AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1177340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1177340 MtrunA17_Chr8g0347271 94.809 366 19 0 1 366 115 480 0.0 727
Msa1177340 MtrunA17_Chr8g0347281 92.623 366 27 0 1 366 114 479 0.0 715
Msa1177340 MtrunA17_Chr7g0275511 60.714 364 133 3 3 359 115 475 1.23e-159 456
Msa1177340 MtrunA17_Chr6g0449931 52.459 366 168 3 2 362 106 470 1.32e-127 374
Msa1177340 MtrunA17_Chr1g0153451 49.176 364 176 4 8 366 111 470 4.44e-126 370
Msa1177340 MtrunA17_Chr8g0336651 51.366 366 166 4 6 362 884 1246 3.53e-124 386
Msa1177340 MtrunA17_Chr8g0336651 50.420 357 169 4 8 359 111 464 1.48e-119 374
Msa1177340 MtrunA17_Chr8g0336651 48.070 285 106 4 85 362 528 777 2.43e-76 256
Msa1177340 MtrunA17_Chr8g0336741 46.944 360 185 3 8 363 118 475 1.04e-123 365
Msa1177340 MtrunA17_Chr8g0336691 51.099 364 168 3 6 362 116 476 2.72e-121 380
Msa1177340 MtrunA17_Chr8g0336691 50.693 361 174 2 6 362 1022 1382 2.80e-121 380
Msa1177340 MtrunA17_Chr8g0336691 48.352 364 150 5 6 362 583 915 4.77e-109 347
Msa1177340 MtrunA17_Chr8g0336731 46.961 362 184 4 8 364 137 495 1.99e-120 357
Msa1177340 MtrunA17_Chr7g0232401 48.611 360 177 4 2 356 108 464 1.58e-119 354
Msa1177340 MtrunA17_Chr7g0232411 47.091 361 182 4 6 360 109 466 3.78e-119 353
Msa1177340 MtrunA17_Chr8g0334861 47.671 365 179 5 3 359 103 463 7.89e-119 352
Msa1177340 MtrunA17_Chr7g0232391 47.091 361 182 4 6 360 109 466 3.07e-118 350
Msa1177340 MtrunA17_Chr6g0459311 47.554 368 185 7 1 363 111 475 9.24e-115 342
Msa1177340 MtrunA17_Chr8g0339631 44.920 374 193 5 2 366 106 475 9.80e-114 339
Msa1177340 MtrunA17_Chr7g0232311 48.711 349 174 4 17 362 120 466 1.30e-113 338
Msa1177340 MtrunA17_Chr6g0486251 47.397 365 184 7 1 360 104 465 3.38e-113 337
Msa1177340 MtrunA17_Chr6g0486201 47.397 365 184 7 1 360 104 465 3.38e-113 337
Msa1177340 MtrunA17_Chr8g0339461 46.301 365 188 4 2 358 106 470 4.58e-113 337
Msa1177340 MtrunA17_Chr8g0339451 46.301 365 188 4 2 358 98 462 1.02e-112 336
Msa1177340 MtrunA17_Chr8g0334851 44.236 373 194 4 2 365 108 475 1.57e-112 336
Msa1177340 MtrunA17_Chr8g0335161 46.575 365 186 6 1 358 103 465 1.57e-110 331
Msa1177340 MtrunA17_Chr8g0373301 44.199 362 187 5 8 361 114 468 1.55e-109 328
Msa1177340 MtrunA17_Chr7g0232331 44.505 364 192 5 6 362 109 469 3.06e-109 327
Msa1177340 MtrunA17_Chr7g0232341 44.505 364 192 6 6 362 109 469 4.88e-109 327
Msa1177340 MtrunA17_Chr8g0335141 44.687 367 194 7 1 360 105 469 4.88e-107 322
Msa1177340 MtrunA17_Chr8g0361371 43.213 361 194 8 8 360 114 471 3.87e-97 296
Msa1177340 MtrunA17_Chr8g0339601 44.479 326 173 4 41 358 4 329 5.68e-96 289
Msa1177340 MtrunA17_Chr8g0370941 43.085 376 187 7 7 356 111 485 1.95e-95 293
Msa1177340 MtrunA17_Chr8g0334831 42.287 376 198 9 8 366 113 486 9.76e-94 288
Msa1177340 MtrunA17_Chr8g0339441 42.697 356 159 6 8 358 113 428 2.15e-93 286
Msa1177340 MtrunA17_Chr1g0153461 54.587 218 98 1 149 366 3 219 7.89e-85 256
Msa1177340 MtrunA17_Chr3g0079731 39.410 373 210 6 6 363 113 484 4.48e-83 261
