Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199070 | XP_013446208.1 | 97.479 | 476 | 5 | 2 | 1 | 473 | 1 | 472 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199070 | sp|Q8VYP9|ICML1_ARATH | 66.735 | 487 | 137 | 7 | 1 | 473 | 1 | 476 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029850 | Msa1199070 | 0.828365 | 9.362295e-55 | -8.615850e-47 |
| Msa0033440 | Msa1199070 | 0.811626 | 6.373820e-51 | -8.615850e-47 |
| Msa0040620 | Msa1199070 | 0.822125 | 2.799694e-53 | -8.615850e-47 |
| Msa0048000 | Msa1199070 | 0.816575 | 5.152264e-52 | -8.615850e-47 |
| Msa0077180 | Msa1199070 | 0.803904 | 2.790361e-49 | -8.615850e-47 |
| Msa0117770 | Msa1199070 | 0.811336 | 7.367491e-51 | -8.615850e-47 |
| Msa0120340 | Msa1199070 | 0.821324 | 4.288793e-53 | -8.615850e-47 |
| Msa0610590 | Msa1199070 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa0613090 | Msa1199070 | 0.801896 | 7.251500e-49 | -8.615850e-47 |
| Msa0613460 | Msa1199070 | 0.809582 | 1.761808e-50 | -8.615850e-47 |
| Msa0618360 | Msa1199070 | 0.811509 | 6.755984e-51 | -8.615850e-47 |
| Msa0625120 | Msa1199070 | 0.801469 | 8.872039e-49 | -8.615850e-47 |
| Msa0653320 | Msa1199070 | -0.802202 | 6.273449e-49 | -8.615850e-47 |
| Msa0792260 | Msa1199070 | 0.814721 | 1.333663e-51 | -8.615850e-47 |
| Msa0801740 | Msa1199070 | 0.824289 | 8.747917e-54 | -8.615850e-47 |
| Msa0803590 | Msa1199070 | 0.814590 | 1.425488e-51 | -8.615850e-47 |
| Msa0831150 | Msa1199070 | 0.814233 | 1.710349e-51 | -8.615850e-47 |
| Msa0838930 | Msa1199070 | 0.800624 | 1.320618e-48 | -8.615850e-47 |
| Msa0125050 | Msa1199070 | 0.807326 | 5.339968e-50 | -8.615850e-47 |
| Msa0138500 | Msa1199070 | 0.821329 | 4.277662e-53 | -8.615850e-47 |
| Msa0138520 | Msa1199070 | 0.817300 | 3.541595e-52 | -8.615850e-47 |
| Msa0169820 | Msa1199070 | 0.839276 | 1.745994e-57 | -8.615850e-47 |
| Msa0175050 | Msa1199070 | 0.812594 | 3.918726e-51 | -8.615850e-47 |
| Msa0183010 | Msa1199070 | -0.817176 | 3.777131e-52 | -8.615850e-47 |
| Msa0199800 | Msa1199070 | -0.815015 | 1.147975e-51 | -8.615850e-47 |
| Msa0226180 | Msa1199070 | 0.817240 | 3.653560e-52 | -8.615850e-47 |
| Msa0230640 | Msa1199070 | -0.817289 | 3.561768e-52 | -8.615850e-47 |
| Msa0365490 | Msa1199070 | 0.801385 | 9.231215e-49 | -8.615850e-47 |
| Msa0376590 | Msa1199070 | 0.832414 | 9.582635e-56 | -8.615850e-47 |
| Msa0381600 | Msa1199070 | -0.808943 | 2.415819e-50 | -8.615850e-47 |
| Msa0424990 | Msa1199070 | 0.818225 | 2.190911e-52 | -8.615850e-47 |
| Msa0436370 | Msa1199070 | 0.858014 | 1.101672e-62 | -8.615850e-47 |
| Msa0449760 | Msa1199070 | 0.825264 | 5.153077e-54 | -8.615850e-47 |
| Msa0458440 | Msa1199070 | 0.818645 | 1.759375e-52 | -8.615850e-47 |
| Msa0464900 | Msa1199070 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa0467930 | Msa1199070 | 0.839646 | 1.399122e-57 | -8.615850e-47 |
| Msa0473240 | Msa1199070 | 0.801859 | 7.381055e-49 | -8.615850e-47 |
| Msa0477130 | Msa1199070 | -0.801824 | 7.501900e-49 | -8.615850e-47 |
| Msa0482190 | Msa1199070 | -0.809870 | 1.528104e-50 | -8.615850e-47 |
| Msa0982240 | Msa1199070 | 0.854019 | 1.626418e-61 | -8.615850e-47 |
| Msa0994740 | Msa1199070 | 0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa1041600 | Msa1199070 | -0.803103 | 4.090017e-49 | -8.615850e-47 |
| Msa1065610 | Msa1199070 | 0.821299 | 4.346041e-53 | -8.615850e-47 |
| Msa1068200 | Msa1199070 | -0.829025 | 6.483649e-55 | -8.615850e-47 |
| Msa1075080 | Msa1199070 | -0.846101 | 2.683841e-59 | -8.615850e-47 |
| Msa1075220 | Msa1199070 | -0.813481 | 2.504812e-51 | -8.615850e-47 |
| Msa1080160 | Msa1199070 | 0.805784 | 1.129254e-49 | -8.615850e-47 |
| Msa1084260 | Msa1199070 | 0.835275 | 1.844839e-56 | -8.615850e-47 |
| Msa0260810 | Msa1199070 | 0.810942 | 8.970064e-51 | -8.615850e-47 |
| Msa0350720 | Msa1199070 | 0.804792 | 1.822743e-49 | -8.615850e-47 |
| Msa1124540 | Msa1199070 | -0.820866 | 5.468836e-53 | -8.615850e-47 |
| Msa1155350 | Msa1199070 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa1156340 | Msa1199070 | -0.814443 | 1.536742e-51 | -8.615850e-47 |
| Msa1166500 | Msa1199070 | -0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa1170800 | Msa1199070 | 0.851945 | 6.377265e-61 | -8.615850e-47 |
| Msa1174310 | Msa1199070 | 0.805204 | 1.494709e-49 | -8.615850e-47 |
| Msa1199070 | Msa1224580 | -0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa1199070 | Msa1241570 | 0.810236 | 1.274107e-50 | -8.615850e-47 |
| Msa1199070 | Msa1258380 | -0.809924 | 1.487641e-50 | -8.615850e-47 |
| Msa1199070 | Msa1276440 | 0.801062 | 1.075002e-48 | -8.615850e-47 |
| Msa1199070 | Msa1307550 | 0.820871 | 5.454914e-53 | -8.615850e-47 |
| Msa1199070 | Msa1314770 | 0.812054 | 5.142482e-51 | -8.615850e-47 |
| Msa1199070 | Msa1335710 | 0.802503 | 5.438922e-49 | -8.615850e-47 |
| Msa1199070 | Msa1341810 | 0.812911 | 3.340217e-51 | -8.615850e-47 |
| Msa1199070 | Msa1348600 | 0.804224 | 2.394000e-49 | -8.615850e-47 |
| Msa1199070 | Msa1373350 | 0.802308 | 5.966643e-49 | -8.615850e-47 |
| Msa1199070 | Msa1379850 | 0.856515 | 3.053707e-62 | -8.615850e-47 |
| Msa1199070 | Msa1393040 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa1199070 | Msa1404540 | 0.802278 | 6.052756e-49 | -8.615850e-47 |
| Msa1199070 | Msa1431060 | 0.801867 | 7.351529e-49 | -8.615850e-47 |
| Msa1199070 | Msa1444250 | -0.810777 | 9.738811e-51 | -8.615850e-47 |
| Msa1199070 | Msa1447150 | 0.851002 | 1.177998e-60 | -8.615850e-47 |
| Msa1199070 | Msa1451620 | -0.829316 | 5.511384e-55 | -8.615850e-47 |
| Msa1199070 | Msa1461810 | -0.804678 | 1.924629e-49 | -8.615850e-47 |
| Msa0485500 | Msa1199070 | -0.803292 | 3.737902e-49 | -8.615850e-47 |
| Msa0516370 | Msa1199070 | 0.832639 | 8.427842e-56 | -8.615850e-47 |
| Msa0572420 | Msa1199070 | 0.827021 | 1.968781e-54 | -8.615850e-47 |
| Msa0572480 | Msa1199070 | 0.852822 | 3.586115e-61 | -8.615850e-47 |
| Msa0578970 | Msa1199070 | 0.803531 | 3.334599e-49 | -8.615850e-47 |
| Msa0599890 | Msa1199070 | 0.807834 | 4.165068e-50 | -8.615850e-47 |
| Msa0845070 | Msa1199070 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
| Msa0847880 | Msa1199070 | 0.814108 | 1.822662e-51 | -8.615850e-47 |
| Msa0876850 | Msa1199070 | -0.861820 | 7.841708e-64 | -8.615850e-47 |
| Msa0908170 | Msa1199070 | 0.800294 | 1.542175e-48 | -8.615850e-47 |
| Msa0924310 | Msa1199070 | 0.809133 | 2.199601e-50 | -8.615850e-47 |
| Msa0942080 | Msa1199070 | -0.831548 | 1.568654e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199070 | MtrunA17_Chr8g0368801 | 97.479 | 476 | 5 | 2 | 1 | 473 | 1 | 472 | 0.0 | 943 |
| Msa1199070 | MtrunA17_Chr6g0456811 | 65.778 | 225 | 77 | 0 | 249 | 473 | 1 | 225 | 4.95e-114 | 335 |
| Msa1199070 | MtrunA17_Chr6g0456821 | 64.286 | 154 | 50 | 1 | 86 | 239 | 8 | 156 | 1.82e-68 | 216 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199070 | AT1G26120.1 | 66.735 | 487 | 137 | 7 | 1 | 473 | 1 | 476 | 0.0 | 645 |
| Msa1199070 | AT5G15860.1 | 68.490 | 384 | 120 | 1 | 90 | 473 | 45 | 427 | 0.0 | 578 |
| Msa1199070 | AT3G02410.1 | 68.668 | 383 | 119 | 1 | 91 | 473 | 41 | 422 | 0.0 | 567 |
