Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276510 | sp|Q9LVJ3|RSH2C_ARATH | 67.121 | 733 | 198 | 9 | 1 | 721 | 2 | 703 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276510 | Q4VYD1 | 97.135 | 733 | 13 | 5 | 1 | 732 | 1 | 726 | 0.0 | 1461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000590 | Msa1276510 | 0.825793 | 3.861447e-54 | -8.615850e-47 |
| Msa0018210 | Msa1276510 | 0.848334 | 6.550189e-60 | -8.615850e-47 |
| Msa0026870 | Msa1276510 | 0.838179 | 3.354122e-57 | -8.615850e-47 |
| Msa0029850 | Msa1276510 | 0.824935 | 6.162109e-54 | -8.615850e-47 |
| Msa0038020 | Msa1276510 | 0.842176 | 3.033624e-58 | -8.615850e-47 |
| Msa0042980 | Msa1276510 | -0.811127 | 8.178654e-51 | -8.615850e-47 |
| Msa0043730 | Msa1276510 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0052030 | Msa1276510 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0077180 | Msa1276510 | 0.828441 | 8.977313e-55 | -8.615850e-47 |
| Msa0082170 | Msa1276510 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0084430 | Msa1276510 | 0.811016 | 8.643722e-51 | -8.615850e-47 |
| Msa0085720 | Msa1276510 | 0.880767 | 4.185208e-70 | -8.615850e-47 |
| Msa0093520 | Msa1276510 | 0.820413 | 6.951038e-53 | -8.615850e-47 |
| Msa0102120 | Msa1276510 | 0.823837 | 1.117326e-53 | -8.615850e-47 |
| Msa0608710 | Msa1276510 | 0.818315 | 2.090534e-52 | -8.615850e-47 |
| Msa0612680 | Msa1276510 | -0.810452 | 1.144811e-50 | -8.615850e-47 |
| Msa0615340 | Msa1276510 | 0.847698 | 9.808825e-60 | -8.615850e-47 |
| Msa0617450 | Msa1276510 | 0.821531 | 3.842385e-53 | -8.615850e-47 |
| Msa0621750 | Msa1276510 | -0.818448 | 1.949914e-52 | -8.615850e-47 |
| Msa0622600 | Msa1276510 | 0.823496 | 1.342567e-53 | -8.615850e-47 |
| Msa0624230 | Msa1276510 | 0.833249 | 5.942774e-56 | -8.615850e-47 |
| Msa0625840 | Msa1276510 | -0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0626990 | Msa1276510 | 0.856809 | 2.502015e-62 | -8.615850e-47 |
| Msa0627350 | Msa1276510 | 0.854734 | 1.010584e-61 | -8.615850e-47 |
| Msa0628740 | Msa1276510 | 0.818777 | 1.641978e-52 | -8.615850e-47 |
| Msa0653320 | Msa1276510 | -0.827608 | 1.424149e-54 | -8.615850e-47 |
| Msa0666140 | Msa1276510 | 0.812867 | 3.414861e-51 | -8.615850e-47 |
| Msa0679550 | Msa1276510 | 0.863039 | 3.308727e-64 | -8.615850e-47 |
| Msa0693790 | Msa1276510 | 0.806833 | 6.787696e-50 | -8.615850e-47 |
| Msa0700230 | Msa1276510 | 0.842431 | 2.597539e-58 | -8.615850e-47 |
| Msa0704730 | Msa1276510 | 0.813435 | 2.563290e-51 | -8.615850e-47 |
| Msa0724950 | Msa1276510 | 0.800646 | 1.307408e-48 | -8.615850e-47 |
| Msa0731180 | Msa1276510 | 0.822945 | 1.805044e-53 | -8.615850e-47 |
| Msa0751210 | Msa1276510 | 0.841024 | 6.106240e-58 | -8.615850e-47 |
| Msa0760350 | Msa1276510 | 0.803194 | 3.915869e-49 | -8.615850e-47 |
| Msa0793240 | Msa1276510 | 0.800752 | 1.243373e-48 | -8.615850e-47 |
| Msa0801730 | Msa1276510 | 0.810687 | 1.018422e-50 | -8.615850e-47 |
| Msa0801740 | Msa1276510 | 0.828918 | 6.882548e-55 | -8.615850e-47 |
| Msa0803590 | Msa1276510 | 0.815354 | 9.649283e-52 | -8.615850e-47 |
| Msa0805420 | Msa1276510 | 0.811698 | 6.147181e-51 | -8.615850e-47 |
| Msa0807030 | Msa1276510 | 0.805899 | 1.068265e-49 | -8.615850e-47 |
| Msa0818110 | Msa1276510 | 0.804433 | 2.165233e-49 | -8.615850e-47 |
| Msa0831150 | Msa1276510 | 0.804496 | 2.101094e-49 | -8.615850e-47 |
| Msa0831590 | Msa1276510 | 0.830102 | 3.548059e-55 | -8.615850e-47 |
| Msa0124550 | Msa1276510 | 0.862432 | 5.089188e-64 | -8.615850e-47 |
| Msa0125050 | Msa1276510 | 0.814250 | 1.695281e-51 | -8.615850e-47 |
| Msa0126950 | Msa1276510 | 0.808879 | 2.493488e-50 | -8.615850e-47 |
| Msa0130520 | Msa1276510 | 0.848290 | 6.736593e-60 | -8.615850e-47 |
| Msa0137570 | Msa1276510 | 0.808092 | 3.671167e-50 | -8.615850e-47 |
| Msa0137710 | Msa1276510 | -0.827050 | 1.937619e-54 | -8.615850e-47 |
| Msa0140510 | Msa1276510 | -0.809746 | 1.624432e-50 | -8.615850e-47 |
| Msa0169820 | Msa1276510 | 0.830815 | 2.374919e-55 | -8.615850e-47 |
| Msa0174850 | Msa1276510 | 0.828884 | 7.014261e-55 | -8.615850e-47 |
| Msa0175050 | Msa1276510 | 0.876429 | 1.406734e-68 | -8.615850e-47 |
| Msa0182570 | Msa1276510 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0183010 | Msa1276510 | -0.807648 | 4.561190e-50 | -8.615850e-47 |
| Msa0187060 | Msa1276510 | 0.850565 | 1.563706e-60 | -8.615850e-47 |
| Msa0187220 | Msa1276510 | 0.811582 | 6.514776e-51 | -8.615850e-47 |
| Msa0189030 | Msa1276510 | 0.804892 | 1.736316e-49 | -8.615850e-47 |
| Msa0199800 | Msa1276510 | -0.809545 | 1.794751e-50 | -8.615850e-47 |
| Msa1229610 | Msa1276510 | 0.837588 | 4.757469e-57 | -8.615850e-47 |
| Msa1230830 | Msa1276510 | 0.907725 | 3.716033e-81 | -8.615850e-47 |
| Msa1235400 | Msa1276510 | 0.928638 | 2.175495e-92 | -8.615850e-47 |
| Msa1241800 | Msa1276510 | 0.841071 | 5.935519e-58 | -8.615850e-47 |
| Msa1244200 | Msa1276510 | 0.809516 | 1.820643e-50 | -8.615850e-47 |
| Msa1244930 | Msa1276510 | 0.818553 | 1.846171e-52 | -8.615850e-47 |
| Msa1258380 | Msa1276510 | -0.812393 | 4.337549e-51 | -8.615850e-47 |
| Msa1259530 | Msa1276510 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa1270660 | Msa1276510 | 0.827544 | 1.475562e-54 | -8.615850e-47 |
| Msa1270730 | Msa1276510 | 0.828901 | 6.946865e-55 | -8.615850e-47 |
| Msa1272320 | Msa1276510 | 0.839145 | 1.888034e-57 | -8.615850e-47 |
| Msa1276510 | Msa1285260 | 0.806504 | 7.967951e-50 | -8.615850e-47 |
| Msa1276510 | Msa1287680 | 0.801439 | 8.998081e-49 | -8.615850e-47 |
| Msa1276510 | Msa1295330 | 0.814716 | 1.336939e-51 | -8.615850e-47 |
| Msa1276510 | Msa1305350 | 0.811977 | 5.344615e-51 | -8.615850e-47 |
| Msa1276510 | Msa1306750 | 0.815944 | 7.129950e-52 | -8.615850e-47 |
| Msa1276510 | Msa1307740 | 0.864250 | 1.392031e-64 | -8.615850e-47 |
| Msa1276510 | Msa1310220 | 0.825850 | 3.743676e-54 | -8.615850e-47 |
| Msa1276510 | Msa1314770 | 0.953495 | 2.420886e-111 | -8.615850e-47 |
| Msa1276510 | Msa1322200 | 0.832317 | 1.013084e-55 | -8.615850e-47 |
| Msa1276510 | Msa1325430 | 0.802987 | 4.320847e-49 | -8.615850e-47 |
| Msa1276510 | Msa1335230 | 0.814289 | 1.662382e-51 | -8.615850e-47 |
| Msa1276510 | Msa1335710 | 0.807775 | 4.286008e-50 | -8.615850e-47 |
| Msa1276510 | Msa1348600 | 0.815932 | 7.176242e-52 | -8.615850e-47 |
| Msa1276510 | Msa1350690 | 0.809219 | 2.108192e-50 | -8.615850e-47 |
| Msa1276510 | Msa1360240 | 0.813012 | 3.174246e-51 | -8.615850e-47 |
| Msa1276510 | Msa1364370 | 0.822027 | 2.950400e-53 | -8.615850e-47 |
| Msa1276510 | Msa1372290 | 0.810189 | 1.304742e-50 | -8.615850e-47 |
| Msa1276510 | Msa1373350 | 0.855033 | 8.276421e-62 | -8.615850e-47 |
| Msa1276510 | Msa1376130 | 0.805112 | 1.562431e-49 | -8.615850e-47 |
| Msa1276510 | Msa1376160 | -0.810942 | 8.970064e-51 | -8.615850e-47 |
| Msa1276510 | Msa1378230 | 0.901250 | 3.240531e-78 | -8.615850e-47 |
| Msa1276510 | Msa1395440 | 0.821085 | 4.869091e-53 | -8.615850e-47 |
| Msa1276510 | Msa1403340 | 0.807190 | 5.705695e-50 | -8.615850e-47 |
| Msa1276510 | Msa1404240 | -0.840557 | 8.095977e-58 | -8.615850e-47 |