Msa1177340 MtrunA17_Chr5g0403641 40.000 370 166 9 7 356 166 499 3.64e-80 254
Msa1177340 MtrunA17_Chr6g0462551 36.188 362 214 4 6 360 114 465 6.09e-79 250
Msa1177340 MtrunA17_Chr6g0462531 37.637 364 205 5 6 360 115 465 2.24e-77 245
Msa1177340 MtrunA17_Chr6g0462541 38.017 363 200 6 8 360 117 464 5.15e-77 245
Msa1177340 MtrunA17_Chr6g0462521 37.293 362 200 5 6 360 110 451 9.18e-77 244
Msa1177340 MtrunA17_Chr2g0302961 40.110 364 191 11 3 355 114 461 9.17e-75 239
Msa1177340 MtrunA17_Chr7g0232351 44.161 274 143 5 6 273 109 378 6.45e-74 234
Msa1177340 MtrunA17_Chr6g0462571 35.714 364 212 4 6 360 112 462 8.25e-74 236
Msa1177340 MtrunA17_Chr2g0302991 38.859 368 194 12 3 355 107 458 6.43e-71 229
Msa1177340 MtrunA17_Chr5g0448521 36.986 365 200 13 5 348 101 456 1.44e-62 207
Msa1177340 MtrunA17_Chr5g0429681 35.695 367 203 9 3 355 148 495 1.33e-59 200
Msa1177340 MtrunA17_Chr5g0442521 35.501 369 212 11 6 355 110 471 2.10e-59 199
Msa1177340 MtrunA17_Chr5g0442491 34.605 367 216 9 6 355 111 470 2.16e-58 196
Msa1177340 MtrunA17_Chr5g0429711 34.771 371 203 12 1 355 110 457 1.74e-57 194
Msa1177340 MtrunA17_Chr5g0442541 34.959 369 212 12 6 355 102 461 2.55e-57 193
Msa1177340 MtrunA17_Chr5g0442561 34.324 370 213 11 6 355 109 468 3.34e-56 191
Msa1177340 MtrunA17_Chr8g0337381 63.704 135 45 2 233 366 1 132 9.44e-56 179
Msa1177340 MtrunA17_Chr5g0442581 34.574 376 206 13 6 355 111 472 9.50e-56 191
Msa1177340 MtrunA17_Chr5g0442601 35.356 379 199 11 5 355 511 871 1.77e-55 195
Msa1177340 MtrunA17_Chr5g0442601 34.783 299 162 7 5 296 61 333 1.42e-41 155
Msa1177340 MtrunA17_Chr4g0053501 32.337 368 223 9 6 358 111 467 5.44e-55 188
Msa1177340 MtrunA17_Chr4g0044511 35.792 366 192 14 8 348 146 493 1.65e-53 184
Msa1177340 MtrunA17_Chr4g0050341 34.367 387 199 12 6 360 128 491 9.39e-53 182
Msa1177340 MtrunA17_Chr4g0053321 32.520 369 221 11 6 358 126 482 3.08e-52 181
Msa1177340 MtrunA17_Chr3g0078841 32.368 380 212 12 6 358 119 480 4.21e-52 180
Msa1177340 MtrunA17_Chr3g0112771 37.500 312 160 11 45 348 156 440 9.69e-52 178
Msa1177340 MtrunA17_Chr5g0442511 32.123 358 200 12 6 348 153 482 3.72e-50 175
Msa1177340 MtrunA17_Chr6g0454151 31.129 363 212 9 6 348 122 466 1.42e-49 173
Msa1177340 MtrunA17_Chr8g0366391 32.796 372 209 11 8 355 119 473 1.54e-48 171
Msa1177340 MtrunA17_Chr3g0092641 32.869 359 198 9 6 341 120 458 2.09e-48 170
Msa1177340 MtrunA17_Chr8g0359821 30.607 379 219 11 6 358 120 480 3.65e-48 169
Msa1177340 MtrunA17_Chr1g0159551 38.618 246 141 4 105 348 211 448 5.57e-48 168
Msa1177340 MtrunA17_Chr5g0426431 33.983 359 194 10 6 341 120 458 1.13e-47 168
Msa1177340 MtrunA17_Chr1g0207981 30.997 371 210 10 3 352 120 465 3.38e-47 167
Msa1177340 MtrunA17_Chr3g0079711 47.340 188 95 3 175 359 2 188 3.69e-47 159
Msa1177340 MtrunA17_Chr4g0044521 32.021 381 214 13 1 355 101 462 7.96e-47 166
Msa1177340 MtrunA17_Chr8g0336331 31.053 380 217 10 6 358 118 479 1.26e-46 165
Msa1177340 MtrunA17_Chr7g0265151 34.828 290 152 8 85 348 194 472 2.17e-46 165
