
| GATATGGAGCAAAGGCTACA+AGG | 0.553823 | 7_4:+43263358 | Msa1155350:CDS |
| GAGTAAAACGAAGGAAGATG+AGG | 0.555469 | 7_4:-43260688 | None:intergenic |
| TCATGTCTCTGAGCGTCTGT+AGG | 0.555561 | 7_4:-43263892 | None:intergenic |
| GATCTTTCAAAGATAACCAA+GGG | 0.560893 | 7_4:-43261331 | None:intergenic |
| AGATACGCCGCACGAAAGAG+AGG | 0.561308 | 7_4:-43261272 | None:intergenic |
| CTAAATAGATGGATCGGAAG+CGG | 0.561352 | 7_4:+43261192 | Msa1155350:exon |
| CGGTTCCGGTCAACCATGGA+AGG | 0.562044 | 7_4:-43261241 | None:intergenic |
| GCTCTCTTTCTAGTCAGGAT+AGG | 0.564971 | 7_4:+43264275 | Msa1155350:three_prime_UTR |
| TTCTCTCAGATGGCTTGTCG+AGG | 0.566253 | 7_4:-43263960 | None:intergenic |
| CAAACCACATCCGTTGTGCT+CGG | 0.569463 | 7_4:-43263709 | None:intergenic |
| TCCATCGTCTGTAACGTTCA+CGG | 0.573540 | 7_4:+43263236 | Msa1155350:CDS |
| ATAGATCATCAGCATGATCA+CGG | 0.574367 | 7_4:-43263517 | None:intergenic |
| TCATCAGCATGATCACGGGC+TGG | 0.574420 | 7_4:-43263512 | None:intergenic |
| TGATTTATTTGGAAGTGGAG+AGG | 0.580445 | 7_4:+43263433 | Msa1155350:CDS |
| GGGAAAATGATATGGAGCAA+AGG | 0.581029 | 7_4:+43263350 | Msa1155350:CDS |
| TATTCCTAAAAGGTTGAGAG+TGG | 0.581859 | 7_4:+43264237 | Msa1155350:three_prime_UTR |
| GCTGCCACTCAGGATTACCC+TGG | 0.582424 | 7_4:+43263212 | Msa1155350:CDS |
| TAGATCATCAGCATGATCAC+GGG | 0.583241 | 7_4:-43263516 | None:intergenic |
| TGGTGAAGAGAGTAAAACGA+AGG | 0.583827 | 7_4:-43260697 | None:intergenic |
| AACAGCAGAAGCTTTAGCAA+TGG | 0.588210 | 7_4:+43263738 | Msa1155350:CDS |
| TTTCGTGTACGCAAGTTCCG+AGG | 0.590323 | 7_4:-43260622 | None:intergenic |
| AAGGCATTGACCGAAGAACC+TGG | 0.591551 | 7_4:+43263865 | Msa1155350:CDS |
| ACCTGATGAACAGCTGCGCA+AGG | 0.595923 | 7_4:+43264131 | Msa1155350:CDS |
| CATGGGAGGCTGCCACAGAA+CGG | 0.596043 | 7_4:+43263920 | Msa1155350:CDS |
| CGTTACAGACGATGGATCCA+GGG | 0.599851 | 7_4:-43263229 | None:intergenic |
| GATTCACTAAATAGATGGAT+CGG | 0.600986 | 7_4:+43261186 | Msa1155350:exon |
| ATTATCAAACCAGAGATCCT+CGG | 0.604100 | 7_4:+43260605 | Msa1155350:five_prime_UTR |
| AGATGGCTTGTCGAGGTCAA+CGG | 0.605038 | 7_4:-43263953 | None:intergenic |
| GTTATTACTTCATTTAAATG+GGG | 0.605613 | 7_4:-43264446 | None:intergenic |
| ACTGAAATATTTAAACAACT+GGG | 0.605638 | 7_4:+43262066 | Msa1155350:CDS |
| TGTACCTTGAAGAAAAGAAG+AGG | 0.607424 | 7_4:-43260726 | None:intergenic |
| AGGTTGCAAGCTATGTGGAA+TGG | 0.611035 | 7_4:-43264112 | None:intergenic |
| ACTGCGGTTCCGGTCAACCA+TGG | 0.611576 | 7_4:-43261245 | None:intergenic |
| AGATAACCAAGGGATCACTA+AGG | 0.614097 | 7_4:-43261321 | None:intergenic |
| ATATATTCGCCAATGGCTTG+AGG | 0.614734 | 7_4:+43261409 | Msa1155350:CDS |
| TGATCTTTCAAAGATAACCA+AGG | 0.616888 | 7_4:-43261332 | None:intergenic |
| TCATCAGGTTGCAAGCTATG+TGG | 0.617846 | 7_4:-43264117 | None:intergenic |
| TACACCAGTCATCTCAACTC+AGG | 0.622010 | 7_4:-43264388 | None:intergenic |
| TCAGAGACATGACCTTTCAT+GGG | 0.622611 | 7_4:+43263903 | Msa1155350:CDS |
| GGAGAGAATGCCTTTACCAA+AGG | 0.629227 | 7_4:+43263314 | Msa1155350:CDS |
| AGGAGAAATATATTCGCCAA+TGG | 0.635391 | 7_4:+43261402 | Msa1155350:CDS |
| ATATTTGCAACAGACAGTAG+AGG | 0.639543 | 7_4:+43264026 | Msa1155350:CDS |
| CAATATCTGCATCTTTGTCG+GGG | 0.643258 | 7_4:-43261898 | None:intergenic |
| GAGACATGACCTTTCATGGG+AGG | 0.648420 | 7_4:+43263906 | Msa1155350:CDS |
| TGTTGGTATATATTGTCACA+AGG | 0.651655 | 7_4:+43262090 | Msa1155350:CDS |