| Msa1276510 | Msa1406110 | -0.801783 | 7.650753e-49 | -8.615850e-47 |
| Msa1276510 | Msa1407650 | 0.835669 | 1.467109e-56 | -8.615850e-47 |
| Msa1276510 | Msa1417810 | -0.807953 | 3.929082e-50 | -8.615850e-47 |
| Msa1276510 | Msa1423820 | 0.806720 | 7.171634e-50 | -8.615850e-47 |
| Msa1276510 | Msa1434240 | 0.820346 | 7.200435e-53 | -8.615850e-47 |
| Msa1276510 | Msa1437130 | 0.827970 | 1.165815e-54 | -8.615850e-47 |
| Msa1276510 | Msa1444250 | -0.822414 | 2.399340e-53 | -8.615850e-47 |
| Msa1276510 | Msa1444740 | 0.821560 | 3.783631e-53 | -8.615850e-47 |
| Msa1276510 | Msa1445400 | -0.808365 | 3.210435e-50 | -8.615850e-47 |
| Msa1276510 | Msa1449350 | -0.808629 | 2.819116e-50 | -8.615850e-47 |
| Msa1276510 | Msa1459760 | -0.805835 | 1.102064e-49 | -8.615850e-47 |
| Msa1276510 | Msa1462060 | 0.812106 | 5.009460e-51 | -8.615850e-47 |
| Msa0365490 | Msa1276510 | 0.824407 | 8.206433e-54 | -8.615850e-47 |
| Msa0370430 | Msa1276510 | 0.802627 | 5.127791e-49 | -8.615850e-47 |
| Msa0388030 | Msa1276510 | -0.829574 | 4.770145e-55 | -8.615850e-47 |
| Msa0388840 | Msa1276510 | 0.817846 | 2.668040e-52 | -8.615850e-47 |
| Msa0389810 | Msa1276510 | 0.854627 | 1.085402e-61 | -8.615850e-47 |
| Msa0394340 | Msa1276510 | 0.846154 | 2.596332e-59 | -8.615850e-47 |
| Msa0433530 | Msa1276510 | 0.810394 | 1.178260e-50 | -8.615850e-47 |
| Msa0442200 | Msa1276510 | 0.801755 | 7.751605e-49 | -8.615850e-47 |
| Msa0457510 | Msa1276510 | 0.821962 | 3.054693e-53 | -8.615850e-47 |
| Msa0464900 | Msa1276510 | 0.841505 | 4.562805e-58 | -8.615850e-47 |
| Msa0468130 | Msa1276510 | 0.858411 | 8.393524e-63 | -8.615850e-47 |
| Msa0472960 | Msa1276510 | -0.807359 | 5.254668e-50 | -8.615850e-47 |
| Msa0477260 | Msa1276510 | 0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa0482190 | Msa1276510 | -0.813027 | 3.150118e-51 | -8.615850e-47 |
| Msa0982270 | Msa1276510 | 0.854338 | 1.315745e-61 | -8.615850e-47 |
| Msa1006850 | Msa1276510 | 0.832786 | 7.750273e-56 | -8.615850e-47 |
| Msa1021510 | Msa1276510 | 0.808217 | 3.451254e-50 | -8.615850e-47 |
| Msa1026410 | Msa1276510 | 0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa1045450 | Msa1276510 | 0.802232 | 6.185339e-49 | -8.615850e-47 |
| Msa1070840 | Msa1276510 | 0.814986 | 1.165092e-51 | -8.615850e-47 |
| Msa1075080 | Msa1276510 | -0.804429 | 2.169507e-49 | -8.615850e-47 |
| Msa1079730 | Msa1276510 | -0.805807 | 1.116800e-49 | -8.615850e-47 |
| Msa1080330 | Msa1276510 | -0.800738 | 1.252145e-48 | -8.615850e-47 |
| Msa1088710 | Msa1276510 | 0.809871 | 1.527151e-50 | -8.615850e-47 |
| Msa1092090 | Msa1276510 | 0.837274 | 5.726249e-57 | -8.615850e-47 |
| Msa1105500 | Msa1276510 | 0.807107 | 5.941694e-50 | -8.615850e-47 |
| Msa0241740 | Msa1276510 | 0.815922 | 7.213490e-52 | -8.615850e-47 |
| Msa0262370 | Msa1276510 | 0.813521 | 2.454217e-51 | -8.615850e-47 |
| Msa0266210 | Msa1276510 | 0.805480 | 1.308364e-49 | -8.615850e-47 |
| Msa0266240 | Msa1276510 | 0.818189 | 2.231330e-52 | -8.615850e-47 |
| Msa0271580 | Msa1276510 | 0.830824 | 2.362780e-55 | -8.615850e-47 |
| Msa0271650 | Msa1276510 | 0.820120 | 8.110880e-53 | -8.615850e-47 |
| Msa0278900 | Msa1276510 | 0.804643 | 1.957524e-49 | -8.615850e-47 |
| Msa0287670 | Msa1276510 | 0.807410 | 5.123693e-50 | -8.615850e-47 |
| Msa0300150 | Msa1276510 | 0.804580 | 2.017652e-49 | -8.615850e-47 |
| Msa0307470 | Msa1276510 | 0.819104 | 1.383497e-52 | -8.615850e-47 |
| Msa0309270 | Msa1276510 | 0.807456 | 5.009464e-50 | -8.615850e-47 |
| Msa0310430 | Msa1276510 | 0.805071 | 1.593064e-49 | -8.615850e-47 |
| Msa0319130 | Msa1276510 | 0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0347610 | Msa1276510 | 0.852380 | 4.794341e-61 | -8.615850e-47 |
| Msa0363170 | Msa1276510 | 0.811309 | 7.465433e-51 | -8.615850e-47 |
| Msa1109820 | Msa1276510 | 0.820087 | 8.256608e-53 | -8.615850e-47 |
| Msa1118760 | Msa1276510 | 0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa1124540 | Msa1276510 | -0.820239 | 7.618997e-53 | -8.615850e-47 |
| Msa1129210 | Msa1276510 | 0.824860 | 6.420368e-54 | -8.615850e-47 |
| Msa1135880 | Msa1276510 | 0.813173 | 2.926799e-51 | -8.615850e-47 |
| Msa1155350 | Msa1276510 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa1156150 | Msa1276510 | -0.802239 | 6.165805e-49 | -8.615850e-47 |
| Msa1158670 | Msa1276510 | 0.819352 | 1.214928e-52 | -8.615850e-47 |
| Msa1163590 | Msa1276510 | -0.811144 | 8.106981e-51 | -8.615850e-47 |
| Msa1168040 | Msa1276510 | -0.822913 | 1.836797e-53 | -8.615850e-47 |
| Msa1174310 | Msa1276510 | 0.944921 | 7.990402e-104 | -8.615850e-47 |
| Msa1177780 | Msa1276510 | 0.837385 | 5.362226e-57 | -8.615850e-47 |
| Msa1183770 | Msa1276510 | 0.803697 | 3.080033e-49 | -8.615850e-47 |
| Msa1202750 | Msa1276510 | 0.819885 | 9.181315e-53 | -8.615850e-47 |
| Msa1207460 | Msa1276510 | -0.824200 | 9.181567e-54 | -8.615850e-47 |
| Msa1222280 | Msa1276510 | 0.856887 | 2.374293e-62 | -8.615850e-47 |
| Msa0485490 | Msa1276510 | 0.811278 | 7.584083e-51 | -8.615850e-47 |
| Msa0485500 | Msa1276510 | -0.806992 | 6.282975e-50 | -8.615850e-47 |
| Msa0489610 | Msa1276510 | 0.853679 | 2.037694e-61 | -8.615850e-47 |
| Msa0504410 | Msa1276510 | 0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0510040 | Msa1276510 | 0.802459 | 5.554556e-49 | -8.615850e-47 |
| Msa0526670 | Msa1276510 | -0.821437 | 4.040308e-53 | -8.615850e-47 |
| Msa0530650 | Msa1276510 | 0.856066 | 4.134141e-62 | -8.615850e-47 |
| Msa0557950 | Msa1276510 | -0.824277 | 8.807747e-54 | -8.615850e-47 |
| Msa0577120 | Msa1276510 | 0.800829 | 1.199275e-48 | -8.615850e-47 |
| Msa0587190 | Msa1276510 | 0.859642 | 3.591976e-63 | -8.615850e-47 |
| Msa0588240 | Msa1276510 | 0.812009 | 5.258610e-51 | -8.615850e-47 |
| Msa0594790 | Msa1276510 | 0.810123 | 1.347847e-50 | -8.615850e-47 |
| Msa0842770 | Msa1276510 | 0.807156 | 5.801099e-50 | -8.615850e-47 |
| Msa0845070 | Msa1276510 | 0.809269 | 2.056796e-50 | -8.615850e-47 |
| Msa0864470 | Msa1276510 | -0.823480 | 1.354267e-53 | -8.615850e-47 |
| Msa0876360 | Msa1276510 | 0.836332 | 9.954595e-57 | -8.615850e-47 |
| Msa0877710 | Msa1276510 | 0.802391 | 5.736022e-49 | -8.615850e-47 |
| Msa0881160 | Msa1276510 | 0.819627 | 1.051697e-52 | -8.615850e-47 |
| Msa0901320 | Msa1276510 | 0.816553 | 5.212866e-52 | -8.615850e-47 |
| Msa0930820 | Msa1276510 | 0.812196 | 4.787796e-51 | -8.615850e-47 |
| Msa0941540 | Msa1276510 | 0.849775 | 2.604740e-60 | -8.615850e-47 |
| Msa0966630 | Msa1276510 | 0.805050 | 1.609579e-49 | -8.615850e-47 |
| Msa0978700 | Msa1276510 | 0.818920 | 1.523883e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276510 | MtrunA17_Chr8g0344131 | 97.135 | 733 | 13 | 5 | 1 | 732 | 1 | 726 | 0.0 | 1461 |
| Msa1276510 | MtrunA17_Chr7g0269591 | 35.680 | 412 | 218 | 10 | 227 | 593 | 146 | 555 | 1.86e-62 | 224 |
| Msa1276510 | MtrunA17_Chr5g0395711 | 43.541 | 209 | 106 | 3 | 221 | 417 | 121 | 329 | 1.18e-37 | 151 |
| Msa1276510 | MtrunA17_Chr5g0395711 | 50.394 | 127 | 54 | 2 | 443 | 560 | 446 | 572 | 1.68e-28 | 122 |
