Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857890 | XP_003616526.1 | 90.879 | 614 | 18 | 1 | 1 | 614 | 1 | 576 | 0.0 | 1087 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857890 | sp|F4K295|ROGF5_ARATH | 57.904 | 544 | 179 | 9 | 42 | 575 | 63 | 566 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857890 | F6LPU5 | 90.879 | 614 | 18 | 1 | 1 | 614 | 1 | 576 | 0.0 | 1087 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa0857890 | 0.808024 | 3.794818e-50 | -8.615850e-47 |
| Msa0016040 | Msa0857890 | 0.825679 | 4.110166e-54 | -8.615850e-47 |
| Msa0016530 | Msa0857890 | 0.802586 | 5.229254e-49 | -8.615850e-47 |
| Msa0020540 | Msa0857890 | 0.851854 | 6.766835e-61 | -8.615850e-47 |
| Msa0030070 | Msa0857890 | 0.803761 | 2.987910e-49 | -8.615850e-47 |
| Msa0032970 | Msa0857890 | 0.841675 | 4.115157e-58 | -8.615850e-47 |
| Msa0032980 | Msa0857890 | 0.857724 | 1.342914e-62 | -8.615850e-47 |
| Msa0040640 | Msa0857890 | 0.829424 | 5.187261e-55 | -8.615850e-47 |
| Msa0062340 | Msa0857890 | 0.814719 | 1.335057e-51 | -8.615850e-47 |
| Msa0067380 | Msa0857890 | 0.834828 | 2.391457e-56 | -8.615850e-47 |
| Msa0075530 | Msa0857890 | 0.802400 | 5.711854e-49 | -8.615850e-47 |
| Msa0078130 | Msa0857890 | 0.827358 | 1.635389e-54 | -8.615850e-47 |
| Msa0091350 | Msa0857890 | 0.853169 | 2.854928e-61 | -8.615850e-47 |
| Msa0093860 | Msa0857890 | 0.806335 | 8.647265e-50 | -8.615850e-47 |
| Msa0106630 | Msa0857890 | 0.807744 | 4.351984e-50 | -8.615850e-47 |
| Msa0112670 | Msa0857890 | 0.801433 | 9.024131e-49 | -8.615850e-47 |
| Msa0607800 | Msa0857890 | 0.822428 | 2.381136e-53 | -8.615850e-47 |
| Msa0608350 | Msa0857890 | 0.846324 | 2.332522e-59 | -8.615850e-47 |
| Msa0612520 | Msa0857890 | 0.800517 | 1.388717e-48 | -8.615850e-47 |
| Msa0613580 | Msa0857890 | 0.811404 | 7.119695e-51 | -8.615850e-47 |
| Msa0613630 | Msa0857890 | 0.859908 | 2.985412e-63 | -8.615850e-47 |
| Msa0620500 | Msa0857890 | 0.827887 | 1.220405e-54 | -8.615850e-47 |
| Msa0621710 | Msa0857890 | 0.829733 | 4.363110e-55 | -8.615850e-47 |
| Msa0622920 | Msa0857890 | 0.817660 | 2.938262e-52 | -8.615850e-47 |
| Msa0645340 | Msa0857890 | 0.800383 | 1.479132e-48 | -8.615850e-47 |
| Msa0647440 | Msa0857890 | 0.822612 | 2.158326e-53 | -8.615850e-47 |
| Msa0648040 | Msa0857890 | 0.818966 | 1.487742e-52 | -8.615850e-47 |
| Msa0648760 | Msa0857890 | 0.848204 | 7.112451e-60 | -8.615850e-47 |
| Msa0654740 | Msa0857890 | 0.803616 | 3.201716e-49 | -8.615850e-47 |
| Msa0657210 | Msa0857890 | 0.834269 | 3.304014e-56 | -8.615850e-47 |
| Msa0687090 | Msa0857890 | 0.818885 | 1.552236e-52 | -8.615850e-47 |
| Msa0690320 | Msa0857890 | 0.831530 | 1.584160e-55 | -8.615850e-47 |
| Msa0690740 | Msa0857890 | 0.816794 | 4.601363e-52 | -8.615850e-47 |
| Msa0691270 | Msa0857890 | 0.850364 | 1.780693e-60 | -8.615850e-47 |
| Msa0695560 | Msa0857890 | 0.806642 | 7.450387e-50 | -8.615850e-47 |
| Msa0700500 | Msa0857890 | 0.819341 | 1.222013e-52 | -8.615850e-47 |
| Msa0701250 | Msa0857890 | 0.835243 | 1.879078e-56 | -8.615850e-47 |
| Msa0709440 | Msa0857890 | 0.810389 | 1.181023e-50 | -8.615850e-47 |
| Msa0713920 | Msa0857890 | 0.815826 | 7.575382e-52 | -8.615850e-47 |
| Msa0714520 | Msa0857890 | 0.870741 | 1.160370e-66 | -8.615850e-47 |
| Msa0717900 | Msa0857890 | 0.830762 | 2.447110e-55 | -8.615850e-47 |
| Msa0722220 | Msa0857890 | 0.845885 | 3.072610e-59 | -8.615850e-47 |
| Msa0737990 | Msa0857890 | 0.842022 | 3.331678e-58 | -8.615850e-47 |
| Msa0743440 | Msa0857890 | 0.842324 | 2.771430e-58 | -8.615850e-47 |
| Msa0745720 | Msa0857890 | 0.835651 | 1.482236e-56 | -8.615850e-47 |
| Msa0763550 | Msa0857890 | 0.852770 | 3.713047e-61 | -8.615850e-47 |
| Msa0769730 | Msa0857890 | 0.807514 | 4.871320e-50 | -8.615850e-47 |
| Msa0773630 | Msa0857890 | 0.803957 | 2.719665e-49 | -8.615850e-47 |
| Msa0785240 | Msa0857890 | 0.851853 | 6.769110e-61 | -8.615850e-47 |
| Msa0805680 | Msa0857890 | 0.838488 | 2.791757e-57 | -8.615850e-47 |
| Msa0807160 | Msa0857890 | 0.811326 | 7.403941e-51 | -8.615850e-47 |
| Msa0811020 | Msa0857890 | 0.817231 | 3.670829e-52 | -8.615850e-47 |
| Msa0816080 | Msa0857890 | 0.824792 | 6.663365e-54 | -8.615850e-47 |
| Msa0817360 | Msa0857890 | 0.920076 | 2.022405e-87 | -8.615850e-47 |
| Msa0821160 | Msa0857890 | 0.808798 | 2.594992e-50 | -8.615850e-47 |
| Msa0835350 | Msa0857890 | 0.812346 | 4.441286e-51 | -8.615850e-47 |
| Msa0837680 | Msa0857890 | 0.803278 | 3.762328e-49 | -8.615850e-47 |
| Msa0122330 | Msa0857890 | 0.806739 | 7.106156e-50 | -8.615850e-47 |
| Msa0123320 | Msa0857890 | 0.802740 | 4.860801e-49 | -8.615850e-47 |
| Msa0125590 | Msa0857890 | 0.806748 | 7.076672e-50 | -8.615850e-47 |
| Msa0127340 | Msa0857890 | 0.839298 | 1.722479e-57 | -8.615850e-47 |
| Msa0127680 | Msa0857890 | 0.801321 | 9.515624e-49 | -8.615850e-47 |
| Msa0140380 | Msa0857890 | 0.840213 | 9.956191e-58 | -8.615850e-47 |
| Msa0153210 | Msa0857890 | 0.811865 | 5.653853e-51 | -8.615850e-47 |
| Msa0156050 | Msa0857890 | 0.813136 | 2.981543e-51 | -8.615850e-47 |
| Msa0156090 | Msa0857890 | 0.808768 | 2.633502e-50 | -8.615850e-47 |
| Msa0159590 | Msa0857890 | 0.842481 | 2.518720e-58 | -8.615850e-47 |
| Msa0159620 | Msa0857890 | 0.822640 | 2.126080e-53 | -8.615850e-47 |
| Msa0161930 | Msa0857890 | 0.810824 | 9.513560e-51 | -8.615850e-47 |
| Msa0165830 | Msa0857890 | 0.853683 | 2.032593e-61 | -8.615850e-47 |
| Msa0165840 | Msa0857890 | 0.819278 | 1.263440e-52 | -8.615850e-47 |
| Msa0170070 | Msa0857890 | 0.815105 | 1.096233e-51 | -8.615850e-47 |
| Msa0184700 | Msa0857890 | 0.830113 | 3.526097e-55 | -8.615850e-47 |
| Msa0232760 | Msa0857890 | 0.865175 | 7.143584e-65 | -8.615850e-47 |
| Msa0233020 | Msa0857890 | 0.823454 | 1.373335e-53 | -8.615850e-47 |
| Msa0368860 | Msa0857890 | 0.834334 | 3.182376e-56 | -8.615850e-47 |
| Msa0373170 | Msa0857890 | 0.825412 | 4.753691e-54 | -8.615850e-47 |
| Msa0373590 | Msa0857890 | 0.820261 | 7.532857e-53 | -8.615850e-47 |
| Msa0383000 | Msa0857890 | 0.840294 | 9.483270e-58 | -8.615850e-47 |
| Msa0400950 | Msa0857890 | 0.803332 | 3.666451e-49 | -8.615850e-47 |
| Msa0412130 | Msa0857890 | 0.814979 | 1.168912e-51 | -8.615850e-47 |
| Msa0416160 | Msa0857890 | 0.835892 | 1.288095e-56 | -8.615850e-47 |
| Msa0420430 | Msa0857890 | 0.824270 | 8.840630e-54 | -8.615850e-47 |
| Msa0420670 | Msa0857890 | 0.812417 | 4.283850e-51 | -8.615850e-47 |
| Msa0421750 | Msa0857890 | 0.836018 | 1.196374e-56 | -8.615850e-47 |
| Msa0432010 | Msa0857890 | 0.820881 | 5.426415e-53 | -8.615850e-47 |
| Msa0433150 | Msa0857890 | 0.836537 | 8.832498e-57 | -8.615850e-47 |
| Msa0433760 | Msa0857890 | 0.865432 | 5.931482e-65 | -8.615850e-47 |
| Msa0447750 | Msa0857890 | 0.817906 | 2.586038e-52 | -8.615850e-47 |
| Msa0462780 | Msa0857890 | 0.815105 | 1.096117e-51 | -8.615850e-47 |
| Msa0466520 | Msa0857890 | 0.859705 | 3.436974e-63 | -8.615850e-47 |
| Msa0467690 | Msa0857890 | 0.830656 | 2.597449e-55 | -8.615850e-47 |
| Msa0477630 | Msa0857890 | 0.858406 | 8.422647e-63 | -8.615850e-47 |
| Msa0480730 | Msa0857890 | 0.849748 | 2.649181e-60 | -8.615850e-47 |
| Msa0481890 | Msa0857890 | 0.813741 | 2.195308e-51 | -8.615850e-47 |
| Msa0272260 | Msa0857890 | 0.835764 | 1.387332e-56 | -8.615850e-47 |
| Msa0281540 | Msa0857890 | 0.824418 | 8.157736e-54 | -8.615850e-47 |
| Msa0320580 | Msa0857890 | 0.830002 | 3.752988e-55 | -8.615850e-47 |
| Msa0341680 | Msa0857890 | 0.822337 | 2.500260e-53 | -8.615850e-47 |
| Msa0344110 | Msa0857890 | 0.829068 | 6.328465e-55 | -8.615850e-47 |
| Msa0353950 | Msa0857890 | 0.827497 | 1.514638e-54 | -8.615850e-47 |
| Msa0358680 | Msa0857890 | 0.802440 | 5.603641e-49 | -8.615850e-47 |
| Msa0512530 | Msa0857890 | 0.803470 | 3.433043e-49 | -8.615850e-47 |
| Msa0513080 | Msa0857890 | 0.856082 | 4.091447e-62 | -8.615850e-47 |
| Msa0514020 | Msa0857890 | 0.828491 | 8.729518e-55 | -8.615850e-47 |
| Msa0520870 | Msa0857890 | 0.833496 | 5.157397e-56 | -8.615850e-47 |
| Msa0521680 | Msa0857890 | 0.871472 | 6.661411e-67 | -8.615850e-47 |
