Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621750 | KEH17837.1 | 95.570 | 158 | 7 | 0 | 3 | 160 | 63 | 220 | 3.21e-92 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621750 | A0A072TK62 | 95.570 | 158 | 7 | 0 | 3 | 160 | 63 | 220 | 1.53e-92 | 277 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004790 | Msa0621750 | 0.815682 | 8.156482e-52 | -8.615850e-47 |
| Msa0029850 | Msa0621750 | -0.854888 | 9.117841e-62 | -8.615850e-47 |
| Msa0039330 | Msa0621750 | -0.814182 | 1.754728e-51 | -8.615850e-47 |
| Msa0042980 | Msa0621750 | 0.837807 | 4.179555e-57 | -8.615850e-47 |
| Msa0049770 | Msa0621750 | -0.806164 | 9.394023e-50 | -8.615850e-47 |
| Msa0051460 | Msa0621750 | -0.813037 | 3.134134e-51 | -8.615850e-47 |
| Msa0071910 | Msa0621750 | 0.802675 | 5.014047e-49 | -8.615850e-47 |
| Msa0077180 | Msa0621750 | -0.837718 | 4.406473e-57 | -8.615850e-47 |
| Msa0102120 | Msa0621750 | -0.829945 | 3.873991e-55 | -8.615850e-47 |
| Msa0607540 | Msa0621750 | -0.848985 | 4.323030e-60 | -8.615850e-47 |
| Msa0610590 | Msa0621750 | -0.827301 | 1.687573e-54 | -8.615850e-47 |
| Msa0610890 | Msa0621750 | -0.800297 | 1.539903e-48 | -8.615850e-47 |
| Msa0621750 | Msa0631980 | -0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0621750 | Msa0631990 | -0.823307 | 1.486250e-53 | -8.615850e-47 |
| Msa0621750 | Msa0640380 | -0.832164 | 1.105316e-55 | -8.615850e-47 |
| Msa0621750 | Msa0647830 | -0.825188 | 5.372097e-54 | -8.615850e-47 |
| Msa0621750 | Msa0651190 | -0.830214 | 3.331428e-55 | -8.615850e-47 |
| Msa0621750 | Msa0658570 | -0.814184 | 1.753604e-51 | -8.615850e-47 |
| Msa0621750 | Msa0670660 | -0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0621750 | Msa0678820 | -0.856204 | 3.768738e-62 | -8.615850e-47 |
| Msa0621750 | Msa0690440 | -0.831068 | 2.057878e-55 | -8.615850e-47 |
| Msa0621750 | Msa0724560 | -0.812066 | 5.110074e-51 | -8.615850e-47 |
| Msa0621750 | Msa0744170 | 0.811007 | 8.681819e-51 | -8.615850e-47 |
| Msa0621750 | Msa0756310 | -0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0621750 | Msa0788070 | 0.826876 | 2.132178e-54 | -8.615850e-47 |
| Msa0621750 | Msa0801740 | -0.804554 | 2.043447e-49 | -8.615850e-47 |
| Msa0621750 | Msa0803590 | -0.804681 | 1.922253e-49 | -8.615850e-47 |
| Msa0621750 | Msa0807030 | -0.835728 | 1.417206e-56 | -8.615850e-47 |
| Msa0621750 | Msa0830420 | -0.802166 | 6.382488e-49 | -8.615850e-47 |
| Msa0621750 | Msa0832970 | -0.825041 | 5.818882e-54 | -8.615850e-47 |
| Msa0621750 | Msa0835730 | -0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa0621750 | Msa0843250 | -0.800959 | 1.128162e-48 | -8.615850e-47 |
| Msa0621750 | Msa0844900 | -0.816444 | 5.511541e-52 | -8.615850e-47 |
| Msa0621750 | Msa0845000 | -0.800655 | 1.301464e-48 | -8.615850e-47 |
| Msa0621750 | Msa0846810 | -0.822244 | 2.627300e-53 | -8.615850e-47 |
| Msa0621750 | Msa0848900 | -0.808314 | 3.290837e-50 | -8.615850e-47 |
| Msa0621750 | Msa0864470 | 0.838876 | 2.216034e-57 | -8.615850e-47 |
| Msa0621750 | Msa0876850 | 0.883926 | 2.966370e-71 | -8.615850e-47 |
| Msa0621750 | Msa0886330 | 0.833232 | 6.003900e-56 | -8.615850e-47 |
| Msa0621750 | Msa0891600 | 0.803303 | 3.717755e-49 | -8.615850e-47 |
| Msa0621750 | Msa0896760 | -0.803283 | 3.753647e-49 | -8.615850e-47 |
| Msa0621750 | Msa0910980 | 0.834065 | 3.716941e-56 | -8.615850e-47 |
| Msa0621750 | Msa0913480 | 0.810493 | 1.121396e-50 | -8.615850e-47 |
| Msa0621750 | Msa0927670 | -0.805325 | 1.409719e-49 | -8.615850e-47 |
| Msa0621750 | Msa0942080 | 0.866848 | 2.112233e-65 | -8.615850e-47 |
| Msa0621750 | Msa0946690 | 0.836685 | 8.097691e-57 | -8.615850e-47 |
| Msa0621750 | Msa0982270 | -0.847353 | 1.220545e-59 | -8.615850e-47 |
| Msa0621750 | Msa0992490 | 0.840156 | 1.030271e-57 | -8.615850e-47 |
| Msa0621750 | Msa1006850 | -0.817117 | 3.893631e-52 | -8.615850e-47 |
| Msa0621750 | Msa1019840 | 0.811816 | 5.794627e-51 | -8.615850e-47 |
| Msa0621750 | Msa1021340 | -0.801289 | 9.659249e-49 | -8.615850e-47 |
| Msa0621750 | Msa1041600 | 0.851759 | 7.197075e-61 | -8.615850e-47 |
| Msa0621750 | Msa1054410 | -0.851919 | 6.483126e-61 | -8.615850e-47 |
| Msa0621750 | Msa1068200 | 0.842004 | 3.369811e-58 | -8.615850e-47 |
| Msa0621750 | Msa1070850 | -0.801097 | 1.057601e-48 | -8.615850e-47 |
| Msa0621750 | Msa1073070 | 0.817236 | 3.660717e-52 | -8.615850e-47 |
| Msa0621750 | Msa1075080 | 0.866537 | 2.652835e-65 | -8.615850e-47 |
| Msa0621750 | Msa1075220 | 0.852917 | 3.369963e-61 | -8.615850e-47 |
| Msa0621750 | Msa1079730 | 0.818874 | 1.560843e-52 | -8.615850e-47 |
| Msa0621750 | Msa1080790 | -0.805607 | 1.230489e-49 | -8.615850e-47 |
| Msa0621750 | Msa1090260 | -0.832642 | 8.414946e-56 | -8.615850e-47 |
| Msa0621750 | Msa1092090 | -0.809398 | 1.929943e-50 | -8.615850e-47 |
| Msa0621750 | Msa1100480 | -0.811119 | 8.210067e-51 | -8.615850e-47 |