Msa1177340 MtrunA17_Chr5g0401721 31.793 368 205 14 8 352 119 463 2.70e-46 164
Msa1177340 MtrunA17_Chr6g0454201 32.718 379 211 11 6 358 123 483 3.19e-46 164
Msa1177340 MtrunA17_Chr1g0173121 39.024 246 139 5 105 348 215 451 3.46e-46 164
Msa1177340 MtrunA17_Chr6g0464841 30.000 380 210 11 4 356 101 451 1.21e-45 162
Msa1177340 MtrunA17_Chr8g0382021 32.132 333 189 7 29 348 169 477 1.37e-45 162
Msa1177340 MtrunA17_Chr6g0454341 30.055 366 215 9 6 348 119 466 1.63e-45 162
Msa1177340 MtrunA17_Chr6g0454191 30.343 379 220 9 6 358 123 483 2.11e-45 162
Msa1177340 MtrunA17_Chr4g0042931 33.333 369 221 9 6 360 107 464 2.47e-45 161
Msa1177340 MtrunA17_Chr6g0454141 30.607 379 219 9 6 358 122 482 4.32e-45 161
Msa1177340 MtrunA17_Chr5g0414331 32.609 368 206 9 2 352 104 446 5.63e-45 160
Msa1177340 MtrunA17_Chr6g0464861 35.688 269 138 7 102 356 203 450 6.35e-45 160
Msa1177340 MtrunA17_Chr8g0361411 32.337 368 204 12 7 352 102 446 8.96e-45 160
Msa1177340 MtrunA17_Chr6g0454301 30.000 380 221 10 6 358 372 733 1.39e-44 163
Msa1177340 MtrunA17_Chr6g0454301 31.624 234 131 6 126 348 3 218 1.40e-32 129
Msa1177340 MtrunA17_Chr5g0414321 32.267 375 206 10 2 356 102 448 2.13e-44 159
Msa1177340 MtrunA17_Chr7g0217881 32.796 372 202 12 6 358 122 464 2.60e-44 159
Msa1177340 MtrunA17_Chr7g0265141 33.115 305 166 8 81 360 194 485 3.44e-44 159
Msa1177340 MtrunA17_Chr6g0464881 27.957 372 225 10 2 356 106 451 3.45e-44 158
Msa1177340 MtrunA17_Chr6g0464921 28.455 369 220 9 6 356 110 452 1.46e-43 156
Msa1177340 MtrunA17_Chr2g0329111 31.830 377 217 15 3 355 115 475 1.74e-43 157
Msa1177340 MtrunA17_Chr4g0066221 30.563 373 219 12 8 355 119 476 1.86e-43 157
Msa1177340 MtrunA17_Chr5g0426401 34.448 299 161 9 66 348 20 299 3.62e-43 152
Msa1177340 MtrunA17_Chr6g0454401 31.053 380 216 11 6 358 123 483 4.37e-43 155
Msa1177340 MtrunA17_Chr6g0454291 31.662 379 215 12 6 358 119 479 4.40e-43 155
Msa1177340 MtrunA17_Chr6g0454321 29.086 361 215 10 6 343 119 461 6.24e-43 157
Msa1177340 MtrunA17_Chr7g0265051 37.269 271 137 9 104 352 218 477 6.30e-43 155
Msa1177340 MtrunA17_Chr7g0243801 32.275 378 220 12 9 364 118 481 6.65e-43 155
Msa1177340 MtrunA17_Chr4g0042891 31.215 362 207 10 21 360 125 466 8.64e-43 155
Msa1177340 MtrunA17_Chr6g0454121 30.081 369 218 10 6 352 121 471 1.22e-42 154
Msa1177340 MtrunA17_Chr7g0243871 32.047 337 181 9 44 364 173 477 1.37e-42 154
Msa1177340 MtrunA17_Chr4g0032331 33.807 352 204 12 5 348 108 438 1.56e-42 154
Msa1177340 MtrunA17_Chr5g0412111 30.446 381 212 13 1 355 104 457 1.78e-42 154
Msa1177340 MtrunA17_Chr7g0243771 32.011 378 221 12 9 364 117 480 2.72e-42 154
Msa1177340 MtrunA17_Chr5g0432731 33.898 295 162 7 66 348 12 285 3.51e-42 149
Msa1177340 MtrunA17_Chr7g0243681 31.467 375 208 12 9 355 122 475 5.00e-42 153
Msa1177340 MtrunA17_Chr6g0464871 35.075 268 141 7 102 356 216 463 6.97e-42 152
Msa1177340 MtrunA17_Chr6g0453951 30.137 365 215 10 6 348 169 515 7.52e-42 153
Msa1177340 MtrunA17_Chr6g0454131 29.268 369 221 11 6 352 121 471 7.64e-42 152