| Msa0524430 | Msa0857890 | 0.802048 | 6.750505e-49 | -8.615850e-47 |
| Msa0524520 | Msa0857890 | 0.806999 | 6.261553e-50 | -8.615850e-47 |
| Msa0527850 | Msa0857890 | 0.814383 | 1.584285e-51 | -8.615850e-47 |
| Msa0531960 | Msa0857890 | 0.801268 | 9.755403e-49 | -8.615850e-47 |
| Msa0541740 | Msa0857890 | 0.836526 | 8.885571e-57 | -8.615850e-47 |
| Msa0553750 | Msa0857890 | 0.816642 | 4.977391e-52 | -8.615850e-47 |
| Msa0554300 | Msa0857890 | 0.828082 | 1.095211e-54 | -8.615850e-47 |
| Msa0559100 | Msa0857890 | 0.813902 | 2.023507e-51 | -8.615850e-47 |
| Msa0561560 | Msa0857890 | 0.819166 | 1.339658e-52 | -8.615850e-47 |
| Msa0563740 | Msa0857890 | 0.820509 | 6.606509e-53 | -8.615850e-47 |
| Msa0563900 | Msa0857890 | 0.819350 | 1.216091e-52 | -8.615850e-47 |
| Msa0563980 | Msa0857890 | 0.807567 | 4.746348e-50 | -8.615850e-47 |
| Msa0564980 | Msa0857890 | 0.822086 | 2.859286e-53 | -8.615850e-47 |
| Msa0569530 | Msa0857890 | 0.811059 | 8.458311e-51 | -8.615850e-47 |
| Msa0572830 | Msa0857890 | 0.801336 | 9.445593e-49 | -8.615850e-47 |
| Msa0577280 | Msa0857890 | 0.817518 | 3.163112e-52 | -8.615850e-47 |
| Msa0577330 | Msa0857890 | 0.821088 | 4.861080e-53 | -8.615850e-47 |
| Msa0577450 | Msa0857890 | 0.823705 | 1.199250e-53 | -8.615850e-47 |
| Msa0577820 | Msa0857890 | 0.802849 | 4.615869e-49 | -8.615850e-47 |
| Msa0580810 | Msa0857890 | 0.807806 | 4.221540e-50 | -8.615850e-47 |
| Msa0581840 | Msa0857890 | 0.804570 | 2.027796e-49 | -8.615850e-47 |
| Msa0582460 | Msa0857890 | 0.809927 | 1.485228e-50 | -8.615850e-47 |
| Msa0586200 | Msa0857890 | 0.812183 | 4.819823e-51 | -8.615850e-47 |
| Msa0857800 | Msa0857890 | 0.856904 | 2.347204e-62 | -8.615850e-47 |
| Msa0857890 | Msa0861440 | 0.809816 | 1.569708e-50 | -8.615850e-47 |
| Msa0857890 | Msa0863620 | 0.850435 | 1.701141e-60 | -8.615850e-47 |
| Msa0857890 | Msa0867110 | 0.830552 | 2.754511e-55 | -8.615850e-47 |
| Msa0857890 | Msa0879920 | 0.837962 | 3.813936e-57 | -8.615850e-47 |
| Msa0857890 | Msa0897790 | 0.816178 | 6.321420e-52 | -8.615850e-47 |
| Msa0857890 | Msa0900760 | 0.800077 | 1.706721e-48 | -8.615850e-47 |
| Msa0857890 | Msa0909760 | 0.806337 | 8.638730e-50 | -8.615850e-47 |
| Msa0857890 | Msa0924430 | 0.844038 | 9.679710e-59 | -8.615850e-47 |
| Msa0857890 | Msa0931590 | 0.837775 | 4.260292e-57 | -8.615850e-47 |
| Msa0857890 | Msa0989370 | 0.830115 | 3.521118e-55 | -8.615850e-47 |
| Msa0857890 | Msa1008670 | 0.813477 | 2.509073e-51 | -8.615850e-47 |
| Msa0857890 | Msa1035570 | 0.812034 | 5.194700e-51 | -8.615850e-47 |
| Msa0857890 | Msa1035610 | 0.809479 | 1.854309e-50 | -8.615850e-47 |
| Msa0857890 | Msa1059020 | 0.823534 | 1.315564e-53 | -8.615850e-47 |
| Msa0857890 | Msa1060900 | 0.817021 | 4.093131e-52 | -8.615850e-47 |
| Msa0857890 | Msa1078030 | 0.806242 | 9.047546e-50 | -8.615850e-47 |
| Msa0857890 | Msa1078860 | 0.804796 | 1.818949e-49 | -8.615850e-47 |
| Msa0857890 | Msa1078990 | 0.802138 | 6.466558e-49 | -8.615850e-47 |
| Msa0857890 | Msa1079640 | 0.829032 | 6.459592e-55 | -8.615850e-47 |
| Msa0857890 | Msa1082380 | 0.828462 | 8.872375e-55 | -8.615850e-47 |
| Msa0857890 | Msa1084530 | 0.812681 | 3.751763e-51 | -8.615850e-47 |
| Msa0857890 | Msa1104220 | 0.842710 | 2.190302e-58 | -8.615850e-47 |
| Msa0857890 | Msa1106220 | 0.816048 | 6.760883e-52 | -8.615850e-47 |
| Msa0857890 | Msa1114630 | 0.812475 | 4.160900e-51 | -8.615850e-47 |
| Msa0857890 | Msa1116190 | 0.809031 | 2.313056e-50 | -8.615850e-47 |
| Msa0857890 | Msa1116660 | 0.813878 | 2.047864e-51 | -8.615850e-47 |
| Msa0857890 | Msa1116740 | 0.810420 | 1.162776e-50 | -8.615850e-47 |
| Msa0857890 | Msa1124470 | 0.811546 | 6.631070e-51 | -8.615850e-47 |
| Msa0857890 | Msa1125820 | 0.823023 | 1.731117e-53 | -8.615850e-47 |
| Msa0857890 | Msa1125990 | 0.814651 | 1.382450e-51 | -8.615850e-47 |
| Msa0857890 | Msa1127280 | 0.820892 | 5.394939e-53 | -8.615850e-47 |
| Msa0857890 | Msa1127470 | 0.822411 | 2.403594e-53 | -8.615850e-47 |
| Msa0857890 | Msa1148630 | 0.830486 | 2.858524e-55 | -8.615850e-47 |
| Msa0857890 | Msa1149450 | 0.801688 | 8.003189e-49 | -8.615850e-47 |
| Msa0857890 | Msa1159590 | 0.825852 | 3.738893e-54 | -8.615850e-47 |
| Msa0857890 | Msa1162180 | 0.815954 | 7.093852e-52 | -8.615850e-47 |
| Msa0857890 | Msa1162880 | 0.827648 | 1.392825e-54 | -8.615850e-47 |
| Msa0857890 | Msa1165480 | 0.816491 | 5.380936e-52 | -8.615850e-47 |
| Msa0857890 | Msa1171290 | 0.806407 | 8.349236e-50 | -8.615850e-47 |
| Msa0857890 | Msa1176590 | 0.802353 | 5.841831e-49 | -8.615850e-47 |
| Msa0857890 | Msa1183910 | 0.804832 | 1.787881e-49 | -8.615850e-47 |
| Msa0857890 | Msa1188790 | 0.803130 | 4.036749e-49 | -8.615850e-47 |
| Msa0857890 | Msa1201540 | 0.838836 | 2.269859e-57 | -8.615850e-47 |
| Msa0857890 | Msa1211640 | 0.807468 | 4.980205e-50 | -8.615850e-47 |
| Msa0857890 | Msa1213830 | 0.863160 | 3.034805e-64 | -8.615850e-47 |
| Msa0857890 | Msa1214350 | 0.846218 | 2.493745e-59 | -8.615850e-47 |
| Msa0857890 | Msa1215980 | 0.828190 | 1.032033e-54 | -8.615850e-47 |
| Msa0857890 | Msa1217230 | 0.803578 | 3.260218e-49 | -8.615850e-47 |
| Msa0857890 | Msa1218820 | 0.827641 | 1.398253e-54 | -8.615850e-47 |
| Msa0857890 | Msa1223390 | 0.831390 | 1.715077e-55 | -8.615850e-47 |
| Msa0857890 | Msa1228630 | 0.817098 | 3.931717e-52 | -8.615850e-47 |
| Msa0857890 | Msa1252790 | 0.822646 | 2.119001e-53 | -8.615850e-47 |
| Msa0857890 | Msa1254420 | 0.801590 | 8.379893e-49 | -8.615850e-47 |
| Msa0857890 | Msa1254540 | 0.857823 | 1.255474e-62 | -8.615850e-47 |
| Msa0857890 | Msa1261050 | 0.832746 | 7.930349e-56 | -8.615850e-47 |
| Msa0857890 | Msa1263740 | 0.868747 | 5.189781e-66 | -8.615850e-47 |
| Msa0857890 | Msa1263780 | 0.854155 | 1.486295e-61 | -8.615850e-47 |
| Msa0857890 | Msa1263900 | 0.805580 | 1.246434e-49 | -8.615850e-47 |
| Msa0857890 | Msa1267930 | 0.834234 | 3.371654e-56 | -8.615850e-47 |
| Msa0857890 | Msa1268540 | 0.800731 | 1.255836e-48 | -8.615850e-47 |
| Msa0857890 | Msa1279120 | 0.820712 | 5.932924e-53 | -8.615850e-47 |
| Msa0857890 | Msa1294460 | 0.860041 | 2.723331e-63 | -8.615850e-47 |
| Msa0857890 | Msa1294790 | 0.838072 | 3.572993e-57 | -8.615850e-47 |
| Msa0857890 | Msa1300460 | 0.860715 | 1.703066e-63 | -8.615850e-47 |
| Msa0857890 | Msa1305780 | 0.804469 | 2.128159e-49 | -8.615850e-47 |
| Msa0857890 | Msa1305920 | 0.864991 | 8.160583e-65 | -8.615850e-47 |
| Msa0857890 | Msa1306790 | 0.815084 | 1.107953e-51 | -8.615850e-47 |
| Msa0857890 | Msa1308850 | 0.807182 | 5.727442e-50 | -8.615850e-47 |
| Msa0857890 | Msa1321530 | 0.808403 | 3.151501e-50 | -8.615850e-47 |
| Msa0857890 | Msa1332950 | 0.850178 | 2.008599e-60 | -8.615850e-47 |
| Msa0857890 | Msa1338210 | 0.825079 | 5.699576e-54 | -8.615850e-47 |
| Msa0857890 | Msa1339170 | 0.814254 | 1.691433e-51 | -8.615850e-47 |
| Msa0857890 | Msa1342810 | 0.815893 | 7.319824e-52 | -8.615850e-47 |
| Msa0857890 | Msa1361930 | 0.806669 | 7.352664e-50 | -8.615850e-47 |
| Msa0857890 | Msa1362130 | 0.827995 | 1.149884e-54 | -8.615850e-47 |
| Msa0857890 | Msa1364410 | 0.808699 | 2.723991e-50 | -8.615850e-47 |
| Msa0857890 | Msa1365500 | 0.833036 | 6.715703e-56 | -8.615850e-47 |
| Msa0857890 | Msa1367180 | 0.800025 | 1.748586e-48 | -8.615850e-47 |
| Msa0857890 | Msa1368750 | 0.826538 | 2.567576e-54 | -8.615850e-47 |
| Msa0857890 | Msa1374790 | 0.821995 | 3.000771e-53 | -8.615850e-47 |
| Msa0857890 | Msa1381470 | 0.856708 | 2.679888e-62 | -8.615850e-47 |
| Msa0857890 | Msa1384150 | 0.826539 | 2.566082e-54 | -8.615850e-47 |
| Msa0857890 | Msa1387440 | 0.808593 | 2.869608e-50 | -8.615850e-47 |
| Msa0857890 | Msa1387500 | 0.802383 | 5.759009e-49 | -8.615850e-47 |
| Msa0857890 | Msa1389820 | 0.816408 | 5.617378e-52 | -8.615850e-47 |
| Msa0857890 | Msa1400010 | 0.806279 | 8.884920e-50 | -8.615850e-47 |
| Msa0857890 | Msa1400710 | 0.800078 | 1.706016e-48 | -8.615850e-47 |
| Msa0857890 | Msa1406720 | 0.855157 | 7.617370e-62 | -8.615850e-47 |
| Msa0857890 | Msa1424590 | 0.800895 | 1.162932e-48 | -8.615850e-47 |