| Msa0621750 | Msa1116130 | 0.845854 | 3.132339e-59 | -8.615850e-47 |
| Msa0621750 | Msa1118930 | -0.802900 | 4.504455e-49 | -8.615850e-47 |
| Msa0621750 | Msa1124540 | 0.872413 | 3.241311e-67 | -8.615850e-47 |
| Msa0621750 | Msa1131940 | 0.811511 | 6.750117e-51 | -8.615850e-47 |
| Msa0621750 | Msa1132950 | -0.812850 | 3.445434e-51 | -8.615850e-47 |
| Msa0621750 | Msa1132970 | -0.815158 | 1.066736e-51 | -8.615850e-47 |
| Msa0621750 | Msa1139000 | 0.837356 | 5.454606e-57 | -8.615850e-47 |
| Msa0621750 | Msa1144720 | 0.831312 | 1.792651e-55 | -8.615850e-47 |
| Msa0621750 | Msa1148720 | -0.806097 | 9.706671e-50 | -8.615850e-47 |
| Msa0621750 | Msa1155350 | -0.801535 | 8.602028e-49 | -8.615850e-47 |
| Msa0621750 | Msa1156340 | 0.838640 | 2.550903e-57 | -8.615850e-47 |
| Msa0621750 | Msa1158670 | -0.833131 | 6.361071e-56 | -8.615850e-47 |
| Msa0621750 | Msa1162550 | 0.845806 | 3.227503e-59 | -8.615850e-47 |
| Msa0621750 | Msa1163590 | 0.819100 | 1.386346e-52 | -8.615850e-47 |
| Msa0621750 | Msa1166500 | 0.852987 | 3.217019e-61 | -8.615850e-47 |
| Msa0621750 | Msa1168040 | 0.825385 | 4.824587e-54 | -8.615850e-47 |
| Msa0621750 | Msa1174310 | -0.806928 | 6.482637e-50 | -8.615850e-47 |
| Msa0621750 | Msa1183100 | 0.850466 | 1.667652e-60 | -8.615850e-47 |
| Msa0621750 | Msa1202770 | 0.844097 | 9.335762e-59 | -8.615850e-47 |
| Msa0621750 | Msa1205130 | -0.808804 | 2.586449e-50 | -8.615850e-47 |
| Msa0621750 | Msa1207380 | -0.801701 | 7.951239e-49 | -8.615850e-47 |
| Msa0621750 | Msa1208180 | -0.804499 | 2.097897e-49 | -8.615850e-47 |
| Msa0621750 | Msa1217810 | -0.805056 | 1.604894e-49 | -8.615850e-47 |
| Msa0621750 | Msa1224580 | 0.804695 | 1.909543e-49 | -8.615850e-47 |
| Msa0621750 | Msa1225730 | 0.858239 | 9.440837e-63 | -8.615850e-47 |
| Msa0621750 | Msa1230830 | -0.827609 | 1.423158e-54 | -8.615850e-47 |
| Msa0621750 | Msa1233500 | -0.811899 | 5.556900e-51 | -8.615850e-47 |
| Msa0621750 | Msa1235400 | -0.803848 | 2.865324e-49 | -8.615850e-47 |
| Msa0621750 | Msa1246500 | -0.812305 | 4.532148e-51 | -8.615850e-47 |
| Msa0621750 | Msa1252070 | -0.801049 | 1.081727e-48 | -8.615850e-47 |
| Msa0621750 | Msa1257600 | -0.807274 | 5.475322e-50 | -8.615850e-47 |
| Msa0621750 | Msa1258380 | 0.888241 | 7.030643e-73 | -8.615850e-47 |
| Msa0621750 | Msa1265340 | 0.807472 | 4.971705e-50 | -8.615850e-47 |
| Msa0621750 | Msa1276510 | -0.818448 | 1.949914e-52 | -8.615850e-47 |
| Msa0621750 | Msa1287480 | -0.800313 | 1.528534e-48 | -8.615850e-47 |
| Msa0621750 | Msa1295540 | 0.839880 | 1.215839e-57 | -8.615850e-47 |
| Msa0621750 | Msa1307740 | -0.843936 | 1.031125e-58 | -8.615850e-47 |
| Msa0621750 | Msa1314770 | -0.811273 | 7.603196e-51 | -8.615850e-47 |
| Msa0621750 | Msa1316560 | 0.845253 | 4.557288e-59 | -8.615850e-47 |
| Msa0621750 | Msa1322190 | -0.817765 | 2.782230e-52 | -8.615850e-47 |
| Msa0621750 | Msa1359650 | 0.801570 | 8.460016e-49 | -8.615850e-47 |
| Msa0621750 | Msa1364330 | 0.826580 | 2.508888e-54 | -8.615850e-47 |
| Msa0621750 | Msa1376160 | 0.812429 | 4.258586e-51 | -8.615850e-47 |
| Msa0621750 | Msa1376890 | -0.815744 | 7.902231e-52 | -8.615850e-47 |
| Msa0621750 | Msa1378230 | -0.826501 | 2.620600e-54 | -8.615850e-47 |
| Msa0621750 | Msa1382160 | -0.804618 | 1.981360e-49 | -8.615850e-47 |
| Msa0621750 | Msa1393040 | -0.807715 | 4.414679e-50 | -8.615850e-47 |
| Msa0621750 | Msa1404240 | 0.836991 | 6.763538e-57 | -8.615850e-47 |
| Msa0621750 | Msa1416140 | 0.815617 | 8.435143e-52 | -8.615850e-47 |
| Msa0621750 | Msa1437680 | -0.800066 | 1.715441e-48 | -8.615850e-47 |
| Msa0621750 | Msa1444250 | 0.883845 | 3.176647e-71 | -8.615850e-47 |
| Msa0621750 | Msa1444740 | -0.817278 | 3.582747e-52 | -8.615850e-47 |
| Msa0621750 | Msa1451620 | 0.869135 | 3.884611e-66 | -8.615850e-47 |
| Msa0621750 | Msa1454860 | -0.814257 | 1.689659e-51 | -8.615850e-47 |
| Msa0621750 | Msa1457670 | 0.812064 | 5.116540e-51 | -8.615850e-47 |
| Msa0621750 | Msa1458550 | -0.826087 | 3.287587e-54 | -8.615850e-47 |
| Msa0621750 | Msa1461810 | 0.853846 | 1.823652e-61 | -8.615850e-47 |
| Msa0621750 | Msa1464940 | -0.831810 | 1.351434e-55 | -8.615850e-47 |
| Msa0125050 | Msa0621750 | -0.832418 | 9.562969e-56 | -8.615850e-47 |
| Msa0169820 | Msa0621750 | -0.845812 | 3.214820e-59 | -8.615850e-47 |
| Msa0178860 | Msa0621750 | 0.836735 | 7.860026e-57 | -8.615850e-47 |
| Msa0183010 | Msa0621750 | 0.818073 | 2.371219e-52 | -8.615850e-47 |
| Msa0199800 | Msa0621750 | 0.805589 | 1.241018e-49 | -8.615850e-47 |
| Msa0222340 | Msa0621750 | -0.805404 | 1.357082e-49 | -8.615850e-47 |
| Msa0223410 | Msa0621750 | 0.803394 | 3.560391e-49 | -8.615850e-47 |
| Msa0230640 | Msa0621750 | 0.836357 | 9.809491e-57 | -8.615850e-47 |
| Msa0365490 | Msa0621750 | -0.804682 | 1.920903e-49 | -8.615850e-47 |
| Msa0376590 | Msa0621750 | -0.805939 | 1.047578e-49 | -8.615850e-47 |