Msa1177340 MtrunA17_Chr1g0207951 28.926 363 217 9 6 352 764 1101 7.94e-42 156
Msa1177340 MtrunA17_Chr1g0207951 28.333 360 195 8 20 352 240 563 2.06e-40 152
Msa1177340 MtrunA17_Chr8g0380531 30.239 377 222 11 1 360 106 458 8.51e-42 152
Msa1177340 MtrunA17_Chr6g0454261 28.496 379 227 11 6 358 122 482 1.06e-41 152
Msa1177340 MtrunA17_Chr8g0365811 30.133 375 209 12 6 352 601 950 1.14e-41 155
Msa1177340 MtrunA17_Chr8g0365811 29.321 324 202 9 20 328 133 444 3.17e-37 142
Msa1177340 MtrunA17_Chr5g0431371 34.000 300 163 7 65 352 165 441 2.44e-41 150
Msa1177340 MtrunA17_Chr5g0431441 34.564 298 155 10 66 348 182 454 2.62e-41 150
Msa1177340 MtrunA17_Chr3g0121991 29.919 371 231 8 3 352 176 538 2.99e-41 152
Msa1177340 MtrunA17_Chr4g0066151 34.672 274 149 10 102 352 206 472 3.20e-41 150
Msa1177340 MtrunA17_Chr2g0278711 32.550 298 172 7 66 349 184 466 3.93e-41 150
Msa1177340 MtrunA17_Chr7g0249981 33.333 267 147 5 102 356 216 463 4.08e-41 150
Msa1177340 MtrunA17_Chr7g0243631 31.053 380 208 12 9 355 124 482 4.76e-41 150
Msa1177340 MtrunA17_Chr7g0218791 30.707 368 211 13 2 356 108 444 5.14e-41 149
Msa1177340 MtrunA17_Chr3g0122001 32.312 359 202 11 21 352 601 945 5.40e-41 154
Msa1177340 MtrunA17_Chr3g0122001 31.579 361 209 11 21 355 121 469 3.59e-39 148
Msa1177340 MtrunA17_Chr1g0207931 33.333 261 151 6 99 348 238 486 5.91e-41 150
Msa1177340 MtrunA17_Chr3g0118771 32.886 298 168 6 66 348 197 477 7.26e-41 150
Msa1177340 MtrunA17_Chr8g0377921 31.903 373 208 13 6 352 104 456 7.66e-41 149
Msa1177340 MtrunA17_Chr7g0243781 32.738 336 171 11 41 355 170 471 8.70e-41 149
Msa1177340 MtrunA17_Chr5g0419761 35.739 291 151 10 80 348 198 474 8.99e-41 149
Msa1177340 MtrunA17_Chr4g0066261 30.811 370 193 16 26 355 131 477 1.16e-40 149
Msa1177340 MtrunA17_Chr5g0431361 32.333 300 168 6 65 352 170 446 1.25e-40 149
Msa1177340 MtrunA17_Chr6g0454181 30.343 379 220 11 6 358 122 482 1.29e-40 149
Msa1177340 MtrunA17_Chr7g0265101 34.783 276 138 8 104 352 219 479 1.57e-40 149
Msa1177340 MtrunA17_Chr5g0440421 32.180 289 169 7 83 352 206 486 1.83e-40 149
Msa1177340 MtrunA17_Chr1g0207971 28.453 362 193 10 20 352 122 446 1.94e-40 148
Msa1177340 MtrunA17_Chr5g0431401 32.343 303 170 6 65 355 165 444 2.01e-40 148
Msa1177340 MtrunA17_Chr6g0452771 29.288 379 224 9 6 358 122 482 2.11e-40 148
Msa1177340 MtrunA17_Chr6g0453961 29.211 380 224 10 6 358 131 492 2.27e-40 149
Msa1177340 MtrunA17_Chr5g0412101 32.275 378 198 16 1 348 110 459 2.49e-40 148
Msa1177340 MtrunA17_Chr3g0118691 34.241 257 139 5 105 348 232 471 3.61e-40 148
Msa1177340 MtrunA17_Chr6g0454211 29.474 380 222 11 6 358 409 769 3.93e-40 150
Msa1177340 MtrunA17_Chr6g0454211 28.571 322 149 12 22 321 8 270 7.27e-23 100
Msa1177340 MtrunA17_Chr7g0218811 29.412 357 216 11 4 352 114 442 5.72e-40 147
Msa1177340 MtrunA17_Chr6g0482061 30.548 347 215 8 28 360 146 480 6.20e-40 147
Msa1177340 MtrunA17_Chr3g0118721 34.241 257 139 5 105 348 39 278 6.36e-40 143