| Msa1276510 | MtrunA17_Chr4g0069291 | 29.846 | 325 | 197 | 6 | 252 | 552 | 116 | 433 | 1.64e-33 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276510 | AT3G14050.1 | 67.121 | 733 | 198 | 9 | 1 | 721 | 2 | 703 | 0.0 | 907 |
| Msa1276510 | AT1G54130.1 | 64.495 | 752 | 204 | 14 | 1 | 730 | 2 | 712 | 0.0 | 892 |
| Msa1276510 | AT4G02260.3 | 39.316 | 351 | 188 | 7 | 227 | 552 | 148 | 498 | 3.40e-60 | 218 |
| Msa1276510 | AT4G02260.4 | 39.316 | 351 | 188 | 7 | 227 | 552 | 148 | 498 | 5.86e-60 | 218 |
| Msa1276510 | AT4G02260.2 | 39.316 | 351 | 188 | 7 | 227 | 552 | 148 | 498 | 6.37e-60 | 218 |
| Msa1276510 | AT4G02260.1 | 39.205 | 352 | 188 | 8 | 227 | 552 | 148 | 499 | 2.33e-58 | 213 |
| Msa1276510 | AT3G17470.3 | 31.212 | 330 | 198 | 7 | 246 | 552 | 107 | 430 | 4.46e-37 | 145 |
| Msa1276510 | AT3G17470.1 | 31.212 | 330 | 198 | 7 | 246 | 552 | 107 | 430 | 3.97e-36 | 144 |
| Msa1276510 | AT3G17470.2 | 31.212 | 330 | 198 | 7 | 246 | 552 | 122 | 445 | 4.43e-36 | 144 |
Find 189 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATCTTCAACTTGCAATT+TGG | 0.118666 | 8_3:+11196211 | None:intergenic |
| TTGTAAATTCATCTCTTCTT+AGG | 0.139163 | 8_3:-11199794 | Msa1276510:five_prime_UTR |
| ATTAACTATGATTTCGAATT+AGG | 0.147309 | 8_3:-11199482 | Msa1276510:CDS |
| GATGATATCCATGACATTTA+TGG | 0.178626 | 8_3:-11197252 | Msa1276510:CDS |
| CTTACTTATGATTATATATA+CGG | 0.188737 | 8_3:-11198602 | Msa1276510:CDS |
| GATGGTGTTGGTGGTGATTC+TGG | 0.210059 | 8_3:-11199020 | Msa1276510:CDS |
| ATGCATTTGCAAGCAGAATT+TGG | 0.213922 | 8_3:-11196954 | Msa1276510:CDS |
| TGCTTTGGGTTCTTCTTGTT+TGG | 0.222221 | 8_3:-11199096 | Msa1276510:CDS |
| TTGTGAAGAGTTTGTTATTA+AGG | 0.223595 | 8_3:-11198877 | Msa1276510:CDS |
| ATTTCTTATCATGTCATTTC+TGG | 0.239861 | 8_3:-11197542 | Msa1276510:CDS |
| AATTTGAAGAATTGAATAAT+TGG | 0.241284 | 8_3:+11199694 | None:intergenic |
| TCGAGTTTGCACAAAATTCT+TGG | 0.262479 | 8_3:+11196347 | None:intergenic |
| TTGCAATTTGGATCACTTAC+AGG | 0.265645 | 8_3:+11196223 | None:intergenic |
| CTGAATTTCTTCCCTATATT+CGG | 0.288112 | 8_3:+11196144 | None:intergenic |
| GCGACGGCGGCGTCTACGTC+TGG | 0.303823 | 8_3:-11199431 | Msa1276510:CDS |
| CTCGACAGTACTAGATTTGT+TGG | 0.308633 | 8_3:-11196329 | Msa1276510:CDS |
| TAGAAGTTGTTCACCGGTTA+TGG | 0.315278 | 8_3:-11197185 | Msa1276510:CDS |
| CAATCAGGCTTGTAAGAATA+TGG | 0.320693 | 8_3:+11196744 | None:intergenic |
| TCCGTATTTGCAGCATTGTT+TGG | 0.330409 | 8_3:-11198711 | Msa1276510:CDS |
| GATTATATATACGGGATGTT+TGG | 0.331195 | 8_3:-11198593 | Msa1276510:CDS |
| ACCGATTAGGAATAGCTAAT+TGG | 0.332077 | 8_3:-11197709 | Msa1276510:CDS |
| AAGAGCTGTCCTCATTAAAT+TGG | 0.336185 | 8_3:-11197831 | Msa1276510:CDS |
| CGACGAAGTTTGGTGGATCT+TGG | 0.336434 | 8_3:-11199259 | Msa1276510:CDS |
| TCCAATTAGCTATTCCTAAT+CGG | 0.340721 | 8_3:+11197708 | None:intergenic |
| GCACCTTTGGCCAACCGATT+AGG | 0.347291 | 8_3:-11197722 | Msa1276510:CDS |
| ACAAGTATCTGACCGAATAT+AGG | 0.349388 | 8_3:-11196156 | Msa1276510:CDS |
| TGTAAATTCATCTCTTCTTA+GGG | 0.349575 | 8_3:-11199793 | Msa1276510:five_prime_UTR |
| TTTGGAAACTGCTGTGTTGT+TGG | 0.368793 | 8_3:-11198693 | Msa1276510:CDS |
| GGTGGTGGTGGTGAATTTGA+TGG | 0.370524 | 8_3:-11199038 | Msa1276510:CDS |
| CAAAATATAACTTAAATAAC+TGG | 0.370941 | 8_3:+11195894 | None:intergenic |
| ATGATATCCATGACATTTAT+GGG | 0.372392 | 8_3:-11197251 | Msa1276510:CDS |
| TGGGTTTGTGAGAAGTGCTT+TGG | 0.378293 | 8_3:-11199111 | Msa1276510:CDS |
| ATCAACAACTTCTTAGCATA+AGG | 0.384347 | 8_3:+11198927 | None:intergenic |
| GAGAGATCATAGTCCAGTTT+CGG | 0.385330 | 8_3:-11199234 | Msa1276510:CDS |
| GAAAGCTCTTTGTGCTGTAC+AGG | 0.386440 | 8_3:+11197647 | None:intergenic |
| ATTCTTACAAGCCTGATTGC+GGG | 0.405333 | 8_3:-11196740 | Msa1276510:CDS |
| TAACCGGTGAACAACTTCTA+AGG | 0.405585 | 8_3:+11197188 | None:intergenic |
| CTTTGCAAACCTCTGCTGCT+TGG | 0.408434 | 8_3:+11197763 | None:intergenic |
| TTGTTCGAATTTGTACTTCA+AGG | 0.408493 | 8_3:+11196982 | None:intergenic |
| CCTCCCTGATCGAATTGTTC+CGG | 0.409534 | 8_3:+11199160 | None:intergenic |
| GATGACACTAGATGCATTAC+CGG | 0.413123 | 8_3:-11197789 | Msa1276510:CDS |
| GGCGTCTACGTCTGGGAAAT+CGG | 0.414943 | 8_3:-11199423 | Msa1276510:CDS |
| GGTGGTGAATTTGATGGTGT+TGG | 0.416217 | 8_3:-11199032 | Msa1276510:CDS |
| GGGTTTGTGAGAAGTGCTTT+GGG | 0.417938 | 8_3:-11199110 | Msa1276510:CDS |
| GGAGTTGCTGATTTAGTTGA+AGG | 0.421830 | 8_3:-11198566 | Msa1276510:CDS |
| TCCAAACAATGCTGCAAATA+CGG | 0.422488 | 8_3:+11198710 | None:intergenic |
| CAAGTATCTGACCGAATATA+GGG | 0.424375 | 8_3:-11196155 | Msa1276510:CDS |
| GAGGTTTGCAAAGGAAACTT+TGG | 0.428632 | 8_3:-11197753 | Msa1276510:CDS |
| AACCTCTGCTGCTTGGCAAC+CGG | 0.433003 | 8_3:+11197770 | None:intergenic |
| AATGATTGATTTATGTAGTT+GGG | 0.435766 | 8_3:-11195917 | Msa1276510:three_prime_UTR |
| ATGGGTGCCGGTGCGGGTAC+CGG | 0.442415 | 8_3:-11199179 | Msa1276510:CDS |
| ATCTCTGCACACTGTGGTGA+TGG | 0.443111 | 8_3:-11197021 | Msa1276510:CDS |
| AGTAAAGATTCCACTTCTGT+TGG | 0.443308 | 8_3:-11196822 | Msa1276510:CDS |
| TGTTTGGATTATGATTCTAC+TGG | 0.445310 | 8_3:-11199080 | Msa1276510:CDS |
| AATTTGGATTCGCTGCTCAT+TGG | 0.445751 | 8_3:-11196938 | Msa1276510:CDS |
| TCCAAATTGCAAGTTGAAGA+TGG | 0.447857 | 8_3:-11196212 | Msa1276510:CDS |
| CATGCACCTCAGACCATAAC+CGG | 0.449375 | 8_3:+11197172 | None:intergenic |
| ACAGGCTTGTGATTCAGTCT+TGG | 0.449925 | 8_3:+11196241 | None:intergenic |
| TACAACATACCCATTGAACT+TGG | 0.450219 | 8_3:+11197122 | None:intergenic |
| ATGCTACTACTACACGAAAC+AGG | 0.451567 | 8_3:+11199200 | None:intergenic |
| AATTCAACAGTAGTTGCTGC+TGG | 0.454268 | 8_3:-11198656 | Msa1276510:CDS |
| ATACATTGCCCCAAGTTCAA+TGG | 0.454579 | 8_3:-11197132 | Msa1276510:CDS |
| TAGATTTGTTGGAGAGGGTC+GGG | 0.457657 | 8_3:-11196318 | Msa1276510:CDS |
| TGGTGGTGATTCTGGAATTG+TGG | 0.457934 | 8_3:-11199012 | Msa1276510:CDS |
| ATCTTCGTCACCGGCGTCTA+CGG | 0.466938 | 8_3:-11199453 | Msa1276510:CDS |
| TTGGATTCGCTGCTCATTGG+AGG | 0.470246 | 8_3:-11196935 | Msa1276510:CDS |
| AGTAGCATGGGTGCCGGTGC+GGG | 0.474221 | 8_3:-11199185 | Msa1276510:CDS |
| TACGTCTGGGAAATCGGTGA+TGG | 0.474358 | 8_3:-11199417 | Msa1276510:CDS |
| AGGGGAGGAGTGTGAAAAGA+CGG | 0.474476 | 8_3:+11199966 | None:intergenic |
| TACATTGCCCCAAGTTCAAT+GGG | 0.477235 | 8_3:-11197131 | Msa1276510:intron |
| GCTGTGTTGTTGGCTTTGAT+CGG | 0.482957 | 8_3:-11198683 | Msa1276510:CDS |
| GCCTCAATTCTTCCTTCAGA+GGG | 0.483136 | 8_3:+11196263 | None:intergenic |
| CGATCAGGGAGGGGAAGTAC+TGG | 0.484040 | 8_3:-11199149 | Msa1276510:CDS |
| GAATGATTGATTTATGTAGT+TGG | 0.484156 | 8_3:-11195918 | Msa1276510:three_prime_UTR |
| GGTACCGGAACAATTCGATC+AGG | 0.485761 | 8_3:-11199164 | Msa1276510:CDS |
| TGTTCGAATTTGTACTTCAA+GGG | 0.486391 | 8_3:+11196983 | None:intergenic |
| GCTGCGCTTGATTGTTGATA+AGG | 0.487554 | 8_3:-11197229 | Msa1276510:CDS |
| AGCTTTCTCAGCTTCACAAA+AGG | 0.487843 | 8_3:+11198854 | None:intergenic |
| GAATGAATAAGGAACAAGAA+GGG | 0.488008 | 8_3:+11199947 | None:intergenic |
| AGATTACGCGGTGGTGGTGG+TGG | 0.491666 | 8_3:-11199053 | Msa1276510:CDS |
| GGGAGGGGAAGTACTGGTGG+TGG | 0.494745 | 8_3:-11199143 | Msa1276510:CDS |
| GGGGAGGAGTGTGAAAAGAC+GGG | 0.494899 | 8_3:+11199967 | None:intergenic |