| Msa1199070 | AT3G02410.2 | 71.471 | 340 | 95 | 2 | 135 | 473 | 15 | 353 | 0.0 | 528 |
| Msa1199070 | AT3G02410.3 | 65.439 | 353 | 109 | 3 | 91 | 440 | 41 | 383 | 5.60e-173 | 492 |
| Msa1199070 | AT5G15860.2 | 70.085 | 234 | 69 | 1 | 90 | 323 | 45 | 277 | 3.72e-121 | 356 |
Find 121 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCACACTACTGTTATTTC+TGG | 0.129209 | 8_1:+50926322 | Msa1199070:three_prime_UTR |
| CCAGTTGTTGCTTTCATTAC+TGG | 0.188218 | 8_1:+50921338 | Msa1199070:CDS |
| ACCGGAATTCATGTTAAAAT+TGG | 0.200732 | 8_1:+50926154 | Msa1199070:CDS |
| ACTGGTGGAGCCTGGATTAT+TGG | 0.207185 | 8_1:+50921356 | Msa1199070:CDS |
| GAAACAGCATTTCCAAAGTT+TGG | 0.207746 | 8_1:-50924463 | None:intergenic |
| TCCCAGATTAAGGCTTATTT+TGG | 0.213902 | 8_1:+50923602 | Msa1199070:CDS |
| GAAGAAGAAAGAGGCTTCTT+TGG | 0.232680 | 8_1:-50919989 | None:intergenic |
| TATTCAGGGTAGGCTATAAA+TGG | 0.235473 | 8_1:+50920929 | Msa1199070:intron |
| CTTCTTTGGTGGTTGAAAAT+TGG | 0.237445 | 8_1:-50919975 | None:intergenic |
| TGCAACAACATTGCAGAATA+TGG | 0.246894 | 8_1:+50923357 | Msa1199070:CDS |
| ATACGAAGAAGTATAGTTTA+TGG | 0.267217 | 8_1:+50921177 | Msa1199070:CDS |
| TTGGAGTCTTTCCCAGATTA+AGG | 0.278778 | 8_1:+50923592 | Msa1199070:CDS |
| GCTGACACTCTTAAAAGATT+TGG | 0.285324 | 8_1:+50925638 | Msa1199070:CDS |
| AACCAAAATAAGCCTTAATC+TGG | 0.291001 | 8_1:-50923604 | None:intergenic |
| AGTTGTAACAACTTAGGTTT+AGG | 0.295691 | 8_1:+50926387 | Msa1199070:three_prime_UTR |
| TTGAAGATGTTCACATATCT+TGG | 0.301946 | 8_1:+50920340 | Msa1199070:CDS |
| GAGATCAAAAGACTCGTTAA+AGG | 0.317900 | 8_1:-50920055 | None:intergenic |
| CTGGTGGAGCCTGGATTATT+GGG | 0.320382 | 8_1:+50921357 | Msa1199070:CDS |
| TACCTAATGGGGCAGTCAGC+TGG | 0.341241 | 8_1:+50923500 | Msa1199070:CDS |
| ATAAAATCAATTATGTTTGT+TGG | 0.343558 | 8_1:-50926200 | None:intergenic |
| GATGATTATATATACCTGTT+AGG | 0.350335 | 8_1:-50923387 | None:intergenic |
| ATTATGTTTGTTGGCTAGAA+AGG | 0.356013 | 8_1:-50926191 | None:intergenic |
| TCATTGTCTTGTGTTTCTAA+TGG | 0.360275 | 8_1:+50920241 | Msa1199070:CDS |
| AGTTCTGAGAGATCTTCTTT+TGG | 0.361409 | 8_1:+50920265 | Msa1199070:CDS |
| ATGAAAGCAACAACTGGTTT+TGG | 0.366680 | 8_1:-50921332 | None:intergenic |
| AATATGGAGGTGACCCTAAC+AGG | 0.367299 | 8_1:+50923373 | Msa1199070:CDS |
| AGACTCTCCATTAGTATTTG+AGG | 0.367310 | 8_1:+50926291 | Msa1199070:three_prime_UTR |
| GGATCTTGAACCATTACTTC+AGG | 0.369559 | 8_1:-50924442 | None:intergenic |
| TTGTAGCATGCATAGATTAC+AGG | 0.371154 | 8_1:+50921611 | Msa1199070:CDS |
| TGGTGGTTGAAAATTGGTTA+TGG | 0.376224 | 8_1:-50919969 | None:intergenic |
| GTCCACAGAATTTACCTAAT+GGG | 0.377973 | 8_1:+50923488 | Msa1199070:intron |
| GTTGAATCCTCAAATACTAA+TGG | 0.379472 | 8_1:-50926298 | None:intergenic |
| CTTTCATTACTGGTGGAGCC+TGG | 0.387578 | 8_1:+50921348 | Msa1199070:CDS |
| ATGGAGATAAACCACGAAAT+AGG | 0.388643 | 8_1:+50921196 | Msa1199070:CDS |
| CGTCCACAGAATTTACCTAA+TGG | 0.389664 | 8_1:+50923487 | Msa1199070:intron |
| AACGATAGAGGCCTCTACTA+TGG | 0.394433 | 8_1:-50924273 | None:intergenic |
| ATTACACAATTCCTTGCTCT+TGG | 0.398027 | 8_1:+50920952 | Msa1199070:CDS |
| TCAAGCTTCAACAACTCAAT+TGG | 0.418867 | 8_1:+50920139 | Msa1199070:CDS |
| CCTAACCACTATGTTCCTAT+TGG | 0.420190 | 8_1:-50926350 | None:intergenic |
| GTGAAGGAGAGAGTACTTCT+TGG | 0.421807 | 8_1:+50923573 | Msa1199070:CDS |
| CCCCAGCTGACTGCCCCATT+AGG | 0.424541 | 8_1:-50923502 | None:intergenic |
| ATGGTTCAAGATCCAAACTT+TGG | 0.426782 | 8_1:+50924451 | Msa1199070:CDS |
| AATAAAGCATACCTATTTCG+TGG | 0.427947 | 8_1:-50921207 | None:intergenic |
| GGTGGTTGAAAATTGGTTAT+GGG | 0.432219 | 8_1:-50919968 | None:intergenic |
| TTCTATCTATTACAGCATAA+TGG | 0.432600 | 8_1:+50924390 | Msa1199070:intron |
| TCCGGTACAAGCCGTTTCCT+TGG | 0.433902 | 8_1:-50926137 | None:intergenic |
| TCATCATCTCCACCCCTCAT+AGG | 0.435538 | 8_1:-50926041 | None:intergenic |
| ACCTAATGGGGCAGTCAGCT+GGG | 0.437926 | 8_1:+50923501 | Msa1199070:CDS |
| AGCGTGTACAATGGTGGAAC+AGG | 0.439175 | 8_1:+50923535 | Msa1199070:CDS |
| TTATTTCTGGAAACACCAAT+AGG | 0.443643 | 8_1:+50926335 | Msa1199070:three_prime_UTR |
| ATGAAAAGTTGTAACAACTT+AGG | 0.444134 | 8_1:+50926381 | Msa1199070:three_prime_UTR |
| CTTGAAGCCTTTGAAAGAAG+AGG | 0.456071 | 8_1:-50920121 | None:intergenic |
| AATCTAGCAAGCCACAATAA+TGG | 0.458382 | 8_1:-50926244 | None:intergenic |
| AACTCAATTGGTGGTGGTGG+TGG | 0.460339 | 8_1:+50920151 | Msa1199070:CDS |
| TTTGTTGATCAATTATGTTA+TGG | 0.463674 | 8_1:+50926515 | Msa1199070:three_prime_UTR |
| TGAAGATGTTCACATATCTT+GGG | 0.464556 | 8_1:+50920341 | Msa1199070:CDS |
| TGTTAAGCCTCTTCTTTCAA+AGG | 0.469162 | 8_1:+50920114 | Msa1199070:CDS |
| TACTATGGAAGTGGTCTACT+AGG | 0.476097 | 8_1:-50924258 | None:intergenic |
| GGTACAAGCCGTTTCCTTGG+AGG | 0.482868 | 8_1:-50926134 | None:intergenic |
| GAGCTGTTGCATCTCTAGAA+AGG | 0.484013 | 8_1:-50926112 | None:intergenic |
| CTGCCTTTCAGGATCCTATG+AGG | 0.488815 | 8_1:+50926027 | Msa1199070:intron |
| ATTTGTGCAGTTACAAAGCA+TGG | 0.489147 | 8_1:+50921548 | Msa1199070:intron |
| GAAGAAAGAGGCTTCTTTGG+TGG | 0.493574 | 8_1:-50919986 | None:intergenic |
| AGATTACATATCAACTTGGT+AGG | 0.495995 | 8_1:+50926262 | Msa1199070:three_prime_UTR |
| TGTTTCTCTACTACCTCCTA+TGG | 0.500435 | 8_1:+50924480 | Msa1199070:CDS |
| TGCCTTTCAGGATCCTATGA+GGG | 0.502657 | 8_1:+50926028 | Msa1199070:intron |
| CCAATAGGAACATAGTGGTT+AGG | 0.508789 | 8_1:+50926350 | Msa1199070:three_prime_UTR |
| ATGATTATATATACCTGTTA+GGG | 0.508845 | 8_1:-50923386 | None:intergenic |
| AGCTTCAACAACTCAATTGG+TGG | 0.508869 | 8_1:+50920142 | Msa1199070:CDS |
| CTTGTTTCTATCAGAAAAGA+CGG | 0.513151 | 8_1:+50920197 | Msa1199070:CDS |
| AGATCAAAAGACTCGTTAAA+GGG | 0.513641 | 8_1:-50920054 | None:intergenic |
| CCAGTAATGAAAGCAACAAC+TGG | 0.513823 | 8_1:-50921338 | None:intergenic |
| TCCAAGGAAACGGCTTGTAC+CGG | 0.515091 | 8_1:+50926136 | Msa1199070:CDS |
| GTTGTTGCTTTCATTACTGG+TGG | 0.517636 | 8_1:+50921341 | Msa1199070:CDS |
| CAGCGAATGTTGAGATGAGA+TGG | 0.519991 | 8_1:-50919891 | None:intergenic |
| GGCTCGAACCTTTGATCTGA+CGG | 0.523811 | 8_1:-50924535 | None:intergenic |
| ATCATCTATCATATCACTGA+TGG | 0.529734 | 8_1:-50923310 | None:intergenic |
| TTCAAACCTTGAATAAAGCC+TGG | 0.530567 | 8_1:-50920997 | None:intergenic |
| AGCTGTTGCATCTCTAGAAA+GGG | 0.537605 | 8_1:-50926111 | None:intergenic |
| TTTGTGCAGTTACAAAGCAT+GGG | 0.539791 | 8_1:+50921549 | Msa1199070:intron |
| ATTCTATTCCGTCAGATCAA+AGG | 0.541473 | 8_1:+50924527 | Msa1199070:CDS |
| TGCATCTCTAGAAAGGGCCT+CGG | 0.541491 | 8_1:-50926105 | None:intergenic |
| TCATACAGATGTGTTTCTAC+AGG | 0.542910 | 8_1:+50925697 | Msa1199070:CDS |
| AACAACTCAATTGGTGGTGG+TGG | 0.544661 | 8_1:+50920148 | Msa1199070:CDS |
| GTTGAAAATTGGTTATGGGA+AGG | 0.548058 | 8_1:-50919964 | None:intergenic |
| TTAGTAGCATATATTCATGC+TGG | 0.548977 | 8_1:+50926077 | Msa1199070:CDS |
| ACCAAAATAAGCCTTAATCT+GGG | 0.552097 | 8_1:-50923603 | None:intergenic |
| CAACAGCTCCTCCAAGGAAA+CGG | 0.554626 | 8_1:+50926126 | Msa1199070:CDS |
| CTATTACAGCATAATGGAAG+GGG | 0.556552 | 8_1:+50924396 | Msa1199070:intron |
| ATCTATTACAGCATAATGGA+AGG | 0.559252 | 8_1:+50924394 | Msa1199070:intron |