Msa1177340 MtrunA17_Chr5g0420801 33.459 266 157 6 104 362 211 463 6.58e-40 147
Msa1177340 MtrunA17_Chr6g0449991 38.983 236 118 4 2 231 106 321 6.74e-40 144
Msa1177340 MtrunA17_Chr8g0355221 30.052 386 203 11 9 355 125 482 8.62e-40 147
Msa1177340 MtrunA17_Chr5g0431421 32.333 300 168 6 65 352 165 441 9.55e-40 146
Msa1177340 MtrunA17_Chr7g0218821 29.014 355 220 10 4 352 115 443 1.19e-39 146
Msa1177340 MtrunA17_Chr6g0454271 32.753 287 162 8 75 348 7 275 1.32e-39 142
Msa1177340 MtrunA17_Chr6g0454331 31.399 293 168 7 81 358 207 481 1.62e-39 146
Msa1177340 MtrunA17_Chr5g0412131 30.952 378 202 15 1 348 110 458 2.03e-39 145
Msa1177340 MtrunA17_Chr7g0250001 28.032 371 226 9 2 356 99 444 2.19e-39 145
Msa1177340 MtrunA17_Chr4g0060511 35.740 277 140 8 104 355 220 483 2.57e-39 145
Msa1177340 MtrunA17_Chr4g0011051 29.630 378 216 14 7 352 121 480 3.70e-39 145
Msa1177340 MtrunA17_Chr3g0112761 30.214 374 197 14 2 357 120 447 3.94e-39 144
Msa1177340 MtrunA17_Chr8g0369341 35.294 238 140 4 128 362 247 473 5.00e-39 144
Msa1177340 MtrunA17_Chr3g0098111 29.462 353 214 11 20 355 131 465 5.38e-39 144
Msa1177340 MtrunA17_Chr7g0249961 33.333 252 137 4 117 356 24 256 6.81e-39 139
Msa1177340 MtrunA17_Chr5g0423981 30.645 310 180 9 66 358 156 447 6.92e-39 144
Msa1177340 MtrunA17_Chr4g0066131 34.815 270 146 11 102 348 201 463 7.74e-39 144
Msa1177340 MtrunA17_Chr7g0265041 33.125 320 175 11 52 348 174 477 1.12e-38 144
Msa1177340 MtrunA17_Chr3g0118671 34.630 257 138 7 105 348 223 462 1.47e-38 143
Msa1177340 MtrunA17_Chr6g0454361 30.137 365 215 10 6 348 123 469 2.55e-38 143
Msa1177340 MtrunA17_Chr1g0161351 32.824 262 153 5 105 355 244 493 3.33e-38 143
Msa1177340 MtrunA17_Chr4g0044501 30.749 374 211 14 8 355 120 471 3.93e-38 142
Msa1177340 MtrunA17_Chr7g0275681 31.475 305 160 8 65 348 193 469 3.95e-38 142
Msa1177340 MtrunA17_Chr6g0454221 33.617 235 126 8 126 348 3 219 3.98e-38 138
Msa1177340 MtrunA17_Chr8g0377941 34.902 255 138 6 105 352 221 454 4.01e-38 142
Msa1177340 MtrunA17_Chr8g0336321 34.234 333 181 10 20 333 126 439 4.68e-38 142
Msa1177340 MtrunA17_Chr2g0307961 36.538 260 135 8 104 352 221 461 7.24e-38 141
Msa1177340 MtrunA17_Chr1g0207861 32.824 262 153 6 105 355 215 464 8.77e-38 141
Msa1177340 MtrunA17_Chr5g0393591 33.735 249 122 6 105 352 222 428 1.09e-37 140
Msa1177340 MtrunA17_Chr8g0336251 33.934 333 182 10 20 333 126 439 1.25e-37 140
Msa1177340 MtrunA17_Chr5g0401851 29.351 385 226 10 9 364 121 488 1.29e-37 141
Msa1177340 MtrunA17_Chr4g0044481 38.916 203 100 5 104 296 209 397 1.36e-37 140
Msa1177340 MtrunA17_Chr6g0454171 30.409 342 172 12 22 348 8 298 1.71e-37 137
Msa1177340 MtrunA17_Chr6g0463861 32.852 277 156 10 102 355 200 469 1.77e-37 140
Msa1177340 MtrunA17_Chr7g0235051 35.612 278 146 7 100 355 183 449 2.16e-37 140
Msa1177340 MtrunA17_Chr5g0427571 36.090 266 144 6 81 333 21 273 2.58e-37 136
Msa1177340 MtrunA17_Chr3g0118711 33.205 259 139 7 105 348 230 469 4.66e-37 139
Msa1177340 MtrunA17_Chr7g0243931 34.296 277 144 7 104 355 223 486 5.42e-37 139