| GGGCTCGATGGGTTGTCACC+TGG | 0.495606 | 8_3:-11196860 | Msa1276510:CDS |
| GTTAGATTACGCGGTGGTGG+TGG | 0.504725 | 8_3:-11199056 | Msa1276510:CDS |
| AGATACTTGTCAGGTATGGC+TGG | 0.505901 | 8_3:+11196169 | None:intergenic |
| AGAGCTTTCGTCAAAGCTTG+TGG | 0.510991 | 8_3:-11197633 | Msa1276510:CDS |
| TTACTTATGATTATATATAC+GGG | 0.511289 | 8_3:-11198601 | Msa1276510:CDS |
| TTACGCGGTGGTGGTGGTGG+TGG | 0.511301 | 8_3:-11199050 | Msa1276510:CDS |
| TATTCGGTCAGATACTTGTC+AGG | 0.512446 | 8_3:+11196160 | None:intergenic |
| TGAAAAGACGGGTTTAACCT+TGG | 0.513700 | 8_3:+11199978 | None:intergenic |
| ATCTTCATCACCACCACCAC+CGG | 0.515186 | 8_3:+11199325 | None:intergenic |
| CGCTGCTCATTGGAGGTACA+AGG | 0.516170 | 8_3:-11196928 | Msa1276510:CDS |
| TTCTTCATATGTGCTTCAGA+TGG | 0.516537 | 8_3:-11196889 | Msa1276510:CDS |
| GGTGAATTTGATGGTGTTGG+TGG | 0.516562 | 8_3:-11199029 | Msa1276510:CDS |
| CGGTTATGGTCTGAGGTGCA+TGG | 0.519568 | 8_3:-11197171 | Msa1276510:CDS |
| CTAGATTTGTTGGAGAGGGT+CGG | 0.525008 | 8_3:-11196319 | Msa1276510:CDS |
| TTACAAGCCTGATTGCGGGC+AGG | 0.526518 | 8_3:-11196736 | Msa1276510:CDS |
| GGAGGGGAAGTACTGGTGGT+GGG | 0.527525 | 8_3:-11199142 | Msa1276510:CDS |
| GGCCTCAATTCTTCCTTCAG+AGG | 0.533475 | 8_3:+11196262 | None:intergenic |
| TGAGAAAGCTCATAGAGGAC+AGG | 0.534366 | 8_3:-11198841 | Msa1276510:intron |
| TGGTGATGAAGATGAATTGA+AGG | 0.535373 | 8_3:-11199315 | Msa1276510:CDS |
| ACAACATACCCATTGAACTT+GGG | 0.535483 | 8_3:+11197123 | None:intergenic |
| GTCACCGGCGTCTACGGCGA+CGG | 0.537490 | 8_3:-11199447 | Msa1276510:CDS |
| AGATGGTTGAGTGGGCTCGA+TGG | 0.537950 | 8_3:-11196872 | Msa1276510:CDS |
| GCTGTGACTAAATCAAATGT+TGG | 0.538779 | 8_3:+11196016 | None:intergenic |
| GATGGTTGAGTGGGCTCGAT+GGG | 0.540134 | 8_3:-11196871 | Msa1276510:CDS |
| CGGGCTAACTGTATCAAGCA+TGG | 0.545579 | 8_3:-11196107 | Msa1276510:CDS |
| AACATATAGGTTCCCTCTGA+AGG | 0.546405 | 8_3:-11196275 | Msa1276510:CDS |
| GACAGTTATCAGCATGAGAA+GGG | 0.546477 | 8_3:+11196766 | None:intergenic |
| TGTTTCGTGTAGTAGTAGCA+TGG | 0.546500 | 8_3:-11199198 | Msa1276510:CDS |
| ATCGACAAATCCAACAGAAG+TGG | 0.547140 | 8_3:+11196812 | None:intergenic |
| ATATACGGGATGTTTGGAGC+TGG | 0.549390 | 8_3:-11198587 | Msa1276510:CDS |
| CCAAATTGCAAGTTGAAGAT+GGG | 0.550752 | 8_3:-11196211 | Msa1276510:CDS |
| AATTGTTCCGGTACCCGCAC+CGG | 0.551906 | 8_3:+11199172 | None:intergenic |
| ATTAGCTATTCCTAATCGGT+TGG | 0.552553 | 8_3:+11197712 | None:intergenic |
| CTCTTGCATCTGCCATTGCA+AGG | 0.553256 | 8_3:+11197849 | None:intergenic |
| TTGCAAGGAACATTGTATGC+AGG | 0.553528 | 8_3:+11197864 | None:intergenic |
| GAGCAAGCACTCAAAGATGA+AGG | 0.553848 | 8_3:-11197566 | Msa1276510:CDS |
| GCATACAATGTTCCTTGCAA+TGG | 0.556040 | 8_3:-11197861 | Msa1276510:CDS |
| ACGTCTGGGAAATCGGTGAT+GGG | 0.557642 | 8_3:-11199416 | Msa1276510:CDS |
| ATTCAACAGTAGTTGCTGCT+GGG | 0.558656 | 8_3:-11198655 | Msa1276510:CDS |
| TAGTAGCATGGGTGCCGGTG+CGG | 0.559495 | 8_3:-11199186 | Msa1276510:CDS |
| TATTCTTACAAGCCTGATTG+CGG | 0.560842 | 8_3:-11196741 | Msa1276510:CDS |
| GCTACTGCAAGCAGCATGGT+TGG | 0.562551 | 8_3:-11196076 | Msa1276510:CDS |
| GGTCAGATACTTGTCAGGTA+TGG | 0.563602 | 8_3:+11196165 | None:intergenic |
| AGCGCAGCCCATAAATGTCA+TGG | 0.564123 | 8_3:+11197244 | None:intergenic |
| TACCGGTTGCCAAGCAGCAG+AGG | 0.564469 | 8_3:-11197772 | Msa1276510:CDS |
| GGAACAATTCGATCAGGGAG+GGG | 0.565296 | 8_3:-11199158 | Msa1276510:CDS |
| CGACGGCGGCGTCTACGTCT+GGG | 0.569402 | 8_3:-11199430 | Msa1276510:CDS |
| GGAATGAATAAGGAACAAGA+AGG | 0.570177 | 8_3:+11199946 | None:intergenic |
| CTTATCATGTCATTTCTGGA+CGG | 0.571086 | 8_3:-11197538 | Msa1276510:CDS |
| CAACATACCCATTGAACTTG+GGG | 0.571860 | 8_3:+11197124 | None:intergenic |
| GGACAGTTATCAGCATGAGA+AGG | 0.573734 | 8_3:+11196765 | None:intergenic |
| GCTGTAGGTTGACAACATAT+AGG | 0.573805 | 8_3:-11196288 | Msa1276510:CDS |
| TGTTCACCGGTTATGGTCTG+AGG | 0.575398 | 8_3:-11197178 | Msa1276510:CDS |
| AATGAATAAGGAACAAGAAG+GGG | 0.578319 | 8_3:+11199948 | None:intergenic |
| GAGTTGCTGATTTAGTTGAA+GGG | 0.580287 | 8_3:-11198565 | Msa1276510:CDS |
| TCTCTGCACACTGTGGTGAT+GGG | 0.580339 | 8_3:-11197020 | Msa1276510:CDS |
| ATCGATCAGCCAATTTAATG+AGG | 0.581475 | 8_3:+11197822 | None:intergenic |
| GAATAAGGAACAAGAAGGGG+AGG | 0.582290 | 8_3:+11199951 | None:intergenic |
| GTTTCGTGTAGTAGTAGCAT+GGG | 0.582976 | 8_3:-11199197 | Msa1276510:CDS |
| AAGCCTTAGAAGTTGTTCAC+CGG | 0.583932 | 8_3:-11197191 | Msa1276510:CDS |
| GGGTCGGGCGAGCAAGCTGT+AGG | 0.584040 | 8_3:-11196303 | Msa1276510:CDS |
| ACTGAGTCACTTAAGCAAGC+TGG | 0.586111 | 8_3:-11197930 | Msa1276510:CDS |
| AGTACTAGATTTGTTGGAGA+GGG | 0.591903 | 8_3:-11196323 | Msa1276510:CDS |
| CGGAACAATTCGATCAGGGA+GGG | 0.592758 | 8_3:-11199159 | Msa1276510:CDS |
| GGTTATGGTCTGAGGTGCAT+GGG | 0.593196 | 8_3:-11197170 | Msa1276510:CDS |
| CACACTGTGGTGATGGGTGA+AGG | 0.596315 | 8_3:-11197014 | Msa1276510:CDS |
| AAAGCTCTTTGTGCTGTACA+GGG | 0.599815 | 8_3:+11197648 | None:intergenic |
| GGTGTAGAACACACACTACT+CGG | 0.601489 | 8_3:+11199512 | None:intergenic |
| ATTAGGAATAGCTAATTGGA+AGG | 0.601826 | 8_3:-11197705 | Msa1276510:CDS |
| TTCAGCGAATGTATGATCGC+GGG | 0.602849 | 8_3:-11196126 | Msa1276510:CDS |
| GCGCTTGATTGTTGATAAGG+AGG | 0.603331 | 8_3:-11197226 | Msa1276510:CDS |
| TGTAGTAGTAGCATGGGTGC+CGG | 0.604049 | 8_3:-11199191 | Msa1276510:CDS |
| GTTCGAATTTGTACTTCAAG+GGG | 0.605083 | 8_3:+11196984 | None:intergenic |
| ATTCCTAATCGGTTGGCCAA+AGG | 0.606063 | 8_3:+11197719 | None:intergenic |
| CAAGCAGCAGAGGTTTGCAA+AGG | 0.607809 | 8_3:-11197762 | Msa1276510:CDS |
| GCATGAGAAGGGAACTTGCA+AGG | 0.608349 | 8_3:+11196777 | None:intergenic |
| TCAGGGAGGGGAAGTACTGG+TGG | 0.609082 | 8_3:-11199146 | Msa1276510:CDS |
| TGTGCTTCAGATGGTTGAGT+GGG | 0.610056 | 8_3:-11196880 | Msa1276510:CDS |
| ATGTGCTTCAGATGGTTGAG+TGG | 0.615998 | 8_3:-11196881 | Msa1276510:CDS |
| AGGATCTAGATCTTCGTCAC+CGG | 0.616184 | 8_3:-11199462 | Msa1276510:CDS |
| GGGCTAACTGTATCAAGCAT+GGG | 0.621683 | 8_3:-11196106 | Msa1276510:CDS |
| TGTGGTGATGGGTGAAGGCA+AGG | 0.624487 | 8_3:-11197009 | Msa1276510:CDS |
| TACTGCTACTGCAAGCAGCA+TGG | 0.624524 | 8_3:-11196080 | Msa1276510:CDS |
| GGTGTTAGATTACGCGGTGG+TGG | 0.624885 | 8_3:-11199059 | Msa1276510:CDS |
| GCCGCCGTCGCCGTAGACGC+CGG | 0.625619 | 8_3:+11199443 | None:intergenic |
| AAATCATAGTTAATCTGATG+CGG | 0.628203 | 8_3:+11199491 | None:intergenic |
| TCCCTCTGAAGGAAGAATTG+AGG | 0.628438 | 8_3:-11196264 | Msa1276510:CDS |
| CAAGATCCACCAAACTTCGT+CGG | 0.628498 | 8_3:+11199260 | None:intergenic |
| TCTGGGAAATCGGTGATGGG+TGG | 0.638476 | 8_3:-11199413 | Msa1276510:CDS |
| CAGTACTAGATTTGTTGGAG+AGG | 0.642485 | 8_3:-11196324 | Msa1276510:CDS |
| TGTTTGTAGATGCGAGCTAG+TGG | 0.645770 | 8_3:-11198737 | Msa1276510:intron |
| GAAGCTGAGAAAGCTCATAG+AGG | 0.646306 | 8_3:-11198846 | Msa1276510:CDS |
| TCTACTGGTGTTAGATTACG+CGG | 0.646568 | 8_3:-11199065 | Msa1276510:CDS |
| AGTTGCTGATTTAGTTGAAG+GGG | 0.648111 | 8_3:-11198564 | Msa1276510:intron |
| ACCGGCGTCTACGGCGACGG+CGG | 0.651192 | 8_3:-11199444 | Msa1276510:CDS |
| ACATGCTGCTTCACCACCGT+CGG | 0.651198 | 8_3:+11199368 | None:intergenic |