| GGCCTTAAGAAACCGTTCTG+TGG | 0.655311 | 7_4:-43263932 | None:intergenic |
| AAGAGCCTGAGCACCTGACG+TGG | 0.668878 | 7_4:+43261930 | Msa1155350:CDS |
| GTTTATTAATCCGAGCACAA+CGG | 0.673935 | 7_4:+43263699 | Msa1155350:CDS |
| GGATCCAGGGTAATCCTGAG+TGG | 0.704465 | 7_4:-43263216 | None:intergenic |
| AGTGAATCCTCTCTTTCGTG+CGG | 0.707766 | 7_4:+43261265 | Msa1155350:CDS |
| TTAGTGCAACAAATTCCTTG+TGG | 0.709459 | 7_4:-43263837 | None:intergenic |
| TTGGACGTATAATAACCACA+AGG | 0.783936 | 7_4:+43263822 | Msa1155350:CDS |
| ACGAAAGAGAGGATTCACTG+CGG | 0.855459 | 7_4:-43261261 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAATCATTTTATATATAT+GGG | - | chr7_4:43262619-43262638 | None:intergenic | 10.0% |
| !! | ATTTAACTAAATTTCTTAAT+TGG | - | chr7_4:43262935-43262954 | None:intergenic | 10.0% |
| !! | AAGATTAATAATGAAATCAA+AGG | - | chr7_4:43260778-43260797 | None:intergenic | 15.0% |
| !! | AAAACTTAATAAAACAGAAA+TGG | - | chr7_4:43261726-43261745 | None:intergenic | 15.0% |
| !! | AAAAAAATGCAATAATTTCA+TGG | - | chr7_4:43262213-43262232 | None:intergenic | 15.0% |
| !! | ATAATCTAATTGTTAGTAAT+GGG | - | chr7_4:43262275-43262294 | None:intergenic | 15.0% |
| !!! | CTTCAATCATTTTATATATA+TGG | - | chr7_4:43262620-43262639 | None:intergenic | 15.0% |
| !!! | TTATTTTTACTAATCAAGAT+TGG | - | chr7_4:43262901-43262920 | None:intergenic | 15.0% |
| !! | AAATTAAACATATTAACGAA+AGG | + | chr7_4:43263051-43263070 | Msa1155350:intron | 15.0% |
| !! | AATTAAACATATTAACGAAA+GGG | + | chr7_4:43263052-43263071 | Msa1155350:intron | 15.0% |
| !!! | ATTAATAAACAATTTGAAAC+TGG | - | chr7_4:43263689-43263708 | None:intergenic | 15.0% |
| !!! | TTGTTTAATTTATTCCTAAA+AGG | + | chr7_4:43264227-43264246 | Msa1155350:three_prime_UTR | 15.0% |
| !! | AGTTATTACTTCATTTAAAT+GGG | - | chr7_4:43264450-43264469 | None:intergenic | 15.0% |
| !! | TAGTTATTACTTCATTTAAA+TGG | - | chr7_4:43264451-43264470 | None:intergenic | 15.0% |
| !!! | TTTCTTTTGTTTTCATAGAT+TGG | + | chr7_4:43260575-43260594 | Msa1155350:five_prime_UTR | 20.0% |
| !! | CATTAGATAATTAATGTATC+TGG | - | chr7_4:43260988-43261007 | None:intergenic | 20.0% |
| !! | GAATCAAATGTAATATTGTT+CGG | - | chr7_4:43261371-43261390 | None:intergenic | 20.0% |
| !! | TTTACAATATTTCCAGTTAA+TGG | - | chr7_4:43261516-43261535 | None:intergenic | 20.0% |
| !!! | ATAACATTTTTTTCCATGAT+GGG | - | chr7_4:43261599-43261618 | None:intergenic | 20.0% |
| !!! | AATAACATTTTTTTCCATGA+TGG | - | chr7_4:43261600-43261619 | None:intergenic | 20.0% |
| !!! | CATGGAAAAAAATGTTATTT+TGG | + | chr7_4:43261601-43261620 | Msa1155350:intron | 20.0% |
| !!! | AAAATGTTATTTTGGCAAAA+TGG | + | chr7_4:43261609-43261628 | Msa1155350:intron | 20.0% |
| !! | ACATATTACTATTCAAACAT+TGG | - | chr7_4:43261670-43261689 | None:intergenic | 20.0% |
| !! | TACTGAAATATTTAAACAAC+TGG | + | chr7_4:43262065-43262084 | Msa1155350:CDS | 20.0% |
| !! | ACTGAAATATTTAAACAACT+GGG | + | chr7_4:43262066-43262085 | Msa1155350:CDS | 20.0% |
| !! | TAATCTAATTGTTAGTAATG+GGG | - | chr7_4:43262274-43262293 | None:intergenic | 20.0% |
| !! | CATAATCTAATTGTTAGTAA+TGG | - | chr7_4:43262276-43262295 | None:intergenic | 20.0% |
| !!! | AATTTATCTAGTTGATACTA+TGG | + | chr7_4:43262438-43262457 | Msa1155350:intron | 20.0% |
| !!! | ATTTTATATATATGGGAGTT+GGG | - | chr7_4:43262612-43262631 | None:intergenic | 20.0% |
| !!! | TATCATTTTCCCAATAAAAT+AGG | - | chr7_4:43263342-43263361 | None:intergenic | 20.0% |