| Msa0857890 | Msa1426320 | 0.800694 | 1.277806e-48 | -8.615850e-47 |
| Msa0857890 | Msa1434640 | 0.816360 | 5.756722e-52 | -8.615850e-47 |
| Msa0857890 | Msa1435960 | 0.808548 | 2.934685e-50 | -8.615850e-47 |
| Msa0857890 | Msa1442260 | 0.800643 | 1.308727e-48 | -8.615850e-47 |
| Msa0857890 | Msa1445120 | 0.800326 | 1.518641e-48 | -8.615850e-47 |
| Msa0857890 | Msa1450190 | 0.833194 | 6.135734e-56 | -8.615850e-47 |
| Msa0857890 | Msa1451820 | 0.823061 | 1.696588e-53 | -8.615850e-47 |
| Msa0857890 | Msa1457840 | 0.848110 | 7.550028e-60 | -8.615850e-47 |
| Msa0857890 | Msa1465360 | 0.807040 | 6.138984e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857890 | MtrunA17_Chr5g0436141 | 90.879 | 614 | 18 | 1 | 1 | 614 | 1 | 576 | 0.0 | 1087 |
| Msa0857890 | MtrunA17_Chr3g0112731 | 64.130 | 644 | 146 | 15 | 1 | 610 | 1 | 593 | 0.0 | 753 |
| Msa0857890 | MtrunA17_Chr7g0240501 | 60.404 | 495 | 153 | 3 | 84 | 577 | 186 | 638 | 0.0 | 612 |
| Msa0857890 | MtrunA17_Chr4g0008771 | 57.660 | 470 | 151 | 4 | 42 | 507 | 54 | 479 | 0.0 | 527 |
| Msa0857890 | MtrunA17_Chr4g0038651 | 56.404 | 406 | 137 | 2 | 84 | 489 | 89 | 454 | 3.47e-156 | 460 |
| Msa0857890 | MtrunA17_Chr8g0348921 | 51.332 | 413 | 142 | 5 | 84 | 483 | 99 | 465 | 1.08e-130 | 391 |
| Msa0857890 | MtrunA17_Chr7g0247761 | 47.807 | 456 | 136 | 5 | 84 | 483 | 115 | 524 | 2.67e-124 | 377 |
| Msa0857890 | MtrunA17_Chr4g0004771 | 45.813 | 406 | 161 | 5 | 84 | 488 | 92 | 439 | 1.57e-121 | 370 |
| Msa0857890 | MtrunA17_Chr6g0485861 | 45.327 | 428 | 168 | 7 | 84 | 502 | 98 | 468 | 2.23e-120 | 368 |
| Msa0857890 | MtrunA17_Chr2g0331631 | 44.638 | 401 | 165 | 5 | 84 | 483 | 88 | 432 | 1.00e-114 | 352 |
| Msa0857890 | MtrunA17_Chr5g0408591 | 42.298 | 409 | 188 | 4 | 75 | 483 | 111 | 471 | 1.29e-100 | 317 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857890 | AT5G05940.1 | 57.904 | 544 | 179 | 9 | 42 | 575 | 63 | 566 | 0.0 | 602 |
| Msa0857890 | AT5G02010.1 | 64.747 | 434 | 106 | 5 | 63 | 493 | 52 | 441 | 0.0 | 575 |
| Msa0857890 | AT5G05940.2 | 59.564 | 413 | 124 | 4 | 42 | 451 | 63 | 435 | 1.56e-169 | 492 |
| Msa0857890 | AT3G55660.1 | 49.822 | 562 | 198 | 10 | 42 | 572 | 71 | 579 | 6.05e-168 | 491 |
| Msa0857890 | AT4G38430.1 | 51.820 | 467 | 171 | 6 | 67 | 529 | 80 | 496 | 3.70e-156 | 460 |
| Msa0857890 | AT3G55660.2 | 54.327 | 416 | 135 | 6 | 42 | 451 | 71 | 437 | 4.06e-145 | 427 |
| Msa0857890 | AT4G00460.2 | 51.415 | 424 | 153 | 6 | 74 | 490 | 96 | 473 | 1.99e-135 | 404 |
| Msa0857890 | AT4G00460.4 | 51.415 | 424 | 153 | 6 | 74 | 490 | 96 | 473 | 1.99e-135 | 404 |
| Msa0857890 | AT1G01700.1 | 52.415 | 414 | 144 | 6 | 77 | 483 | 111 | 478 | 1.48e-132 | 397 |
| Msa0857890 | AT1G01700.4 | 48.874 | 444 | 144 | 7 | 77 | 483 | 111 | 508 | 2.10e-126 | 382 |
| Msa0857890 | AT3G24620.1 | 47.146 | 403 | 155 | 5 | 84 | 485 | 87 | 432 | 8.83e-125 | 379 |
| Msa0857890 | AT2G45890.1 | 48.201 | 417 | 157 | 8 | 84 | 490 | 95 | 462 | 1.91e-120 | 365 |
| Msa0857890 | AT4G13240.1 | 44.938 | 405 | 165 | 5 | 84 | 487 | 76 | 423 | 4.01e-118 | 361 |
| Msa0857890 | AT1G52240.1 | 46.305 | 406 | 157 | 6 | 84 | 488 | 106 | 451 | 2.12e-114 | 352 |
| Msa0857890 | AT1G79860.1 | 44.389 | 401 | 164 | 6 | 84 | 483 | 94 | 436 | 1.70e-113 | 349 |
| Msa0857890 | AT4G00460.3 | 49.077 | 379 | 140 | 6 | 119 | 490 | 8 | 340 | 2.35e-113 | 342 |
| Msa0857890 | AT1G01700.3 | 50.000 | 386 | 147 | 7 | 77 | 455 | 111 | 457 | 6.14e-113 | 346 |
| Msa0857890 | AT3G16130.1 | 44.335 | 406 | 170 | 6 | 84 | 488 | 92 | 442 | 1.50e-108 | 337 |
| Msa0857890 | AT5G19560.1 | 42.963 | 405 | 175 | 5 | 84 | 487 | 46 | 395 | 5.43e-107 | 332 |
| Msa0857890 | AT5G19560.5 | 42.963 | 405 | 175 | 5 | 84 | 487 | 46 | 395 | 5.43e-107 | 332 |
| Msa0857890 | AT5G19560.4 | 42.963 | 405 | 175 | 5 | 84 | 487 | 65 | 414 | 6.92e-107 | 332 |
| Msa0857890 | AT5G19560.2 | 41.192 | 369 | 161 | 5 | 84 | 451 | 65 | 378 | 2.33e-91 | 287 |
| Msa0857890 | AT1G31650.2 | 37.990 | 408 | 196 | 4 | 84 | 486 | 110 | 465 | 1.09e-89 | 288 |
| Msa0857890 | AT1G31650.1 | 37.990 | 408 | 196 | 4 | 84 | 486 | 138 | 493 | 3.59e-89 | 288 |
| Msa0857890 | AT5G19560.3 | 44.643 | 280 | 137 | 4 | 209 | 487 | 3 | 265 | 1.38e-76 | 248 |
| Msa0857890 | AT4G00460.1 | 48.913 | 276 | 98 | 4 | 74 | 346 | 96 | 331 | 1.80e-74 | 242 |
| Msa0857890 | AT1G01700.5 | 50.579 | 259 | 87 | 3 | 77 | 332 | 111 | 331 | 2.98e-72 | 237 |
| Msa0857890 | AT1G01700.2 | 50.579 | 259 | 87 | 3 | 77 | 332 | 111 | 331 | 2.98e-72 | 237 |
Find 139 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGCTGCTTTCAGTATT+TGG | 0.134248 | 5_4:+54816069 | None:intergenic |
| TAACATGGTTTCACAGAAAA+AGG | 0.190047 | 5_4:-54815051 | Msa0857890:CDS |
| TTCATCTGATTTGCTGCATT+TGG | 0.225466 | 5_4:+54819625 | None:intergenic |
| GGAAGTTCCCGAGTCGTATT+TGG | 0.241485 | 5_4:-54816018 | Msa0857890:CDS |
| GGTCTTCTTCATTTCCTATT+AGG | 0.245693 | 5_4:-54819661 | Msa0857890:CDS |
| ACTCAACACAAAGCAAAATT+TGG | 0.247443 | 5_4:-54814996 | Msa0857890:CDS |
| TCTTGAGTAGCTTTCTAGTA+TGG | 0.255785 | 5_4:+54815178 | None:intergenic |
| ACACAACTGTTGCTATTTCT+AGG | 0.263163 | 5_4:+54814438 | None:intergenic |
| CAACATGTAGGAACTGTATT+TGG | 0.265120 | 5_4:-54818167 | Msa0857890:intron |
| AAACCTCAACGTCGCGGTTT+TGG | 0.279389 | 5_4:-54814885 | Msa0857890:CDS |
| TTGTTGAGTTAATGCCTTCT+TGG | 0.293497 | 5_4:-54818055 | Msa0857890:CDS |
| TTGTTATTGTTGTGGATAAA+AGG | 0.311337 | 5_4:+54814918 | None:intergenic |
| GCAGGAGGCACACGGGGTAC+TGG | 0.311400 | 5_4:+54816146 | None:intergenic |
| GTTCCACTGCTATGGAGTTT+TGG | 0.317284 | 5_4:-54816259 | Msa0857890:CDS |
| GAACTGTATTTGGACAATTA+TGG | 0.318046 | 5_4:-54818157 | Msa0857890:CDS |
| GGACATTGTGAAGGACTTAA+TGG | 0.321625 | 5_4:-54815582 | Msa0857890:CDS |
| TGAGAACCATTTGTATTAGA+AGG | 0.322843 | 5_4:-54814585 | Msa0857890:three_prime_UTR |
| AGAAAGCTACTCAAGAGTTT+TGG | 0.328969 | 5_4:-54815171 | Msa0857890:CDS |
| TGGAAATCTATCTGAATGTT+TGG | 0.339488 | 5_4:+54815088 | None:intergenic |
| TATTTCCAATTGTCCTTCAA+TGG | 0.344917 | 5_4:+54814465 | None:intergenic |
| GACATAGTGCCCTTCCTAAT+AGG | 0.352007 | 5_4:+54819647 | None:intergenic |
| TTCATTGAAGCAGCGCTTCC+CGG | 0.357161 | 5_4:-54815507 | Msa0857890:CDS |
| AATAAATAAACAAATGGTTC+TGG | 0.376396 | 5_4:+54814515 | None:intergenic |
| TTATCATCAACTTGAGAAAC+AGG | 0.378270 | 5_4:+54819590 | None:intergenic |
| AGAAAAGTGGCAGAGAGAAA+TGG | 0.381993 | 5_4:-54818105 | Msa0857890:CDS |
| AGAGTGTTGTCAAATTATCT+TGG | 0.399409 | 5_4:-54814855 | Msa0857890:CDS |
| TTTGTTACTCAAAACACAAA+AGG | 0.408543 | 5_4:+54819816 | None:intergenic |
| TCTTAATATTGTCCCATTGA+AGG | 0.412423 | 5_4:-54814478 | Msa0857890:three_prime_UTR |
| TTGTCCCATTGAAGGACAAT+TGG | 0.413993 | 5_4:-54814470 | Msa0857890:three_prime_UTR |
| CATCTGGTGCCACAATTCCT+TGG | 0.414903 | 5_4:+54816228 | None:intergenic |
| CTGATTTCTCTTGCGAAAAG+AGG | 0.416366 | 5_4:+54816193 | None:intergenic |
| CTCAAGTGCAACATGCTCAT+TGG | 0.420115 | 5_4:+54815703 | None:intergenic |
| CATAAATTGCGGCTTCTAAA+CGG | 0.424426 | 5_4:+54815672 | None:intergenic |
| CCCTTTGAAGGACTAATTAG+TGG | 0.432878 | 5_4:+54814951 | None:intergenic |
| CACAACTGTTGCTATTTCTA+GGG | 0.437779 | 5_4:+54814439 | None:intergenic |
| AATCTTCCTTCTAATACAAA+TGG | 0.441152 | 5_4:+54814579 | None:intergenic |
| TAGAAGCCGCAATTTATGTA+TGG | 0.441628 | 5_4:-54815667 | Msa0857890:CDS |
| TTTAGATAGTTCCACTGCTA+TGG | 0.442885 | 5_4:-54816267 | Msa0857890:CDS |
| GTGAAGGACTTAATGGTTGA+TGG | 0.444547 | 5_4:-54815575 | Msa0857890:CDS |
| TCAGAATGGAAGAACGTGCT+TGG | 0.444622 | 5_4:-54815798 | Msa0857890:intron |
| GGAGTTACCTCTCCCTTTGA+AGG | 0.445840 | 5_4:+54814939 | None:intergenic |
| CAGGAGGCACACGGGGTACT+GGG | 0.446468 | 5_4:+54816147 | None:intergenic |
| ATTTCCAATTGTCCTTCAAT+GGG | 0.449132 | 5_4:+54814466 | None:intergenic |
| TCAGGATATGTTTGCCAAGA+AGG | 0.453625 | 5_4:+54818041 | None:intergenic |
| TGAATAAATAAATAAACAAA+TGG | 0.455047 | 5_4:+54814509 | None:intergenic |
| TCAAAACACAAAAGGGTTAG+TGG | 0.457781 | 5_4:+54819824 | None:intergenic |