| TCAATCATGATAACAAACAC+AGG | 0.655763 | 8_3:+11196708 | None:intergenic |
| CAAGGAACATTGTATGCAGG+CGG | 0.659437 | 8_3:+11197867 | None:intergenic |
| GTACCGGAACAATTCGATCA+GGG | 0.659700 | 8_3:-11199163 | Msa1276510:CDS |
| ATTCAGCGAATGTATGATCG+CGG | 0.666404 | 8_3:-11196127 | Msa1276510:CDS |
| ATATACAAATGAATGTGCCG+AGG | 0.677700 | 8_3:+11199758 | None:intergenic |
| CCGGAACAATTCGATCAGGG+AGG | 0.701868 | 8_3:-11199160 | Msa1276510:CDS |
| TATCATGATTGAGAATGACA+AGG | 0.707357 | 8_3:-11196697 | Msa1276510:intron |
| GTAGAACACACACTACTCGG+TGG | 0.713186 | 8_3:+11199515 | None:intergenic |
| ACTGGTGTTAGATTACGCGG+TGG | 0.729692 | 8_3:-11199062 | Msa1276510:CDS |
| TGAGAAGGGAACTTGCAAGG+TGG | 0.737719 | 8_3:+11196780 | None:intergenic |
| TTATCAATCTCTGCACACTG+TGG | 0.751179 | 8_3:-11197027 | Msa1276510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGAAGAATTGAATAAT+TGG | + | chr8_3:11196195-11196214 | None:intergenic | 15.0% |
| !! | CTTACTTATGATTATATATA+CGG | - | chr8_3:11197284-11197303 | Msa1276510:intron | 15.0% |
| !! | TTACTTATGATTATATATAC+GGG | - | chr8_3:11197285-11197304 | Msa1276510:intron | 15.0% |
| !!! | TAGAATTATGTTCAATATTT+TGG | - | chr8_3:11199219-11199238 | Msa1276510:CDS | 15.0% |
| !!! | AGAATTATGTTCAATATTTT+GGG | - | chr8_3:11199220-11199239 | Msa1276510:CDS | 15.0% |
| !! | CAAAATATAACTTAAATAAC+TGG | + | chr8_3:11199995-11200014 | None:intergenic | 15.0% |
| !!! | TTTAACCTTGGATTTTTTTT+TGG | + | chr8_3:11195899-11195918 | None:intergenic | 20.0% |
| !!! | TTGTTTGTGTTTATGTTTTA+TGG | + | chr8_3:11195967-11195986 | None:intergenic | 20.0% |
| !! | AGAGATGAATTTACAAAAAA+GGG | + | chr8_3:11196088-11196107 | None:intergenic | 20.0% |
| !! | AAGAGATGAATTTACAAAAA+AGG | + | chr8_3:11196089-11196108 | None:intergenic | 20.0% |
| !!! | TGTTTTTTAATTTTGTACAG+AGG | + | chr8_3:11196225-11196244 | None:intergenic | 20.0% |
| !!! | TTCTTCTTCTTTTTCAATTT+GGG | + | chr8_3:11196298-11196317 | None:intergenic | 20.0% |
| !! | ATTAACTATGATTTCGAATT+AGG | - | chr8_3:11196404-11196423 | Msa1276510:intron | 20.0% |
| !!! | TTTAAGATTAAGATGATTGA+TGG | - | chr8_3:11197385-11197404 | Msa1276510:intron | 20.0% |
| !! | ATAAATAATGAAATGAAAGC+AGG | + | chr8_3:11199271-11199290 | None:intergenic | 20.0% |
| !!! | AATGATTGATTTATGTAGTT+GGG | - | chr8_3:11199969-11199988 | Msa1276510:five_prime_UTR | 20.0% |
| !! | TTTGTGTTTATGTTTTATGG+AGG | + | chr8_3:11195964-11195983 | None:intergenic | 25.0% |
| ! | AATTTACAAAAAAGGGATTC+TGG | + | chr8_3:11196081-11196100 | None:intergenic | 25.0% |
| ! | TTGTAAATTCATCTCTTCTT+AGG | - | chr8_3:11196092-11196111 | Msa1276510:CDS | 25.0% |
| ! | TGTAAATTCATCTCTTCTTA+GGG | - | chr8_3:11196093-11196112 | Msa1276510:CDS | 25.0% |
| !!! | CTTTTTCAATTTGGGAATTA+GGG | + | chr8_3:11196290-11196309 | None:intergenic | 25.0% |
| !!! | TCTTTTTCAATTTGGGAATT+AGG | + | chr8_3:11196291-11196310 | None:intergenic | 25.0% |
| !!! | CTTCTTCTTCTTTTTCAATT+TGG | + | chr8_3:11196299-11196318 | None:intergenic | 25.0% |
| ! | AAATCATAGTTAATCTGATG+CGG | + | chr8_3:11196398-11196417 | None:intergenic | 25.0% |
| !! | TAATTTGGATGATACTTTTG+TGG | - | chr8_3:11196910-11196929 | Msa1276510:CDS | 25.0% |
| !!! | TTGTGAAGAGTTTGTTATTA+AGG | - | chr8_3:11197009-11197028 | Msa1276510:CDS | 25.0% |
| !! | TTATGTGTGTTTGTGATTTT+TGG | - | chr8_3:11197085-11197104 | Msa1276510:intron | 25.0% |
| !!! | TTTCGGTGTTAATCAATAAT+TGG | - | chr8_3:11197356-11197375 | Msa1276510:intron | 25.0% |
| !!! | TTCGGTGTTAATCAATAATT+GGG | - | chr8_3:11197357-11197376 | Msa1276510:intron | 25.0% |
| ! | TAATAACTACAAACATCAAG+AGG | + | chr8_3:11197607-11197626 | None:intergenic | 25.0% |
| ! | AATGACAATTCAAATCCATT+AGG | - | chr8_3:11197639-11197658 | Msa1276510:CDS | 25.0% |
| ! | CAAATCTATCATAAAAAGCT+AGG | + | chr8_3:11197687-11197706 | None:intergenic | 25.0% |
| !! | TTTTTGTATTGCTAGTGATT+TGG | - | chr8_3:11197760-11197779 | Msa1276510:CDS | 25.0% |
| !!! | AAACCGATTAATTTGTATTG+TGG | - | chr8_3:11197809-11197828 | Msa1276510:CDS | 25.0% |
| ! | CAACCACAATACAAATTAAT+CGG | + | chr8_3:11197815-11197834 | None:intergenic | 25.0% |
| !! | ATTTCTTATCATGTCATTTC+TGG | - | chr8_3:11198344-11198363 | Msa1276510:intron | 25.0% |
| !! | TTTGAAGTGTGCAAATAATA+TGG | + | chr8_3:11198565-11198584 | None:intergenic | 25.0% |
| ! | ATGATATCCATGACATTTAT+GGG | - | chr8_3:11198635-11198654 | Msa1276510:CDS | 25.0% |
| ! | TAAATCAGATGATATAGAGA+CGG | + | chr8_3:11198822-11198841 | None:intergenic | 25.0% |
| !!! | TTCAATATTTTGGGTTTAGT+TGG | - | chr8_3:11199229-11199248 | Msa1276510:CDS | 25.0% |
| ! | GAAAACAAGTGTTAAAACAA+AGG | + | chr8_3:11199312-11199331 | None:intergenic | 25.0% |
| ! | TTGTACAGATATTTGAAAAC+AGG | - | chr8_3:11199353-11199372 | Msa1276510:CDS | 25.0% |
| ! | AAACAGGAAACTGTTAAATT+AGG | - | chr8_3:11199369-11199388 | Msa1276510:CDS | 25.0% |
| ! | AACAGGAAACTGTTAAATTA+GGG | - | chr8_3:11199370-11199389 | Msa1276510:CDS | 25.0% |
| !!! | TTTTTTATCTCAAACCAAAC+AGG | - | chr8_3:11199425-11199444 | Msa1276510:CDS | 25.0% |
| !!! | TTTTTGAAGAACAAGCAAAA+GGG | + | chr8_3:11199846-11199865 | None:intergenic | 25.0% |
| !!! | ATTTTTGAAGAACAAGCAAA+AGG | + | chr8_3:11199847-11199866 | None:intergenic | 25.0% |
| !! | GAATGATTGATTTATGTAGT+TGG | - | chr8_3:11199968-11199987 | Msa1276510:five_prime_UTR | 25.0% |
| TTCCACCAAAAAAAAATCCA+AGG | - | chr8_3:11195891-11195910 | Msa1276510:three_prime_UTR | 30.0% | |
| !!! | AACCTTGGATTTTTTTTTGG+TGG | + | chr8_3:11195896-11195915 | None:intergenic | 30.0% |
| AATGAATAAGGAACAAGAAG+GGG | + | chr8_3:11195941-11195960 | None:intergenic | 30.0% | |
| GAATGAATAAGGAACAAGAA+GGG | + | chr8_3:11195942-11195961 | None:intergenic | 30.0% | |
| ! | GTTTTATGGAGGAATGAATA+AGG | + | chr8_3:11195953-11195972 | None:intergenic | 30.0% |
| AAAGAAGAAGAAGAAGAAGA+AGG | - | chr8_3:11196306-11196325 | Msa1276510:CDS | 30.0% | |
| !!! | AAGAAGAAGGTTTTGGTTTA+TGG | - | chr8_3:11196319-11196338 | Msa1276510:CDS | 30.0% |
| TGTTTGGATTATGATTCTAC+TGG | - | chr8_3:11196806-11196825 | Msa1276510:CDS | 30.0% | |
| !! | GGATGAGTTGACTTTTAATT+TGG | - | chr8_3:11196895-11196914 | Msa1276510:CDS | 30.0% |
| ATCAACAACTTCTTAGCATA+AGG | + | chr8_3:11196962-11196981 | None:intergenic | 30.0% | |
| GATTATATATACGGGATGTT+TGG | - | chr8_3:11197293-11197312 | Msa1276510:intron | 30.0% | |
| AACATGCAATGCAAATCAAA+AGG | + | chr8_3:11197419-11197438 | None:intergenic | 30.0% | |
| AGCTTATTGCATAAACCTAA+TGG | + | chr8_3:11197657-11197676 | None:intergenic | 30.0% | |
| TATGTTATGTGTTTGTCAAG+TGG | - | chr8_3:11197716-11197735 | Msa1276510:CDS | 30.0% | |
| !!! | AGTGATTTGGCTTTTTTGTA+TGG | - | chr8_3:11197773-11197792 | Msa1276510:CDS | 30.0% |
| !! | CGATTAATTTGTATTGTGGT+TGG | - | chr8_3:11197813-11197832 | Msa1276510:CDS | 30.0% |
| TCCAATTAGCTATTCCTAAT+CGG | + | chr8_3:11198181-11198200 | None:intergenic | 30.0% | |
| ATTAGGAATAGCTAATTGGA+AGG | - | chr8_3:11198181-11198200 | Msa1276510:intron | 30.0% | |
| ATAATATGGTGCATAATGTC+AGG | + | chr8_3:11198551-11198570 | None:intergenic | 30.0% | |
| TCATTTGTCTACATATTTGC+AGG | - | chr8_3:11198596-11198615 | Msa1276510:CDS | 30.0% | |