| !!! | ATTTTATTGGGAAAATGATA+TGG | + | chr7_4:43263342-43263361 | Msa1155350:CDS | 20.0% |
| !! | ATTTAACATACATCTATTCA+AGG | - | chr7_4:43264318-43264337 | None:intergenic | 20.0% |
| !! | GAATAGATGTATGTTAAATA+AGG | + | chr7_4:43264319-43264338 | Msa1155350:three_prime_UTR | 20.0% |
| !! | GTTATTACTTCATTTAAATG+GGG | - | chr7_4:43264449-43264468 | None:intergenic | 20.0% |
| ! | AATGACAGAATGATGTTTAA+AGG | + | chr7_4:43260852-43260871 | Msa1155350:intron | 25.0% |
| ! | ATGACAGAATGATGTTTAAA+GGG | + | chr7_4:43260853-43260872 | Msa1155350:intron | 25.0% |
| ! | TCTTTACTTATATATGAGAC+AGG | + | chr7_4:43261025-43261044 | Msa1155350:intron | 25.0% |
| !!! | GAGTAATTTTTTTTAGGACT+AGG | + | chr7_4:43261051-43261070 | Msa1155350:intron | 25.0% |
| !!! | TTTCAGCATAAAGTTTTATC+CGG | + | chr7_4:43261454-43261473 | Msa1155350:CDS | 25.0% |
| !!! | GAATTTTGAAAACTGGTAAA+TGG | - | chr7_4:43261702-43261721 | None:intergenic | 25.0% |
| !!! | AAATGGAGAATTTTGAAAAC+TGG | - | chr7_4:43261709-43261728 | None:intergenic | 25.0% |
| ! | AATGTCATTGAAAAACACTT+AGG | - | chr7_4:43261771-43261790 | None:intergenic | 25.0% |
| ! | AGCACTACTTATATAACAAA+AGG | - | chr7_4:43261800-43261819 | None:intergenic | 25.0% |
| ! | ACTAAATTCAAGCTAGTTAT+AGG | + | chr7_4:43261977-43261996 | Msa1155350:CDS | 25.0% |
| ! | CTTCACATATGCTAAATAAT+TGG | - | chr7_4:43262014-43262033 | None:intergenic | 25.0% |
| ! | ACCTGCAAAGTTAAATTAAA+TGG | + | chr7_4:43262236-43262255 | Msa1155350:intron | 25.0% |
| !! | ACCATTTAATTTAACTTTGC+AGG | - | chr7_4:43262240-43262259 | None:intergenic | 25.0% |
| !! | TTTTATATATATGGGAGTTG+GGG | - | chr7_4:43262611-43262630 | None:intergenic | 25.0% |
| !! | CATTTTATATATATGGGAGT+TGG | - | chr7_4:43262613-43262632 | None:intergenic | 25.0% |
| ! | CAAAAAACATTATGAAAGCT+CGG | - | chr7_4:43262720-43262739 | None:intergenic | 25.0% |
| !! | CTCATGTTATCTTTTAGATA+AGG | - | chr7_4:43262773-43262792 | None:intergenic | 25.0% |
| !!! | ATAACATGAGTTTTTTCTTG+AGG | + | chr7_4:43262783-43262802 | Msa1155350:intron | 25.0% |
| !! | TTTTACTAATCAAGATTGGA+GGG | - | chr7_4:43262897-43262916 | None:intergenic | 25.0% |
| !! | TTTTTACTAATCAAGATTGG+AGG | - | chr7_4:43262898-43262917 | None:intergenic | 25.0% |
| !! | TTTGATGATCATTAAGAAGT+TGG | - | chr7_4:43263391-43263410 | None:intergenic | 25.0% |
| ! | ACTTCTTAATGATCATCAAA+AGG | + | chr7_4:43263391-43263410 | Msa1155350:CDS | 25.0% |
| !!! | GTATTTTGTTTTTGTCTGAA+TGG | + | chr7_4:43263576-43263595 | Msa1155350:intron | 25.0% |
| ! | TGAAAAATTCATTTGAGCAA+TGG | - | chr7_4:43263786-43263805 | None:intergenic | 25.0% |
| ! | TTATTATACGTCCAACAATT+CGG | - | chr7_4:43263817-43263836 | None:intergenic | 25.0% |
| !! | GATAATAATTTTCTCTCAGA+TGG | - | chr7_4:43263973-43263992 | None:intergenic | 25.0% |
| ! | GAAATATCACGAAGAATATT+TGG | + | chr7_4:43264087-43264106 | Msa1155350:CDS | 25.0% |
| ! | TGAAATCAAAGGCGTAAAAT+GGG | - | chr7_4:43260767-43260786 | None:intergenic | 30.0% |
| ! | ATGAAATCAAAGGCGTAAAA+TGG | - | chr7_4:43260768-43260787 | None:intergenic | 30.0% |
| TACTTATATATGAGACAGGA+CGG | + | chr7_4:43261029-43261048 | Msa1155350:intron | 30.0% | |
| !!! | AGGACGGAGTAATTTTTTTT+AGG | + | chr7_4:43261045-43261064 | Msa1155350:intron | 30.0% |
| GATTCACTAAATAGATGGAT+CGG | + | chr7_4:43261186-43261205 | Msa1155350:exon | 30.0% | |