| AAAAGGAGTTAGCACTGCTT+TGG | 0.462316 | 5_4:-54819324 | Msa0857890:CDS |
| CAGAATGGAAGAACGTGCTT+GGG | 0.465023 | 5_4:-54815797 | Msa0857890:CDS |
| TGTGAAACCATGTTAACCAT+TGG | 0.466695 | 5_4:+54815059 | None:intergenic |
| CTTCCTTCCATGTTGACCGC+GGG | 0.467597 | 5_4:+54816967 | None:intergenic |
| GAGGCTGATCCATCTGCATC+TGG | 0.467719 | 5_4:+54816212 | None:intergenic |
| TGAGATTTGGTGAACATTTG+AGG | 0.469102 | 5_4:+54816867 | None:intergenic |
| GCAAGCACTCTTGAGAGAAC+TGG | 0.473659 | 5_4:+54815744 | None:intergenic |
| TCATTGAAGCAGCGCTTCCC+GGG | 0.475313 | 5_4:-54815506 | Msa0857890:CDS |
| CTGCTTGGTGAAGATATGTC+AGG | 0.475560 | 5_4:-54819353 | Msa0857890:CDS |
| GTAACAAAATCAAAGCTTGT+TGG | 0.477756 | 5_4:-54819801 | Msa0857890:five_prime_UTR |
| AGCATGAAACCTTGTTGCAT+TGG | 0.478930 | 5_4:+54815450 | None:intergenic |
| TAGATTTCCATTGGCTCCAA+TGG | 0.482149 | 5_4:-54815075 | Msa0857890:CDS |
| CAGCATTGCTTTAGATGACA+TGG | 0.484744 | 5_4:-54816039 | Msa0857890:CDS |
| TTCTTCATTTCCTATTAGGA+AGG | 0.485913 | 5_4:-54819657 | Msa0857890:CDS |
| AATGGGTCTTGTAGTTCCAC+TGG | 0.490578 | 5_4:-54819728 | Msa0857890:CDS |
| GTTCGACTACAAAGTCATCC+TGG | 0.490964 | 5_4:-54815604 | Msa0857890:CDS |
| GGTGAAGATATGTCAGGGTC+TGG | 0.491025 | 5_4:-54819347 | Msa0857890:CDS |
| GTTGTTCTTCACGTGAAGAA+AGG | 0.491744 | 5_4:+54816924 | None:intergenic |
| GTACCCCGTGTGCCTCCTGC+CGG | 0.499229 | 5_4:-54816143 | Msa0857890:CDS |
| TTGTTACTCAAAACACAAAA+GGG | 0.500795 | 5_4:+54819817 | None:intergenic |
| TTGTCGAGTTTACGTAGAGC+TGG | 0.504038 | 5_4:+54816397 | None:intergenic |
| TGATATTGTTGTTATTGTTG+TGG | 0.506831 | 5_4:+54814910 | None:intergenic |
| GTATTTGGATACCCTTCCTA+AGG | 0.508742 | 5_4:-54816003 | Msa0857890:intron |
| ACATTCAGATAGATTTCCAT+TGG | 0.512184 | 5_4:-54815084 | Msa0857890:CDS |
| GATATGTCAGGGTCTGGAAA+AGG | 0.513629 | 5_4:-54819341 | Msa0857890:CDS |
| ATTTAAGAGAGTGAGTTCAA+TGG | 0.515162 | 5_4:-54814548 | Msa0857890:three_prime_UTR |
| ACCTCTAGCTTACTACCATC+AGG | 0.519299 | 5_4:+54818023 | None:intergenic |
| TCTTGAGTTCTCACTGAGAC+CGG | 0.521027 | 5_4:+54816124 | None:intergenic |
| ATGTAGTTTGACTTAAACCC+GGG | 0.524605 | 5_4:+54815489 | None:intergenic |
| TGGAAAATCAAACCTTAGGA+AGG | 0.525020 | 5_4:+54815991 | None:intergenic |
| GTGTGTTTGTGAAAGGAGTA+AGG | 0.525181 | 5_4:-54814419 | Msa0857890:three_prime_UTR |
| ACGTGAAGAAAGGAAGAAGA+AGG | 0.528567 | 5_4:+54816934 | None:intergenic |
| ACACCAAAACCGCGACGTTG+AGG | 0.531446 | 5_4:+54814882 | None:intergenic |
| GAGTTCTCACTGAGACCGGC+AGG | 0.534877 | 5_4:+54816128 | None:intergenic |
| ATCAGCGGCAAGAGGAGAAG+TGG | 0.535708 | 5_4:-54816175 | Msa0857890:CDS |
| ATGTTAACCATTGGAGCCAA+TGG | 0.540862 | 5_4:+54815068 | None:intergenic |
| ATCAGGAGGAGATATGATGA+AGG | 0.541951 | 5_4:-54819393 | Msa0857890:CDS |
| GCCACTAATTAGTCCTTCAA+AGG | 0.542594 | 5_4:-54814952 | Msa0857890:CDS |
| GTGTTGTCAAATTATCTTGG+AGG | 0.544230 | 5_4:-54814852 | Msa0857890:CDS |
| ATGGATTGGCTTCTTTGTGT+TGG | 0.544302 | 5_4:-54818086 | Msa0857890:CDS |
| CCTTCCTTCCATGTTGACCG+CGG | 0.547734 | 5_4:+54816966 | None:intergenic |
| TCTTCATTTCCTATTAGGAA+GGG | 0.555428 | 5_4:-54819656 | Msa0857890:CDS |
| ACTTTGTAGTCGAACGGCTA+GGG | 0.555981 | 5_4:+54815612 | None:intergenic |
| CCACTAATTAGTCCTTCAAA+GGG | 0.557284 | 5_4:-54814951 | Msa0857890:CDS |
| AATTAGTCCTTCAAAGGGAG+AGG | 0.557362 | 5_4:-54814946 | Msa0857890:CDS |
| GGACCCGCGGTCAACATGGA+AGG | 0.559541 | 5_4:-54816970 | Msa0857890:CDS |
| GAGGAGATATGATGAAGGAA+AGG | 0.559995 | 5_4:-54819388 | Msa0857890:CDS |
| GTGGTTTAGAGTGAGATCTC+TGG | 0.563305 | 5_4:+54815642 | None:intergenic |
| GACTTTGTAGTCGAACGGCT+AGG | 0.567248 | 5_4:+54815611 | None:intergenic |
| GGTGGGACCCGCGGTCAACA+TGG | 0.570747 | 5_4:-54816974 | Msa0857890:CDS |
| ATTGGCTCCAATGGTTAACA+TGG | 0.571176 | 5_4:-54815066 | Msa0857890:CDS |
| AGTGGCAGAGAGAAATGGAT+TGG | 0.572062 | 5_4:-54818100 | Msa0857890:CDS |
| GGGTTTAAGTCAAACTACAT+TGG | 0.572158 | 5_4:-54815486 | Msa0857890:CDS |
| TTTGACTTTGTAGGATCAGG+AGG | 0.572328 | 5_4:-54819407 | Msa0857890:intron |
| TAAGTCCTTCACAATGTCCC+AGG | 0.572863 | 5_4:+54815586 | None:intergenic |
| GAAGGACTAATTAGTGGCAC+AGG | 0.574721 | 5_4:+54814957 | None:intergenic |
| TGAGACCGGCAGGAGGCACA+CGG | 0.577679 | 5_4:+54816138 | None:intergenic |
| AAATATTGTTGAAATCTGAA+AGG | 0.577938 | 5_4:-54814616 | Msa0857890:three_prime_UTR |
| CATGTGAAAAGAAAGAAAAG+TGG | 0.581474 | 5_4:-54818118 | Msa0857890:CDS |
| AGGTTTGCGAAGTTACTGCT+TGG | 0.585242 | 5_4:-54819368 | Msa0857890:CDS |
| TTCGACTACAAAGTCATCCT+GGG | 0.585548 | 5_4:-54815603 | Msa0857890:CDS |
| AACAGTTGTGTGTTTGTGAA+AGG | 0.586920 | 5_4:-54814426 | Msa0857890:three_prime_UTR |
| CCGCGGTCAACATGGAAGGA+AGG | 0.593392 | 5_4:-54816966 | Msa0857890:CDS |
| GAGACCGGCAGGAGGCACAC+GGG | 0.597490 | 5_4:+54816139 | None:intergenic |
| CAAGAGAAATCAGCGGCAAG+AGG | 0.598859 | 5_4:-54816183 | Msa0857890:CDS |
| AATGCTATTACTAATTTGTG+TGG | 0.601531 | 5_4:-54819293 | Msa0857890:intron |
| GTATGTTGACCAAGGAATTG+TGG | 0.604214 | 5_4:-54816237 | Msa0857890:CDS |
| AATGTAGTTTGACTTAAACC+CGG | 0.610470 | 5_4:+54815488 | None:intergenic |
| AAAACTGCAGGTGGGACCCG+CGG | 0.612609 | 5_4:-54816983 | Msa0857890:intron |
| GTCATCCTGGGACATTGTGA+AGG | 0.614434 | 5_4:-54815591 | Msa0857890:CDS |
| TGCTTGGTGAAGATATGTCA+GGG | 0.618748 | 5_4:-54819352 | Msa0857890:CDS |
| AGCAATGCTGTTGATAGACA+TGG | 0.626027 | 5_4:+54816052 | None:intergenic |
| CTGGCGCCATACATAAATTG+CGG | 0.627878 | 5_4:+54815661 | None:intergenic |
| TCCTGATGGTAGTAAGCTAG+AGG | 0.628089 | 5_4:-54818024 | Msa0857890:intron |
| ACAACTGTTGCTATTTCTAG+GGG | 0.628205 | 5_4:+54814440 | None:intergenic |
| TCTTGGCAAACATATCCTGA+TGG | 0.629177 | 5_4:-54818038 | Msa0857890:CDS |
| AGGATGACTTTGTAGTCGAA+CGG | 0.629366 | 5_4:+54815606 | None:intergenic |
| AAGGGTATCCAAATACGACT+CGG | 0.630421 | 5_4:+54816010 | None:intergenic |
| GGAAAATCAAACCTTAGGAA+GGG | 0.632917 | 5_4:+54815992 | None:intergenic |
| ATACCAAAACTCCATAGCAG+TGG | 0.634242 | 5_4:+54816256 | None:intergenic |
| ATCTGAGCAACACGATCCAG+TGG | 0.638385 | 5_4:+54819712 | None:intergenic |
| AGGGTATCCAAATACGACTC+GGG | 0.638687 | 5_4:+54816011 | None:intergenic |
| ATCATTAAACCTCAACGTCG+CGG | 0.638867 | 5_4:-54814891 | Msa0857890:CDS |
| AGACCGGCAGGAGGCACACG+GGG | 0.642385 | 5_4:+54816140 | None:intergenic |
| GTCGAACGGCTAGGGTAGAG+TGG | 0.643760 | 5_4:+54815620 | None:intergenic |
| ATTGTGGCACCAGATGCAGA+TGG | 0.645033 | 5_4:-54816221 | Msa0857890:CDS |
| AGCGGCAAGAGGAGAAGTGG+TGG | 0.645482 | 5_4:-54816172 | Msa0857890:CDS |
| CGGTCAACATGGAAGGAAGG+AGG | 0.651869 | 5_4:-54816963 | Msa0857890:CDS |
| TAGCAAGATCCAATGCAACA+AGG | 0.662550 | 5_4:-54815459 | Msa0857890:intron |
| TTCTCACTGAGACCGGCAGG+AGG | 0.665518 | 5_4:+54816131 | None:intergenic |
| GCACTCTTGAGAGAACTGGT+CGG | 0.681945 | 5_4:+54815748 | None:intergenic |
| GAACGGCTAGGGTAGAGTGG+TGG | 0.690009 | 5_4:+54815623 | None:intergenic |
| AGACAAAATGATGATGTGTG+AGG | 0.756552 | 5_4:-54814710 | Msa0857890:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTCTTTTTTGA+AGG | - | chr5_4:54815116-54815135 | Msa0857890:CDS | 10.0% |
| !!! | CTAAAAACTTTTTTTTTTTT+AGG | + | chr5_4:54815203-54815222 | None:intergenic | 10.0% |
| !! | ATTAGCTAATATAAAAAATT+TGG | + | chr5_4:54815267-54815286 | None:intergenic | 10.0% |
| !!! | TTTATATTAGCTAATTTTTT+TGG | - | chr5_4:54815272-54815291 | Msa0857890:intron | 10.0% |
| !!! | TTATATTAGCTAATTTTTTT+GGG | - | chr5_4:54815273-54815292 | Msa0857890:intron | 10.0% |
| !! | CATATACAATTAAAATTTAT+GGG | + | chr5_4:54815649-54815668 | None:intergenic | 10.0% |
| !! | ACATATACAATTAAAATTTA+TGG | + | chr5_4:54815650-54815669 | None:intergenic | 10.0% |
| !!! | AATTTTTATGAATAAAAAAG+AGG | - | chr5_4:54817066-54817085 | Msa0857890:intron | 10.0% |
| !! | GAAATAAATAAAAACAAAAT+TGG | - | chr5_4:54817133-54817152 | Msa0857890:intron | 10.0% |
| !! | TGAATAAATAAATAAACAAA+TGG | + | chr5_4:54819788-54819807 | None:intergenic | 10.0% |
| !!! | AATTTTCAAAAGAGAAAAAA+TGG | - | chr5_4:54814548-54814567 | Msa0857890:three_prime_UTR | 15.0% |