| GAACAGGCAATCAAAGAGGC+TGG | 0.559603 | 8_1:+50923551 | Msa1199070:CDS |
| TGCTAGATTACATATCAACT+TGG | 0.560898 | 8_1:+50926258 | Msa1199070:three_prime_UTR |
| AGAGGCCTCTACTATGGAAG+TGG | 0.579735 | 8_1:-50924267 | None:intergenic |
| TTCAACAACTCAATTGGTGG+TGG | 0.593161 | 8_1:+50920145 | Msa1199070:CDS |
| GCAATCAAAGAGGCTGGTGA+AGG | 0.594790 | 8_1:+50923557 | Msa1199070:CDS |
| TTTGTACATAACCATTATTG+TGG | 0.595039 | 8_1:+50926233 | Msa1199070:three_prime_UTR |
| CATCACATACCCAATAATCC+AGG | 0.595412 | 8_1:-50921366 | None:intergenic |
| TATTCATGCTGGCGATGCCG+AGG | 0.595815 | 8_1:+50926088 | Msa1199070:CDS |
| TCTATTACAGCATAATGGAA+GGG | 0.597259 | 8_1:+50924395 | Msa1199070:intron |
| GCCTTTCAGGATCCTATGAG+GGG | 0.599097 | 8_1:+50926029 | Msa1199070:intron |
| ACATATTGCAGCGTGTACAA+TGG | 0.606740 | 8_1:+50923526 | Msa1199070:CDS |
| GTAGACCACTTCCATAGTAG+AGG | 0.614548 | 8_1:+50924262 | Msa1199070:CDS |
| TGACGGAATAGAATAATCTC+CGG | 0.616572 | 8_1:-50924518 | None:intergenic |
| TCCACAGAATTTACCTAATG+GGG | 0.619843 | 8_1:+50923489 | Msa1199070:intron |
| GAGATGCAACAGCTCCTCCA+AGG | 0.620452 | 8_1:+50926120 | Msa1199070:CDS |
| TTTCAGGATCCTATGAGGGG+TGG | 0.621238 | 8_1:+50926032 | Msa1199070:intron |
| ATGATAGATGATGCTTCGCA+AGG | 0.621705 | 8_1:+50923321 | Msa1199070:CDS |
| TTACAGCATAATGGAAGGGG+AGG | 0.622517 | 8_1:+50924399 | Msa1199070:intron |
| GAGCATAACATCCAAGAGCA+AGG | 0.625595 | 8_1:-50920963 | None:intergenic |
| TTGTGCAGTTACAAAGCATG+GGG | 0.627300 | 8_1:+50921550 | Msa1199070:intron |
| CCTAATGGGGCAGTCAGCTG+GGG | 0.630570 | 8_1:+50923502 | Msa1199070:CDS |
| ATATCACTGATGGTTGCTTG+AGG | 0.630773 | 8_1:-50923300 | None:intergenic |
| AAACACCAATAGGAACATAG+TGG | 0.631824 | 8_1:+50926345 | Msa1199070:three_prime_UTR |
| TATTGCAGCGTGTACAATGG+TGG | 0.635449 | 8_1:+50923529 | Msa1199070:CDS |
| GGTGGAACAGGCAATCAAAG+AGG | 0.643862 | 8_1:+50923547 | Msa1199070:CDS |
| GTTATGGGAAGGATCTGAGA+TGG | 0.644633 | 8_1:-50919953 | None:intergenic |
| AATGTTGAGATGAGATGGGT+TGG | 0.651108 | 8_1:-50919886 | None:intergenic |
| AAGGGGAGGAATCACTGCGA+CGG | 0.672456 | 8_1:+50924413 | Msa1199070:CDS |
| AGCGAATGTTGAGATGAGAT+GGG | 0.692842 | 8_1:-50919890 | None:intergenic |
| AACAACATTGCAGAATATGG+AGG | 0.697866 | 8_1:+50923360 | Msa1199070:CDS |
| GTTTCTATCAGAAAAGACGG+AGG | 0.733210 | 8_1:+50920200 | Msa1199070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTAAAAAAAAAAAACT+CGG | + | chr8_1:50920418-50920437 | Msa1199070:intron | 10.0% |
| !! | ATTCAATTAGATATATACTT+CGG | - | chr8_1:50920602-50920621 | None:intergenic | 15.0% |
| !!! | TAATAATATATTTTCTTTGC+AGG | + | chr8_1:50921276-50921295 | Msa1199070:intron | 15.0% |
| !!! | TTTTTCTCTACATAAATTTA+GGG | - | chr8_1:50922260-50922279 | None:intergenic | 15.0% |
| !!! | ATTTTTCTCTACATAAATTT+AGG | - | chr8_1:50922261-50922280 | None:intergenic | 15.0% |
| !! | ATTTATGTAGAGAAAAATAT+AGG | + | chr8_1:50922263-50922282 | Msa1199070:intron | 15.0% |
| !! | AATCATTATTAAACAAAAAC+CGG | - | chr8_1:50924162-50924181 | None:intergenic | 15.0% |
| !!! | TTCTATCATAAACAAAATTT+TGG | - | chr8_1:50925086-50925105 | None:intergenic | 15.0% |
| !!! | ATATATTTTTCTTCAGATTT+TGG | + | chr8_1:50925577-50925596 | Msa1199070:intron | 15.0% |
| !! | TCTATATTACTTAAAATCAA+AGG | + | chr8_1:50925765-50925784 | Msa1199070:intron | 15.0% |
| !! | ATAAAATCAATTATGTTTGT+TGG | - | chr8_1:50926203-50926222 | None:intergenic | 15.0% |
| !!! | TGTATTATTTTTGTGACAAT+TGG | - | chr8_1:50919925-50919944 | None:intergenic | 20.0% |
| !!! | ACTTATTTGAGTTAATCATT+TGG | + | chr8_1:50920624-50920643 | Msa1199070:intron | 20.0% |
| !! | ATGAAAAGAACTTATATGAT+AGG | + | chr8_1:50920683-50920702 | Msa1199070:intron | 20.0% |
| !!! | TAATCACTTATTTCTATTCA+GGG | + | chr8_1:50920915-50920934 | Msa1199070:intron | 20.0% |
| !! | TAGTAGTAATAGATTCAATT+TGG | + | chr8_1:50921680-50921699 | Msa1199070:intron | 20.0% |
| !! | TCAACTATTGTTATATGATT+AGG | + | chr8_1:50921888-50921907 | Msa1199070:intron | 20.0% |
| !! | ATTAAATAGTAGTGTATTTG+AGG | + | chr8_1:50921999-50922018 | Msa1199070:intron | 20.0% |
| !! | TTAAATAGTAGTGTATTTGA+GGG | + | chr8_1:50922000-50922019 | Msa1199070:intron | 20.0% |
| !! | ATTATTTCCTTTGTAACAAA+TGG | - | chr8_1:50922026-50922045 | None:intergenic | 20.0% |
| !! | TTTGTTACAAAGGAAATAAT+TGG | + | chr8_1:50922026-50922045 | Msa1199070:intron | 20.0% |
| !!! | GAATACCTTATTTATGAATT+AGG | - | chr8_1:50922104-50922123 | None:intergenic | 20.0% |
| !! | GAGAAAAATATAGGAATATA+CGG | + | chr8_1:50922272-50922291 | Msa1199070:intron | 20.0% |
| !!! | AAGAAAAAGTGTAATTATGA+AGG | + | chr8_1:50922360-50922379 | Msa1199070:intron | 20.0% |
| !! | ATATTCAAGTGAAAGAAATT+AGG | + | chr8_1:50922386-50922405 | Msa1199070:intron | 20.0% |
| !! | TATTCAAGTGAAAGAAATTA+GGG | + | chr8_1:50922387-50922406 | Msa1199070:intron | 20.0% |
| !! | AAAAGAAACAATGATTTGAA+TGG | + | chr8_1:50922512-50922531 | Msa1199070:intron | 20.0% |
| !! | AAGTAATGCCTATTTAATAA+AGG | - | chr8_1:50922732-50922751 | None:intergenic | 20.0% |
| !! | TTTATCACTATAAAGCAATA+TGG | - | chr8_1:50922854-50922873 | None:intergenic | 20.0% |
| !! | ATGATTATATATACCTGTTA+GGG | - | chr8_1:50923389-50923408 | None:intergenic | 20.0% |
| !! | ATTTAACACAAAAAATGACA+AGG | - | chr8_1:50923648-50923667 | None:intergenic | 20.0% |
| !!! | TTTTAAATTTTGATGAAGCA+CGG | + | chr8_1:50924637-50924656 | Msa1199070:intron | 20.0% |
| !! | AAACTAAAAGAGAAACTAAT+AGG | + | chr8_1:50925034-50925053 | Msa1199070:intron | 20.0% |
| !! | TTGTTTATGATAGAACATTA+TGG | + | chr8_1:50925091-50925110 | Msa1199070:intron | 20.0% |
| !!! | CTGAATCAATTTTATATGAA+GGG | + | chr8_1:50925669-50925688 | Msa1199070:CDS | 20.0% |
| !! | TAAAAAATCACCATTATGTT+GGG | - | chr8_1:50926494-50926513 | None:intergenic | 20.0% |
| !! | ATAAAAAATCACCATTATGT+TGG | - | chr8_1:50926495-50926514 | None:intergenic | 20.0% |
| !! | TTTGTTGATCAATTATGTTA+TGG | + | chr8_1:50926515-50926534 | Msa1199070:three_prime_UTR | 20.0% |
| !!! | AGTTTGTGTTTTTTTTTACG+AGG | - | chr8_1:50919861-50919880 | None:intergenic | 25.0% |
| !!! | ATTAGAAAGCATCCATAATT+GGG | - | chr8_1:50920899-50920918 | None:intergenic | 25.0% |
| !!! | CTAATCACTTATTTCTATTC+AGG | + | chr8_1:50920914-50920933 | Msa1199070:intron | 25.0% |
| ! | GTTTGAATTTAGTGATCTAT+GGG | + | chr8_1:50921013-50921032 | Msa1199070:intron | 25.0% |
| ! | ATATCCAACTACAAAATAGA+GGG | - | chr8_1:50921136-50921155 | None:intergenic | 25.0% |
| !! | ATACGAAGAAGTATAGTTTA+TGG | + | chr8_1:50921177-50921196 | Msa1199070:CDS | 25.0% |
| ! | GTTATAACTATGAATGTAGA+GGG | - | chr8_1:50921241-50921260 | None:intergenic | 25.0% |
| ! | AGTTATAACTATGAATGTAG+AGG | - | chr8_1:50921242-50921261 | None:intergenic | 25.0% |
| !! | TTTTTGCCTAAAAATAGTGA+CGG | + | chr8_1:50921308-50921327 | Msa1199070:CDS | 25.0% |
| ! | ATCCTTTCAAAAATGAAACT+AGG | - | chr8_1:50921433-50921452 | None:intergenic | 25.0% |
| !! | CAAATACTTCAAAACTTGTT+TGG | - | chr8_1:50921527-50921546 | None:intergenic | 25.0% |
| !!! | TGGTAGTATTAAAGTTGATA+TGG | + | chr8_1:50921700-50921719 | Msa1199070:intron | 25.0% |
| ! | TATATGATTAGGATAGTCTT+AGG | + | chr8_1:50921899-50921918 | Msa1199070:intron | 25.0% |