| Msa0377610 | Msa0621750 | 0.807030 | 6.168378e-50 | -8.615850e-47 |
| Msa0379640 | Msa0621750 | -0.819117 | 1.374504e-52 | -8.615850e-47 |
| Msa0381600 | Msa0621750 | 0.844938 | 5.543378e-59 | -8.615850e-47 |
| Msa0383490 | Msa0621750 | 0.819641 | 1.044066e-52 | -8.615850e-47 |
| Msa0388540 | Msa0621750 | 0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0388840 | Msa0621750 | -0.809355 | 1.971623e-50 | -8.615850e-47 |
| Msa0389360 | Msa0621750 | -0.801994 | 6.924222e-49 | -8.615850e-47 |
| Msa0389810 | Msa0621750 | -0.855777 | 5.024436e-62 | -8.615850e-47 |
| Msa0392040 | Msa0621750 | 0.814365 | 1.599062e-51 | -8.615850e-47 |
| Msa0394340 | Msa0621750 | -0.838947 | 2.124365e-57 | -8.615850e-47 |
| Msa0412840 | Msa0621750 | -0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa0426820 | Msa0621750 | 0.801205 | 1.005030e-48 | -8.615850e-47 |
| Msa0433410 | Msa0621750 | 0.824890 | 6.315805e-54 | -8.615850e-47 |
| Msa0438050 | Msa0621750 | -0.829231 | 5.777494e-55 | -8.615850e-47 |
| Msa0442200 | Msa0621750 | -0.821913 | 3.135760e-53 | -8.615850e-47 |
| Msa0442850 | Msa0621750 | -0.806967 | 6.358654e-50 | -8.615850e-47 |
| Msa0449760 | Msa0621750 | -0.830577 | 2.716164e-55 | -8.615850e-47 |
| Msa0458440 | Msa0621750 | -0.826983 | 2.010252e-54 | -8.615850e-47 |
| Msa0465670 | Msa0621750 | 0.824549 | 7.601026e-54 | -8.615850e-47 |
| Msa0465680 | Msa0621750 | 0.826481 | 2.649746e-54 | -8.615850e-47 |
| Msa0467740 | Msa0621750 | 0.824505 | 7.784825e-54 | -8.615850e-47 |
| Msa0468130 | Msa0621750 | -0.841603 | 4.299700e-58 | -8.615850e-47 |
| Msa0469940 | Msa0621750 | 0.847084 | 1.445969e-59 | -8.615850e-47 |
| Msa0472960 | Msa0621750 | 0.837539 | 4.897465e-57 | -8.615850e-47 |
| Msa0475490 | Msa0621750 | -0.823226 | 1.552086e-53 | -8.615850e-47 |
| Msa0477130 | Msa0621750 | 0.830254 | 3.256778e-55 | -8.615850e-47 |
| Msa0482190 | Msa0621750 | 0.887308 | 1.599989e-72 | -8.615850e-47 |
| Msa0260270 | Msa0621750 | 0.823684 | 1.213282e-53 | -8.615850e-47 |
| Msa0260910 | Msa0621750 | -0.803510 | 3.368453e-49 | -8.615850e-47 |
| Msa0292170 | Msa0621750 | -0.809324 | 2.001864e-50 | -8.615850e-47 |
| Msa0306210 | Msa0621750 | 0.835767 | 1.385428e-56 | -8.615850e-47 |
| Msa0315290 | Msa0621750 | -0.828456 | 8.902215e-55 | -8.615850e-47 |
| Msa0344690 | Msa0621750 | 0.834467 | 2.947292e-56 | -8.615850e-47 |
| Msa0347610 | Msa0621750 | -0.814788 | 1.288861e-51 | -8.615850e-47 |
| Msa0485500 | Msa0621750 | 0.888790 | 4.318959e-73 | -8.615850e-47 |
| Msa0489610 | Msa0621750 | -0.824755 | 6.795343e-54 | -8.615850e-47 |
| Msa0514130 | Msa0621750 | 0.822501 | 2.290343e-53 | -8.615850e-47 |
| Msa0526670 | Msa0621750 | 0.805432 | 1.339053e-49 | -8.615850e-47 |
| Msa0532810 | Msa0621750 | 0.840222 | 9.904972e-58 | -8.615850e-47 |
| Msa0536220 | Msa0621750 | -0.807326 | 5.339362e-50 | -8.615850e-47 |
| Msa0543900 | Msa0621750 | -0.848162 | 7.304214e-60 | -8.615850e-47 |
| Msa0553460 | Msa0621750 | -0.832844 | 7.496420e-56 | -8.615850e-47 |
| Msa0564510 | Msa0621750 | -0.809911 | 1.497080e-50 | -8.615850e-47 |
| Msa0568240 | Msa0621750 | -0.803651 | 3.148867e-49 | -8.615850e-47 |
| Msa0578970 | Msa0621750 | -0.834389 | 3.083388e-56 | -8.615850e-47 |
| Msa0599770 | Msa0621750 | -0.847549 | 1.078047e-59 | -8.615850e-47 |
| Msa0599890 | Msa0621750 | -0.829202 | 5.873363e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621750 | MtrunA17_Chr8g0335301 | 95.570 | 158 | 7 | 0 | 3 | 160 | 27 | 184 | 1.04e-95 | 274 |
| Msa0621750 | MtrunA17_Chr2g0322231 | 93.671 | 158 | 10 | 0 | 3 | 160 | 27 | 184 | 1.36e-93 | 269 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621750 | AT1G26750.1 | 47.590 | 166 | 79 | 2 | 3 | 160 | 27 | 192 | 6.68e-41 | 136 |
Find 83 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACCCTTCACGAGCTTTC+TGG | 0.167713 | 4_2:+74000003 | None:intergenic |
| CAAAAGAAACAGACAATAAA+AGG | 0.229649 | 4_2:+73999914 | None:intergenic |
| CGAAAACTTGCATGAAATTC+TGG | 0.274251 | 4_2:+73998036 | None:intergenic |
| GTCTCGATTATTTGCCTTAA+GGG | 0.274503 | 4_2:-73998615 | Msa0621750:CDS |
| CGTCTCGATTATTTGCCTTA+AGG | 0.298656 | 4_2:-73998616 | Msa0621750:CDS |
| AATTCAGTTCGTCACTATAA+AGG | 0.321289 | 4_2:-73998129 | Msa0621750:three_prime_UTR |
| GAGCCAAACGGGTTCGGCCT+TGG | 0.350031 | 4_2:+73999979 | None:intergenic |
| CTTCACAAGTTCACGTATGC+TGG | 0.350600 | 4_2:+73998271 | None:intergenic |
| GGCTTTGAGCCAAACGGGTT+CGG | 0.354407 | 4_2:+73999973 | None:intergenic |
| TGAACAATATATTGAAACTT+TGG | 0.365708 | 4_2:-73998185 | Msa0621750:three_prime_UTR |
| AGGCAATAATTTAAAAGATC+TGG | 0.368912 | 4_2:+73999934 | None:intergenic |
| GAGGCAGTTTCTTCCCTTGA+AGG | 0.376685 | 4_2:+73998369 | None:intergenic |
| AGAGATTCGGACGAGATAAT+TGG | 0.381238 | 4_2:-73998226 | Msa0621750:CDS |