| !!! | ATTTTCAAAAGAGAAAAAAT+GGG | - | chr5_4:54814549-54814568 | Msa0857890:three_prime_UTR | 15.0% |
| !! | TAATAACAAATTTCAAAAGT+TGG | - | chr5_4:54815549-54815568 | Msa0857890:CDS | 15.0% |
| !!! | TAAATTTTAATCTCTTTGTA+TGG | + | chr5_4:54815596-54815615 | None:intergenic | 15.0% |
| !!! | GATTAAAATTTATCAGTTTT+TGG | - | chr5_4:54815604-54815623 | Msa0857890:CDS | 15.0% |
| !! | TTCAACAAAGATTAATAAAT+AGG | - | chr5_4:54816341-54816360 | Msa0857890:intron | 15.0% |
| !! | CTTTAAACATGTTATAATTA+TGG | + | chr5_4:54816903-54816922 | None:intergenic | 15.0% |
| !! | GTGTAAAAACTAATAAAAAT+GGG | - | chr5_4:54817108-54817127 | Msa0857890:intron | 15.0% |
| !!! | TTTTTTTCTCTTTTTTTCAT+TGG | + | chr5_4:54819661-54819680 | None:intergenic | 15.0% |
| !! | TACAAAGTCAAAACATAATA+AGG | + | chr5_4:54814879-54814898 | None:intergenic | 20.0% |
| !!! | TTATTATGTTTTGACTTTGT+AGG | - | chr5_4:54814878-54814897 | Msa0857890:CDS | 20.0% |
| !!! | TTGTAACAAATATTGATAGT+AGG | - | chr5_4:54815035-54815054 | Msa0857890:CDS | 20.0% |
| !! | TCGTTAAAAAACGATAAAAA+TGG | + | chr5_4:54815522-54815541 | None:intergenic | 20.0% |
| !!! | AGTGTAATTTTAAAAGTTTG+AGG | - | chr5_4:54815962-54815981 | Msa0857890:intron | 20.0% |
| !!! | GTGTAATTTTAAAAGTTTGA+GGG | - | chr5_4:54815963-54815982 | Msa0857890:intron | 20.0% |
| !!! | TTTCTTACAATTTGTTCAAT+TGG | - | chr5_4:54816095-54816114 | Msa0857890:CDS | 20.0% |
| !!! | TTCTTACAATTTGTTCAATT+GGG | - | chr5_4:54816096-54816115 | Msa0857890:CDS | 20.0% |
| !! | ACATTAAACTCACATATATA+AGG | + | chr5_4:54816317-54816336 | None:intergenic | 20.0% |
| !!! | ATTAGTTTTTACACCATTTT+TGG | + | chr5_4:54817102-54817121 | None:intergenic | 20.0% |
| !! | GGTGTAAAAACTAATAAAAA+TGG | - | chr5_4:54817107-54817126 | Msa0857890:intron | 20.0% |
| !!! | AACTAAAATACCATTTTGAT+TGG | - | chr5_4:54817452-54817471 | Msa0857890:intron | 20.0% |
| !!! | ATTTTTTATTCTTCCAATGT+AGG | - | chr5_4:54817941-54817960 | Msa0857890:intron | 20.0% |
| !! | ATTGTTGATACTATATAATC+TGG | - | chr5_4:54818394-54818413 | Msa0857890:intron | 20.0% |
| !!! | TGTTTCATTTTAAACATTTC+AGG | - | chr5_4:54819081-54819100 | Msa0857890:intron | 20.0% |
| !! | AAATATTGTTGAAATCTGAA+AGG | - | chr5_4:54819678-54819697 | Msa0857890:CDS | 20.0% |
| !! | AATAAATAAACAAATGGTTC+TGG | + | chr5_4:54819782-54819801 | None:intergenic | 20.0% |
| ! | TTGTTACTCAAAACACAAAA+GGG | + | chr5_4:54814480-54814499 | None:intergenic | 25.0% |
| ! | TTTGTTACTCAAAACACAAA+AGG | + | chr5_4:54814481-54814500 | None:intergenic | 25.0% |
| ! | AACAAGCAAAAATAGCAAAA+GGG | - | chr5_4:54814612-54814631 | Msa0857890:three_prime_UTR | 25.0% |
| !! | AATGCTATTACTAATTTGTG+TGG | - | chr5_4:54815001-54815020 | Msa0857890:CDS | 25.0% |
| !! | TATTACTAATTTGTGTGGTA+TGG | - | chr5_4:54815006-54815025 | Msa0857890:CDS | 25.0% |
| ! | TTGTATGGCTTATTATGTAT+TGG | + | chr5_4:54815581-54815600 | None:intergenic | 25.0% |
| !!! | GTTAACTTTTTCTTGTGTTA+TGG | - | chr5_4:54816056-54816075 | Msa0857890:CDS | 25.0% |
| ! | TTCGTTTGATTGAAATAGAA+CGG | - | chr5_4:54816426-54816445 | Msa0857890:CDS | 25.0% |
| !!! | CAAATTTCGAGTTTTCAATT+TGG | + | chr5_4:54816639-54816658 | None:intergenic | 25.0% |
| ! | TCCAAATTTAATTCCTACAT+AGG | - | chr5_4:54817197-54817216 | Msa0857890:intron | 25.0% |
| ! | ATCATAGAGTTAAAAAACCA+AGG | - | chr5_4:54817243-54817262 | Msa0857890:intron | 25.0% |
| ! | TCATAGAGTTAAAAAACCAA+GGG | - | chr5_4:54817244-54817263 | Msa0857890:intron | 25.0% |
| !!! | GGTTTTAGAAAATTCAAAAG+TGG | + | chr5_4:54817409-54817428 | None:intergenic | 25.0% |
| !!! | GTATTTTAGTTTGTGAGATT+TGG | + | chr5_4:54817443-54817462 | None:intergenic | 25.0% |
| !!! | TAGTCAAGGTTTTAAAAAAC+GGG | + | chr5_4:54817750-54817769 | None:intergenic | 25.0% |
| !!! | GTAGTCAAGGTTTTAAAAAA+CGG | + | chr5_4:54817751-54817770 | None:intergenic | 25.0% |
| ! | TTGATAAAAATGTCTGATCT+TGG | + | chr5_4:54817873-54817892 | None:intergenic | 25.0% |
| ! | CTAAAATTTCCTGTTACATA+GGG | + | chr5_4:54818012-54818031 | None:intergenic | 25.0% |
| !! | TCTAAAATTTCCTGTTACAT+AGG | + | chr5_4:54818013-54818032 | None:intergenic | 25.0% |
| ! | AAATAAGCTGAAATGGTTTA+TGG | + | chr5_4:54818967-54818986 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+TGG | + | chr5_4:54818974-54818993 | None:intergenic | 25.0% |
| ! | ATGTTAATGTGAAGTTGTTA+GGG | + | chr5_4:54819062-54819081 | None:intergenic | 25.0% |
| !! | TTTTAAACATTTCAGGATGT+TGG | - | chr5_4:54819088-54819107 | Msa0857890:intron | 25.0% |
| !! | TTGTTATTGTTGTGGATAAA+AGG | + | chr5_4:54819379-54819398 | None:intergenic | 25.0% |
| !! | TGATATTGTTGTTATTGTTG+TGG | + | chr5_4:54819387-54819406 | None:intergenic | 25.0% |
| ! | AATCTTCCTTCTAATACAAA+TGG | + | chr5_4:54819718-54819737 | None:intergenic | 25.0% |
| GTAACAAAATCAAAGCTTGT+TGG | - | chr5_4:54814493-54814512 | Msa0857890:three_prime_UTR | 30.0% | |
| !! | TCAAAGCTTGTTGGTAAAAA+TGG | - | chr5_4:54814502-54814521 | Msa0857890:three_prime_UTR | 30.0% |
| GAACAAGCAAAAATAGCAAA+AGG | - | chr5_4:54814611-54814630 | Msa0857890:three_prime_UTR | 30.0% | |
| TTCTTCATTTCCTATTAGGA+AGG | - | chr5_4:54814637-54814656 | Msa0857890:three_prime_UTR | 30.0% | |
| TCTTCATTTCCTATTAGGAA+GGG | - | chr5_4:54814638-54814657 | Msa0857890:three_prime_UTR | 30.0% | |
| TTATCATCAACTTGAGAAAC+AGG | + | chr5_4:54814707-54814726 | None:intergenic | 30.0% | |
| AGTATCAGCTCAAAAATTTC+TGG | - | chr5_4:54814737-54814756 | Msa0857890:CDS | 30.0% | |
| TTCTGTTCTGTTTAGTGTTT+AGG | - | chr5_4:54814782-54814801 | Msa0857890:CDS | 30.0% | |
| ! | AATATTGATAGTAGGTTCAG+TGG | - | chr5_4:54815043-54815062 | Msa0857890:CDS | 30.0% |
| TGAAAACACACACATATAAG+TGG | - | chr5_4:54815322-54815341 | Msa0857890:intron | 30.0% | |
| TGAAAACACACACATATAAG+TGG | - | chr5_4:54815322-54815341 | Msa0857890:intron | 30.0% | |
| !!! | TAGACACACATTTTGGAATT+TGG | - | chr5_4:54815774-54815793 | Msa0857890:CDS | 30.0% |
| GAACTGTATTTGGACAATTA+TGG | - | chr5_4:54816137-54816156 | Msa0857890:CDS | 30.0% | |
| ! | CACTTTTCTTTCTTTTCACA+TGG | + | chr5_4:54816178-54816197 | None:intergenic | 30.0% |
| CATGTGAAAAGAAAGAAAAG+TGG | - | chr5_4:54816176-54816195 | Msa0857890:CDS | 30.0% | |
| ATCATACAAAGTAGAGAGTA+GGG | + | chr5_4:54816367-54816386 | None:intergenic | 30.0% | |
| AATCATACAAAGTAGAGAGT+AGG | + | chr5_4:54816368-54816387 | None:intergenic | 30.0% | |
| ACTCTCTACTTTGTATGATT+AGG | - | chr5_4:54816368-54816387 | Msa0857890:intron | 30.0% | |
| CTCTCTACTTTGTATGATTA+GGG | - | chr5_4:54816369-54816388 | Msa0857890:intron | 30.0% | |
| AACGGTCTATATTTCATGTT+TGG | - | chr5_4:54816444-54816463 | Msa0857890:intron | 30.0% | |
| TTGATCAAAATCAGATGACT+CGG | - | chr5_4:54816494-54816513 | Msa0857890:intron | 30.0% | |
| CTGAACAGCTAAATAGAAAT+TGG | - | chr5_4:54816592-54816611 | Msa0857890:intron | 30.0% | |
| !! | ACTACCAAGGTTCTAAAAAA+CGG | - | chr5_4:54816706-54816725 | Msa0857890:intron | 30.0% |
| GCCTATGTAGGAATTAAATT+TGG | + | chr5_4:54817201-54817220 | None:intergenic | 30.0% | |
| ACTCTATGATTTAGATCTTG+TGG | + | chr5_4:54817233-54817252 | None:intergenic | 30.0% | |
| GCATGAAAATCCAATCAAAA+TGG | + | chr5_4:54817465-54817484 | None:intergenic | 30.0% | |
| !!! | ACTGAATTTTCAAGTCTGAA+CGG | - | chr5_4:54817555-54817574 | Msa0857890:intron | 30.0% |
| ATTTCTTTCTCAGCGTTAAA+AGG | - | chr5_4:54817663-54817682 | Msa0857890:intron | 30.0% | |
| TTTCTTTCTCAGCGTTAAAA+GGG | - | chr5_4:54817664-54817683 | Msa0857890:intron | 30.0% | |
| TATGTGGAAAATCAAACCTT+AGG | + | chr5_4:54818310-54818329 | None:intergenic | 30.0% | |
| ! | AAGATCTCAATCGATTTATG+TGG | + | chr5_4:54818326-54818345 | None:intergenic | 30.0% |
| TGATACATGATAGAACGTTA+TGG | - | chr5_4:54818426-54818445 | Msa0857890:intron | 30.0% | |
| AAGTTCAAACAACGTATCAT+GGG | + | chr5_4:54818476-54818495 | None:intergenic | 30.0% | |
| AAAGTTCAAACAACGTATCA+TGG | + | chr5_4:54818477-54818496 | None:intergenic | 30.0% | |
| ! | AATGTAGTTTGACTTAAACC+CGG | + | chr5_4:54818809-54818828 | None:intergenic | 30.0% |