| !! | ATATGATTAGGATAGTCTTA+GGG | + | chr8_1:50921900-50921919 | Msa1199070:intron | 25.0% |
| ! | TACACTACTATTTAATGTTC+AGG | - | chr8_1:50921995-50922014 | None:intergenic | 25.0% |
| ! | TGGTTCCTAATTCATAAATA+AGG | + | chr8_1:50922096-50922115 | Msa1199070:intron | 25.0% |
| ! | AGAAACAAAAGAGTCAATTT+GGG | + | chr8_1:50922309-50922328 | Msa1199070:intron | 25.0% |
| ! | AAAGAAATTAGGGAAAAAGA+AGG | + | chr8_1:50922397-50922416 | Msa1199070:intron | 25.0% |
| ! | AAGAAATTAGGGAAAAAGAA+GGG | + | chr8_1:50922398-50922417 | Msa1199070:intron | 25.0% |
| ! | TTATTCATCCTCAATTTCAA+GGG | - | chr8_1:50922459-50922478 | None:intergenic | 25.0% |
| ! | AGATATCAAATATGTTTCCT+AGG | - | chr8_1:50922575-50922594 | None:intergenic | 25.0% |
| ! | AAACATATTTGATATCTCAC+CGG | + | chr8_1:50922578-50922597 | Msa1199070:intron | 25.0% |
| ! | GAGTGTAACCTTTATTAAAT+AGG | + | chr8_1:50922721-50922740 | Msa1199070:intron | 25.0% |
| ! | ACATGTGCTAATTCTATTAT+AGG | - | chr8_1:50922815-50922834 | None:intergenic | 25.0% |
| !!! | GTTGAACGTATTTTTTTGAA+TGG | - | chr8_1:50922904-50922923 | None:intergenic | 25.0% |
| !! | TTCTAACTTGTCTATTATCA+AGG | + | chr8_1:50922981-50923000 | Msa1199070:intron | 25.0% |
| ! | ATAATTGTACTCAAGTAACT+CGG | - | chr8_1:50923011-50923030 | None:intergenic | 25.0% |
| ! | GATGATTATATATACCTGTT+AGG | - | chr8_1:50923390-50923409 | None:intergenic | 25.0% |
| !! | ATTTGATTTAGTGACACATT+GGG | + | chr8_1:50923698-50923717 | Msa1199070:intron | 25.0% |
| ! | GAACTTATAGAAACAACTTA+TGG | - | chr8_1:50923983-50924002 | None:intergenic | 25.0% |
| ! | TTCTATCTATTACAGCATAA+TGG | + | chr8_1:50924390-50924409 | Msa1199070:intron | 25.0% |
| ! | ATTGTTCAATTAATGTGTCA+TGG | + | chr8_1:50924614-50924633 | Msa1199070:intron | 25.0% |
| !!! | GTTTCTCTTTTAGTTTTTCT+AGG | - | chr8_1:50925030-50925049 | None:intergenic | 25.0% |
| ! | ACTACTAATGTCAAAAACAT+AGG | - | chr8_1:50925194-50925213 | None:intergenic | 25.0% |
| ! | AATCCTTCTTGTATACAATT+AGG | - | chr8_1:50925288-50925307 | None:intergenic | 25.0% |
| ! | ACTACTTAACCCTTTAAATT+TGG | + | chr8_1:50925427-50925446 | Msa1199070:intron | 25.0% |
| ! | CTACTTAACCCTTTAAATTT+GGG | + | chr8_1:50925428-50925447 | Msa1199070:intron | 25.0% |
| !!! | TATACATACAACTTTAAGAC+AGG | + | chr8_1:50925461-50925480 | Msa1199070:intron | 25.0% |
| !!! | ATACATACAACTTTAAGACA+GGG | + | chr8_1:50925462-50925481 | Msa1199070:intron | 25.0% |
| !! | GCTGAATCAATTTTATATGA+AGG | + | chr8_1:50925668-50925687 | Msa1199070:CDS | 25.0% |
| ! | AAAAATAAGTTAGTTCAGAG+AGG | - | chr8_1:50925857-50925876 | None:intergenic | 25.0% |
| ! | TACAGATAATGTTTCTCTTT+AGG | + | chr8_1:50925922-50925941 | Msa1199070:intron | 25.0% |
| ! | TTTGTACATAACCATTATTG+TGG | + | chr8_1:50926233-50926252 | Msa1199070:three_prime_UTR | 25.0% |
| ! | ATGAAAAGTTGTAACAACTT+AGG | + | chr8_1:50926381-50926400 | Msa1199070:three_prime_UTR | 25.0% |
| !! | ATTTTTAACAAATGGAAGCA+AGG | - | chr8_1:50926469-50926488 | None:intergenic | 25.0% |
| ! | TTAAAAATGTCCCAACATAA+TGG | + | chr8_1:50926481-50926500 | Msa1199070:three_prime_UTR | 25.0% |
| !!! | GTTTTTTTTTACGAGGATGT+CGG | - | chr8_1:50919854-50919873 | None:intergenic | 30.0% |
| AGATCAAAAGACTCGTTAAA+GGG | - | chr8_1:50920057-50920076 | None:intergenic | 30.0% | |
| !! | CTTGTTTCTATCAGAAAAGA+CGG | + | chr8_1:50920197-50920216 | Msa1199070:CDS | 30.0% |
| ! | TCATTGTCTTGTGTTTCTAA+TGG | + | chr8_1:50920241-50920260 | Msa1199070:CDS | 30.0% |
| TTGAAGATGTTCACATATCT+TGG | + | chr8_1:50920340-50920359 | Msa1199070:CDS | 30.0% | |
| TGAAGATGTTCACATATCTT+GGG | + | chr8_1:50920341-50920360 | Msa1199070:CDS | 30.0% | |
| !!! | ACTAGTCACTCTGTTTTAAT+CGG | - | chr8_1:50920503-50920522 | None:intergenic | 30.0% |
| ! | AGTGACTAGTTCATGAAAAT+TGG | + | chr8_1:50920513-50920532 | Msa1199070:intron | 30.0% |
| AGTTCATGAAAATTGGCATA+TGG | + | chr8_1:50920520-50920539 | Msa1199070:intron | 30.0% | |
| ! | GTTCTTTTCATTAGCTATTG+TGG | - | chr8_1:50920674-50920693 | None:intergenic | 30.0% |
| TCAAATTGCTCTCAATTAAC+AGG | + | chr8_1:50920767-50920786 | Msa1199070:intron | 30.0% | |
| ATCATTCCATATCCCAATTA+TGG | + | chr8_1:50920884-50920903 | Msa1199070:intron | 30.0% | |
| !! | GATTAGAAAGCATCCATAAT+TGG | - | chr8_1:50920900-50920919 | None:intergenic | 30.0% |
| GGTTTGAATTTAGTGATCTA+TGG | + | chr8_1:50921012-50921031 | Msa1199070:intron | 30.0% | |
| ATCTCACATCAAAAATCTGT+TGG | + | chr8_1:50921095-50921114 | Msa1199070:intron | 30.0% | |
| ! | TTTTCCCTCTATTTTGTAGT+TGG | + | chr8_1:50921129-50921148 | Msa1199070:intron | 30.0% |
| GATATCCAACTACAAAATAG+AGG | - | chr8_1:50921137-50921156 | None:intergenic | 30.0% | |
| AATAAAGCATACCTATTTCG+TGG | - | chr8_1:50921210-50921229 | None:intergenic | 30.0% | |
| ! | TTTTGCCTAAAAATAGTGAC+GGG | + | chr8_1:50921309-50921328 | Msa1199070:CDS | 30.0% |
| ATTCGACAGGGAAAAAAATA+TGG | - | chr8_1:50921393-50921412 | None:intergenic | 30.0% | |
| GGTAAATATCAAATTCGACA+GGG | - | chr8_1:50921405-50921424 | None:intergenic | 30.0% | |
| TGGTAAATATCAAATTCGAC+AGG | - | chr8_1:50921406-50921425 | None:intergenic | 30.0% | |
| !! | TCTTTTAGGTCAACAACTTT+CGG | + | chr8_1:50921576-50921595 | Msa1199070:CDS | 30.0% |
| !!! | TTTTTAGGTTGCACAGAAAA+AGG | + | chr8_1:50921831-50921850 | Msa1199070:intron | 30.0% |
| ! | TATGATTAGGATAGTCTTAG+GGG | + | chr8_1:50921901-50921920 | Msa1199070:intron | 30.0% |
| ! | GGGTTAATATACTTTTGTTC+AGG | + | chr8_1:50921921-50921940 | Msa1199070:intron | 30.0% |
| TATGAATTAGGAACCATATC+AGG | - | chr8_1:50922092-50922111 | None:intergenic | 30.0% | |
| !! | AAGGTATTCTGTTTTACGTA+TGG | + | chr8_1:50922115-50922134 | Msa1199070:intron | 30.0% |
| AACTACAATATTGTAGTCAG+TGG | - | chr8_1:50922169-50922188 | None:intergenic | 30.0% | |
| CAGAAACAAAAGAGTCAATT+TGG | + | chr8_1:50922308-50922327 | Msa1199070:intron | 30.0% | |
| TATTCATCCTCAATTTCAAG+GGG | - | chr8_1:50922458-50922477 | None:intergenic | 30.0% | |
| CTTATTCATCCTCAATTTCA+AGG | - | chr8_1:50922460-50922479 | None:intergenic | 30.0% | |
| AACATATTTGATATCTCACC+GGG | + | chr8_1:50922579-50922598 | Msa1199070:intron | 30.0% | |
| ATTACAGGCACTAAAAGAAA+AGG | + | chr8_1:50922655-50922674 | Msa1199070:intron | 30.0% | |
| GCTTTATAGTGATAAAGAGA+AGG | + | chr8_1:50922858-50922877 | Msa1199070:intron | 30.0% | |
| ATAGTGATAAAGAGAAGGTT+TGG | + | chr8_1:50922863-50922882 | Msa1199070:intron | 30.0% | |
| !!! | ACGTATTTTTTTGAATGGTC+AGG | - | chr8_1:50922899-50922918 | None:intergenic | 30.0% |
| GCTTGTTCAATTCTATCATA+CGG | - | chr8_1:50922950-50922969 | None:intergenic | 30.0% | |
| AAACTTTGTCGAATCTCTAT+CGG | - | chr8_1:50923132-50923151 | None:intergenic | 30.0% | |
| !! | TGTCTCTATTATTTTCGAGA+GGG | - | chr8_1:50923182-50923201 | None:intergenic | 30.0% |
| !! | TTGTCTCTATTATTTTCGAG+AGG | - | chr8_1:50923183-50923202 | None:intergenic | 30.0% |
| ATCATCTATCATATCACTGA+TGG | - | chr8_1:50923313-50923332 | None:intergenic | 30.0% | |
| ATAATCATCCTCTCATTACA+AGG | + | chr8_1:50923401-50923420 | Msa1199070:intron | 30.0% | |
| ACCAAAATAAGCCTTAATCT+GGG | - | chr8_1:50923606-50923625 | None:intergenic | 30.0% | |
| AACCAAAATAAGCCTTAATC+TGG | - | chr8_1:50923607-50923626 | None:intergenic | 30.0% | |