Msa1177340 MtrunA17_Chr3g0118701 32.296 257 144 5 105 348 232 471 5.57e-37 139
Msa1177340 MtrunA17_Chr4g0014061 31.560 282 148 7 102 355 204 468 5.85e-37 139
Msa1177340 MtrunA17_Chr7g0249931 32.959 267 148 5 102 356 233 480 7.96e-37 139
Msa1177340 MtrunA17_Chr8g0367221 35.124 242 133 5 112 345 1505 1730 8.27e-37 142
Msa1177340 MtrunA17_Chr8g0367221 34.483 261 141 6 98 345 210 453 5.17e-36 139
Msa1177340 MtrunA17_Chr8g0367221 31.104 299 180 6 77 364 980 1263 5.22e-36 139
Msa1177340 MtrunA17_Chr5g0419771 33.213 277 151 6 102 355 243 508 2.29e-36 138
Msa1177340 MtrunA17_Chr7g0243711 34.701 268 139 8 108 355 61 312 3.73e-36 134
Msa1177340 MtrunA17_Chr7g0243951 34.182 275 146 7 104 355 217 479 3.94e-36 137
Msa1177340 MtrunA17_Chr7g0243851 34.643 280 139 9 104 355 175 438 4.83e-36 136
Msa1177340 MtrunA17_Chr7g0243861 31.926 379 208 13 8 355 124 483 7.87e-36 136
Msa1177340 MtrunA17_Chr8g0374971 32.852 277 156 9 102 355 207 476 9.88e-36 135
Msa1177340 MtrunA17_Chr4g0072761 26.536 358 236 6 2 355 114 448 1.47e-35 135
Msa1177340 MtrunA17_Chr1g0207831 31.061 264 149 4 105 355 216 459 2.65e-35 134
Msa1177340 MtrunA17_Chr6g0454351 28.647 377 212 11 6 358 124 467 2.94e-35 134
Msa1177340 MtrunA17_Chr1g0179901 31.884 276 147 8 100 348 221 482 5.32e-35 134
Msa1177340 MtrunA17_Chr7g0218311 32.852 277 154 8 102 355 212 479 5.53e-35 134
Msa1177340 MtrunA17_Chr2g0294941 34.211 266 144 11 102 344 107 364 6.20e-35 132
Msa1177340 MtrunA17_Chr8g0374941 32.857 280 156 10 100 355 1142 1413 8.81e-35 135
Msa1177340 MtrunA17_Chr8g0374941 32.463 268 151 10 100 344 204 464 9.30e-34 132
Msa1177340 MtrunA17_Chr8g0374941 33.962 265 145 9 100 341 669 926 3.66e-32 128
Msa1177340 MtrunA17_Chr7g0265111 32.867 286 140 7 100 352 242 508 9.86e-35 134
Msa1177340 MtrunA17_Chr7g0218831 25.915 355 231 9 4 352 104 432 1.14e-34 132
Msa1177340 MtrunA17_Chr8g0374901 33.692 279 155 10 100 355 203 474 1.89e-34 132
Msa1177340 MtrunA17_Chr1g0165701 30.809 383 201 14 9 355 125 479 2.12e-34 132
Msa1177340 MtrunA17_Chr7g0243761 31.195 343 174 11 8 314 121 437 2.62e-34 131
Msa1177340 MtrunA17_Chr4g0066281 33.091 275 150 10 104 355 199 462 2.94e-34 131
Msa1177340 MtrunA17_Chr8g0355011 29.521 376 185 12 6 358 46 364 3.08e-34 129
Msa1177340 MtrunA17_Chr5g0409591 33.333 243 141 4 104 326 212 453 5.03e-34 131
Msa1177340 MtrunA17_Chr2g0294931 32.246 276 158 7 102 355 209 477 6.36e-34 131
Msa1177340 MtrunA17_Chr6g0463891 26.823 384 223 10 6 355 121 480 7.37e-34 130
Msa1177340 MtrunA17_Chr3g0106251 30.952 294 167 7 66 348 14 282 8.31e-34 127
Msa1177340 MtrunA17_Chr3g0118661 27.717 368 224 10 5 348 119 468 1.01e-33 130
Msa1177340 MtrunA17_Chr2g0294921 31.818 286 166 9 102 365 358 636 1.51e-33 131
Msa1177340 MtrunA17_Chr5g0428081 31.884 276 159 8 102 355 207 475 2.11e-33 129
Msa1177340 MtrunA17_Chr7g0218841 27.838 370 204 14 5 352 105 433 2.78e-33 128
Msa1177340 MtrunA17_Chr8g0374931 33.086 269 151 10 102 348 209 470 3.14e-33 129
Msa1177340 MtrunA17_Chr6g0463851 26.904 394 223 15 9 362 120 488 3.21e-33 129