| ATTGTATCATCAACAGATCT+TGG | - | chr5_4:54818912-54818931 | Msa0857890:intron | 30.0% | |
| CATGTTAATGTGAAGTTGTT+AGG | + | chr5_4:54819063-54819082 | None:intergenic | 30.0% | |
| TGGAAATCTATCTGAATGTT+TGG | + | chr5_4:54819209-54819228 | None:intergenic | 30.0% | |
| ACATTCAGATAGATTTCCAT+TGG | - | chr5_4:54819210-54819229 | Msa0857890:intron | 30.0% | |
| TAACATGGTTTCACAGAAAA+AGG | - | chr5_4:54819243-54819262 | Msa0857890:intron | 30.0% | |
| ACTCAACACAAAGCAAAATT+TGG | - | chr5_4:54819298-54819317 | Msa0857890:CDS | 30.0% | |
| !! | AGAGTGTTGTCAAATTATCT+TGG | - | chr5_4:54819439-54819458 | Msa0857890:intron | 30.0% |
| !! | TCATTTTGTCTTGCTTTTCA+TGG | + | chr5_4:54819575-54819594 | None:intergenic | 30.0% |
| TGAGAACCATTTGTATTAGA+AGG | - | chr5_4:54819709-54819728 | Msa0857890:CDS | 30.0% | |
| ATTTAAGAGAGTGAGTTCAA+TGG | - | chr5_4:54819746-54819765 | Msa0857890:CDS | 30.0% | |
| TCTTAATATTGTCCCATTGA+AGG | - | chr5_4:54819816-54819835 | Msa0857890:five_prime_UTR | 30.0% | |
| ATTTCCAATTGTCCTTCAAT+GGG | + | chr5_4:54819831-54819850 | None:intergenic | 30.0% | |
| TATTTCCAATTGTCCTTCAA+TGG | + | chr5_4:54819832-54819851 | None:intergenic | 30.0% | |
| TCAAAACACAAAAGGGTTAG+TGG | + | chr5_4:54814473-54814492 | None:intergenic | 35.0% | |
| !! | AAGCTTGTTGGTAAAAATGG+AGG | - | chr5_4:54814505-54814524 | Msa0857890:three_prime_UTR | 35.0% |
| GGTCTTCTTCATTTCCTATT+AGG | - | chr5_4:54814633-54814652 | Msa0857890:three_prime_UTR | 35.0% | |
| !! | TTCATCTGATTTGCTGCATT+TGG | + | chr5_4:54814672-54814691 | None:intergenic | 35.0% |
| ACACTAAACAGAACAGAACA+TGG | + | chr5_4:54814780-54814799 | None:intergenic | 35.0% | |
| !!! | TGTTTTGACTTTGTAGGATC+AGG | - | chr5_4:54814884-54814903 | Msa0857890:CDS | 35.0% |
| !!! | GAACTCTGATCACGTTTTTT+GGG | - | chr5_4:54815358-54815377 | Msa0857890:intron | 35.0% |
| GCGAAAAATAACACGTACTT+TGG | - | chr5_4:54815726-54815745 | Msa0857890:CDS | 35.0% | |
| TTTGGCAAAGTGGTAAAGAA+TGG | - | chr5_4:54815744-54815763 | Msa0857890:CDS | 35.0% | |
| AAGTGGTAAAGAATGGTCAA+TGG | - | chr5_4:54815751-54815770 | Msa0857890:CDS | 35.0% | |
| ! | TCAATGGTAGACACACATTT+TGG | - | chr5_4:54815767-54815786 | Msa0857890:CDS | 35.0% |
| !! | ACCACTCACTTTTCTTTTTC+CGG | + | chr5_4:54815892-54815911 | None:intergenic | 35.0% |
| ATACAGCTTAAACCTACTCA+GGG | + | chr5_4:54816026-54816045 | None:intergenic | 35.0% | |
| AATACAGCTTAAACCTACTC+AGG | + | chr5_4:54816027-54816046 | None:intergenic | 35.0% | |
| CAACATGTAGGAACTGTATT+TGG | - | chr5_4:54816127-54816146 | Msa0857890:CDS | 35.0% | |
| ! | TCTTTCTTTTCACATGGTAC+AGG | + | chr5_4:54816172-54816191 | None:intergenic | 35.0% |
| TTGTTGAGTTAATGCCTTCT+TGG | - | chr5_4:54816239-54816258 | Msa0857890:CDS | 35.0% | |
| TAAATTGAGTCCCTGGTTAT+AGG | + | chr5_4:54816525-54816544 | None:intergenic | 35.0% | |
| ! | ACCTGCTGTCAAATTTTCAT+TGG | - | chr5_4:54816544-54816563 | Msa0857890:intron | 35.0% |
| ACCAATGAAAATTTGACAGC+AGG | + | chr5_4:54816548-54816567 | None:intergenic | 35.0% | |
| ATTTAGCTGTTCAGATAGAC+TGG | + | chr5_4:54816586-54816605 | None:intergenic | 35.0% | |
| GGTAGTAGTAGTACTAGTAA+GGG | + | chr5_4:54816692-54816711 | None:intergenic | 35.0% | |
| TGGTAGTAGTAGTACTAGTA+AGG | + | chr5_4:54816693-54816712 | None:intergenic | 35.0% | |
| TACTAGTACTACTACTACCA+AGG | - | chr5_4:54816693-54816712 | Msa0857890:intron | 35.0% | |
| ! | AGGCATTAAAGTGCCAAAAA+TGG | - | chr5_4:54817086-54817105 | Msa0857890:intron | 35.0% |
| ! | AAAAACAAAATTGGCTCAGC+TGG | - | chr5_4:54817142-54817161 | Msa0857890:intron | 35.0% |
| ! | AAGGGTGCAGATATGAAAAA+GGG | - | chr5_4:54817262-54817281 | Msa0857890:intron | 35.0% |
| !! | TGAGATTTGGTGAACATTTG+AGG | + | chr5_4:54817430-54817449 | None:intergenic | 35.0% |
| TTCTTTCTCAGCGTTAAAAG+GGG | - | chr5_4:54817665-54817684 | Msa0857890:intron | 35.0% | |
| ACTATCAAAGGTAGTAGTCA+AGG | + | chr5_4:54817764-54817783 | None:intergenic | 35.0% | |
| ! | TGACTACTACCTTTGATAGT+AGG | - | chr5_4:54817764-54817783 | Msa0857890:intron | 35.0% |
| TCCGTGTGCATATATTTAGT+AGG | - | chr5_4:54817790-54817809 | Msa0857890:intron | 35.0% | |
| CCCTACTAAATATATGCACA+CGG | + | chr5_4:54817794-54817813 | None:intergenic | 35.0% | |
| CCGTGTGCATATATTTAGTA+GGG | - | chr5_4:54817791-54817810 | Msa0857890:intron | 35.0% | |
| ! | TACACTTTTCCCTATGTAAC+AGG | - | chr5_4:54818000-54818019 | Msa0857890:intron | 35.0% |
| TTTAGATAGTTCCACTGCTA+TGG | - | chr5_4:54818027-54818046 | Msa0857890:CDS | 35.0% | |
| GGAAAATCAAACCTTAGGAA+GGG | + | chr5_4:54818305-54818324 | None:intergenic | 35.0% | |
| TGGAAAATCAAACCTTAGGA+AGG | + | chr5_4:54818306-54818325 | None:intergenic | 35.0% | |
| CGTTGTTTGAACTTTCAGAA+TGG | - | chr5_4:54818482-54818501 | Msa0857890:intron | 35.0% | |
| CATAAATTGCGGCTTCTAAA+CGG | + | chr5_4:54818625-54818644 | None:intergenic | 35.0% | |
| TAGAAGCCGCAATTTATGTA+TGG | - | chr5_4:54818627-54818646 | Msa0857890:intron | 35.0% | |
| ! | ATGTAGTTTGACTTAAACCC+GGG | + | chr5_4:54818808-54818827 | None:intergenic | 35.0% |
| GGGTTTAAGTCAAACTACAT+TGG | - | chr5_4:54818808-54818827 | Msa0857890:intron | 35.0% | |
| ATAAAGAGAAGCTTATGCAC+GGG | + | chr5_4:54819009-54819028 | None:intergenic | 35.0% | |
| CATAAAGAGAAGCTTATGCA+CGG | + | chr5_4:54819010-54819029 | None:intergenic | 35.0% | |
| ! | TCTTGAGTAGCTTTCTAGTA+TGG | + | chr5_4:54819119-54819138 | None:intergenic | 35.0% |
| ! | AGAAAGCTACTCAAGAGTTT+TGG | - | chr5_4:54819123-54819142 | Msa0857890:intron | 35.0% |
| TGTGAAACCATGTTAACCAT+TGG | + | chr5_4:54819238-54819257 | None:intergenic | 35.0% | |
| CCACTAATTAGTCCTTCAAA+GGG | - | chr5_4:54819343-54819362 | Msa0857890:CDS | 35.0% | |
| GTGTTGTCAAATTATCTTGG+AGG | - | chr5_4:54819442-54819461 | Msa0857890:intron | 35.0% | |
| ! | TGTTCTGTTCTTTTGCAACT+TGG | + | chr5_4:54819526-54819545 | None:intergenic | 35.0% |
| ! | AGACAAAATGATGATGTGTG+AGG | - | chr5_4:54819584-54819603 | Msa0857890:CDS | 35.0% |
| !! | ACAACTGTTGCTATTTCTAG+GGG | + | chr5_4:54819857-54819876 | None:intergenic | 35.0% |
| !! | CACAACTGTTGCTATTTCTA+GGG | + | chr5_4:54819858-54819877 | None:intergenic | 35.0% |
| !! | ACACAACTGTTGCTATTTCT+AGG | + | chr5_4:54819859-54819878 | None:intergenic | 35.0% |
| AACAGTTGTGTGTTTGTGAA+AGG | - | chr5_4:54819868-54819887 | Msa0857890:five_prime_UTR | 35.0% | |
| ! | TTTGACTTTGTAGGATCAGG+AGG | - | chr5_4:54814887-54814906 | Msa0857890:CDS | 40.0% |
| ATCAGGAGGAGATATGATGA+AGG | - | chr5_4:54814901-54814920 | Msa0857890:CDS | 40.0% | |
| GAGGAGATATGATGAAGGAA+AGG | - | chr5_4:54814906-54814925 | Msa0857890:CDS | 40.0% | |
| ! | TGCTTGGTGAAGATATGTCA+GGG | - | chr5_4:54814942-54814961 | Msa0857890:CDS | 40.0% |
| AAAAGGAGTTAGCACTGCTT+TGG | - | chr5_4:54814970-54814989 | Msa0857890:CDS | 40.0% | |
| !!! | CGAACTCTGATCACGTTTTT+TGG | - | chr5_4:54815357-54815376 | Msa0857890:intron | 40.0% |
| TAACACGTACTTTGGCAAAG+TGG | - | chr5_4:54815734-54815753 | Msa0857890:CDS | 40.0% | |
| !! | CTCACTTTTCTTTTTCCGGA+TGG | + | chr5_4:54815888-54815907 | None:intergenic | 40.0% |
| TCCGGAAAAAGAAAAGTGAG+TGG | - | chr5_4:54815888-54815907 | Msa0857890:intron | 40.0% | |
| ! | TTAAAAGTTTGAGGGTGTGC+AGG | - | chr5_4:54815971-54815990 | Msa0857890:intron | 40.0% |
| TACAGCTTAAACCTACTCAG+GGG | + | chr5_4:54816025-54816044 | None:intergenic | 40.0% | |
| !! | TGGGATTTGTTGCAACATGT+AGG | - | chr5_4:54816115-54816134 | Msa0857890:CDS | 40.0% |
| AGAAAAGTGGCAGAGAGAAA+TGG | - | chr5_4:54816189-54816208 | Msa0857890:CDS | 40.0% | |
| !! | ATGGATTGGCTTCTTTGTGT+TGG | - | chr5_4:54816208-54816227 | Msa0857890:CDS | 40.0% |
| TCAGGATATGTTTGCCAAGA+AGG | + | chr5_4:54816256-54816275 | None:intergenic | 40.0% | |
| TCTTGGCAAACATATCCTGA+TGG | - | chr5_4:54816256-54816275 | Msa0857890:CDS | 40.0% | |
| TTGTAGTCATGTCAACGCAT+TGG | - | chr5_4:54816396-54816415 | Msa0857890:CDS | 40.0% | |
| ! | ACTCGGATTTTCCTATAACC+AGG | - | chr5_4:54816511-54816530 | Msa0857890:intron | 40.0% |
| ! | CTCGGATTTTCCTATAACCA+GGG | - | chr5_4:54816512-54816531 | Msa0857890:intron | 40.0% |