| !!! | AAGGCTTATTTTGGTTTATC+TGG | + | chr8_1:50923611-50923630 | Msa1199070:CDS | 30.0% |
| !!! | CTTATTTTGGTTTATCTGGA+GGG | + | chr8_1:50923615-50923634 | Msa1199070:CDS | 30.0% |
| ! | CATTTGATTTAGTGACACAT+TGG | + | chr8_1:50923697-50923716 | Msa1199070:intron | 30.0% |
| ! | TTTGATTTAGTGACACATTG+GGG | + | chr8_1:50923699-50923718 | Msa1199070:intron | 30.0% |
| TTGGTTTCATACTCTGTATA+AGG | - | chr8_1:50923727-50923746 | None:intergenic | 30.0% | |
| !!! | TATATGCTCGTGGTTTTATT+TGG | + | chr8_1:50923753-50923772 | Msa1199070:intron | 30.0% |
| AATAAGCTCAAATCAGCTTA+TGG | + | chr8_1:50923952-50923971 | Msa1199070:intron | 30.0% | |
| ATTTCTGCTTACTTCAAATC+AGG | + | chr8_1:50924221-50924240 | Msa1199070:intron | 30.0% | |
| TTGAGTGTACCTTAAAAAGA+GGG | - | chr8_1:50924299-50924318 | None:intergenic | 30.0% | |
| TTTGAGTGTACCTTAAAAAG+AGG | - | chr8_1:50924300-50924319 | None:intergenic | 30.0% | |
| ! | ATCTATTACAGCATAATGGA+AGG | + | chr8_1:50924394-50924413 | Msa1199070:intron | 30.0% |
| ! | TCTATTACAGCATAATGGAA+GGG | + | chr8_1:50924395-50924414 | Msa1199070:intron | 30.0% |
| ATTTGAAAACCTCATGAAAG+AGG | - | chr8_1:50924559-50924578 | None:intergenic | 30.0% | |
| ACAAATGCACATAATCTCAA+AGG | - | chr8_1:50924666-50924685 | None:intergenic | 30.0% | |
| TAGAAAAGATGGAGGAAAAT+TGG | + | chr8_1:50924905-50924924 | Msa1199070:intron | 30.0% | |
| AGTCATATCACTAGAAGTAA+AGG | + | chr8_1:50925000-50925019 | Msa1199070:intron | 30.0% | |
| AACTAATAGGAAAGACTTGA+AGG | + | chr8_1:50925047-50925066 | Msa1199070:intron | 30.0% | |
| CTTTGCATTGCTTAATACAT+AGG | - | chr8_1:50925225-50925244 | None:intergenic | 30.0% | |
| CTTCTTGTATACAATTAGGT+TGG | - | chr8_1:50925284-50925303 | None:intergenic | 30.0% | |
| CAACCTAATTGTATACAAGA+AGG | + | chr8_1:50925282-50925301 | Msa1199070:intron | 30.0% | |
| !! | TACTGACTCCCAAATTTAAA+GGG | - | chr8_1:50925439-50925458 | None:intergenic | 30.0% |
| !! | TTACTGACTCCCAAATTTAA+AGG | - | chr8_1:50925440-50925459 | None:intergenic | 30.0% |
| CTTAAAATCAAAGGCTTGAT+TGG | + | chr8_1:50925774-50925793 | Msa1199070:intron | 30.0% | |
| ! | ATAATGTTTCTCTTTAGGAG+TGG | + | chr8_1:50925927-50925946 | Msa1199070:intron | 30.0% |
| !! | TGGTGTTTGCTAATTTTTCT+GGG | + | chr8_1:50925947-50925966 | Msa1199070:intron | 30.0% |
| TTAGTAGCATATATTCATGC+TGG | + | chr8_1:50926077-50926096 | Msa1199070:CDS | 30.0% | |
| ACCGGAATTCATGTTAAAAT+TGG | + | chr8_1:50926154-50926173 | Msa1199070:CDS | 30.0% | |
| !! | GCCAATTTTAACATGAATTC+CGG | - | chr8_1:50926158-50926177 | None:intergenic | 30.0% |
| ! | ATTATGTTTGTTGGCTAGAA+AGG | - | chr8_1:50926194-50926213 | None:intergenic | 30.0% |
| TGCTAGATTACATATCAACT+TGG | + | chr8_1:50926258-50926277 | Msa1199070:three_prime_UTR | 30.0% | |
| AGATTACATATCAACTTGGT+AGG | + | chr8_1:50926262-50926281 | Msa1199070:three_prime_UTR | 30.0% | |
| GTTGAATCCTCAAATACTAA+TGG | - | chr8_1:50926301-50926320 | None:intergenic | 30.0% | |
| !! | TTTCACACTACTGTTATTTC+TGG | + | chr8_1:50926322-50926341 | Msa1199070:three_prime_UTR | 30.0% |
| !! | TTATTTCTGGAAACACCAAT+AGG | + | chr8_1:50926335-50926354 | Msa1199070:three_prime_UTR | 30.0% |
| AGTTGTAACAACTTAGGTTT+AGG | + | chr8_1:50926387-50926406 | Msa1199070:three_prime_UTR | 30.0% | |
| ! | GTTGGGACATTTTTAACAAA+TGG | - | chr8_1:50926477-50926496 | None:intergenic | 30.0% |
| GTTGAAAATTGGTTATGGGA+AGG | - | chr8_1:50919967-50919986 | None:intergenic | 35.0% | |
| GGTGGTTGAAAATTGGTTAT+GGG | - | chr8_1:50919971-50919990 | None:intergenic | 35.0% | |
| TGGTGGTTGAAAATTGGTTA+TGG | - | chr8_1:50919972-50919991 | None:intergenic | 35.0% | |
| ! | CTTCTTTGGTGGTTGAAAAT+TGG | - | chr8_1:50919978-50919997 | None:intergenic | 35.0% |
| GAAGAAGAAGAAGAAGAAAG+AGG | - | chr8_1:50920001-50920020 | None:intergenic | 35.0% | |
| GAGATCAAAAGACTCGTTAA+AGG | - | chr8_1:50920058-50920077 | None:intergenic | 35.0% | |
| TGTTAAGCCTCTTCTTTCAA+AGG | + | chr8_1:50920114-50920133 | Msa1199070:CDS | 35.0% | |
| TCAAGCTTCAACAACTCAAT+TGG | + | chr8_1:50920139-50920158 | Msa1199070:CDS | 35.0% | |
| !!! | AGTTCTGAGAGATCTTCTTT+TGG | + | chr8_1:50920265-50920284 | Msa1199070:CDS | 35.0% |
| !!! | CTAGTCACTCTGTTTTAATC+GGG | - | chr8_1:50920502-50920521 | None:intergenic | 35.0% |
| TCATGAAAATTGGCATATGG+AGG | + | chr8_1:50920523-50920542 | Msa1199070:intron | 35.0% | |
| ACTTATCACATGAGAGCTTA+TGG | + | chr8_1:50920731-50920750 | Msa1199070:intron | 35.0% | |
| ACACCAGTTAAGACTCATAT+TGG | + | chr8_1:50920791-50920810 | Msa1199070:intron | 35.0% | |
| CAACCAATATGAGTCTTAAC+TGG | - | chr8_1:50920797-50920816 | None:intergenic | 35.0% | |
| ! | GTTAAGACTCATATTGGTTG+TGG | + | chr8_1:50920797-50920816 | Msa1199070:intron | 35.0% |
| GGGATATGGAATGATATTCA+TGG | - | chr8_1:50920879-50920898 | None:intergenic | 35.0% | |
| AAGCATCCATAATTGGGATA+TGG | - | chr8_1:50920893-50920912 | None:intergenic | 35.0% | |
| !! | CACTTATTTCTATTCAGGGT+AGG | + | chr8_1:50920919-50920938 | Msa1199070:intron | 35.0% |
| TATTCAGGGTAGGCTATAAA+TGG | + | chr8_1:50920929-50920948 | Msa1199070:intron | 35.0% | |
| ATTACACAATTCCTTGCTCT+TGG | + | chr8_1:50920952-50920971 | Msa1199070:CDS | 35.0% | |
| !!! | CTTTTACCAGGCTTTATTCA+AGG | + | chr8_1:50920991-50921010 | Msa1199070:CDS | 35.0% |
| TTCAAACCTTGAATAAAGCC+TGG | - | chr8_1:50921000-50921019 | None:intergenic | 35.0% | |
| ATGGAGATAAACCACGAAAT+AGG | + | chr8_1:50921196-50921215 | Msa1199070:CDS | 35.0% | |
| !! | ATGAAAGCAACAACTGGTTT+TGG | - | chr8_1:50921335-50921354 | None:intergenic | 35.0% |
| CAAAAATGAAACTAGGCGTA+TGG | - | chr8_1:50921426-50921445 | None:intergenic | 35.0% | |
| !! | CGCCTAGTTTCATTTTTGAA+AGG | + | chr8_1:50921428-50921447 | Msa1199070:intron | 35.0% |
| AGTGACTTTACATGTTGTCA+AGG | - | chr8_1:50921499-50921518 | None:intergenic | 35.0% | |
| ATTTGTGCAGTTACAAAGCA+TGG | + | chr8_1:50921548-50921567 | Msa1199070:intron | 35.0% | |
| TTTGTGCAGTTACAAAGCAT+GGG | + | chr8_1:50921549-50921568 | Msa1199070:intron | 35.0% | |
| TTGTAGCATGCATAGATTAC+AGG | + | chr8_1:50921611-50921630 | Msa1199070:CDS | 35.0% | |
| TTTCTGTGCAACCTAAAAAC+AGG | - | chr8_1:50921830-50921849 | None:intergenic | 35.0% | |
| CAAATGGTACGACAGTAAAT+CGG | - | chr8_1:50922143-50922162 | None:intergenic | 35.0% | |
| ! | ATTGTTCTAAGCAACAGTAC+TGG | + | chr8_1:50922336-50922355 | Msa1199070:intron | 35.0% |
| ! | TTGTTCTAAGCAACAGTACT+GGG | + | chr8_1:50922337-50922356 | Msa1199070:intron | 35.0% |
| AAGGGATGAATAAGCTTCAA+AGG | + | chr8_1:50922416-50922435 | Msa1199070:intron | 35.0% | |
| ! | TCCATGAAAACTGACTTCTA+TGG | + | chr8_1:50922487-50922506 | Msa1199070:intron | 35.0% |
| ! | TCCATAGAAGTCAGTTTTCA+TGG | - | chr8_1:50922491-50922510 | None:intergenic | 35.0% |
| TACACAACCAAAGAGATTAC+AGG | + | chr8_1:50922640-50922659 | Msa1199070:intron | 35.0% | |
| TTTAGTGCCTGTAATCTCTT+TGG | - | chr8_1:50922650-50922669 | None:intergenic | 35.0% | |
| TGAAATTGATACAACATCGC+CGG | + | chr8_1:50923068-50923087 | Msa1199070:intron | 35.0% | |
| TCTTCATATCACAGTCTCAT+CGG | + | chr8_1:50923252-50923271 | Msa1199070:intron | 35.0% | |
| TGCAACAACATTGCAGAATA+TGG | + | chr8_1:50923357-50923376 | Msa1199070:CDS | 35.0% | |