| GATCTTTCAAAGATAACCAA+GGG | - | chr7_4:43261334-43261353 | None:intergenic | 30.0% | |
| TGATCTTTCAAAGATAACCA+AGG | - | chr7_4:43261335-43261354 | None:intergenic | 30.0% | |
| !! | TTCAGCATAAAGTTTTATCC+GGG | + | chr7_4:43261455-43261474 | Msa1155350:CDS | 30.0% |
| TTTGTACATTTGCCATTAAC+TGG | + | chr7_4:43261501-43261520 | Msa1155350:intron | 30.0% | |
| !! | AAATGGTTTGCTAATGAATG+AGG | + | chr7_4:43261626-43261645 | Msa1155350:intron | 30.0% |
| !! | TGCAGTTTTCTAGAGATAAA+AGG | + | chr7_4:43261840-43261859 | Msa1155350:intron | 30.0% |
| ATTTCAGTAAAAATGCTTGC+AGG | - | chr7_4:43262054-43262073 | None:intergenic | 30.0% | |
| TATTTAAACAACTGGGTTGT+TGG | + | chr7_4:43262073-43262092 | Msa1155350:CDS | 30.0% | |
| TGTTGGTATATATTGTCACA+AGG | + | chr7_4:43262090-43262109 | Msa1155350:CDS | 30.0% | |
| !! | GTTGATGATATTGAATCAAC+TGG | + | chr7_4:43262297-43262316 | Msa1155350:intron | 30.0% |
| ! | GTTGATAAACATTAGCACAA+TGG | + | chr7_4:43262319-43262338 | Msa1155350:intron | 30.0% |
| TCCAGTAGTGTATGAAAAAT+GGG | - | chr7_4:43262377-43262396 | None:intergenic | 30.0% | |
| ATCCAGTAGTGTATGAAAAA+TGG | - | chr7_4:43262378-43262397 | None:intergenic | 30.0% | |
| ! | CTGGATAACTTTTTAGACTT+TGG | + | chr7_4:43262392-43262411 | Msa1155350:intron | 30.0% |
| TGTATGAAATACATAGTCGT+TGG | - | chr7_4:43262567-43262586 | None:intergenic | 30.0% | |
| ACGACTATGTATTTCATACA+AGG | + | chr7_4:43262567-43262586 | Msa1155350:intron | 30.0% | |
| TTTATATATATGGGAGTTGG+GGG | - | chr7_4:43262610-43262629 | None:intergenic | 30.0% | |
| TATAAAATGATTGAAGAGCG+TGG | + | chr7_4:43262624-43262643 | Msa1155350:intron | 30.0% | |
| TTACAATTCATGCTACTACT+TGG | + | chr7_4:43262660-43262679 | Msa1155350:intron | 30.0% | |
| !!! | CGAGCTTTCATAATGTTTTT+TGG | + | chr7_4:43262718-43262737 | Msa1155350:intron | 30.0% |
| TTTCTTAATTGGTGTGAAGT+TGG | - | chr7_4:43262924-43262943 | None:intergenic | 30.0% | |
| ! | AACTTGTTCCATGAGAATAA+AGG | + | chr7_4:43263018-43263037 | Msa1155350:intron | 30.0% |
| AATCCAAAATTCCTTGAGAT+TGG | + | chr7_4:43263263-43263282 | Msa1155350:CDS | 30.0% | |
| !!! | TTTTTTTCTTGCCAATCTCA+AGG | - | chr7_4:43263277-43263296 | None:intergenic | 30.0% |
| TTGAGATTGGCAAGAAAAAA+AGG | + | chr7_4:43263276-43263295 | Msa1155350:CDS | 30.0% | |
| TGAGATTGGCAAGAAAAAAA+GGG | + | chr7_4:43263277-43263296 | Msa1155350:CDS | 30.0% | |
| TATTATACGTCCAACAATTC+GGG | - | chr7_4:43263816-43263835 | None:intergenic | 30.0% | |
| ! | ATTTGTTGCACTAACACTTA+AGG | + | chr7_4:43263846-43263865 | Msa1155350:CDS | 30.0% |
| ! | TTTGTACATCATTTAGCTTC+TGG | + | chr7_4:43264060-43264079 | Msa1155350:CDS | 30.0% |
| ! | TTGTACATCATTTAGCTTCT+GGG | + | chr7_4:43264061-43264080 | Msa1155350:CDS | 30.0% |
| !! | ATTTTTCAAACCTTATGTCC+CGG | - | chr7_4:43264178-43264197 | None:intergenic | 30.0% |
| TGTTTAGCATCAGTAAATGT+TGG | + | chr7_4:43264348-43264367 | Msa1155350:three_prime_UTR | 30.0% | |
| TTACTTCATTTAAATGGGGT+TGG | - | chr7_4:43264445-43264464 | None:intergenic | 30.0% | |
| ATTATCAAACCAGAGATCCT+CGG | + | chr7_4:43260605-43260624 | Msa1155350:five_prime_UTR | 35.0% | |
| AAGAAAAGAAGAGGAAAGAG+TGG | - | chr7_4:43260720-43260739 | None:intergenic | 35.0% | |
| ! | CTTTCCTCTTCTTTTCTTCA+AGG | + | chr7_4:43260722-43260741 | Msa1155350:five_prime_UTR | 35.0% |
| TGTACCTTGAAGAAAAGAAG+AGG | - | chr7_4:43260729-43260748 | None:intergenic | 35.0% | |