| GTAGTACTAGTAAGGGATCT+CGG | + | chr5_4:54816685-54816704 | None:intergenic | 40.0% | |
| !! | AAGGTTCTAAAAAACGGTCG+CGG | - | chr5_4:54816712-54816731 | Msa0857890:intron | 40.0% |
| GATACAAATAACGGTCTTCG+CGG | - | chr5_4:54816789-54816808 | Msa0857890:intron | 40.0% | |
| !! | CTTTTTCATATCTGCACCCT+TGG | + | chr5_4:54817263-54817282 | None:intergenic | 40.0% |
| ! | CAAGGGTGCAGATATGAAAA+AGG | - | chr5_4:54817261-54817280 | Msa0857890:intron | 40.0% |
| AGGGTGCAGATATGAAAAAG+GGG | - | chr5_4:54817263-54817282 | Msa0857890:intron | 40.0% | |
| GTGCAAAAGCAACAGCATAT+AGG | - | chr5_4:54817286-54817305 | Msa0857890:intron | 40.0% | |
| AGCATATAGGACAAAACTGC+AGG | - | chr5_4:54817299-54817318 | Msa0857890:intron | 40.0% | |
| ATATAGGACAAAACTGCAGG+TGG | - | chr5_4:54817302-54817321 | Msa0857890:intron | 40.0% | |
| TATAGGACAAAACTGCAGGT+GGG | - | chr5_4:54817303-54817322 | Msa0857890:intron | 40.0% | |
| ACGTGAAGAAAGGAAGAAGA+AGG | + | chr5_4:54817363-54817382 | None:intergenic | 40.0% | |
| GTTGTTCTTCACGTGAAGAA+AGG | + | chr5_4:54817373-54817392 | None:intergenic | 40.0% | |
| AGCGTTAAAAGGGGCAAAAA+CGG | - | chr5_4:54817674-54817693 | Msa0857890:intron | 40.0% | |
| AAAAGGGGCAAAAACGGTAA+CGG | - | chr5_4:54817680-54817699 | Msa0857890:intron | 40.0% | |
| CAAAAACGGCCGTTACAAAT+CGG | + | chr5_4:54817718-54817737 | None:intergenic | 40.0% | |
| !!! | ATTTGTAACGGCCGTTTTTG+CGG | - | chr5_4:54817718-54817737 | Msa0857890:intron | 40.0% |
| TCTAACATGTTCTGTTCTGC+AGG | - | chr5_4:54817833-54817852 | Msa0857890:intron | 40.0% | |
| ! | TTCCAATGTAGGCTAGTTCT+TGG | - | chr5_4:54817952-54817971 | Msa0857890:intron | 40.0% |
| ! | TACCAAGAACTAGCCTACAT+TGG | + | chr5_4:54817957-54817976 | None:intergenic | 40.0% |
| ATACCAAAACTCCATAGCAG+TGG | + | chr5_4:54818041-54818060 | None:intergenic | 40.0% | |
| !! | GAGTTTTGGTATGTTGACCA+AGG | - | chr5_4:54818049-54818068 | Msa0857890:CDS | 40.0% |
| GTATGTTGACCAAGGAATTG+TGG | - | chr5_4:54818057-54818076 | Msa0857890:CDS | 40.0% | |
| CTGATTTCTCTTGCGAAAAG+AGG | + | chr5_4:54818104-54818123 | None:intergenic | 40.0% | |
| ! | CTTTTCGCAAGAGAAATCAG+CGG | - | chr5_4:54818104-54818123 | Msa0857890:CDS | 40.0% |
| ! | ACATGGCTGCTTTCAGTATT+TGG | + | chr5_4:54818228-54818247 | None:intergenic | 40.0% |
| ! | AGCAATGCTGTTGATAGACA+TGG | + | chr5_4:54818245-54818264 | None:intergenic | 40.0% |
| ! | CAGCATTGCTTTAGATGACA+TGG | - | chr5_4:54818255-54818274 | Msa0857890:intron | 40.0% |
| !! | AAGGGTATCCAAATACGACT+CGG | + | chr5_4:54818287-54818306 | None:intergenic | 40.0% |
| GTATTTGGATACCCTTCCTA+AGG | - | chr5_4:54818291-54818310 | Msa0857890:intron | 40.0% | |
| AGGATGACTTTGTAGTCGAA+CGG | + | chr5_4:54818691-54818710 | None:intergenic | 40.0% | |
| TTCGACTACAAAGTCATCCT+GGG | - | chr5_4:54818691-54818710 | Msa0857890:intron | 40.0% | |
| GGACATTGTGAAGGACTTAA+TGG | - | chr5_4:54818712-54818731 | Msa0857890:intron | 40.0% | |
| GTGAAGGACTTAATGGTTGA+TGG | - | chr5_4:54818719-54818738 | Msa0857890:intron | 40.0% | |
| TAGCAAGATCCAATGCAACA+AGG | - | chr5_4:54818835-54818854 | Msa0857890:intron | 40.0% | |
| AGCATGAAACCTTGTTGCAT+TGG | + | chr5_4:54818847-54818866 | None:intergenic | 40.0% | |
| TAAAGAGAAGCTTATGCACG+GGG | + | chr5_4:54819008-54819027 | None:intergenic | 40.0% | |
| !! | TAGATTTCCATTGGCTCCAA+TGG | - | chr5_4:54819219-54819238 | Msa0857890:intron | 40.0% |
| ATGTTAACCATTGGAGCCAA+TGG | + | chr5_4:54819229-54819248 | None:intergenic | 40.0% | |
| ! | ATTGGCTCCAATGGTTAACA+TGG | - | chr5_4:54819228-54819247 | Msa0857890:intron | 40.0% |
| GCCACTAATTAGTCCTTCAA+AGG | - | chr5_4:54819342-54819361 | Msa0857890:CDS | 40.0% | |
| ! | CCCTTTGAAGGACTAATTAG+TGG | + | chr5_4:54819346-54819365 | None:intergenic | 40.0% |
| AATTAGTCCTTCAAAGGGAG+AGG | - | chr5_4:54819348-54819367 | Msa0857890:CDS | 40.0% | |
| ATCATTAAACCTCAACGTCG+CGG | - | chr5_4:54819403-54819422 | Msa0857890:intron | 40.0% | |
| TTGTCCCATTGAAGGACAAT+TGG | - | chr5_4:54819824-54819843 | Msa0857890:five_prime_UTR | 40.0% | |
| ! | AATGGGTCTTGTAGTTCCAC+TGG | - | chr5_4:54814566-54814585 | Msa0857890:three_prime_UTR | 45.0% |
| GACATAGTGCCCTTCCTAAT+AGG | + | chr5_4:54814650-54814669 | None:intergenic | 45.0% | |
| AGGTTTGCGAAGTTACTGCT+TGG | - | chr5_4:54814926-54814945 | Msa0857890:CDS | 45.0% | |
| ! | CTGCTTGGTGAAGATATGTC+AGG | - | chr5_4:54814941-54814960 | Msa0857890:CDS | 45.0% |
| GATATGTCAGGGTCTGGAAA+AGG | - | chr5_4:54814953-54814972 | Msa0857890:CDS | 45.0% | |
| CGAACTCTGATCACGATATG+CGG | - | chr5_4:54815442-54815461 | Msa0857890:intron | 45.0% | |
| ! | CTTTTCTTTTTCCGGATGGC+AGG | + | chr5_4:54815884-54815903 | None:intergenic | 45.0% |
| AGTGGCAGAGAGAAATGGAT+TGG | - | chr5_4:54816194-54816213 | Msa0857890:CDS | 45.0% | |
| TCCTGATGGTAGTAAGCTAG+AGG | - | chr5_4:54816270-54816289 | Msa0857890:CDS | 45.0% | |
| ! | ACCTCTAGCTTACTACCATC+AGG | + | chr5_4:54816274-54816293 | None:intergenic | 45.0% |
| !!! | GCGACCGTTTTTTAGAACCT+TGG | + | chr5_4:54816713-54816732 | None:intergenic | 45.0% |
| CGTTAAGGTTGTCGCGATTT+CGG | - | chr5_4:54816750-54816769 | Msa0857890:intron | 45.0% | |
| GGACGCTGCGATACAAATAA+CGG | - | chr5_4:54816780-54816799 | Msa0857890:intron | 45.0% | |
| TGGCTCAGCTGGAATAAATC+TGG | - | chr5_4:54817153-54817172 | Msa0857890:intron | 45.0% | |
| TGGACCACTTGATGCATCAA+GGG | - | chr5_4:54817173-54817192 | Msa0857890:intron | 45.0% | |
| GGGTGCAGATATGAAAAAGG+GGG | - | chr5_4:54817264-54817283 | Msa0857890:intron | 45.0% | |
| AAATCGCCGTTACAGCGTTA+CGG | + | chr5_4:54817635-54817654 | None:intergenic | 45.0% | |
| !! | TTACAAATCGGTATCGGCAG+CGG | + | chr5_4:54817706-54817725 | None:intergenic | 45.0% |
| !! | CTGCCGATACCGATTTGTAA+CGG | - | chr5_4:54817706-54817725 | Msa0857890:intron | 45.0% |
| ! | CACGGATTGCCTACTATCAA+AGG | + | chr5_4:54817776-54817795 | None:intergenic | 45.0% |
| TTGTCGAGTTTACGTAGAGC+TGG | + | chr5_4:54817900-54817919 | None:intergenic | 45.0% | |
| ! | GTTCCACTGCTATGGAGTTT+TGG | - | chr5_4:54818035-54818054 | Msa0857890:CDS | 45.0% |
| TCTTGAGTTCTCACTGAGAC+CGG | + | chr5_4:54818173-54818192 | None:intergenic | 45.0% | |
| ! | AGGGTATCCAAATACGACTC+GGG | + | chr5_4:54818286-54818305 | None:intergenic | 45.0% |
| TCAGAATGGAAGAACGTGCT+TGG | - | chr5_4:54818496-54818515 | Msa0857890:intron | 45.0% | |
| CAGAATGGAAGAACGTGCTT+GGG | - | chr5_4:54818497-54818516 | Msa0857890:intron | 45.0% | |
| CTCAAGTGCAACATGCTCAT+TGG | + | chr5_4:54818594-54818613 | None:intergenic | 45.0% | |
| CTGGCGCCATACATAAATTG+CGG | + | chr5_4:54818636-54818655 | None:intergenic | 45.0% | |
| ! | GTGGTTTAGAGTGAGATCTC+TGG | + | chr5_4:54818655-54818674 | None:intergenic | 45.0% |
| ACTTTGTAGTCGAACGGCTA+GGG | + | chr5_4:54818685-54818704 | None:intergenic | 45.0% | |
| GTTCGACTACAAAGTCATCC+TGG | - | chr5_4:54818690-54818709 | Msa0857890:intron | 45.0% | |
| TAAGTCCTTCACAATGTCCC+AGG | + | chr5_4:54818711-54818730 | None:intergenic | 45.0% | |
| !!! | CTCAAGAGTTTTGGAGAGCA+TGG | - | chr5_4:54819132-54819151 | Msa0857890:intron | 45.0% |
| GAAGGACTAATTAGTGGCAC+AGG | + | chr5_4:54819340-54819359 | None:intergenic | 45.0% | |
| !! | ATTATACATATATAAAAAAT+TGG | - | chr5_4:54815154-54815173 | Msa0857890:CDS | 5.0% |
| !!! | TAAAAACTTTTTTTTTTTTA+GGG | + | chr5_4:54815202-54815221 | None:intergenic | 5.0% |
| ATCTGAGCAACACGATCCAG+TGG | + | chr5_4:54814585-54814604 | None:intergenic | 50.0% | |
| GGTGAAGATATGTCAGGGTC+TGG | - | chr5_4:54814947-54814966 | Msa0857890:CDS | 50.0% | |
| GTATCCAGGACCCTAGGTTA+GGG | - | chr5_4:54815067-54815086 | Msa0857890:CDS | 50.0% | |
| TATCCAGGACCCTAGGTTAG+GGG | - | chr5_4:54815068-54815087 | Msa0857890:CDS | 50.0% | |
| AATCTGCACCCCCTAACCTA+GGG | + | chr5_4:54815080-54815099 | None:intergenic | 50.0% | |
| TAATCTGCACCCCCTAACCT+AGG | + | chr5_4:54815081-54815100 | None:intergenic | 50.0% | |
| AGCTTAAACCTACTCAGGGG+CGG | + | chr5_4:54816022-54816041 | None:intergenic | 50.0% | |
| CAGCAGGTAAATTGAGTCCC+TGG | + | chr5_4:54816532-54816551 | None:intergenic | 50.0% | |
| TGTCGCGATTTCGGCTGTAA+CGG | - | chr5_4:54816759-54816778 | Msa0857890:intron | 50.0% | |