Msa1177340 MtrunA17_Chr3g0106231 28.689 366 211 12 6 352 110 444 4.02e-33 128
Msa1177340 MtrunA17_Chr8g0350881 31.541 279 161 8 100 355 205 476 1.37e-32 127
Msa1177340 MtrunA17_Chr4g0072771 25.926 351 233 6 2 348 127 454 8.55e-32 124
Msa1177340 MtrunA17_Chr4g0066171 28.391 317 196 10 61 355 165 472 1.08e-31 124
Msa1177340 MtrunA17_Chr4g0066201 26.790 377 228 12 4 355 117 470 1.78e-31 124
Msa1177340 MtrunA17_Chr7g0241781 35.238 210 112 5 128 334 216 404 2.16e-31 123
Msa1177340 MtrunA17_Chr7g0243911 36.585 205 105 6 152 344 24 215 4.03e-31 117
Msa1177340 MtrunA17_Chr7g0243611 36.325 234 118 8 100 317 74 292 5.14e-30 116
Msa1177340 MtrunA17_Chr5g0416741 26.178 382 239 11 9 364 124 488 8.81e-30 119
Msa1177340 MtrunA17_Chr8g0334841 38.854 157 89 3 66 216 1 156 9.53e-30 112
Msa1177340 MtrunA17_Chr7g0241801 34.951 206 110 4 128 330 216 400 1.12e-29 118
Msa1177340 MtrunA17_Chr5g0431431 31.502 273 147 8 66 329 116 357 2.39e-29 116
Msa1177340 MtrunA17_Chr5g0410941 33.180 217 127 5 150 355 276 485 2.71e-29 118
Msa1177340 MtrunA17_Chr3g0118751 29.097 299 149 6 66 348 182 433 3.31e-29 117
Msa1177340 MtrunA17_Chr4g0069611 33.333 231 130 5 112 334 222 436 4.11e-29 117
Msa1177340 MtrunA17_Chr6g0449971 66.250 80 27 0 283 362 1 80 2.62e-28 105
Msa1177340 MtrunA17_Chr6g0454251 29.553 291 169 8 6 274 119 395 2.91e-28 114
Msa1177340 MtrunA17_Chr4g0029151 35.185 216 127 5 112 325 226 430 7.78e-28 113
Msa1177340 MtrunA17_Chr5g0448551 27.711 332 197 10 9 319 110 419 7.82e-28 113
Msa1177340 MtrunA17_Chr2g0278721 31.227 269 152 6 78 340 717 958 9.80e-28 115
Msa1177340 MtrunA17_Chr2g0278721 28.228 333 208 7 21 340 133 447 1.27e-26 111
Msa1177340 MtrunA17_Chr4g0029131 33.632 223 135 5 105 325 211 422 2.06e-27 113
Msa1177340 MtrunA17_Chr4g0039881 33.613 238 132 6 112 340 199 419 6.96e-27 110
Msa1177340 MtrunA17_Chr6g0466841 31.646 237 138 5 112 340 225 445 1.06e-26 110
Msa1177340 MtrunA17_Chr7g0243811 35.323 201 107 6 104 296 190 375 1.18e-26 109
Msa1177340 MtrunA17_Chr6g0466831 30.802 237 140 5 112 340 225 445 1.27e-26 110
Msa1177340 MtrunA17_Chr3g0092031 33.152 184 106 3 152 334 6 173 1.65e-26 104
Msa1177340 MtrunA17_Chr2g0278741 30.932 236 141 3 112 340 309 529 4.92e-26 109
Msa1177340 MtrunA17_Chr1g0196851 33.632 223 135 6 105 325 251 462 9.69e-26 108
Msa1177340 MtrunA17_Chr6g0454371 34.031 191 104 6 172 358 1 173 3.07e-25 100
Msa1177340 MtrunA17_Chr8g0336261 33.548 155 85 4 172 326 1 137 3.12e-25 99.4
Msa1177340 MtrunA17_Chr4g0066141 40.000 155 71 4 218 355 198 347 6.25e-25 103
Msa1177340 MtrunA17_Chr2g0302851 32.035 231 133 5 112 334 223 437 1.81e-24 103
Msa1177340 MtrunA17_Chr3g0079721 31.250 176 110 3 6 170 113 288 2.86e-24 100
Msa1177340 MtrunA17_Chr8g0357361 30.396 227 126 7 104 318 63 269 3.64e-24 100
Msa1177340 MtrunA17_Chr6g0464091 32.159 227 128 6 112 330 232 440 7.56e-24 102
Msa1177340 MtrunA17_Chr2g0283041 32.287 223 135 5 104 324 211 419 1.35e-23 101