| !!! | CTTCTCAAACTGTTTTTAGC+TGG | + | chr7_4:43261162-43261181 | Msa1155350:five_prime_UTR | 35.0% |
| CTGGTGATTCACTAAATAGA+TGG | + | chr7_4:43261181-43261200 | Msa1155350:exon | 35.0% | |
| AGGAGAAATATATTCGCCAA+TGG | + | chr7_4:43261402-43261421 | Msa1155350:CDS | 35.0% | |
| !! | CATAAAGTTTTATCCGGGAA+AGG | + | chr7_4:43261460-43261479 | Msa1155350:CDS | 35.0% |
| AGAGAAGTTAAAACCTTTCC+CGG | - | chr7_4:43261476-43261495 | None:intergenic | 35.0% | |
| TTCATGTGTGCATATTTCAG+TGG | - | chr7_4:43261552-43261571 | None:intergenic | 35.0% | |
| ! | TGATGGGCAAACTTAAACTT+TGG | - | chr7_4:43261583-43261602 | None:intergenic | 35.0% |
| ! | AAGTTTAAGTTTGCCCATCA+TGG | + | chr7_4:43261583-43261602 | Msa1155350:intron | 35.0% |
| AGCAATATCTGCATCTTTGT+CGG | - | chr7_4:43261903-43261922 | None:intergenic | 35.0% | |
| TATGTGAAGAGAGAGAAGAA+TGG | + | chr7_4:43262025-43262044 | Msa1155350:CDS | 35.0% | |
| TATGTATCCAGTGTTTACCT+TGG | + | chr7_4:43262144-43262163 | Msa1155350:intron | 35.0% | |
| AAAGACAGTATAGTATGCCA+AGG | - | chr7_4:43262164-43262183 | None:intergenic | 35.0% | |
| !! | ACCCATTTTTCATACACTAC+TGG | + | chr7_4:43262373-43262392 | Msa1155350:intron | 35.0% |
| ATGCTACTACTTGGTTCATT+TGG | + | chr7_4:43262669-43262688 | Msa1155350:intron | 35.0% | |
| TACTACTTGGTTCATTTGGT+TGG | + | chr7_4:43262673-43262692 | Msa1155350:intron | 35.0% | |
| !! | TTTTGGTGTATTCATCTGTG+TGG | + | chr7_4:43262735-43262754 | Msa1155350:intron | 35.0% |
| ! | TTTGGTGTATTCATCTGTGT+GGG | + | chr7_4:43262736-43262755 | Msa1155350:intron | 35.0% |
| !!! | ACATGAGTTTTTTCTTGAGG+TGG | + | chr7_4:43262786-43262805 | Msa1155350:intron | 35.0% |
| !!! | CATGAGTTTTTTCTTGAGGT+GGG | + | chr7_4:43262787-43262806 | Msa1155350:intron | 35.0% |
| ATTCATAAATATCACCGCAG+TGG | + | chr7_4:43262831-43262850 | Msa1155350:intron | 35.0% | |
| TTCATAAATATCACCGCAGT+GGG | + | chr7_4:43262832-43262851 | Msa1155350:intron | 35.0% | |
| CAATGACTCCTTTATTCTCA+TGG | - | chr7_4:43263029-43263048 | None:intergenic | 35.0% | |
| CATGAGAATAAAGGAGTCAT+TGG | + | chr7_4:43263027-43263046 | Msa1155350:intron | 35.0% | |
| ! | TTGCCAATCTCAAGGAATTT+TGG | - | chr7_4:43263269-43263288 | None:intergenic | 35.0% |
| AAAAGGGAGCAACAACAAAA+TGG | + | chr7_4:43263293-43263312 | Msa1155350:CDS | 35.0% | |
| AAAATAGGCACCTTTGGTAA+AGG | - | chr7_4:43263327-43263346 | None:intergenic | 35.0% | |
| !!! | ACCAAAGGTGCCTATTTTAT+TGG | + | chr7_4:43263329-43263348 | Msa1155350:CDS | 35.0% |
| !!! | CCAAAGGTGCCTATTTTATT+GGG | + | chr7_4:43263330-43263349 | Msa1155350:CDS | 35.0% |
| GCTCTTGAGCTTGATTTATT+TGG | + | chr7_4:43263422-43263441 | Msa1155350:CDS | 35.0% | |
| GAGCTTGATTTATTTGGAAG+TGG | + | chr7_4:43263428-43263447 | Msa1155350:CDS | 35.0% | |
| TGATTTATTTGGAAGTGGAG+AGG | + | chr7_4:43263433-43263452 | Msa1155350:CDS | 35.0% | |
| ATAGATCATCAGCATGATCA+CGG | - | chr7_4:43263520-43263539 | None:intergenic | 35.0% | |
| GTTTATTAATCCGAGCACAA+CGG | + | chr7_4:43263699-43263718 | Msa1155350:CDS | 35.0% | |
| TTGGACGTATAATAACCACA+AGG | + | chr7_4:43263822-43263841 | Msa1155350:CDS | 35.0% | |
| TTAGTGCAACAAATTCCTTG+TGG | - | chr7_4:43263840-43263859 | None:intergenic | 35.0% | |
| ATATTTGCAACAGACAGTAG+AGG | + | chr7_4:43264026-43264045 | Msa1155350:CDS | 35.0% | |
| TATTCCTAAAAGGTTGAGAG+TGG | + | chr7_4:43264237-43264256 | Msa1155350:three_prime_UTR | 35.0% | |
| GAGTAAAACGAAGGAAGATG+AGG | - | chr7_4:43260691-43260710 | None:intergenic | 40.0% | |