| TGGCCAAGGCCGAACCCGTT+TGG | 0.390787 | 4_2:-73999982 | Msa0621750:five_prime_UTR |
| AAGCAAATTGCGCGCCTTCA+AGG | 0.391379 | 4_2:-73998383 | Msa0621750:CDS |
| ATTCAGTTCGTCACTATAAA+GGG | 0.402073 | 4_2:-73998128 | Msa0621750:three_prime_UTR |
| TCCTTGACAGGACAAGGAAA+TGG | 0.403614 | 4_2:+73998341 | None:intergenic |
| ACAGGACAAGGAAATGGGTT+TGG | 0.408987 | 4_2:+73998347 | None:intergenic |
| GCATTGAAGCAACTAGCAAC+AGG | 0.409834 | 4_2:-74000086 | Msa0621750:five_prime_UTR |
| AAGGCTGACGTCTCGGCGGC+GGG | 0.419018 | 4_2:+74000468 | None:intergenic |
| CAGAAAGCTCGTGAAGGGTT+TGG | 0.425189 | 4_2:-74000002 | Msa0621750:five_prime_UTR |
| TCCATGGCTTTGAGCCAAAC+GGG | 0.441683 | 4_2:+73999968 | None:intergenic |
| TTCCATGGCTTTGAGCCAAA+CGG | 0.442508 | 4_2:+73999967 | None:intergenic |
| GAAGGCTGACGTCTCGGCGG+CGG | 0.444455 | 4_2:+74000467 | None:intergenic |
| TCAGGTCGAGGAAATGTTGC+TGG | 0.451486 | 4_2:+73999522 | None:intergenic |
| CCTTGACAGGACAAGGAAAT+GGG | 0.457468 | 4_2:+73998342 | None:intergenic |
| GGCGCGCAATTTGCTTCAGA+CGG | 0.457766 | 4_2:+73998390 | None:intergenic |
| TTACACAAGACAGCAGCTAT+AGG | 0.472323 | 4_2:+73998001 | None:intergenic |
| GCAAATAATCGAGACGGAGC+AGG | 0.479200 | 4_2:+73998623 | None:intergenic |
| GAAGGAATAGCGATTCAGAT+AGG | 0.480883 | 4_2:+74000547 | None:intergenic |
| GAGGAATCCATGCAGAGATT+CGG | 0.486383 | 4_2:-73998239 | Msa0621750:CDS |
| GGAATATATAGCAGAGAAGA+AGG | 0.491970 | 4_2:-73998432 | Msa0621750:CDS |
| GACCATACTTGATGGGATCA+TGG | 0.497888 | 4_2:+73999421 | None:intergenic |
| GCGGTAATGAACGGAGGAGG+AGG | 0.501565 | 4_2:+74000490 | None:intergenic |
| GGGAACGAAAATCAAAGAAG+TGG | 0.502286 | 4_2:-74000065 | Msa0621750:five_prime_UTR |
| AAACTGCTTGATGAACAAAC+TGG | 0.503959 | 4_2:+73997960 | None:intergenic |
| CGGCGGCGGGCGGTAATGAA+CGG | 0.504275 | 4_2:+74000481 | None:intergenic |
| CTCTTGACATAAACATCCTC+AGG | 0.505090 | 4_2:+73999474 | None:intergenic |
| TCAGCTTGAATCTCCTTGAC+AGG | 0.509220 | 4_2:+73998329 | None:intergenic |
| GTAATGAACGGAGGAGGAGG+AGG | 0.509470 | 4_2:+74000493 | None:intergenic |
| TTCACAAGTTCACGTATGCT+GGG | 0.511010 | 4_2:+73998272 | None:intergenic |
| GGAGGGCGTCGCGGCAGTAA+TGG | 0.517056 | 4_2:+74000445 | None:intergenic |
| ACCCGTTTGGCTCAAAGCCA+TGG | 0.520517 | 4_2:-73999969 | Msa0621750:five_prime_UTR |
| AGCAAATTGCGCGCCTTCAA+GGG | 0.521753 | 4_2:-73998382 | Msa0621750:CDS |
| CCCATTTCCTTGTCCTGTCA+AGG | 0.523193 | 4_2:-73998342 | Msa0621750:CDS |
| CTGAGGATGTTTATGTCAAG+AGG | 0.530196 | 4_2:-73999473 | Msa0621750:CDS |
| TGCTCTCTAGACACAGAGAC+AGG | 0.530785 | 4_2:+74000522 | None:intergenic |
| GGACAAGGAAATGGGTTTGG+AGG | 0.541575 | 4_2:+73998350 | None:intergenic |
| GAATTGTATTATTATTGCAA+AGG | 0.542058 | 4_2:+73998147 | None:intergenic |
| GCGCGCAATTTGCTTCAGAC+GGG | 0.549124 | 4_2:+73998391 | None:intergenic |
| TGCAGTTTACCCTCAGGTCG+AGG | 0.553031 | 4_2:+73999510 | None:intergenic |
| CGGGCGGTAATGAACGGAGG+AGG | 0.553137 | 4_2:+74000487 | None:intergenic |
| TCTGGAGATTAACTGTTCCA+TGG | 0.555092 | 4_2:+73999952 | None:intergenic |
| ATGGTCTGCAGTTTACCCTC+AGG | 0.555199 | 4_2:+73999504 | None:intergenic |
| TGAATCTCCTTGACAGGACA+AGG | 0.555695 | 4_2:+73998335 | None:intergenic |
| ACTTGTGAAGCAAAAGAAAG+AGG | 0.556666 | 4_2:-73998258 | Msa0621750:CDS |
| GCTCGTGAAGGGTTTGGCCA+AGG | 0.562404 | 4_2:-73999996 | Msa0621750:five_prime_UTR |
| GTTCTTGAGTTAAAAGAGCA+TGG | 0.567548 | 4_2:-73998593 | Msa0621750:CDS |
| GGAACAATGTCGTTTATGAA+AGG | 0.570040 | 4_2:-74000043 | Msa0621750:five_prime_UTR |
| GTAATGGAAGGCTGACGTCT+CGG | 0.572717 | 4_2:+74000461 | None:intergenic |
| GAATCAGTACTTACAGCTGG+AGG | 0.574323 | 4_2:+74000427 | None:intergenic |
| TAGACACAGAGACAGGAAGA+AGG | 0.575873 | 4_2:+74000529 | None:intergenic |
| CGATCCAGAAAGCTCGTGAA+GGG | 0.576415 | 4_2:-74000007 | Msa0621750:five_prime_UTR |
| GGCGTCGCGGCAGTAATGGA+AGG | 0.590744 | 4_2:+74000449 | None:intergenic |
| AGCAACATTTCCTCGACCTG+AGG | 0.596750 | 4_2:-73999520 | Msa0621750:CDS |
| TCGATCCAGAAAGCTCGTGA+AGG | 0.601748 | 4_2:-74000008 | Msa0621750:five_prime_UTR |
| GCTGACGTCTCGGCGGCGGG+CGG | 0.601760 | 4_2:+74000471 | None:intergenic |
| AACATCCTCAGGAAAAGTGA+TGG | 0.606185 | 4_2:+73999485 | None:intergenic |
| AGGAGATTCAAGCTGAGGAG+AGG | 0.606513 | 4_2:-73998322 | Msa0621750:CDS |
| CATTAGTGAGGATGAAGCAA+TGG | 0.607618 | 4_2:-73998570 | Msa0621750:CDS |
| ATCTCGTCCGAATCTCTGCA+TGG | 0.619034 | 4_2:+73998232 | None:intergenic |
| GGAACGAAAATCAAAGAAGT+GGG | 0.626131 | 4_2:-74000064 | Msa0621750:five_prime_UTR |
| CATTGAAGCAACTAGCAACA+GGG | 0.634241 | 4_2:-74000085 | Msa0621750:five_prime_UTR |
| TGTCAAGGAGATTCAAGCTG+AGG | 0.645126 | 4_2:-73998327 | Msa0621750:CDS |
| CTTAAGGCAAATAATCGAGA+CGG | 0.649395 | 4_2:+73998617 | None:intergenic |
| AAAAGAGCATGGCATTAGTG+AGG | 0.653951 | 4_2:-73998582 | Msa0621750:CDS |