| AACAACATTGCAGAATATGG+AGG | + | chr8_1:50923360-50923379 | Msa1199070:CDS | 35.0% | |
| !!! | TCTTTTTTCTCGTTCTCTGA+AGG | + | chr8_1:50923427-50923446 | Msa1199070:intron | 35.0% |
| GTCCACAGAATTTACCTAAT+GGG | + | chr8_1:50923488-50923507 | Msa1199070:intron | 35.0% | |
| TCCACAGAATTTACCTAATG+GGG | + | chr8_1:50923489-50923508 | Msa1199070:intron | 35.0% | |
| ! | TCCCAGATTAAGGCTTATTT+TGG | + | chr8_1:50923602-50923621 | Msa1199070:CDS | 35.0% |
| !!! | GCTTATTTTGGTTTATCTGG+AGG | + | chr8_1:50923614-50923633 | Msa1199070:CDS | 35.0% |
| TTGATTTAGTGACACATTGG+GGG | + | chr8_1:50923700-50923719 | Msa1199070:intron | 35.0% | |
| ACTTATTTGAGCTTCTCTTC+TGG | - | chr8_1:50924033-50924052 | None:intergenic | 35.0% | |
| TCAAATAAGTCAATCCGAAC+AGG | + | chr8_1:50924043-50924062 | Msa1199070:intron | 35.0% | |
| !! | ATCATGCAATGATGGACTTA+AGG | - | chr8_1:50924090-50924109 | None:intergenic | 35.0% |
| TTAAGTCCATCATTGCATGA+TGG | + | chr8_1:50924089-50924108 | Msa1199070:intron | 35.0% | |
| TTAAGACCATCATGCAATGA+TGG | - | chr8_1:50924098-50924117 | None:intergenic | 35.0% | |
| GCAATAACTACAGATTCTTC+CGG | + | chr8_1:50924140-50924159 | Msa1199070:intron | 35.0% | |
| TTAAAAAGAGGGAACGATAG+AGG | - | chr8_1:50924288-50924307 | None:intergenic | 35.0% | |
| ! | TCTATCGTTCCCTCTTTTTA+AGG | + | chr8_1:50924287-50924306 | Msa1199070:CDS | 35.0% |
| ! | CTATTACAGCATAATGGAAG+GGG | + | chr8_1:50924396-50924415 | Msa1199070:intron | 35.0% |
| ATGGTTCAAGATCCAAACTT+TGG | + | chr8_1:50924451-50924470 | Msa1199070:CDS | 35.0% | |
| GAAACAGCATTTCCAAAGTT+TGG | - | chr8_1:50924466-50924485 | None:intergenic | 35.0% | |
| TGACGGAATAGAATAATCTC+CGG | - | chr8_1:50924521-50924540 | None:intergenic | 35.0% | |
| ATTCTATTCCGTCAGATCAA+AGG | + | chr8_1:50924527-50924546 | Msa1199070:CDS | 35.0% | |
| TGAGTTGTCAAACATGTTAC+AGG | - | chr8_1:50924697-50924716 | None:intergenic | 35.0% | |
| ! | TCTAGTCTGAGATAAGTCTA+AGG | - | chr8_1:50924776-50924795 | None:intergenic | 35.0% |
| TAGACTTATCTCAGACTAGA+TGG | + | chr8_1:50924776-50924795 | Msa1199070:intron | 35.0% | |
| AGACTTATCTCAGACTAGAT+GGG | + | chr8_1:50924777-50924796 | Msa1199070:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr8_1:50924894-50924913 | Msa1199070:intron | 35.0% | |
| ACCTATAGTAGAAAAGATGG+AGG | + | chr8_1:50924897-50924916 | Msa1199070:intron | 35.0% | |
| ! | TCCTCCATCTTTTCTACTAT+AGG | - | chr8_1:50924901-50924920 | None:intergenic | 35.0% |
| ! | AAAATTGGCTTAGGTGGTTT+GGG | + | chr8_1:50924920-50924939 | Msa1199070:intron | 35.0% |
| AGTAAGGAGAGTAGATTAGA+TGG | + | chr8_1:50924972-50924991 | Msa1199070:intron | 35.0% | |
| AGACTTGAAGGTTAATGAGT+CGG | + | chr8_1:50925059-50925078 | Msa1199070:intron | 35.0% | |
| !!! | GAACCTGTGTTTTTTGAGAT+AGG | + | chr8_1:50925353-50925372 | Msa1199070:intron | 35.0% |
| CAACCTATCTCAAAAAACAC+AGG | - | chr8_1:50925359-50925378 | None:intergenic | 35.0% | |
| GCTGACACTCTTAAAAGATT+TGG | + | chr8_1:50925638-50925657 | Msa1199070:CDS | 35.0% | |
| ! | TCATACAGATGTGTTTCTAC+AGG | + | chr8_1:50925697-50925716 | Msa1199070:CDS | 35.0% |
| !! | GTGGTGTTTGCTAATTTTTC+TGG | + | chr8_1:50925946-50925965 | Msa1199070:intron | 35.0% |
| ! | TTCTGGGAAAAAACTTCTCA+TGG | + | chr8_1:50925963-50925982 | Msa1199070:intron | 35.0% |
| !! | GCAGAGGCATTTGAAATAAA+TGG | - | chr8_1:50926011-50926030 | None:intergenic | 35.0% |
| AATCTAGCAAGCCACAATAA+TGG | - | chr8_1:50926247-50926266 | None:intergenic | 35.0% | |
| AGACTCTCCATTAGTATTTG+AGG | + | chr8_1:50926291-50926310 | Msa1199070:three_prime_UTR | 35.0% | |
| AAACACCAATAGGAACATAG+TGG | + | chr8_1:50926345-50926364 | Msa1199070:three_prime_UTR | 35.0% | |
| ! | TTTTACGAGGATGTCGGATT+CGG | - | chr8_1:50919848-50919867 | None:intergenic | 40.0% |
| AATGTTGAGATGAGATGGGT+TGG | - | chr8_1:50919889-50919908 | None:intergenic | 40.0% | |
| AGCGAATGTTGAGATGAGAT+GGG | - | chr8_1:50919893-50919912 | None:intergenic | 40.0% | |
| GAAGAAGAAAGAGGCTTCTT+TGG | - | chr8_1:50919992-50920011 | None:intergenic | 40.0% | |
| ! | CTTGAAGCCTTTGAAAGAAG+AGG | - | chr8_1:50920124-50920143 | None:intergenic | 40.0% |
| AGCTTCAACAACTCAATTGG+TGG | + | chr8_1:50920142-50920161 | Msa1199070:CDS | 40.0% | |
| TTCAACAACTCAATTGGTGG+TGG | + | chr8_1:50920145-50920164 | Msa1199070:CDS | 40.0% | |
| GTTTCTATCAGAAAAGACGG+AGG | + | chr8_1:50920200-50920219 | Msa1199070:CDS | 40.0% | |
| ! | CTTCTTTTGGTCGTGATGTT+AGG | + | chr8_1:50920278-50920297 | Msa1199070:CDS | 40.0% |
| AATCTCACCGTCCACTAATT+GGG | + | chr8_1:50920475-50920494 | Msa1199070:intron | 40.0% | |
| ATATACTTCGGATGCCAGAA+AGG | - | chr8_1:50920590-50920609 | None:intergenic | 40.0% | |
| !! | TTTGGCCCGTCACTATTTTT+AGG | - | chr8_1:50921317-50921336 | None:intergenic | 40.0% |
| CCAGTAATGAAAGCAACAAC+TGG | - | chr8_1:50921341-50921360 | None:intergenic | 40.0% | |
| !! | CCAGTTGTTGCTTTCATTAC+TGG | + | chr8_1:50921338-50921357 | Msa1199070:CDS | 40.0% |
| !! | GTTGTTGCTTTCATTACTGG+TGG | + | chr8_1:50921341-50921360 | Msa1199070:CDS | 40.0% |
| CATCACATACCCAATAATCC+AGG | - | chr8_1:50921369-50921388 | None:intergenic | 40.0% | |
| TTGTGCAGTTACAAAGCATG+GGG | + | chr8_1:50921550-50921569 | Msa1199070:intron | 40.0% | |
| ! | AAAGCATGGGGTTCTCTTTT+AGG | + | chr8_1:50921562-50921581 | Msa1199070:CDS | 40.0% |
| ACTACTGCTGCTGCAAAAAT+GGG | - | chr8_1:50921656-50921675 | None:intergenic | 40.0% | |
| TACTACTGCTGCTGCAAAAA+TGG | - | chr8_1:50921657-50921676 | None:intergenic | 40.0% | |
| AACCTAAAAACAGGTGGATC+GGG | - | chr8_1:50921821-50921840 | None:intergenic | 40.0% | |
| CAACCTAAAAACAGGTGGAT+CGG | - | chr8_1:50921822-50921841 | None:intergenic | 40.0% | |
| ! | TTGAGGGCCATTTGTTACAA+AGG | + | chr8_1:50922016-50922035 | Msa1199070:intron | 40.0% |
| CCATATCAGGCACAAGATAA+GGG | - | chr8_1:50922079-50922098 | None:intergenic | 40.0% | |
| ACCATATCAGGCACAAGATA+AGG | - | chr8_1:50922080-50922099 | None:intergenic | 40.0% | |
| TTGTAGTCAGTGGTCACAAA+TGG | - | chr8_1:50922159-50922178 | None:intergenic | 40.0% | |
| ! | TGTTGTCAAGAGCATAACCT+AGG | + | chr8_1:50922555-50922574 | Msa1199070:intron | 40.0% |
| CATTGTAATGAGCTTGATCC+CGG | - | chr8_1:50922600-50922619 | None:intergenic | 40.0% | |
| AATGTGATGAACACGAGCAA+AGG | + | chr8_1:50922616-50922635 | Msa1199070:intron | 40.0% | |
| CCATTCCTAGTTCGTGATAA+GGG | - | chr8_1:50922773-50922792 | None:intergenic | 40.0% | |
| TCCATTCCTAGTTCGTGATA+AGG | - | chr8_1:50922774-50922793 | None:intergenic | 40.0% | |
| TCTCTATCGGACAATTGGAA+GGG | - | chr8_1:50923119-50923138 | None:intergenic | 40.0% | |
| ATCTCTATCGGACAATTGGA+AGG | - | chr8_1:50923120-50923139 | None:intergenic | 40.0% | |
| TCGAATCTCTATCGGACAAT+TGG | - | chr8_1:50923124-50923143 | None:intergenic | 40.0% | |
| !!! | AAGTTTTGCGTTGACTATCG+AGG | + | chr8_1:50923146-50923165 | Msa1199070:intron | 40.0% |
| !! | ATTTTCGAGAGGGTTGAGTT+AGG | - | chr8_1:50923172-50923191 | None:intergenic | 40.0% |
| ATATCACTGATGGTTGCTTG+AGG | - | chr8_1:50923303-50923322 | None:intergenic | 40.0% | |
| ATGATAGATGATGCTTCGCA+AGG | + | chr8_1:50923321-50923340 | Msa1199070:CDS | 40.0% | |