| TGGTGAAGAGAGTAAAACGA+AGG | - | chr7_4:43260700-43260719 | None:intergenic | 40.0% | |
| CTAAATAGATGGATCGGAAG+CGG | + | chr7_4:43261192-43261211 | Msa1155350:exon | 40.0% | |
| CGGCGTATCTTTACAAAACT+GGG | + | chr7_4:43261285-43261304 | Msa1155350:CDS | 40.0% | |
| AGATAACCAAGGGATCACTA+AGG | - | chr7_4:43261324-43261343 | None:intergenic | 40.0% | |
| ATATATTTCTCCTGCTCAGC+AGG | - | chr7_4:43261395-43261414 | None:intergenic | 40.0% | |
| ATATATTCGCCAATGGCTTG+AGG | + | chr7_4:43261409-43261428 | Msa1155350:CDS | 40.0% | |
| GATAGAGTTGGATTTGCATC+TGG | + | chr7_4:43261431-43261450 | Msa1155350:CDS | 40.0% | |
| !! | AAAAGGAGCATTCTTGCTGT+TGG | + | chr7_4:43261857-43261876 | Msa1155350:CDS | 40.0% |
| CAATATCTGCATCTTTGTCG+GGG | - | chr7_4:43261901-43261920 | None:intergenic | 40.0% | |
| GCAATATCTGCATCTTTGTC+GGG | - | chr7_4:43261902-43261921 | None:intergenic | 40.0% | |
| GGTTTCATCATGGGAAAAGA+TGG | + | chr7_4:43261951-43261970 | Msa1155350:CDS | 40.0% | |
| TAGTATGCCAAGGTAAACAC+TGG | - | chr7_4:43262154-43262173 | None:intergenic | 40.0% | |
| ! | GAAAGCTCGGTGATGATATA+AGG | - | chr7_4:43262707-43262726 | None:intergenic | 40.0% |
| !! | TTCTCAAAAGTGTCCTTCAC+AGG | + | chr7_4:43262995-43263014 | Msa1155350:intron | 40.0% |
| !! | TATTAACGAAAGGGCGTTCT+AGG | + | chr7_4:43263061-43263080 | Msa1155350:intron | 40.0% |
| TTGCAACAAGTTCGTGAAAG+CGG | - | chr7_4:43263128-43263147 | None:intergenic | 40.0% | |
| ! | CTGATTAGCTGTATGATTGC+AGG | + | chr7_4:43263175-43263194 | Msa1155350:intron | 40.0% |
| CCCAATAAAATAGGCACCTT+TGG | - | chr7_4:43263333-43263352 | None:intergenic | 40.0% | |
| GGGAAAATGATATGGAGCAA+AGG | + | chr7_4:43263350-43263369 | Msa1155350:CDS | 40.0% | |
| TCAAGAAGCTGCTAAAAAGC+TGG | + | chr7_4:43263469-43263488 | Msa1155350:CDS | 40.0% | |
| TAGATCATCAGCATGATCAC+GGG | - | chr7_4:43263519-43263538 | None:intergenic | 40.0% | |
| TCTCTTCGACAATGTACTGA+TGG | + | chr7_4:43263620-43263639 | Msa1155350:intron | 40.0% | |
| ! | CTCTTCGACAATGTACTGAT+GGG | + | chr7_4:43263621-43263640 | Msa1155350:intron | 40.0% |
| ! | AACAGCAGAAGCTTTAGCAA+TGG | + | chr7_4:43263738-43263757 | Msa1155350:CDS | 40.0% |
| ! | ACAGCAGAAGCTTTAGCAAT+GGG | + | chr7_4:43263739-43263758 | Msa1155350:CDS | 40.0% |
| TCAGAGACATGACCTTTCAT+GGG | + | chr7_4:43263903-43263922 | Msa1155350:CDS | 40.0% | |
| !! | CTTGGGTTTGCTAATACTTC+CGG | + | chr7_4:43264156-43264175 | Msa1155350:CDS | 40.0% |
| !! | TTGGGTTTGCTAATACTTCC+GGG | + | chr7_4:43264157-43264176 | Msa1155350:CDS | 40.0% |
| ! | CAAACCACTCTCAACCTTTT+AGG | - | chr7_4:43264244-43264263 | None:intergenic | 40.0% |
| ! | CAAATGCTCTCTTTCTAGTC+AGG | + | chr7_4:43264270-43264289 | Msa1155350:three_prime_UTR | 40.0% |
| AACGAAGGAAGATGAGGAGA+AGG | - | chr7_4:43260685-43260704 | None:intergenic | 45.0% | |
| !! | TTACTACTGCTAGCCTTCCA+TGG | + | chr7_4:43261228-43261247 | Msa1155350:CDS | 45.0% |
| ACGAAAGAGAGGATTCACTG+CGG | - | chr7_4:43261264-43261283 | None:intergenic | 45.0% | |
| AGTGAATCCTCTCTTTCGTG+CGG | + | chr7_4:43261265-43261284 | Msa1155350:CDS | 45.0% | |
| GCGGCGTATCTTTACAAAAC+TGG | + | chr7_4:43261284-43261303 | Msa1155350:CDS | 45.0% | |
| ATGTCACCTTAGTGATCCCT+TGG | + | chr7_4:43261315-43261334 | Msa1155350:CDS | 45.0% | |
| ATTTGATTCTCCTGCTGAGC+AGG | + | chr7_4:43261382-43261401 | Msa1155350:CDS | 45.0% | |