| CTTACAGCTGGAGGGCGTCG+CGG | 0.656512 | 4_2:+74000436 | None:intergenic |
| AATCAGTACTTACAGCTGGA+GGG | 0.656692 | 4_2:+74000428 | None:intergenic |
| GCAACATTTCCTCGACCTGA+GGG | 0.663029 | 4_2:-73999519 | Msa0621750:CDS |
| CTAGATGGGAGATTCTCAAG+TGG | 0.682494 | 4_2:+73999889 | None:intergenic |
| GGTCGAGGAAATGTTGCTGG+TGG | 0.690452 | 4_2:+73999525 | None:intergenic |
| CGGCGGGCGGTAATGAACGG+AGG | 0.693101 | 4_2:+74000484 | None:intergenic |
| ATGGAAGGCTGACGTCTCGG+CGG | 0.714188 | 4_2:+74000464 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAACAATTTTTAAATGT+GGG | + | chr4_2:73997916-73997935 | None:intergenic | 10.0% |
| !!! | TTATTTATTTTTTTATAAGC+TGG | - | chr4_2:73999701-73999720 | Msa0621750:intron | 10.0% |
| !!! | GTATAAACAATTTTTAAATG+TGG | + | chr4_2:73997917-73997936 | None:intergenic | 15.0% |
| !!! | ACTTTTTAGTTTATTTATTC+AGG | - | chr4_2:73998851-73998870 | Msa0621750:intron | 15.0% |
| !! | ATAAAAACCTAAATAGTATT+AGG | + | chr4_2:74000456-74000475 | None:intergenic | 15.0% |
| !!! | TAATTTTCATAATAGCTCAA+GGG | + | chr4_2:73997959-73997978 | None:intergenic | 20.0% |
| !! | CAAATTGATTAACAAACAAA+AGG | + | chr4_2:73998156-73998175 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTGTTAATCAATT+TGG | - | chr4_2:73998154-73998173 | Msa0621750:three_prime_UTR | 20.0% |
| !! | TCAACTATAAAAATCTAGAT+GGG | + | chr4_2:73998675-73998694 | None:intergenic | 20.0% |
| !! | ATCAACTATAAAAATCTAGA+TGG | + | chr4_2:73998676-73998695 | None:intergenic | 20.0% |
| !! | TTATTTATTCAGGAATTCTT+TGG | - | chr4_2:73998861-73998880 | Msa0621750:intron | 20.0% |
| !! | CAAAAAATGTAACTATTAGA+GGG | + | chr4_2:74000073-74000092 | None:intergenic | 20.0% |
| !! | TGAACAATATATTGAAACTT+TGG | - | chr4_2:74000362-74000381 | Msa0621750:intron | 20.0% |
| !! | GAATTGTATTATTATTGCAA+AGG | + | chr4_2:74000403-74000422 | None:intergenic | 20.0% |
| !! | GTAATTTTCATAATAGCTCA+AGG | + | chr4_2:73997960-73997979 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTGATTAGGGTTA+TGG | + | chr4_2:73998203-73998222 | None:intergenic | 25.0% |
| ! | ATAACCCTAATCAAAACAAA+AGG | - | chr4_2:73998202-73998221 | Msa0621750:three_prime_UTR | 25.0% |
| ! | TAACCCTAATCAAAACAAAA+GGG | - | chr4_2:73998203-73998222 | Msa0621750:three_prime_UTR | 25.0% |
| ! | AGGCAATAATTTAAAAGATC+TGG | + | chr4_2:73998616-73998635 | None:intergenic | 25.0% |
| ! | CAAAAGAAACAGACAATAAA+AGG | + | chr4_2:73998636-73998655 | None:intergenic | 25.0% |
| !! | AAGAACTGTTACTCTTTTTA+TGG | - | chr4_2:73998930-73998949 | Msa0621750:intron | 25.0% |
| ! | CCTTCAAATAAAACGAAAAA+AGG | + | chr4_2:73998956-73998975 | None:intergenic | 25.0% |
| !!! | CCTTTTTTCGTTTTATTTGA+AGG | - | chr4_2:73998953-73998972 | Msa0621750:intron | 25.0% |
| !!! | TTATGAATTTGGCTTGTATA+TGG | - | chr4_2:73999228-73999247 | Msa0621750:intron | 25.0% |
| !!! | TCTAAATTTTGATCCATGAA+TGG | - | chr4_2:73999333-73999352 | Msa0621750:intron | 25.0% |
| !!! | CTAAATTTTGATCCATGAAT+GGG | - | chr4_2:73999334-73999353 | Msa0621750:intron | 25.0% |
| !!! | TAAATTTTGATCCATGAATG+GGG | - | chr4_2:73999335-73999354 | Msa0621750:intron | 25.0% |
| ! | ACAAACATAAAAGTTCTTGA+AGG | + | chr4_2:73999370-73999389 | None:intergenic | 25.0% |
| ! | TTCTTCAATGTTCAATATTG+TGG | - | chr4_2:73999416-73999435 | Msa0621750:intron | 25.0% |
| ! | AAGAATTAACAGATAGCAAA+AGG | + | chr4_2:73999560-73999579 | None:intergenic | 25.0% |
| ! | GAACTATTATGTGATTTACT+TGG | - | chr4_2:73999637-73999656 | Msa0621750:intron | 25.0% |
| !! | TCATAATGTTTAAGTTCAAC+AGG | - | chr4_2:73999886-73999905 | Msa0621750:five_prime_UTR | 25.0% |
| ! | ACATATCCATGAATCAATTT+AGG | + | chr4_2:74000022-74000041 | None:intergenic | 25.0% |
| ! | CATAAAGTAAGAACAAATTC+CGG | + | chr4_2:74000050-74000069 | None:intergenic | 25.0% |
| ! | GCAAAAAATGTAACTATTAG+AGG | + | chr4_2:74000074-74000093 | None:intergenic | 25.0% |
| !! | CTTTTGACCTAATACTATTT+AGG | - | chr4_2:74000446-74000465 | Msa0621750:five_prime_UTR | 25.0% |
| !! | ATCTATGCATCTTTTTATTG+AGG | + | chr4_2:74000635-74000654 | None:intergenic | 25.0% |
| ! | GGGTTGAATAGTAATTTTCA+GGG | + | chr4_2:73997939-73997958 | None:intergenic | 30.0% |
| ! | AGGGTTGAATAGTAATTTTC+AGG | + | chr4_2:73997940-73997959 | None:intergenic | 30.0% |
| GGAAAAAATGAAAGTGACAT+TGG | + | chr4_2:73997982-73998001 | None:intergenic | 30.0% | |
| TATGGAAAAATTGAAGGTGA+AGG | + | chr4_2:73998185-73998204 | None:intergenic | 30.0% | |
| TAGGGTTATGGAAAAATTGA+AGG | + | chr4_2:73998191-73998210 | None:intergenic | 30.0% | |
| !!! | TTGCCCTTTTGTTTTGATTA+GGG | + | chr4_2:73998209-73998228 | None:intergenic | 30.0% |
| !!! | TTTGCCCTTTTGTTTTGATT+AGG | + | chr4_2:73998210-73998229 | None:intergenic | 30.0% |
| AATCAAAACAAAAGGGCAAA+AGG | - | chr4_2:73998210-73998229 | Msa0621750:exon | 30.0% | |
| ATCAAAACAAAAGGGCAAAA+GGG | - | chr4_2:73998211-73998230 | Msa0621750:exon | 30.0% | |