| GATGATATCCATGACATTTA+TGG | - | chr8_3:11198634-11198653 | Msa1276510:CDS | 30.0% | |
| TGTTCGAATTTGTACTTCAA+GGG | + | chr8_3:11198906-11198925 | None:intergenic | 30.0% | |
| TTGTTCGAATTTGTACTTCA+AGG | + | chr8_3:11198907-11198926 | None:intergenic | 30.0% | |
| TCAATCATGATAACAAACAC+AGG | + | chr8_3:11199181-11199200 | None:intergenic | 30.0% | |
| TATCATGATTGAGAATGACA+AGG | - | chr8_3:11199189-11199208 | Msa1276510:CDS | 30.0% | |
| ACAGGAAACTGTTAAATTAG+GGG | - | chr8_3:11199371-11199390 | Msa1276510:CDS | 30.0% | |
| TTATACACTTCATGAAACCA+AGG | + | chr8_3:11199451-11199470 | None:intergenic | 30.0% | |
| CTGAATTTCTTCCCTATATT+CGG | + | chr8_3:11199745-11199764 | None:intergenic | 30.0% | |
| GGAATGAATAAGGAACAAGA+AGG | + | chr8_3:11195943-11195962 | None:intergenic | 35.0% | |
| ! | GGGATTCTGGAAAAATATGA+AGG | + | chr8_3:11196068-11196087 | None:intergenic | 35.0% |
| ! | TAGGGTTCTTTTCTTATCCT+CGG | - | chr8_3:11196111-11196130 | Msa1276510:CDS | 35.0% |
| ATATACAAATGAATGTGCCG+AGG | + | chr8_3:11196131-11196150 | None:intergenic | 35.0% | |
| ! | GAAGAAGAAGAAGAAGGTTT+TGG | - | chr8_3:11196312-11196331 | Msa1276510:CDS | 35.0% |
| !!! | AAGAAGGTTTTGGTTTATGG+CGG | - | chr8_3:11196322-11196341 | Msa1276510:CDS | 35.0% |
| !! | CCTTTTACTTCGAGTTTTTC+CGG | - | chr8_3:11196542-11196561 | Msa1276510:intron | 35.0% |
| ! | TGGTGATGAAGATGAATTGA+AGG | - | chr8_3:11196571-11196590 | Msa1276510:intron | 35.0% |
| ! | TTTGGATGATACTTTTGTGG+AGG | - | chr8_3:11196913-11196932 | Msa1276510:CDS | 35.0% |
| ! | TTGGATGATACTTTTGTGGA+GGG | - | chr8_3:11196914-11196933 | Msa1276510:CDS | 35.0% |
| TCCAAACAATGCTGCAAATA+CGG | + | chr8_3:11197179-11197198 | None:intergenic | 35.0% | |
| !! | GAGTTGCTGATTTAGTTGAA+GGG | - | chr8_3:11197321-11197340 | Msa1276510:intron | 35.0% |
| !! | AGTTGCTGATTTAGTTGAAG+GGG | - | chr8_3:11197322-11197341 | Msa1276510:intron | 35.0% |
| !!! | AAGGGGTGAGGAATTTTTTT+CGG | - | chr8_3:11197339-11197358 | Msa1276510:intron | 35.0% |
| ! | ATTGTGGTTGGCATTTTTGT+AGG | - | chr8_3:11197825-11197844 | Msa1276510:CDS | 35.0% |
| GCTTCAAGAATCTAACTGAT+TGG | - | chr8_3:11197912-11197931 | Msa1276510:CDS | 35.0% | |
| !! | ACTGATTGGTATGCTATTTC+AGG | - | chr8_3:11197926-11197945 | Msa1276510:CDS | 35.0% |
| AAGAGCTGTCCTCATTAAAT+TGG | - | chr8_3:11198055-11198074 | Msa1276510:intron | 35.0% | |
| ATCGATCAGCCAATTTAATG+AGG | + | chr8_3:11198067-11198086 | None:intergenic | 35.0% | |
| ! | TTTGGAGATTTTTGCACCTT+TGG | - | chr8_3:11198151-11198170 | Msa1276510:intron | 35.0% |
| ATTAGCTATTCCTAATCGGT+TGG | + | chr8_3:11198177-11198196 | None:intergenic | 35.0% | |
| ACCGATTAGGAATAGCTAAT+TGG | - | chr8_3:11198177-11198196 | Msa1276510:intron | 35.0% | |
| ! | CTTATCATGTCATTTCTGGA+CGG | - | chr8_3:11198348-11198367 | Msa1276510:intron | 35.0% |
| TTACCTTTCCCTCTTTCATT+TGG | - | chr8_3:11198416-11198435 | Msa1276510:intron | 35.0% | |
| ACAACATACCCATTGAACTT+GGG | + | chr8_3:11198766-11198785 | None:intergenic | 35.0% | |
| TACAACATACCCATTGAACT+TGG | + | chr8_3:11198767-11198786 | None:intergenic | 35.0% | |
| GGTATGTTGTAGCTCAATAA+TGG | - | chr8_3:11198776-11198795 | Msa1276510:intron | 35.0% | |
| GTTCGAATTTGTACTTCAAG+GGG | + | chr8_3:11198905-11198924 | None:intergenic | 35.0% | |
| ATGCATTTGCAAGCAGAATT+TGG | - | chr8_3:11198932-11198951 | Msa1276510:CDS | 35.0% | |
| TTCTTCATATGTGCTTCAGA+TGG | - | chr8_3:11198997-11199016 | Msa1276510:CDS | 35.0% | |
| AGTAAAGATTCCACTTCTGT+TGG | - | chr8_3:11199064-11199083 | Msa1276510:CDS | 35.0% | |
| CAATCAGGCTTGTAAGAATA+TGG | + | chr8_3:11199145-11199164 | None:intergenic | 35.0% | |
| TATTCTTACAAGCCTGATTG+CGG | - | chr8_3:11199145-11199164 | Msa1276510:CDS | 35.0% | |
| ACTATCATTCTGTCTGATTC+TGG | - | chr8_3:11199500-11199519 | Msa1276510:CDS | 35.0% | |
| TCGAGTTTGCACAAAATTCT+TGG | + | chr8_3:11199542-11199561 | None:intergenic | 35.0% | |
| !! | AGTACTAGATTTGTTGGAGA+GGG | - | chr8_3:11199563-11199582 | Msa1276510:exon | 35.0% |
| TTGCAATTTGGATCACTTAC+AGG | + | chr8_3:11199666-11199685 | None:intergenic | 35.0% | |
| ! | TCCAAATTGCAAGTTGAAGA+TGG | - | chr8_3:11199674-11199693 | Msa1276510:five_prime_UTR | 35.0% |
| ! | CCAAATTGCAAGTTGAAGAT+GGG | - | chr8_3:11199675-11199694 | Msa1276510:five_prime_UTR | 35.0% |
| ACAAGTATCTGACCGAATAT+AGG | - | chr8_3:11199730-11199749 | Msa1276510:five_prime_UTR | 35.0% | |
| CAAGTATCTGACCGAATATA+GGG | - | chr8_3:11199731-11199750 | Msa1276510:five_prime_UTR | 35.0% | |
| GCTGTGACTAAATCAAATGT+TGG | + | chr8_3:11199873-11199892 | None:intergenic | 35.0% | |
| ! | TGAAAAGACGGGTTTAACCT+TGG | + | chr8_3:11195911-11195930 | None:intergenic | 40.0% |
| !! | GTGTTTGTTTTCATCTCCGA+CGG | - | chr8_3:11196502-11196521 | Msa1276510:intron | 40.0% |
| CCGGAAAAACTCGAAGTAAA+AGG | + | chr8_3:11196545-11196564 | None:intergenic | 40.0% | |
| !! | TTTACTTCGAGTTTTTCCGG+TGG | - | chr8_3:11196545-11196564 | Msa1276510:intron | 40.0% |
| ! | TCATTTTCACCGACGAAGTT+TGG | - | chr8_3:11196617-11196636 | Msa1276510:intron | 40.0% |
| GAGAGATCATAGTCCAGTTT+CGG | - | chr8_3:11196652-11196671 | Msa1276510:intron | 40.0% | |
| ATGCTACTACTACACGAAAC+AGG | + | chr8_3:11196689-11196708 | None:intergenic | 40.0% | |
| TGTTTCGTGTAGTAGTAGCA+TGG | - | chr8_3:11196688-11196707 | Msa1276510:intron | 40.0% | |
| GTTTCGTGTAGTAGTAGCAT+GGG | - | chr8_3:11196689-11196708 | Msa1276510:intron | 40.0% | |
| ! | TGCTTTGGGTTCTTCTTGTT+TGG | - | chr8_3:11196790-11196809 | Msa1276510:CDS | 40.0% |
| ! | TCTACTGGTGTTAGATTACG+CGG | - | chr8_3:11196821-11196840 | Msa1276510:CDS | 40.0% |
| AGCTTTCTCAGCTTCACAAA+AGG | + | chr8_3:11197035-11197054 | None:intergenic | 40.0% | |
| TCCGTATTTGCAGCATTGTT+TGG | - | chr8_3:11197175-11197194 | Msa1276510:CDS | 40.0% | |
| TTTGGAAACTGCTGTGTTGT+TGG | - | chr8_3:11197193-11197212 | Msa1276510:CDS | 40.0% | |
| AATTCAACAGTAGTTGCTGC+TGG | - | chr8_3:11197230-11197249 | Msa1276510:CDS | 40.0% | |
| ATTCAACAGTAGTTGCTGCT+GGG | - | chr8_3:11197231-11197250 | Msa1276510:CDS | 40.0% | |
| !! | GGAGTTGCTGATTTAGTTGA+AGG | - | chr8_3:11197320-11197339 | Msa1276510:intron | 40.0% |
| GATGTCTTCCACCAATTGTT+CGG | - | chr8_3:11197525-11197544 | Msa1276510:CDS | 40.0% | |
| ATGTCTTCCACCAATTGTTC+GGG | - | chr8_3:11197526-11197545 | Msa1276510:CDS | 40.0% | |
| TTGCAAGGAACATTGTATGC+AGG | + | chr8_3:11198025-11198044 | None:intergenic | 40.0% | |
| GCATACAATGTTCCTTGCAA+TGG | - | chr8_3:11198025-11198044 | Msa1276510:intron | 40.0% | |
| GATGACACTAGATGCATTAC+CGG | - | chr8_3:11198097-11198116 | Msa1276510:intron | 40.0% | |
| GAGGTTTGCAAAGGAAACTT+TGG | - | chr8_3:11198133-11198152 | Msa1276510:intron | 40.0% | |
| AAAGCTCTTTGTGCTGTACA+GGG | + | chr8_3:11198241-11198260 | None:intergenic | 40.0% | |
| CATCCAAATGAAAGAGGGAA+AGG | + | chr8_3:11198422-11198441 | None:intergenic | 40.0% | |
| CTTTCCCTCTTTCATTTGGA+TGG | - | chr8_3:11198420-11198439 | Msa1276510:intron | 40.0% | |
| GTGACCATCCAAATGAAAGA+GGG | + | chr8_3:11198427-11198446 | None:intergenic | 40.0% | |
| AGTGACCATCCAAATGAAAG+AGG | + | chr8_3:11198428-11198447 | None:intergenic | 40.0% | |