| CAACTCTATCCTCAAGCCAT+TGG | - | chr7_4:43261421-43261440 | None:intergenic | 45.0% | |
| CAATGGCTTGAGGATAGAGT+TGG | + | chr7_4:43261419-43261438 | Msa1155350:CDS | 45.0% | |
| ACCTGACGTGGTTTCATCAT+GGG | + | chr7_4:43261942-43261961 | Msa1155350:CDS | 45.0% | |
| ATGGTGTGATATTGACCTGC+AGG | + | chr7_4:43262338-43262357 | Msa1155350:intron | 45.0% | |
| TGTGATATTGACCTGCAGGA+AGG | + | chr7_4:43262342-43262361 | Msa1155350:intron | 45.0% | |
| CAAAGCTTCATTTCCCACTG+CGG | - | chr7_4:43262848-43262867 | None:intergenic | 45.0% | |
| CATGGAACAAGTTCCTGTGA+AGG | - | chr7_4:43263011-43263030 | None:intergenic | 45.0% | |
| TCCATCGTCTGTAACGTTCA+CGG | + | chr7_4:43263236-43263255 | Msa1155350:CDS | 45.0% | |
| GGAGAGAATGCCTTTACCAA+AGG | + | chr7_4:43263314-43263333 | Msa1155350:CDS | 45.0% | |
| GATATGGAGCAAAGGCTACA+AGG | + | chr7_4:43263358-43263377 | Msa1155350:CDS | 45.0% | |
| GGGAAAAATTGTTGTGTGCG+CGG | + | chr7_4:43263759-43263778 | Msa1155350:CDS | 45.0% | |
| TCAAGCAGTTCCCGAATTGT+TGG | + | chr7_4:43263803-43263822 | Msa1155350:CDS | 45.0% | |
| CTCAGAGACATGACCTTTCA+TGG | + | chr7_4:43263902-43263921 | Msa1155350:CDS | 45.0% | |
| TGCCACAGAACGGTTTCTTA+AGG | + | chr7_4:43263930-43263949 | Msa1155350:CDS | 45.0% | |
| AGGTTGCAAGCTATGTGGAA+TGG | - | chr7_4:43264115-43264134 | None:intergenic | 45.0% | |
| ! | TCATCAGGTTGCAAGCTATG+TGG | - | chr7_4:43264120-43264139 | None:intergenic | 45.0% |
| GCTAATACTTCCGGGACATA+AGG | + | chr7_4:43264165-43264184 | Msa1155350:CDS | 45.0% | |
| ! | GCTCTCTTTCTAGTCAGGAT+AGG | + | chr7_4:43264275-43264294 | Msa1155350:three_prime_UTR | 45.0% |
| ! | TTCACCTGAGTTGAGATGAC+TGG | + | chr7_4:43264384-43264403 | Msa1155350:three_prime_UTR | 45.0% |
| TACACCAGTCATCTCAACTC+AGG | - | chr7_4:43264391-43264410 | None:intergenic | 45.0% | |
| TTTCGTGTACGCAAGTTCCG+AGG | - | chr7_4:43260625-43260644 | None:intergenic | 50.0% | |
| CACCTGACGTGGTTTCATCA+TGG | + | chr7_4:43261941-43261960 | Msa1155350:CDS | 50.0% | |
| TCCCATGATGAAACCACGTC+AGG | - | chr7_4:43261946-43261965 | None:intergenic | 50.0% | |
| CGTTACAGACGATGGATCCA+GGG | - | chr7_4:43263232-43263251 | None:intergenic | 50.0% | |
| ACGTTACAGACGATGGATCC+AGG | - | chr7_4:43263233-43263252 | None:intergenic | 50.0% | |
| TCCGTGAACGTTACAGACGA+TGG | - | chr7_4:43263240-43263259 | None:intergenic | 50.0% | |
| TAATCCGAGCACAACGGATG+TGG | + | chr7_4:43263705-43263724 | Msa1155350:CDS | 50.0% | |
| CAAACCACATCCGTTGTGCT+CGG | - | chr7_4:43263712-43263731 | None:intergenic | 50.0% | |
| !! | AAGGCATTGACCGAAGAACC+TGG | + | chr7_4:43263865-43263884 | Msa1155350:CDS | 50.0% |
| ! | TGTAGGTTGGCCAGGTTCTT+CGG | - | chr7_4:43263878-43263897 | None:intergenic | 50.0% |
| TCATGTCTCTGAGCGTCTGT+AGG | - | chr7_4:43263895-43263914 | None:intergenic | 50.0% | |
| GAGACATGACCTTTCATGGG+AGG | + | chr7_4:43263906-43263925 | Msa1155350:CDS | 50.0% | |
| GGCCTTAAGAAACCGTTCTG+TGG | - | chr7_4:43263935-43263954 | None:intergenic | 50.0% | |
| ! | AGATGGCTTGTCGAGGTCAA+CGG | - | chr7_4:43263956-43263975 | None:intergenic | 50.0% |
| ! | TTCTCTCAGATGGCTTGTCG+AGG | - | chr7_4:43263963-43263982 | None:intergenic | 50.0% |
| AACAGCTGCGCAAGGAACTT+GGG | + | chr7_4:43264139-43264158 | Msa1155350:CDS | 50.0% | |
| ACGCAAGTTCCGAGGATCTC+TGG | - | chr7_4:43260617-43260636 | None:intergenic | 55.0% | |
| !! | GCTAGCCTTCCATGGTTGAC+CGG | + | chr7_4:43261236-43261255 | Msa1155350:CDS | 55.0% |