| !! | TTGATGATTTCAAGTTACTC+TGG | - | chr4_2:73998326-73998345 | Msa0621750:CDS | 30.0% |
| ! | ATTTTTCCTGTATCACACTT+TGG | - | chr4_2:73998781-73998800 | Msa0621750:intron | 30.0% |
| ! | AAAAAGTATAGCATAGTCCA+AGG | + | chr4_2:73998838-73998857 | None:intergenic | 30.0% |
| !!! | TTGTTTTTATTGTGCTTACC+AGG | - | chr4_2:73998996-73999015 | Msa0621750:intron | 30.0% |
| !! | TGTTTTTATTGTGCTTACCA+GGG | - | chr4_2:73998997-73999016 | Msa0621750:intron | 30.0% |
| !!! | GATCATGGTATTTTGATTCT+GGG | + | chr4_2:73999114-73999133 | None:intergenic | 30.0% |
| GAAAAAAGACCATACTTGAT+GGG | + | chr4_2:73999136-73999155 | None:intergenic | 30.0% | |
| AGAAAAAAGACCATACTTGA+TGG | + | chr4_2:73999137-73999156 | None:intergenic | 30.0% | |
| GATGTTTCAAGCATAGAATA+TGG | + | chr4_2:73999178-73999197 | None:intergenic | 30.0% | |
| GCCAAATTCATAAAAGACTA+CGG | + | chr4_2:73999221-73999240 | None:intergenic | 30.0% | |
| GCCAAATTCATAAAAGACTA+CGG | + | chr4_2:73999221-73999240 | None:intergenic | 30.0% | |
| GTAAATCACATAATAGTTCG+TGG | + | chr4_2:73999636-73999655 | None:intergenic | 30.0% | |
| TTGTAACAACTATTCCATTG+AGG | + | chr4_2:73999749-73999768 | None:intergenic | 30.0% | |
| !! | TTGTTACAAATTGATGATGC+AGG | - | chr4_2:73999760-73999779 | Msa0621750:intron | 30.0% |
| !! | TTTTAACTCAAGAACCCTTA+AGG | + | chr4_2:73999949-73999968 | None:intergenic | 30.0% |
| ! | GTGTAACCTAAATTGATTCA+TGG | - | chr4_2:74000013-74000032 | Msa0621750:five_prime_UTR | 30.0% |
| ATTCATGGATATGTTCATTC+CGG | - | chr4_2:74000028-74000047 | Msa0621750:five_prime_UTR | 30.0% | |
| !! | GAGATAATTGGTGATTTTCA+GGG | - | chr4_2:74000333-74000352 | Msa0621750:intron | 30.0% |
| AATTCAGTTCGTCACTATAA+AGG | - | chr4_2:74000418-74000437 | Msa0621750:intron | 30.0% | |
| ATTCAGTTCGTCACTATAAA+GGG | - | chr4_2:74000419-74000438 | Msa0621750:intron | 30.0% | |
| GTGAAATTGAAACTGTGATG+TGG | - | chr4_2:73998259-73998278 | Msa0621750:CDS | 35.0% | |
| GGAACGAAAATCAAAGAAGT+GGG | - | chr4_2:73998483-73998502 | Msa0621750:intron | 35.0% | |
| ! | GGAACAATGTCGTTTATGAA+AGG | - | chr4_2:73998504-73998523 | Msa0621750:intron | 35.0% |
| ! | TGACTCTTTTTGCTGAACAA+TGG | - | chr4_2:73998695-73998714 | Msa0621750:intron | 35.0% |
| CATAATCCAAAGTGTGATAC+AGG | + | chr4_2:73998790-73998809 | None:intergenic | 35.0% | |
| CTGTATCACACTTTGGATTA+TGG | - | chr4_2:73998788-73998807 | Msa0621750:intron | 35.0% | |
| !!! | GGATCATGGTATTTTGATTC+TGG | + | chr4_2:73999115-73999134 | None:intergenic | 35.0% |
| ACTACGGCAATACAAAAACT+GGG | + | chr4_2:73999205-73999224 | None:intergenic | 35.0% | |
| ! | GCCGTAGTCTTTTATGAATT+TGG | - | chr4_2:73999217-73999236 | Msa0621750:intron | 35.0% |
| ACTACGGCAATACAAAAACT+GGG | + | chr4_2:73999205-73999224 | None:intergenic | 35.0% | |
| ! | GCCGTAGTCTTTTATGAATT+TGG | - | chr4_2:73999217-73999236 | Msa0621750:intron | 35.0% |
| TATTGTGGACTTCTTTCTAG+AGG | - | chr4_2:73999431-73999450 | Msa0621750:CDS | 35.0% | |
| ATTGTGGACTTCTTTCTAGA+GGG | - | chr4_2:73999432-73999451 | Msa0621750:CDS | 35.0% | |
| TACCTTGTATGTTCTGTTGA+TGG | - | chr4_2:73999584-73999603 | Msa0621750:intron | 35.0% | |
| AACCATCAACAGAACATACA+AGG | + | chr4_2:73999589-73999608 | None:intergenic | 35.0% | |
| !!! | ATGTTCTGTTGATGGTTTTG+TGG | - | chr4_2:73999592-73999611 | Msa0621750:intron | 35.0% |
| !!! | GCTGGTTTTATCAATTCACT+AGG | - | chr4_2:73999719-73999738 | Msa0621750:intron | 35.0% |
| ATTCACTAGGAATTCCTCAA+TGG | - | chr4_2:73999732-73999751 | Msa0621750:intron | 35.0% | |
| AGTTCATGTCTACTTGTTTG+TGG | - | chr4_2:73999863-73999882 | Msa0621750:exon | 35.0% | |
| CTTAAGGCAAATAATCGAGA+CGG | + | chr4_2:73999933-73999952 | None:intergenic | 35.0% | |
| GTCTCGATTATTTGCCTTAA+GGG | - | chr4_2:73999932-73999951 | Msa0621750:five_prime_UTR | 35.0% | |
| GTTCTTGAGTTAAAAGAGCA+TGG | - | chr4_2:73999954-73999973 | Msa0621750:five_prime_UTR | 35.0% | |
| GGAATATATAGCAGAGAAGA+AGG | - | chr4_2:74000115-74000134 | Msa0621750:intron | 35.0% | |
| ACTTGTGAAGCAAAAGAAAG+AGG | - | chr4_2:74000289-74000308 | Msa0621750:intron | 35.0% | |
| !! | CGAGATAATTGGTGATTTTC+AGG | - | chr4_2:74000332-74000351 | Msa0621750:intron | 35.0% |
| CGAAAACTTGCATGAAATTC+TGG | + | chr4_2:74000514-74000533 | None:intergenic | 35.0% | |
| ! | TTTCATGCAAGTTTTCGCTT+TGG | - | chr4_2:74000517-74000536 | Msa0621750:five_prime_UTR | 35.0% |
| AAACTGCTTGATGAACAAAC+TGG | + | chr4_2:74000590-74000609 | None:intergenic | 35.0% | |
| GAAGGAATAGCGATTCAGAT+AGG | + | chr4_2:73998003-73998022 | None:intergenic | 40.0% | |
| AATCAGTACTTACAGCTGGA+GGG | + | chr4_2:73998122-73998141 | None:intergenic | 40.0% | |
| TCAGAATCAGTACTTACAGC+TGG | + | chr4_2:73998126-73998145 | None:intergenic | 40.0% | |
| AAACAAAAGGGCAAAAGGGA+AGG | - | chr4_2:73998215-73998234 | Msa0621750:exon | 40.0% | |
| AACAAAAGGGCAAAAGGGAA+GGG | - | chr4_2:73998216-73998235 | Msa0621750:exon | 40.0% | |