| AAGCCTTAGAAGTTGTTCAC+CGG | - | chr8_3:11198695-11198714 | Msa1276510:CDS | 40.0% | |
| TAACCGGTGAACAACTTCTA+AGG | + | chr8_3:11198701-11198720 | None:intergenic | 40.0% | |
| ! | TAGAAGTTGTTCACCGGTTA+TGG | - | chr8_3:11198701-11198720 | Msa1276510:CDS | 40.0% |
| ATACATTGCCCCAAGTTCAA+TGG | - | chr8_3:11198754-11198773 | Msa1276510:intron | 40.0% | |
| TACATTGCCCCAAGTTCAAT+GGG | - | chr8_3:11198755-11198774 | Msa1276510:intron | 40.0% | |
| CAACATACCCATTGAACTTG+GGG | + | chr8_3:11198765-11198784 | None:intergenic | 40.0% | |
| TTATCAATCTCTGCACACTG+TGG | - | chr8_3:11198859-11198878 | Msa1276510:CDS | 40.0% | |
| AATTTGGATTCGCTGCTCAT+TGG | - | chr8_3:11198948-11198967 | Msa1276510:CDS | 40.0% | |
| ATCGACAAATCCAACAGAAG+TGG | + | chr8_3:11199077-11199096 | None:intergenic | 40.0% | |
| GACAGTTATCAGCATGAGAA+GGG | + | chr8_3:11199123-11199142 | None:intergenic | 40.0% | |
| ATTCTTACAAGCCTGATTGC+GGG | - | chr8_3:11199146-11199165 | Msa1276510:CDS | 40.0% | |
| CTCGACAGTACTAGATTTGT+TGG | - | chr8_3:11199557-11199576 | Msa1276510:exon | 40.0% | |
| !! | CAGTACTAGATTTGTTGGAG+AGG | - | chr8_3:11199562-11199581 | Msa1276510:exon | 40.0% |
| ! | GCTGTAGGTTGACAACATAT+AGG | - | chr8_3:11199598-11199617 | Msa1276510:five_prime_UTR | 40.0% |
| AACATATAGGTTCCCTCTGA+AGG | - | chr8_3:11199611-11199630 | Msa1276510:five_prime_UTR | 40.0% | |
| CCCATCTTCAACTTGCAATT+TGG | + | chr8_3:11199678-11199697 | None:intergenic | 40.0% | |
| TATTCGGTCAGATACTTGTC+AGG | + | chr8_3:11199729-11199748 | None:intergenic | 40.0% | |
| ATTCAGCGAATGTATGATCG+CGG | - | chr8_3:11199759-11199778 | Msa1276510:five_prime_UTR | 40.0% | |
| GAATAAGGAACAAGAAGGGG+AGG | + | chr8_3:11195938-11195957 | None:intergenic | 45.0% | |
| GGTGTAGAACACACACTACT+CGG | + | chr8_3:11196377-11196396 | None:intergenic | 45.0% | |
| AGGATCTAGATCTTCGTCAC+CGG | - | chr8_3:11196424-11196443 | Msa1276510:intron | 45.0% | |
| !! | TTTGTTTTCATCTCCGACGG+TGG | - | chr8_3:11196505-11196524 | Msa1276510:intron | 45.0% |
| ! | TTTTCACCGACGAAGTTTGG+TGG | - | chr8_3:11196620-11196639 | Msa1276510:intron | 45.0% |
| CAAGATCCACCAAACTTCGT+CGG | + | chr8_3:11196629-11196648 | None:intergenic | 45.0% | |
| GGACACTGAAAAACCGAAAC+TGG | + | chr8_3:11196668-11196687 | None:intergenic | 45.0% | |
| GTACCGGAACAATTCGATCA+GGG | - | chr8_3:11196723-11196742 | Msa1276510:CDS | 45.0% | |
| !!! | ACTGGTGGTGGGTTTTTTGA+TGG | - | chr8_3:11196755-11196774 | Msa1276510:CDS | 45.0% |
| !!! | CTGGTGGTGGGTTTTTTGAT+GGG | - | chr8_3:11196756-11196775 | Msa1276510:CDS | 45.0% |
| !! | TGGGTTTGTGAGAAGTGCTT+TGG | - | chr8_3:11196775-11196794 | Msa1276510:CDS | 45.0% |
| !! | GGGTTTGTGAGAAGTGCTTT+GGG | - | chr8_3:11196776-11196795 | Msa1276510:CDS | 45.0% |
| !! | GGTGGTGAATTTGATGGTGT+TGG | - | chr8_3:11196854-11196873 | Msa1276510:CDS | 45.0% |
| !! | GGTGAATTTGATGGTGTTGG+TGG | - | chr8_3:11196857-11196876 | Msa1276510:CDS | 45.0% |
| !! | TGGTGGTGATTCTGGAATTG+TGG | - | chr8_3:11196874-11196893 | Msa1276510:CDS | 45.0% |
| ! | ACTTTTGTGGAGGGTTGTGT+TGG | - | chr8_3:11196923-11196942 | Msa1276510:CDS | 45.0% |
| GAAGCTGAGAAAGCTCATAG+AGG | - | chr8_3:11197040-11197059 | Msa1276510:intron | 45.0% | |
| TGAGAAAGCTCATAGAGGAC+AGG | - | chr8_3:11197045-11197064 | Msa1276510:intron | 45.0% | |
| TGTTTGTAGATGCGAGCTAG+TGG | - | chr8_3:11197149-11197168 | Msa1276510:CDS | 45.0% | |
| !! | GCTGTGTTGTTGGCTTTGAT+CGG | - | chr8_3:11197203-11197222 | Msa1276510:CDS | 45.0% |
| ! | ATATACGGGATGTTTGGAGC+TGG | - | chr8_3:11197299-11197318 | Msa1276510:intron | 45.0% |
| CTGATTTAGTTGAAGGGGTG+AGG | - | chr8_3:11197327-11197346 | Msa1276510:intron | 45.0% | |
| TGTCTTCCACCAATTGTTCG+GGG | - | chr8_3:11197527-11197546 | Msa1276510:CDS | 45.0% | |
| AGAGATGTACCCCGAACAAT+TGG | + | chr8_3:11197539-11197558 | None:intergenic | 45.0% | |
| AATTGTTCGGGGTACATCTC+TGG | - | chr8_3:11197538-11197557 | Msa1276510:CDS | 45.0% | |
| ACTGAGTCACTTAAGCAAGC+TGG | - | chr8_3:11197956-11197975 | Msa1276510:intron | 45.0% | |
| CAAGGAACATTGTATGCAGG+CGG | + | chr8_3:11198022-11198041 | None:intergenic | 45.0% | |
| ! | ATTCCTAATCGGTTGGCCAA+AGG | + | chr8_3:11198170-11198189 | None:intergenic | 45.0% |
| GAAAGCTCTTTGTGCTGTAC+AGG | + | chr8_3:11198242-11198261 | None:intergenic | 45.0% | |
| AGAGCTTTCGTCAAAGCTTG+TGG | - | chr8_3:11198253-11198272 | Msa1276510:intron | 45.0% | |
| GAGCAAGCACTCAAAGATGA+AGG | - | chr8_3:11198320-11198339 | Msa1276510:intron | 45.0% | |
| GCTGCGCTTGATTGTTGATA+AGG | - | chr8_3:11198657-11198676 | Msa1276510:CDS | 45.0% | |
| ! | GCGCTTGATTGTTGATAAGG+AGG | - | chr8_3:11198660-11198679 | Msa1276510:CDS | 45.0% |
| ATGTGCTTCAGATGGTTGAG+TGG | - | chr8_3:11199005-11199024 | Msa1276510:CDS | 45.0% | |
| TGTGCTTCAGATGGTTGAGT+GGG | - | chr8_3:11199006-11199025 | Msa1276510:CDS | 45.0% | |
| GGACAGTTATCAGCATGAGA+AGG | + | chr8_3:11199124-11199143 | None:intergenic | 45.0% | |
| ATCTCAAACCAAACAGGCCT+TGG | - | chr8_3:11199431-11199450 | Msa1276510:CDS | 45.0% | |
| TCATGAAACCAAGGCCTGTT+TGG | + | chr8_3:11199442-11199461 | None:intergenic | 45.0% | |
| !! | CTAGATTTGTTGGAGAGGGT+CGG | - | chr8_3:11199567-11199586 | Msa1276510:exon | 45.0% |
| !! | TAGATTTGTTGGAGAGGGTC+GGG | - | chr8_3:11199568-11199587 | Msa1276510:exon | 45.0% |
| ! | TCCCTCTGAAGGAAGAATTG+AGG | - | chr8_3:11199622-11199641 | Msa1276510:five_prime_UTR | 45.0% |
| GCCTCAATTCTTCCTTCAGA+GGG | + | chr8_3:11199626-11199645 | None:intergenic | 45.0% | |
| ACAGGCTTGTGATTCAGTCT+TGG | + | chr8_3:11199648-11199667 | None:intergenic | 45.0% | |
| AGATACTTGTCAGGTATGGC+TGG | + | chr8_3:11199720-11199739 | None:intergenic | 45.0% | |
| GGTCAGATACTTGTCAGGTA+TGG | + | chr8_3:11199724-11199743 | None:intergenic | 45.0% | |
| TTCAGCGAATGTATGATCGC+GGG | - | chr8_3:11199760-11199779 | Msa1276510:five_prime_UTR | 45.0% | |
| GGGCTAACTGTATCAAGCAT+GGG | - | chr8_3:11199780-11199799 | Msa1276510:five_prime_UTR | 45.0% | |
| ! | AGGGGAGGAGTGTGAAAAGA+CGG | + | chr8_3:11195923-11195942 | None:intergenic | 50.0% |
| GTAGAACACACACTACTCGG+TGG | + | chr8_3:11196374-11196393 | None:intergenic | 50.0% | |
| TACGTCTGGGAAATCGGTGA+TGG | - | chr8_3:11196469-11196488 | Msa1276510:intron | 50.0% | |
| ACGTCTGGGAAATCGGTGAT+GGG | - | chr8_3:11196470-11196489 | Msa1276510:intron | 50.0% | |
| !! | ACTTCGAGTTTTTCCGGTGG+TGG | - | chr8_3:11196548-11196567 | Msa1276510:intron | 50.0% |
| ATCTTCATCACCACCACCAC+CGG | + | chr8_3:11196564-11196583 | None:intergenic | 50.0% | |
| ! | CGACGAAGTTTGGTGGATCT+TGG | - | chr8_3:11196627-11196646 | Msa1276510:intron | 50.0% |
| TGTAGTAGTAGCATGGGTGC+CGG | - | chr8_3:11196695-11196714 | Msa1276510:intron | 50.0% | |
| ! | GGTACCGGAACAATTCGATC+AGG | - | chr8_3:11196722-11196741 | Msa1276510:CDS | 50.0% |
| CCTCCCTGATCGAATTGTTC+CGG | + | chr8_3:11196729-11196748 | None:intergenic | 50.0% | |
| CGGAACAATTCGATCAGGGA+GGG | - | chr8_3:11196727-11196746 | Msa1276510:CDS | 50.0% | |
| GGAACAATTCGATCAGGGAG+GGG | - | chr8_3:11196728-11196747 | Msa1276510:CDS | 50.0% | |
| ! | ACTGGTGTTAGATTACGCGG+TGG | - | chr8_3:11196824-11196843 | Msa1276510:CDS | 50.0% |