| GAGAGGATTCACTGCGGTTC+CGG | - | chr7_4:43261258-43261277 | None:intergenic | 55.0% | |
| AGATACGCCGCACGAAAGAG+AGG | - | chr7_4:43261275-43261294 | None:intergenic | 55.0% | |
| TGAAACCACGTCAGGTGCTC+AGG | - | chr7_4:43261938-43261957 | None:intergenic | 55.0% | |
| GGTGAGTAGATCCTTCCTGC+AGG | - | chr7_4:43262356-43262375 | None:intergenic | 55.0% | |
| GACAGAGCAAGCGCAAGCAA+TGG | - | chr7_4:43263151-43263170 | None:intergenic | 55.0% | |
| GGATCCAGGGTAATCCTGAG+TGG | - | chr7_4:43263219-43263238 | None:intergenic | 55.0% | |
| TCATCAGCATGATCACGGGC+TGG | - | chr7_4:43263515-43263534 | None:intergenic | 55.0% | |
| GTCTCTGAGCGTCTGTAGGT+TGG | - | chr7_4:43263891-43263910 | None:intergenic | 55.0% | |
| ACCTGATGAACAGCTGCGCA+AGG | + | chr7_4:43264131-43264150 | Msa1155350:CDS | 55.0% | |
| TCCTTGCGCAGCTGTTCATC+AGG | - | chr7_4:43264135-43264154 | None:intergenic | 55.0% | |
| GAACAGCTGCGCAAGGAACT+TGG | + | chr7_4:43264138-43264157 | Msa1155350:CDS | 55.0% | |
| CGGTTCCGGTCAACCATGGA+AGG | - | chr7_4:43261244-43261263 | None:intergenic | 60.0% | |
| ACTGCGGTTCCGGTCAACCA+TGG | - | chr7_4:43261248-43261267 | None:intergenic | 60.0% | |
| AAGAGCCTGAGCACCTGACG+TGG | + | chr7_4:43261930-43261949 | Msa1155350:CDS | 60.0% | |
| CAGACTCTCTGCTGCCACTC+AGG | + | chr7_4:43263202-43263221 | Msa1155350:CDS | 60.0% | |
| GCTGCCACTCAGGATTACCC+TGG | + | chr7_4:43263212-43263231 | Msa1155350:CDS | 60.0% | |
| ! | TGAGCGTCTGTAGGTTGGCC+AGG | - | chr7_4:43263886-43263905 | None:intergenic | 60.0% |
| CTGTGGCAGCCTCCCATGAA+AGG | - | chr7_4:43263918-43263937 | None:intergenic | 60.0% | |
| CATGGGAGGCTGCCACAGAA+CGG | + | chr7_4:43263920-43263939 | Msa1155350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 43260557 | 43264478 | 43260557 | ID=Msa1155350;Name=Msa1155350 |
| chr7_4 | mRNA | 43260557 | 43264478 | 43260557 | ID=Msa1155350-mRNA-1;Parent=Msa1155350;Name=Msa1155350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=247|1|1|1|0.75|0.6|5|293|464 |
| chr7_4 | exon | 43260557 | 43260743 | 43260557 | ID=Msa1155350-mRNA-1:exon:10814;Parent=Msa1155350-mRNA-1 |
| chr7_4 | exon | 43261140 | 43261481 | 43261140 | ID=Msa1155350-mRNA-1:exon:10815;Parent=Msa1155350-mRNA-1 |
| chr7_4 | exon | 43261845 | 43262111 | 43261845 | ID=Msa1155350-mRNA-1:exon:10816;Parent=Msa1155350-mRNA-1 |
| chr7_4 | exon | 43263197 | 43263546 | 43263197 | ID=Msa1155350-mRNA-1:exon:10817;Parent=Msa1155350-mRNA-1 |
| chr7_4 | exon | 43263690 | 43264478 | 43263690 | ID=Msa1155350-mRNA-1:exon:10818;Parent=Msa1155350-mRNA-1 |
| chr7_4 | five_prime_UTR | 43260557 | 43260743 | 43260557 | ID=Msa1155350-mRNA-1:five_prime_utr;Parent=Msa1155350-mRNA-1 |
| chr7_4 | five_prime_UTR | 43261140 | 43261199 | 43261140 | ID=Msa1155350-mRNA-1:five_prime_utr;Parent=Msa1155350-mRNA-1 |
| chr7_4 | CDS | 43261200 | 43261481 | 43261200 | ID=Msa1155350-mRNA-1:cds;Parent=Msa1155350-mRNA-1 |
| chr7_4 | CDS | 43261845 | 43262111 | 43261845 | ID=Msa1155350-mRNA-1:cds;Parent=Msa1155350-mRNA-1 |
| chr7_4 | CDS | 43263197 | 43263546 | 43263197 | ID=Msa1155350-mRNA-1:cds;Parent=Msa1155350-mRNA-1 |
| chr7_4 | CDS | 43263690 | 43264185 | 43263690 | ID=Msa1155350-mRNA-1:cds;Parent=Msa1155350-mRNA-1 |
| chr7_4 | three_prime_UTR | 43264186 | 43264478 | 43264186 | ID=Msa1155350-mRNA-1:three_prime_utr;Parent=Msa1155350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