| CATTGAAGCAACTAGCAACA+GGG | - | chr4_2:73998462-73998481 | Msa0621750:intron | 40.0% | |
| GGGAACGAAAATCAAAGAAG+TGG | - | chr4_2:73998482-73998501 | Msa0621750:intron | 40.0% | |
| TCTGGAGATTAACTGTTCCA+TGG | + | chr4_2:73998598-73998617 | None:intergenic | 40.0% | |
| AACATCCTCAGGAAAAGTGA+TGG | + | chr4_2:73999065-73999084 | None:intergenic | 40.0% | |
| CTCTTGACATAAACATCCTC+AGG | + | chr4_2:73999076-73999095 | None:intergenic | 40.0% | |
| CTGAGGATGTTTATGTCAAG+AGG | - | chr4_2:73999074-73999093 | Msa0621750:intron | 40.0% | |
| TACCATGATCCCATCAAGTA+TGG | - | chr4_2:73999124-73999143 | Msa0621750:intron | 40.0% | |
| GACTACGGCAATACAAAAAC+TGG | + | chr4_2:73999206-73999225 | None:intergenic | 40.0% | |
| GACTACGGCAATACAAAAAC+TGG | + | chr4_2:73999206-73999225 | None:intergenic | 40.0% | |
| AATCTGAGAAAACGTGAAGC+AGG | + | chr4_2:73999506-73999525 | None:intergenic | 40.0% | |
| TACACAAGATGCATAGTGTG+TGG | - | chr4_2:73999785-73999804 | Msa0621750:intron | 40.0% | |
| CGTCTCGATTATTTGCCTTA+AGG | - | chr4_2:73999931-73999950 | Msa0621750:five_prime_UTR | 40.0% | |
| ! | AAAAGAGCATGGCATTAGTG+AGG | - | chr4_2:73999965-73999984 | Msa0621750:five_prime_UTR | 40.0% |
| CATTAGTGAGGATGAAGCAA+TGG | - | chr4_2:73999977-73999996 | Msa0621750:five_prime_UTR | 40.0% | |
| !! | GTGTGTGTGTGCTTTTTAGA+TGG | - | chr4_2:74000094-74000113 | Msa0621750:five_prime_UTR | 40.0% |
| TTCACAAGTTCACGTATGCT+GGG | + | chr4_2:74000278-74000297 | None:intergenic | 40.0% | |
| AGAGATTCGGACGAGATAAT+TGG | - | chr4_2:74000321-74000340 | Msa0621750:intron | 40.0% | |
| !! | GCAAGTTTTCGCTTTGGTTT+AGG | - | chr4_2:74000523-74000542 | Msa0621750:five_prime_UTR | 40.0% |
| TTACACAAGACAGCAGCTAT+AGG | + | chr4_2:74000549-74000568 | None:intergenic | 40.0% | |
| ! | GTTCATCAAGCAGTTTTCGT+CGG | - | chr4_2:74000594-74000613 | Msa0621750:five_prime_UTR | 40.0% |
| TAGACACAGAGACAGGAAGA+AGG | + | chr4_2:73998021-73998040 | None:intergenic | 45.0% | |
| GAATCAGTACTTACAGCTGG+AGG | + | chr4_2:73998123-73998142 | None:intergenic | 45.0% | |
| TCAACCTTATCTGCGTGACT+CGG | - | chr4_2:73998369-73998388 | Msa0621750:CDS | 45.0% | |
| GCATTGAAGCAACTAGCAAC+AGG | - | chr4_2:73998461-73998480 | Msa0621750:intron | 45.0% | |
| !! | TTCCATGGCTTTGAGCCAAA+CGG | + | chr4_2:73998583-73998602 | None:intergenic | 45.0% |
| CTAGATGGGAGATTCTCAAG+TGG | + | chr4_2:73998661-73998680 | None:intergenic | 45.0% | |
| !!! | GACGTTATTTTTCCCAGCCT+TGG | - | chr4_2:73998818-73998837 | Msa0621750:intron | 45.0% |
| GTATAGCATAGTCCAAGGCT+GGG | + | chr4_2:73998833-73998852 | None:intergenic | 45.0% | |
| AGTATAGCATAGTCCAAGGC+TGG | + | chr4_2:73998834-73998853 | None:intergenic | 45.0% | |
| GACCATACTTGATGGGATCA+TGG | + | chr4_2:73999129-73999148 | None:intergenic | 45.0% | |
| GGTCAACATTTCCCCATTCA+TGG | + | chr4_2:73999349-73999368 | None:intergenic | 45.0% | |
| TCGTGGAAAAAGAACAGCTG+AGG | + | chr4_2:73999619-73999638 | None:intergenic | 45.0% | |
| TAGATGCTTCCATCTGCATC+AGG | - | chr4_2:73999820-73999839 | Msa0621750:intron | 45.0% | |
| AATAGTCCTCCTGATGCAGA+TGG | + | chr4_2:73999832-73999851 | None:intergenic | 45.0% | |
| ! | ACAGGACAAGGAAATGGGTT+TGG | + | chr4_2:74000203-74000222 | None:intergenic | 45.0% |
| CCTTGACAGGACAAGGAAAT+GGG | + | chr4_2:74000208-74000227 | None:intergenic | 45.0% | |
| TCCTTGACAGGACAAGGAAA+TGG | + | chr4_2:74000209-74000228 | None:intergenic | 45.0% | |
| TGAATCTCCTTGACAGGACA+AGG | + | chr4_2:74000215-74000234 | None:intergenic | 45.0% | |
| TCAGCTTGAATCTCCTTGAC+AGG | + | chr4_2:74000221-74000240 | None:intergenic | 45.0% | |
| TGTCAAGGAGATTCAAGCTG+AGG | - | chr4_2:74000220-74000239 | Msa0621750:intron | 45.0% | |
| CTTCACAAGTTCACGTATGC+TGG | + | chr4_2:74000279-74000298 | None:intergenic | 45.0% | |
| GAGGAATCCATGCAGAGATT+CGG | - | chr4_2:74000308-74000327 | Msa0621750:intron | 45.0% | |
| TGCTCTCTAGACACAGAGAC+AGG | + | chr4_2:73998028-73998047 | None:intergenic | 50.0% | |
| ! | GTAATGGAAGGCTGACGTCT+CGG | + | chr4_2:73998089-73998108 | None:intergenic | 50.0% |
| AAAGCCGAGTCACGCAGATA+AGG | + | chr4_2:73998376-73998395 | None:intergenic | 50.0% | |
| TCGATCCAGAAAGCTCGTGA+AGG | - | chr4_2:73998539-73998558 | Msa0621750:intron | 50.0% | |
| CGATCCAGAAAGCTCGTGAA+GGG | - | chr4_2:73998540-73998559 | Msa0621750:intron | 50.0% | |
| CAAACCCTTCACGAGCTTTC+TGG | + | chr4_2:73998547-73998566 | None:intergenic | 50.0% | |
| CAGAAAGCTCGTGAAGGGTT+TGG | - | chr4_2:73998545-73998564 | Msa0621750:intron | 50.0% | |
| !! | TCCATGGCTTTGAGCCAAAC+GGG | + | chr4_2:73998582-73998601 | None:intergenic | 50.0% |
| TCAGGTCGAGGAAATGTTGC+TGG | + | chr4_2:73999028-73999047 | None:intergenic | 50.0% | |
| AGCAACATTTCCTCGACCTG+AGG | - | chr4_2:73999027-73999046 | Msa0621750:intron | 50.0% | |
| GCAACATTTCCTCGACCTGA+GGG | - | chr4_2:73999028-73999047 | Msa0621750:intron | 50.0% | |