| !! | GGTGGTGGTGGTGAATTTGA+TGG | - | chr8_3:11196848-11196867 | Msa1276510:CDS | 50.0% |
| !! | GATGGTGTTGGTGGTGATTC+TGG | - | chr8_3:11196866-11196885 | Msa1276510:CDS | 50.0% |
| GATGTACCCCGAACAATTGG+TGG | + | chr8_3:11197536-11197555 | None:intergenic | 50.0% | |
| CTCTTGCATCTGCCATTGCA+AGG | + | chr8_3:11198040-11198059 | None:intergenic | 50.0% | |
| CTTTGCAAACCTCTGCTGCT+TGG | + | chr8_3:11198126-11198145 | None:intergenic | 50.0% | |
| CAAGCAGCAGAGGTTTGCAA+AGG | - | chr8_3:11198124-11198143 | Msa1276510:intron | 50.0% | |
| AGCGCAGCCCATAAATGTCA+TGG | + | chr8_3:11198645-11198664 | None:intergenic | 50.0% | |
| ! | TGTTCACCGGTTATGGTCTG+AGG | - | chr8_3:11198708-11198727 | Msa1276510:CDS | 50.0% |
| CATGCACCTCAGACCATAAC+CGG | + | chr8_3:11198717-11198736 | None:intergenic | 50.0% | |
| ! | GGTTATGGTCTGAGGTGCAT+GGG | - | chr8_3:11198716-11198735 | Msa1276510:CDS | 50.0% |
| ATCTCTGCACACTGTGGTGA+TGG | - | chr8_3:11198865-11198884 | Msa1276510:CDS | 50.0% | |
| TCTCTGCACACTGTGGTGAT+GGG | - | chr8_3:11198866-11198885 | Msa1276510:CDS | 50.0% | |
| TTGGATTCGCTGCTCATTGG+AGG | - | chr8_3:11198951-11198970 | Msa1276510:CDS | 50.0% | |
| TGAGAAGGGAACTTGCAAGG+TGG | + | chr8_3:11199109-11199128 | None:intergenic | 50.0% | |
| GCATGAGAAGGGAACTTGCA+AGG | + | chr8_3:11199112-11199131 | None:intergenic | 50.0% | |
| GGCCTCAATTCTTCCTTCAG+AGG | + | chr8_3:11199627-11199646 | None:intergenic | 50.0% | |
| CGGGCTAACTGTATCAAGCA+TGG | - | chr8_3:11199779-11199798 | Msa1276510:five_prime_UTR | 50.0% | |
| TACTGCTACTGCAAGCAGCA+TGG | - | chr8_3:11199806-11199825 | Msa1276510:five_prime_UTR | 50.0% | |
| ! | GGGGAGGAGTGTGAAAAGAC+GGG | + | chr8_3:11195922-11195941 | None:intergenic | 55.0% |
| ATCTTCGTCACCGGCGTCTA+CGG | - | chr8_3:11196433-11196452 | Msa1276510:intron | 55.0% | |
| GGCGTCTACGTCTGGGAAAT+CGG | - | chr8_3:11196463-11196482 | Msa1276510:intron | 55.0% | |
| !! | TCTGGGAAATCGGTGATGGG+TGG | - | chr8_3:11196473-11196492 | Msa1276510:intron | 55.0% |
| ! | ACATGCTGCTTCACCACCGT+CGG | + | chr8_3:11196521-11196540 | None:intergenic | 55.0% |
| !! | TCGAGTTTTTCCGGTGGTGG+TGG | - | chr8_3:11196551-11196570 | Msa1276510:intron | 55.0% |
| AATTGTTCCGGTACCCGCAC+CGG | + | chr8_3:11196717-11196736 | None:intergenic | 55.0% | |
| CCGGAACAATTCGATCAGGG+AGG | - | chr8_3:11196726-11196745 | Msa1276510:CDS | 55.0% | |
| GGTGTTAGATTACGCGGTGG+TGG | - | chr8_3:11196827-11196846 | Msa1276510:CDS | 55.0% | |
| ! | GTTAGATTACGCGGTGGTGG+TGG | - | chr8_3:11196830-11196849 | Msa1276510:CDS | 55.0% |
| ! | AACCTCTGCTGCTTGGCAAC+CGG | + | chr8_3:11198119-11198138 | None:intergenic | 55.0% |
| GCACCTTTGGCCAACCGATT+AGG | - | chr8_3:11198164-11198183 | Msa1276510:intron | 55.0% | |
| ! | CGGTTATGGTCTGAGGTGCA+TGG | - | chr8_3:11198715-11198734 | Msa1276510:CDS | 55.0% |
| !! | CACACTGTGGTGATGGGTGA+AGG | - | chr8_3:11198872-11198891 | Msa1276510:CDS | 55.0% |
| !! | TGTGGTGATGGGTGAAGGCA+AGG | - | chr8_3:11198877-11198896 | Msa1276510:CDS | 55.0% |
| ! | CGCTGCTCATTGGAGGTACA+AGG | - | chr8_3:11198958-11198977 | Msa1276510:CDS | 55.0% |
| ! | AGATGGTTGAGTGGGCTCGA+TGG | - | chr8_3:11199014-11199033 | Msa1276510:CDS | 55.0% |
| ! | GATGGTTGAGTGGGCTCGAT+GGG | - | chr8_3:11199015-11199034 | Msa1276510:CDS | 55.0% |
| ACTCATTGCTTCGCACTGCC+AGG | + | chr8_3:11199047-11199066 | None:intergenic | 55.0% | |
| TTACAAGCCTGATTGCGGGC+AGG | - | chr8_3:11199150-11199169 | Msa1276510:CDS | 55.0% | |
| GCTACTGCAAGCAGCATGGT+TGG | - | chr8_3:11199810-11199829 | Msa1276510:five_prime_UTR | 55.0% | |
| !! | TAGTAGCATGGGTGCCGGTG+CGG | - | chr8_3:11196700-11196719 | Msa1276510:CDS | 60.0% |
| ! | CGATCAGGGAGGGGAAGTAC+TGG | - | chr8_3:11196737-11196756 | Msa1276510:CDS | 60.0% |
| !! | TCAGGGAGGGGAAGTACTGG+TGG | - | chr8_3:11196740-11196759 | Msa1276510:CDS | 60.0% |
| !! | GGAGGGGAAGTACTGGTGGT+GGG | - | chr8_3:11196744-11196763 | Msa1276510:CDS | 60.0% |
| !! | AGATTACGCGGTGGTGGTGG+TGG | - | chr8_3:11196833-11196852 | Msa1276510:CDS | 60.0% |
| ! | TACCGGTTGCCAAGCAGCAG+AGG | - | chr8_3:11198114-11198133 | Msa1276510:intron | 60.0% |
| AAGCCTGATTGCGGGCAGGA+TGG | - | chr8_3:11199154-11199173 | Msa1276510:CDS | 60.0% | |
| !! | AGTAGCATGGGTGCCGGTGC+GGG | - | chr8_3:11196701-11196720 | Msa1276510:CDS | 65.0% |
| !! | GGGAGGGGAAGTACTGGTGG+TGG | - | chr8_3:11196743-11196762 | Msa1276510:CDS | 65.0% |
| !! | TTACGCGGTGGTGGTGGTGG+TGG | - | chr8_3:11196836-11196855 | Msa1276510:CDS | 65.0% |
| !! | GGGCTCGATGGGTTGTCACC+TGG | - | chr8_3:11199026-11199045 | Msa1276510:CDS | 65.0% |
| GGTCCATCCTGCCCGCAATC+AGG | + | chr8_3:11199160-11199179 | None:intergenic | 65.0% | |
| GTCACCGGCGTCTACGGCGA+CGG | - | chr8_3:11196439-11196458 | Msa1276510:intron | 70.0% | |
| CGACGGCGGCGTCTACGTCT+GGG | - | chr8_3:11196456-11196475 | Msa1276510:intron | 70.0% | |
| !! | ATGGGTGCCGGTGCGGGTAC+CGG | - | chr8_3:11196707-11196726 | Msa1276510:CDS | 70.0% |
| GGGTCGGGCGAGCAAGCTGT+AGG | - | chr8_3:11199583-11199602 | Msa1276510:five_prime_UTR | 70.0% | |
| ACCGGCGTCTACGGCGACGG+CGG | - | chr8_3:11196442-11196461 | Msa1276510:intron | 75.0% | |
| GCGACGGCGGCGTCTACGTC+TGG | - | chr8_3:11196455-11196474 | Msa1276510:intron | 75.0% | |
| ! | GCCGCCGTCGCCGTAGACGC+CGG | + | chr8_3:11196446-11196465 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 11195886 | 11200022 | 11195886 | ID=Msa1276510;Name=Msa1276510 |
| chr8_3 | mRNA | 11195886 | 11200022 | 11195886 | ID=Msa1276510-mRNA-1;Parent=Msa1276510;Name=Msa1276510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=452|1|1|1|1|1|6|180|732 |
| chr8_3 | exon | 11195886 | 11196377 | 11195886 | ID=Msa1276510-mRNA-1:exon:4600;Parent=Msa1276510-mRNA-1 |
| chr8_3 | exon | 11196698 | 11197049 | 11196698 | ID=Msa1276510-mRNA-1:exon:4599;Parent=Msa1276510-mRNA-1 |
| chr8_3 | exon | 11197132 | 11197290 | 11197132 | ID=Msa1276510-mRNA-1:exon:4598;Parent=Msa1276510-mRNA-1 |
| chr8_3 | exon | 11197500 | 11197960 | 11197500 | ID=Msa1276510-mRNA-1:exon:4597;Parent=Msa1276510-mRNA-1 |
| chr8_3 | exon | 11198565 | 11198750 | 11198565 | ID=Msa1276510-mRNA-1:exon:4596;Parent=Msa1276510-mRNA-1 |
| chr8_3 | exon | 11198842 | 11200022 | 11198842 | ID=Msa1276510-mRNA-1:exon:4595;Parent=Msa1276510-mRNA-1 |
| chr8_3 | five_prime_UTR | 11199571 | 11200022 | 11199571 | ID=Msa1276510-mRNA-1:five_prime_utr;Parent=Msa1276510-mRNA-1 |
| chr8_3 | CDS | 11198842 | 11199570 | 11198842 | ID=Msa1276510-mRNA-1:cds;Parent=Msa1276510-mRNA-1 |
| chr8_3 | CDS | 11198565 | 11198750 | 11198565 | ID=Msa1276510-mRNA-1:cds;Parent=Msa1276510-mRNA-1 |
| chr8_3 | CDS | 11197500 | 11197960 | 11197500 | ID=Msa1276510-mRNA-1:cds;Parent=Msa1276510-mRNA-1 |
| chr8_3 | CDS | 11197132 | 11197290 | 11197132 | ID=Msa1276510-mRNA-1:cds;Parent=Msa1276510-mRNA-1 |
| chr8_3 | CDS | 11196698 | 11197049 | 11196698 | ID=Msa1276510-mRNA-1:cds;Parent=Msa1276510-mRNA-1 |
| chr8_3 | CDS | 11196066 | 11196377 | 11196066 | ID=Msa1276510-mRNA-1:cds;Parent=Msa1276510-mRNA-1 |
| chr8_3 | three_prime_UTR | 11195886 | 11196065 | 11195886 | ID=Msa1276510-mRNA-1:three_prime_utr;Parent=Msa1276510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