| !! | AAAGAGCACCTTGTAATGAG+AGG | - | chr8_1:50923412-50923431 | None:intergenic | 40.0% |
| ! | TTCTCGTTCTCTGAAGGTAA+TGG | + | chr8_1:50923433-50923452 | Msa1199070:intron | 40.0% |
| CGTCCACAGAATTTACCTAA+TGG | + | chr8_1:50923487-50923506 | Msa1199070:intron | 40.0% | |
| ACATATTGCAGCGTGTACAA+TGG | + | chr8_1:50923526-50923545 | Msa1199070:CDS | 40.0% | |
| TTGGAGTCTTTCCCAGATTA+AGG | + | chr8_1:50923592-50923611 | Msa1199070:CDS | 40.0% | |
| AAACAGTTGTGAGGCTGTTT+GGG | - | chr8_1:50924007-50924026 | None:intergenic | 40.0% | |
| TAAACAGTTGTGAGGCTGTT+TGG | - | chr8_1:50924008-50924027 | None:intergenic | 40.0% | |
| TTCTGGCATAAACAGTTGTG+AGG | - | chr8_1:50924016-50924035 | None:intergenic | 40.0% | |
| TACTATGGAAGTGGTCTACT+AGG | - | chr8_1:50924261-50924280 | None:intergenic | 40.0% | |
| ! | ACGGTTTTCTCCTGAAGTAA+TGG | + | chr8_1:50924432-50924451 | Msa1199070:CDS | 40.0% |
| GGATCTTGAACCATTACTTC+AGG | - | chr8_1:50924445-50924464 | None:intergenic | 40.0% | |
| TGTTTCTCTACTACCTCCTA+TGG | + | chr8_1:50924480-50924499 | Msa1199070:CDS | 40.0% | |
| CCATGAAAAAGAACCATAGG+AGG | - | chr8_1:50924496-50924515 | None:intergenic | 40.0% | |
| !! | CCTCCTATGGTTCTTTTTCA+TGG | + | chr8_1:50924493-50924512 | Msa1199070:CDS | 40.0% |
| GTGCCATGAAAAAGAACCAT+AGG | - | chr8_1:50924499-50924518 | None:intergenic | 40.0% | |
| !! | ATGGTTCTTTTTCATGGCAC+CGG | + | chr8_1:50924499-50924518 | Msa1199070:CDS | 40.0% |
| GTCAAACATGTTACAGGTGT+TGG | - | chr8_1:50924691-50924710 | None:intergenic | 40.0% | |
| TTCTTTGCTACGATACACCT+TGG | + | chr8_1:50924745-50924764 | Msa1199070:intron | 40.0% | |
| !! | ATAAGTCTAAGGAGTGTCCA+AGG | - | chr8_1:50924765-50924784 | None:intergenic | 40.0% |
| TATCTCAGACTAGATGGGAT+AGG | + | chr8_1:50924782-50924801 | Msa1199070:intron | 40.0% | |
| ! | AGATGGAGGAAAATTGGCTT+AGG | + | chr8_1:50924911-50924930 | Msa1199070:intron | 40.0% |
| ! | GAAAATTGGCTTAGGTGGTT+TGG | + | chr8_1:50924919-50924938 | Msa1199070:intron | 40.0% |
| GCATGTAGAGAAAAGACCTT+TGG | + | chr8_1:50924942-50924961 | Msa1199070:intron | 40.0% | |
| GACCTTTGGATTCTGTAGTA+AGG | + | chr8_1:50924956-50924975 | Msa1199070:intron | 40.0% | |
| CTCCTTACTACAGAATCCAA+AGG | - | chr8_1:50924961-50924980 | None:intergenic | 40.0% | |
| AAGGAGAGTAGATTAGATGG+AGG | + | chr8_1:50924975-50924994 | Msa1199070:intron | 40.0% | |
| TGACTCCACTTAGTGGAATA+AGG | + | chr8_1:50925134-50925153 | Msa1199070:intron | 40.0% | |
| ! | GACAGGGTATTCAATTTGTG+TGG | + | chr8_1:50925478-50925497 | Msa1199070:intron | 40.0% |
| TTCAGATGGGAAATGCAAAG+TGG | - | chr8_1:50925730-50925749 | None:intergenic | 40.0% | |
| ! | AGCTGTTGCATCTCTAGAAA+GGG | - | chr8_1:50926114-50926133 | None:intergenic | 40.0% |
| CCTAACCACTATGTTCCTAT+TGG | - | chr8_1:50926353-50926372 | None:intergenic | 40.0% | |
| CCAATAGGAACATAGTGGTT+AGG | + | chr8_1:50926350-50926369 | Msa1199070:three_prime_UTR | 40.0% | |
| CAGCGAATGTTGAGATGAGA+TGG | - | chr8_1:50919894-50919913 | None:intergenic | 45.0% | |
| GTTATGGGAAGGATCTGAGA+TGG | - | chr8_1:50919956-50919975 | None:intergenic | 45.0% | |
| GAAGAAAGAGGCTTCTTTGG+TGG | - | chr8_1:50919989-50920008 | None:intergenic | 45.0% | |
| !! | AACAACTCAATTGGTGGTGG+TGG | + | chr8_1:50920148-50920167 | Msa1199070:CDS | 45.0% |
| ! | CAATTAGTGGACGGTGAGAT+TGG | - | chr8_1:50920476-50920495 | None:intergenic | 45.0% |
| CAATCTCACCGTCCACTAAT+TGG | + | chr8_1:50920474-50920493 | Msa1199070:intron | 45.0% | |
| ATCTCACCGTCCACTAATTG+GGG | + | chr8_1:50920476-50920495 | Msa1199070:intron | 45.0% | |
| TTTAATCGGGCCCCAATTAG+TGG | - | chr8_1:50920489-50920508 | None:intergenic | 45.0% | |
| TTCAAACGTCAGACCTTGAG+AGG | + | chr8_1:50920547-50920566 | Msa1199070:intron | 45.0% | |
| GAGCATAACATCCAAGAGCA+AGG | - | chr8_1:50920966-50920985 | None:intergenic | 45.0% | |
| !!! | TATGCTCTGCTGCTTTTACC+AGG | + | chr8_1:50920979-50920998 | Msa1199070:CDS | 45.0% |
| ! | GAGAGAGCGCAATGATAATG+TGG | - | chr8_1:50921769-50921788 | None:intergenic | 45.0% |
| CTGTGCAACCTAAAAACAGG+TGG | - | chr8_1:50921827-50921846 | None:intergenic | 45.0% | |
| CCCTTATCTTGTGCCTGATA+TGG | + | chr8_1:50922076-50922095 | Msa1199070:intron | 45.0% | |
| GATTGCGATTGTGGCTTCAA+CGG | + | chr8_1:50922218-50922237 | Msa1199070:intron | 45.0% | |
| ! | CAATTTCAAGGGGAGTGTAC+TGG | - | chr8_1:50922448-50922467 | None:intergenic | 45.0% |
| GTACACTCCCCTTGAAATTG+AGG | + | chr8_1:50922448-50922467 | Msa1199070:intron | 45.0% | |
| AAGGTTACACTCTCGTGTCT+TGG | - | chr8_1:50922713-50922732 | None:intergenic | 45.0% | |
| GCTTTCCCTTATCACGAACT+AGG | + | chr8_1:50922765-50922784 | Msa1199070:intron | 45.0% | |
| CCCTTATCACGAACTAGGAA+TGG | + | chr8_1:50922770-50922789 | Msa1199070:intron | 45.0% | |
| CTATCGAACAGCTGTAAGAC+CGG | - | chr8_1:50923090-50923109 | None:intergenic | 45.0% | |
| AATATGGAGGTGACCCTAAC+AGG | + | chr8_1:50923373-50923392 | Msa1199070:CDS | 45.0% | |
| GCCCCATTAGGTAAATTCTG+TGG | - | chr8_1:50923493-50923512 | None:intergenic | 45.0% | |
| TATTGCAGCGTGTACAATGG+TGG | + | chr8_1:50923529-50923548 | Msa1199070:CDS | 45.0% | |
| !! | GTGAAGGAGAGAGTACTTCT+TGG | + | chr8_1:50923573-50923592 | Msa1199070:CDS | 45.0% |
| CCACGAGCATATACTATCGT+TGG | - | chr8_1:50923746-50923765 | None:intergenic | 45.0% | |
| CCAACGATAGTATATGCTCG+TGG | + | chr8_1:50923743-50923762 | Msa1199070:intron | 45.0% | |
| ! | AGATGGACTTAGAGCCTGTT+CGG | - | chr8_1:50924060-50924079 | None:intergenic | 45.0% |
| GGACTTAAGGCATGCAAAGA+TGG | - | chr8_1:50924077-50924096 | None:intergenic | 45.0% | |
| GTAGACCACTTCCATAGTAG+AGG | + | chr8_1:50924262-50924281 | Msa1199070:CDS | 45.0% | |
| AACGATAGAGGCCTCTACTA+TGG | - | chr8_1:50924276-50924295 | None:intergenic | 45.0% | |
| ! | TTACAGCATAATGGAAGGGG+AGG | + | chr8_1:50924399-50924418 | Msa1199070:intron | 45.0% |
| AGAGAGAGAGAGAGAGAGTT+GGG | + | chr8_1:50924869-50924888 | Msa1199070:intron | 45.0% | |
| ! | TGGAGGAAAATTGGCTTAGG+TGG | + | chr8_1:50924914-50924933 | Msa1199070:intron | 45.0% |
| ACTAAGTGGAGTCAGCTACA+TGG | - | chr8_1:50925128-50925147 | None:intergenic | 45.0% | |
| ! | ATGTAGCTGACTCCACTTAG+TGG | + | chr8_1:50925127-50925146 | Msa1199070:intron | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | - | chr8_1:50925142-50925161 | None:intergenic | 45.0% |
| CCACTTAGTGGAATAAGGCT+TGG | + | chr8_1:50925139-50925158 | Msa1199070:intron | 45.0% | |
| AAGCTCGTGTGACTTCAGAT+GGG | - | chr8_1:50925743-50925762 | None:intergenic | 45.0% | |
| TTCAAATGCCTCTGCCTTTC+AGG | + | chr8_1:50926016-50926035 | Msa1199070:intron | 45.0% | |
| TGCCTTTCAGGATCCTATGA+GGG | + | chr8_1:50926028-50926047 | Msa1199070:intron | 45.0% | |
| ! | GAGCTGTTGCATCTCTAGAA+AGG | - | chr8_1:50926115-50926134 | None:intergenic | 45.0% |
| !! | AACTCAATTGGTGGTGGTGG+TGG | + | chr8_1:50920151-50920170 | Msa1199070:CDS | 50.0% |
| TCCAATGACTGACTGATCCG+AGG | + | chr8_1:50920448-50920467 | Msa1199070:intron | 50.0% | |
| CCAATGACTGACTGATCCGA+GGG | + | chr8_1:50920449-50920468 | Msa1199070:intron | 50.0% | |
| ACACTCCAAGGATGCCTTTC+TGG | + | chr8_1:50920573-50920592 | Msa1199070:intron | 50.0% | |
| CTTTCATTACTGGTGGAGCC+TGG | + | chr8_1:50921348-50921367 | Msa1199070:CDS | 50.0% | |