| ATGGTCTGCAGTTTACCCTC+AGG | + | chr4_2:73999046-73999065 | None:intergenic | 50.0% | |
| !! | GCAGACCATCACTTTTCCTG+AGG | - | chr4_2:73999057-73999076 | Msa0621750:intron | 50.0% |
| ATGCTTCCATCTGCATCAGG+AGG | - | chr4_2:73999823-73999842 | Msa0621750:intron | 50.0% | |
| GCAAATAATCGAGACGGAGC+AGG | + | chr4_2:73999927-73999946 | None:intergenic | 50.0% | |
| AAGCAAATTGCGCGCCTTCA+AGG | - | chr4_2:74000164-74000183 | Msa0621750:intron | 50.0% | |
| AGCAAATTGCGCGCCTTCAA+GGG | - | chr4_2:74000165-74000184 | Msa0621750:intron | 50.0% | |
| GAGGCAGTTTCTTCCCTTGA+AGG | + | chr4_2:74000181-74000200 | None:intergenic | 50.0% | |
| ! | GGACAAGGAAATGGGTTTGG+AGG | + | chr4_2:74000200-74000219 | None:intergenic | 50.0% |
| CCCATTTCCTTGTCCTGTCA+AGG | - | chr4_2:74000205-74000224 | Msa0621750:intron | 50.0% | |
| AGGAGATTCAAGCTGAGGAG+AGG | - | chr4_2:74000225-74000244 | Msa0621750:intron | 50.0% | |
| ATCTCGTCCGAATCTCTGCA+TGG | + | chr4_2:74000318-74000337 | None:intergenic | 50.0% | |
| GTAATGAACGGAGGAGGAGG+AGG | + | chr4_2:73998057-73998076 | None:intergenic | 55.0% | |
| !! | CCTCTTGCTGTTGCTGTTGC+AGG | + | chr4_2:73998440-73998459 | None:intergenic | 55.0% |
| CCTGCAACAGCAACAGCAAG+AGG | - | chr4_2:73998437-73998456 | Msa0621750:CDS | 55.0% | |
| !! | GGCTTTGAGCCAAACGGGTT+CGG | + | chr4_2:73998577-73998596 | None:intergenic | 55.0% |
| ! | ACCCGTTTGGCTCAAAGCCA+TGG | - | chr4_2:73998578-73998597 | Msa0621750:CDS | 55.0% |
| ! | AAATGTTGCTGGTGGTGCCC+TGG | + | chr4_2:73999017-73999036 | None:intergenic | 55.0% |
| GGTCGAGGAAATGTTGCTGG+TGG | + | chr4_2:73999025-73999044 | None:intergenic | 55.0% | |
| TGCAGTTTACCCTCAGGTCG+AGG | + | chr4_2:73999040-73999059 | None:intergenic | 55.0% | |
| ! | GCGCGCAATTTGCTTCAGAC+GGG | + | chr4_2:74000159-74000178 | None:intergenic | 55.0% |
| ! | GGCGCGCAATTTGCTTCAGA+CGG | + | chr4_2:74000160-74000179 | None:intergenic | 55.0% |
| GCGGTAATGAACGGAGGAGG+AGG | + | chr4_2:73998060-73998079 | None:intergenic | 60.0% | |
| ATGGAAGGCTGACGTCTCGG+CGG | + | chr4_2:73998086-73998105 | None:intergenic | 60.0% | |
| GCTCGTGAAGGGTTTGGCCA+AGG | - | chr4_2:73998551-73998570 | Msa0621750:intron | 60.0% | |
| CGGGCGGTAATGAACGGAGG+AGG | + | chr4_2:73998063-73998082 | None:intergenic | 65.0% | |
| ! | GGCGTCGCGGCAGTAATGGA+AGG | + | chr4_2:73998101-73998120 | None:intergenic | 65.0% |
| !! | CTTACAGCTGGAGGGCGTCG+CGG | + | chr4_2:73998114-73998133 | None:intergenic | 65.0% |
| TGGCCAAGGCCGAACCCGTT+TGG | - | chr4_2:73998565-73998584 | Msa0621750:CDS | 65.0% | |
| ! | GAGCCAAACGGGTTCGGCCT+TGG | + | chr4_2:73998571-73998590 | None:intergenic | 65.0% |
| CGGCGGGCGGTAATGAACGG+AGG | + | chr4_2:73998066-73998085 | None:intergenic | 70.0% | |
| CGGCGGCGGGCGGTAATGAA+CGG | + | chr4_2:73998069-73998088 | None:intergenic | 70.0% | |
| AAGGCTGACGTCTCGGCGGC+GGG | + | chr4_2:73998082-73998101 | None:intergenic | 70.0% | |
| GAAGGCTGACGTCTCGGCGG+CGG | + | chr4_2:73998083-73998102 | None:intergenic | 70.0% | |
| !! | GGAGGGCGTCGCGGCAGTAA+TGG | + | chr4_2:73998105-73998124 | None:intergenic | 70.0% |
| ! | GCTGACGTCTCGGCGGCGGG+CGG | + | chr4_2:73998079-73998098 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 73997910 | 74000659 | 73997910 | ID=Msa0621750;Name=Msa0621750 |
| chr4_2 | mRNA | 73997910 | 74000659 | 73997910 | ID=Msa0621750-mRNA-1;Parent=Msa0621750;Name=Msa0621750-mRNA-1;_AED=0.13;_eAED=0.13;_QI=460|0.75|0.8|1|0.5|0.8|5|313|160 |
| chr4_2 | exon | 73997910 | 73998456 | 73997910 | ID=Msa0621750-mRNA-1:exon:22273;Parent=Msa0621750-mRNA-1 |
| chr4_2 | exon | 73998559 | 73998661 | 73998559 | ID=Msa0621750-mRNA-1:exon:22272;Parent=Msa0621750-mRNA-1 |
| chr4_2 | exon | 73999429 | 73999551 | 73999429 | ID=Msa0621750-mRNA-1:exon:22271;Parent=Msa0621750-mRNA-1 |
| chr4_2 | exon | 73999853 | 74000116 | 73999853 | ID=Msa0621750-mRNA-1:exon:22270;Parent=Msa0621750-mRNA-1 |
| chr4_2 | exon | 74000441 | 74000659 | 74000441 | ID=Msa0621750-mRNA-1:exon:22269;Parent=Msa0621750-mRNA-1 |
| chr4_2 | five_prime_UTR | 74000441 | 74000659 | 74000441 | ID=Msa0621750-mRNA-1:five_prime_utr;Parent=Msa0621750-mRNA-1 |
| chr4_2 | five_prime_UTR | 73999876 | 74000116 | 73999876 | ID=Msa0621750-mRNA-1:five_prime_utr;Parent=Msa0621750-mRNA-1 |
| chr4_2 | CDS | 73999853 | 73999875 | 73999853 | ID=Msa0621750-mRNA-1:cds;Parent=Msa0621750-mRNA-1 |
| chr4_2 | CDS | 73999429 | 73999551 | 73999429 | ID=Msa0621750-mRNA-1:cds;Parent=Msa0621750-mRNA-1 |
| chr4_2 | CDS | 73998559 | 73998661 | 73998559 | ID=Msa0621750-mRNA-1:cds;Parent=Msa0621750-mRNA-1 |
| chr4_2 | CDS | 73998223 | 73998456 | 73998223 | ID=Msa0621750-mRNA-1:cds;Parent=Msa0621750-mRNA-1 |
| chr4_2 | three_prime_UTR | 73997910 | 73998222 | 73997910 | ID=Msa0621750-mRNA-1:three_prime_utr;Parent=Msa0621750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