| CTGGACCACTTGATGCATCA+AGG | - | chr5_4:54817172-54817191 | Msa0857890:intron | 50.0% | |
| GGACCACTTGATGCATCAAG+GGG | - | chr5_4:54817174-54817193 | Msa0857890:intron | 50.0% | |
| TGGCTGTGATGAGCCTATGT+AGG | + | chr5_4:54817213-54817232 | None:intergenic | 50.0% | |
| AGTCTGAACGGAGTCCGTAA+CGG | - | chr5_4:54817567-54817586 | Msa0857890:intron | 50.0% | |
| CGGCCGTTACAAATCGGTAT+CGG | + | chr5_4:54817712-54817731 | None:intergenic | 50.0% | |
| ACGGGACGTTACCGCAAAAA+CGG | + | chr5_4:54817732-54817751 | None:intergenic | 50.0% | |
| !! | CATCTGGTGCCACAATTCCT+TGG | + | chr5_4:54818069-54818088 | None:intergenic | 50.0% |
| ATTGTGGCACCAGATGCAGA+TGG | - | chr5_4:54818073-54818092 | Msa0857890:CDS | 50.0% | |
| CAAGAGAAATCAGCGGCAAG+AGG | - | chr5_4:54818111-54818130 | Msa0857890:CDS | 50.0% | |
| GGAAGTTCCCGAGTCGTATT+TGG | - | chr5_4:54818276-54818295 | Msa0857890:intron | 50.0% | |
| GCACTCTTGAGAGAACTGGT+CGG | + | chr5_4:54818549-54818568 | None:intergenic | 50.0% | |
| GCAAGCACTCTTGAGAGAAC+TGG | + | chr5_4:54818553-54818572 | None:intergenic | 50.0% | |
| GACTTTGTAGTCGAACGGCT+AGG | + | chr5_4:54818686-54818705 | None:intergenic | 50.0% | |
| GTCATCCTGGGACATTGTGA+AGG | - | chr5_4:54818703-54818722 | Msa0857890:intron | 50.0% | |
| TTCATTGAAGCAGCGCTTCC+CGG | - | chr5_4:54818787-54818806 | Msa0857890:intron | 50.0% | |
| ! | AAGCTTATGCACGGGGTACT+GGG | + | chr5_4:54819001-54819020 | None:intergenic | 50.0% |
| GGAGTTACCTCTCCCTTTGA+AGG | + | chr5_4:54819358-54819377 | None:intergenic | 50.0% | |
| ! | AAACCTCAACGTCGCGGTTT+TGG | - | chr5_4:54819409-54819428 | Msa0857890:intron | 50.0% |
| GTAGGTTCAGTGGCGTATCC+AGG | - | chr5_4:54815053-54815072 | Msa0857890:CDS | 55.0% | |
| CGTATCCAGGACCCTAGGTT+AGG | - | chr5_4:54815066-54815085 | Msa0857890:CDS | 55.0% | |
| ATCCAGGACCCTAGGTTAGG+GGG | - | chr5_4:54815069-54815088 | Msa0857890:CDS | 55.0% | |
| GGACCCCTTGATGCATCAAG+TGG | + | chr5_4:54817180-54817199 | None:intergenic | 55.0% | |
| CTTCCTTCCATGTTGACCGC+GGG | + | chr5_4:54817330-54817349 | None:intergenic | 55.0% | |
| CCTTCCTTCCATGTTGACCG+CGG | + | chr5_4:54817331-54817350 | None:intergenic | 55.0% | |
| CGGTCAACATGGAAGGAAGG+AGG | - | chr5_4:54817331-54817350 | Msa0857890:intron | 55.0% | |
| GGCGTTCCGTAACGCTGTAA+CGG | - | chr5_4:54817626-54817645 | Msa0857890:intron | 55.0% | |
| GAGGCTGATCCATCTGCATC+TGG | + | chr5_4:54818085-54818104 | None:intergenic | 55.0% | |
| ATCAGCGGCAAGAGGAGAAG+TGG | - | chr5_4:54818119-54818138 | Msa0857890:CDS | 55.0% | |
| TCATTGAAGCAGCGCTTCCC+GGG | - | chr5_4:54818788-54818807 | Msa0857890:intron | 55.0% | |
| GAAGCTTATGCACGGGGTAC+TGG | + | chr5_4:54819002-54819021 | None:intergenic | 55.0% | |
| ACACCAAAACCGCGACGTTG+AGG | + | chr5_4:54819415-54819434 | None:intergenic | 55.0% | |
| AGTGGCGTATCCAGGACCCT+AGG | - | chr5_4:54815061-54815080 | Msa0857890:CDS | 60.0% | |
| CACTCAGCGTACCTGCCATC+CGG | - | chr5_4:54815870-54815889 | Msa0857890:intron | 60.0% | |
| AAAACTGCAGGTGGGACCCG+CGG | - | chr5_4:54817311-54817330 | Msa0857890:intron | 60.0% | |
| CCGCGGTCAACATGGAAGGA+AGG | - | chr5_4:54817328-54817347 | Msa0857890:intron | 60.0% | |
| GAGTCCGTAACGGCGTTTCG+CGG | - | chr5_4:54817577-54817596 | Msa0857890:intron | 60.0% | |
| ACGACCGCGAAACGCCGTTA+CGG | + | chr5_4:54817603-54817622 | None:intergenic | 60.0% | |
| ACGGCGTTTCGCGGTCGTAA+CGG | - | chr5_4:54817605-54817624 | Msa0857890:intron | 60.0% | |
| AGCGGCAAGAGGAGAAGTGG+TGG | - | chr5_4:54818122-54818141 | Msa0857890:CDS | 60.0% | |
| TTCTCACTGAGACCGGCAGG+AGG | + | chr5_4:54818166-54818185 | None:intergenic | 60.0% | |
| GAGTTCTCACTGAGACCGGC+AGG | + | chr5_4:54818169-54818188 | None:intergenic | 60.0% | |
| GAACGGCTAGGGTAGAGTGG+TGG | + | chr5_4:54818674-54818693 | None:intergenic | 60.0% | |
| GTCGAACGGCTAGGGTAGAG+TGG | + | chr5_4:54818677-54818696 | None:intergenic | 60.0% | |
| CACCCCCTAACCTAGGGTCC+TGG | + | chr5_4:54815074-54815093 | None:intergenic | 65.0% | |
| GGTGTGCAGGTGCACTCCCT+GGG | - | chr5_4:54815984-54816003 | Msa0857890:intron | 65.0% | |
| TACTCAGGGGCGGAGCTAGG+TGG | + | chr5_4:54816012-54816031 | None:intergenic | 65.0% | |
| ACCTAGCTCCGCCCCTGAGT+AGG | - | chr5_4:54816011-54816030 | Msa0857890:CDS | 65.0% | |
| ACCTACTCAGGGGCGGAGCT+AGG | + | chr5_4:54816015-54816034 | None:intergenic | 65.0% | |
| TCGCGATCGCGGTCGCGTTA+AGG | - | chr5_4:54816735-54816754 | Msa0857890:intron | 65.0% | |
| GGACCCGCGGTCAACATGGA+AGG | - | chr5_4:54817324-54817343 | Msa0857890:intron | 65.0% | |
| ACGGCCGCGAAACGCCGTTA+CGG | + | chr5_4:54817584-54817603 | None:intergenic | 65.0% | |
| ACGGCGTTTCGCGGCCGTAA+CGG | - | chr5_4:54817586-54817605 | Msa0857890:intron | 65.0% | |
| ! | CAGGAGGCACACGGGGTACT+GGG | + | chr5_4:54818150-54818169 | None:intergenic | 65.0% |
| ! | TGAGACCGGCAGGAGGCACA+CGG | + | chr5_4:54818159-54818178 | None:intergenic | 65.0% |
| GGGTGTGCAGGTGCACTCCC+TGG | - | chr5_4:54815983-54816002 | Msa0857890:intron | 70.0% | |
| GCGGAGCTAGGTGGTGCCCA+GGG | + | chr5_4:54816003-54816022 | None:intergenic | 70.0% | |
| AACGGTCGCGGTCGCGATCG+CGG | - | chr5_4:54816724-54816743 | Msa0857890:intron | 70.0% | |
| GGTGGGACCCGCGGTCAACA+TGG | - | chr5_4:54817320-54817339 | Msa0857890:intron | 70.0% | |
| GCGGCCGTAACGGCGTTTCG+CGG | - | chr5_4:54817596-54817615 | Msa0857890:intron | 70.0% | |
| ! | GCAGGAGGCACACGGGGTAC+TGG | + | chr5_4:54818151-54818170 | None:intergenic | 70.0% |
| GTACCCCGTGTGCCTCCTGC+CGG | - | chr5_4:54818151-54818170 | Msa0857890:CDS | 70.0% | |
| ! | AGACCGGCAGGAGGCACACG+GGG | + | chr5_4:54818157-54818176 | None:intergenic | 70.0% |
| ! | GAGACCGGCAGGAGGCACAC+GGG | + | chr5_4:54818158-54818177 | None:intergenic | 70.0% |
| GGCGGAGCTAGGTGGTGCCC+AGG | + | chr5_4:54816004-54816023 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 54814419 | 54819897 | 54814419 | ID=Msa0857890;Name=Msa0857890 |
| chr5_4 | mRNA | 54814419 | 54819897 | 54814419 | ID=Msa0857890-mRNA-1;Parent=Msa0857890;Name=Msa0857890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=102|0.71|0.87|0.87|1|1|8|303|614 |
| chr5_4 | exon | 54814419 | 54815213 | 54814419 | ID=Msa0857890-mRNA-1:exon:16843;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54815460 | 54815816 | 54815460 | ID=Msa0857890-mRNA-1:exon:16842;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54816004 | 54816294 | 54816004 | ID=Msa0857890-mRNA-1:exon:16841;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54816387 | 54816461 | 54816387 | ID=Msa0857890-mRNA-1:exon:16840;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54816882 | 54816995 | 54816882 | ID=Msa0857890-mRNA-1:exon:16839;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54818025 | 54818179 | 54818025 | ID=Msa0857890-mRNA-1:exon:16838;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54819294 | 54819416 | 54819294 | ID=Msa0857890-mRNA-1:exon:16837;Parent=Msa0857890-mRNA-1 |
| chr5_4 | exon | 54819558 | 54819897 | 54819558 | ID=Msa0857890-mRNA-1:exon:16836;Parent=Msa0857890-mRNA-1 |
| chr5_4 | five_prime_UTR | 54819796 | 54819897 | 54819796 | ID=Msa0857890-mRNA-1:five_prime_utr;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54819558 | 54819795 | 54819558 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54819294 | 54819416 | 54819294 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54818025 | 54818179 | 54818025 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54816882 | 54816995 | 54816882 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54816387 | 54816461 | 54816387 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54816004 | 54816294 | 54816004 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54815460 | 54815816 | 54815460 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | CDS | 54814722 | 54815213 | 54814722 | ID=Msa0857890-mRNA-1:cds;Parent=Msa0857890-mRNA-1 |
| chr5_4 | three_prime_UTR | 54814419 | 54814721 | 54814419 | ID=Msa0857890-mRNA-1:three_prime_utr;Parent=Msa0857890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