| ACTGGTGGAGCCTGGATTAT+TGG | + | chr8_1:50921356-50921375 | Msa1199070:CDS | 50.0% | |
| CTGGTGGAGCCTGGATTATT+GGG | + | chr8_1:50921357-50921376 | Msa1199070:CDS | 50.0% | |
| !! | GTCCCGATCCACCTGTTTTT+AGG | + | chr8_1:50921816-50921835 | Msa1199070:intron | 50.0% |
| CTGCATCGTGATTGCGATTG+TGG | + | chr8_1:50922209-50922228 | Msa1199070:intron | 50.0% | |
| CACGAACTAGGAATGGACAC+TGG | + | chr8_1:50922777-50922796 | Msa1199070:intron | 50.0% | |
| ! | AGCGTGTACAATGGTGGAAC+AGG | + | chr8_1:50923535-50923554 | Msa1199070:CDS | 50.0% |
| GGTGGAACAGGCAATCAAAG+AGG | + | chr8_1:50923547-50923566 | Msa1199070:CDS | 50.0% | |
| GAACAGGCAATCAAAGAGGC+TGG | + | chr8_1:50923551-50923570 | Msa1199070:CDS | 50.0% | |
| GCAATCAAAGAGGCTGGTGA+AGG | + | chr8_1:50923557-50923576 | Msa1199070:CDS | 50.0% | |
| AGAGGCCTCTACTATGGAAG+TGG | - | chr8_1:50924270-50924289 | None:intergenic | 50.0% | |
| GGCTCGAACCTTTGATCTGA+CGG | - | chr8_1:50924538-50924557 | None:intergenic | 50.0% | |
| AGGTTCGAGCCTCTTTCATG+AGG | + | chr8_1:50924547-50924566 | Msa1199070:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGT+TGG | + | chr8_1:50924868-50924887 | Msa1199070:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGTTG+GGG | + | chr8_1:50924870-50924889 | Msa1199070:intron | 50.0% | |
| CAAGCTCGTGTGACTTCAGA+TGG | - | chr8_1:50925744-50925763 | None:intergenic | 50.0% | |
| CATAGGATCCTGAAAGGCAG+AGG | - | chr8_1:50926027-50926046 | None:intergenic | 50.0% | |
| CTGCCTTTCAGGATCCTATG+AGG | + | chr8_1:50926027-50926046 | Msa1199070:intron | 50.0% | |
| GCCTTTCAGGATCCTATGAG+GGG | + | chr8_1:50926029-50926048 | Msa1199070:intron | 50.0% | |
| ACCCCTCATAGGATCCTGAA+AGG | - | chr8_1:50926033-50926052 | None:intergenic | 50.0% | |
| TTTCAGGATCCTATGAGGGG+TGG | + | chr8_1:50926032-50926051 | Msa1199070:intron | 50.0% | |
| TCATCATCTCCACCCCTCAT+AGG | - | chr8_1:50926044-50926063 | None:intergenic | 50.0% | |
| ! | TGCATCTCTAGAAAGGGCCT+CGG | - | chr8_1:50926108-50926127 | None:intergenic | 50.0% |
| CAACAGCTCCTCCAAGGAAA+CGG | + | chr8_1:50926126-50926145 | Msa1199070:CDS | 50.0% | |
| TCCAAGGAAACGGCTTGTAC+CGG | + | chr8_1:50926136-50926155 | Msa1199070:CDS | 50.0% | |
| !! | TCAATTGGTGGTGGTGGTGG+TGG | + | chr8_1:50920154-50920173 | Msa1199070:CDS | 55.0% |
| CCCTCGGATCAGTCAGTCAT+TGG | - | chr8_1:50920452-50920471 | None:intergenic | 55.0% | |
| ATCGGGCCCCAATTAGTGGA+CGG | - | chr8_1:50920485-50920504 | None:intergenic | 55.0% | |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr8_1:50920563-50920582 | None:intergenic | 55.0% | |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr8_1:50920561-50920580 | Msa1199070:intron | 55.0% |
| !! | GGATGCCAGAAAGGCATCCT+TGG | - | chr8_1:50920581-50920600 | None:intergenic | 55.0% |
| TACCTAATGGGGCAGTCAGC+TGG | + | chr8_1:50923500-50923519 | Msa1199070:CDS | 55.0% | |
| ACCTAATGGGGCAGTCAGCT+GGG | + | chr8_1:50923501-50923520 | Msa1199070:CDS | 55.0% | |
| AAGGGGAGGAATCACTGCGA+CGG | + | chr8_1:50924413-50924432 | Msa1199070:CDS | 55.0% | |
| TATTCATGCTGGCGATGCCG+AGG | + | chr8_1:50926088-50926107 | Msa1199070:CDS | 55.0% | |
| GAGATGCAACAGCTCCTCCA+AGG | + | chr8_1:50926120-50926139 | Msa1199070:CDS | 55.0% | |
| GGTACAAGCCGTTTCCTTGG+AGG | - | chr8_1:50926137-50926156 | None:intergenic | 55.0% | |
| TCCGGTACAAGCCGTTTCCT+TGG | - | chr8_1:50926140-50926159 | None:intergenic | 55.0% | |
| !! | ATTGGTGGTGGTGGTGGTGG+TGG | + | chr8_1:50920157-50920176 | Msa1199070:CDS | 60.0% |
| ! | GGACGGTGAGATTGGTCCCT+CGG | - | chr8_1:50920468-50920487 | None:intergenic | 60.0% |
| CCTAATGGGGCAGTCAGCTG+GGG | + | chr8_1:50923502-50923521 | Msa1199070:CDS | 60.0% | |
| !! | GTGGTGGTGGTGGTGGTGGT+GGG | + | chr8_1:50920161-50920180 | Msa1199070:CDS | 65.0% |
| !! | TGGTGGTGGTGGTGGTGGTG+GGG | + | chr8_1:50920159-50920178 | Msa1199070:CDS | 65.0% |
| CCCCAGCTGACTGCCCCATT+AGG | - | chr8_1:50923505-50923524 | None:intergenic | 65.0% | |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr8_1:50920160-50920179 | Msa1199070:CDS | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr8_1:50920160-50920179 | Msa1199070:CDS | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+GGG | + | chr8_1:50920160-50920179 | Msa1199070:CDS | 70.0% |
| !! | GGTGGTGGTGGTGGTGGGGG+TGG | + | chr8_1:50920169-50920188 | Msa1199070:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 50919831 | 50926553 | 50919831 | ID=Msa1199070;Name=Msa1199070 |
| chr8_1 | mRNA | 50919831 | 50926553 | 50919831 | ID=Msa1199070-mRNA-1;Parent=Msa1199070;Name=Msa1199070-mRNA-1;_AED=0.09;_eAED=0.09;_QI=119|1|1|1|1|1|11|354|473 |
| chr8_1 | exon | 50919831 | 50920362 | 50919831 | ID=Msa1199070-mRNA-1:exon:16071;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50920936 | 50921012 | 50920936 | ID=Msa1199070-mRNA-1:exon:16072;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50921148 | 50921217 | 50921148 | ID=Msa1199070-mRNA-1:exon:16073;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50921298 | 50921378 | 50921298 | ID=Msa1199070-mRNA-1:exon:16074;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50921558 | 50921632 | 50921558 | ID=Msa1199070-mRNA-1:exon:16075;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50923293 | 50923394 | 50923293 | ID=Msa1199070-mRNA-1:exon:16076;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50923496 | 50923636 | 50923496 | ID=Msa1199070-mRNA-1:exon:16077;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50924243 | 50924308 | 50924243 | ID=Msa1199070-mRNA-1:exon:16078;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50924405 | 50924548 | 50924405 | ID=Msa1199070-mRNA-1:exon:16079;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50925628 | 50925718 | 50925628 | ID=Msa1199070-mRNA-1:exon:16080;Parent=Msa1199070-mRNA-1 |
| chr8_1 | exon | 50926038 | 50926553 | 50926038 | ID=Msa1199070-mRNA-1:exon:16081;Parent=Msa1199070-mRNA-1 |
| chr8_1 | five_prime_UTR | 50919831 | 50919949 | 50919831 | ID=Msa1199070-mRNA-1:five_prime_utr;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50919950 | 50920362 | 50919950 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50920936 | 50921012 | 50920936 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50921148 | 50921217 | 50921148 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50921298 | 50921378 | 50921298 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50921558 | 50921632 | 50921558 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50923293 | 50923394 | 50923293 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50923496 | 50923636 | 50923496 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50924243 | 50924308 | 50924243 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50924405 | 50924548 | 50924405 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50925628 | 50925718 | 50925628 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | CDS | 50926038 | 50926199 | 50926038 | ID=Msa1199070-mRNA-1:cds;Parent=Msa1199070-mRNA-1 |
| chr8_1 | three_prime_UTR | 50926200 | 50926553 | 50926200 | ID=Msa1199070-mRNA-1:three_prime_utr;Parent=Msa1199070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