Msa1177340 MtrunA17_Chr7g0231631 27.798 277 155 8 99 355 4 255 4.19e-23 97.4
Msa1177340 MtrunA17_Chr5g0416821 31.455 213 117 5 150 355 279 469 4.20e-23 100
Msa1177340 MtrunA17_Chr6g0454231 28.125 256 123 8 102 349 5 207 7.69e-23 99.4
Msa1177340 MtrunA17_Chr4g0040711 30.093 216 134 3 112 324 220 421 8.20e-23 99.4
Msa1177340 MtrunA17_Chr2g0319751 36.500 200 111 5 127 324 713 898 1.53e-21 96.7
Msa1177340 MtrunA17_Chr2g0319751 29.461 241 125 6 127 360 236 438 1.42e-18 87.4
Msa1177340 MtrunA17_Chr4g0040691 30.435 184 116 2 152 335 261 432 5.11e-21 94.0
Msa1177340 MtrunA17_Chr5g0442501 31.250 208 137 3 6 208 109 315 8.82e-21 91.7
Msa1177340 MtrunA17_Chr2g0319791 35.000 200 114 5 127 324 236 421 3.28e-20 91.7
Msa1177340 MtrunA17_Chr2g0319761 34.762 210 114 7 152 354 259 452 6.45e-20 90.9
Msa1177340 MtrunA17_Chr6g0469961 32.934 167 98 4 36 192 2 164 1.26e-19 85.1
Msa1177340 MtrunA17_Chr1g0207881 38.053 113 68 1 238 348 261 373 2.80e-19 88.6
Msa1177340 MtrunA17_Chr5g0442551 30.800 250 139 10 6 244 69 295 4.89e-18 83.6
Msa1177340 MtrunA17_Chr7g0243731 45.205 73 40 0 231 303 6 78 3.72e-16 72.8
Msa1177340 MtrunA17_Chr6g0453981 30.964 197 114 5 22 196 8 204 6.63e-16 76.3
Msa1177340 MtrunA17_Chr2g0319801 31.606 193 116 5 152 342 259 437 1.79e-15 77.4
Msa1177340 MtrunA17_Chr2g0319731 30.052 193 119 5 152 342 276 454 2.60e-15 77.0
Msa1177340 MtrunA17_Chr2g0321331 30.178 169 88 4 157 324 91 230 4.24e-15 74.7
Msa1177340 MtrunA17_Chr4g0029161 28.700 223 118 7 105 325 211 394 2.89e-14 73.6
Msa1177340 MtrunA17_Chr6g0453941 30.244 205 120 6 15 196 53 257 1.12e-12 67.8
Msa1177340 MtrunA17_Chr6g0454391 37.879 66 37 2 250 315 13 74 5.99e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1177340 AT4G01070.1 58.496 359 144 3 7 361 112 469 1.71e-153 441
Msa1177340 AT1G01420.1 53.279 366 156 6 5 361 109 468 1.23e-133 390
Msa1177340 AT1G01420.2 53.279 366 156 6 5 361 112 471 1.58e-133 390
Msa1177340 AT1G01390.1 51.955 358 167 3 7 360 112 468 5.75e-124 366
Msa1177340 AT1G01390.2 51.955 358 167 3 7 360 129 485 8.04e-124 366
Msa1177340 AT5G26310.1 39.726 365 199 6 7 356 106 464 2.98e-91 282
Msa1177340 AT5G66690.1 41.360 353 188 5 7 346 106 452 2.83e-90 280
Msa1177340 AT3G50740.1 40.056 357 195 6 4 346 108 459 5.42e-90 279
Msa1177340 AT2G18570.1 40.270 370 198 7 1 356 103 463 7.02e-90 278
Msa1177340 AT2G18560.1 38.843 363 200 6 7 356 20 373 1.40e-86 267
Msa1177340 AT3G16520.3 38.440 359 204 6 6 359 113 459 6.02e-84 263
Msa1177340 AT4G01070.2 53.361 238 104 4 7 240 112 346 1.15e-81 253
Msa1177340 AT3G16520.2 38.551 345 195 6 6 345 113 445 1.37e-80 253
Msa1177340 AT3G16520.1 38.109 349 199 6 6 349 113 449 1.69e-80 253
Msa1177340 AT4G36770.1 42.817 355 173 12 5 342 105 446 1.46e-78 248
Msa1177340 AT1G07250.1 40.884 362 182 13 3 349 118 462 3.47e-72 233
Msa1177340 AT1G07260.1 37.741 363 190 12 3 348 117 460 4.73e-69 224
Msa1177340 AT2G29740.1 37.047 359 196 11 3 348 122 463 1.51e-64 213
Msa1177340 AT2G29750.1 36.212 359 198 13 3 348 122 462 4.28e-64 212
Msa1177340 AT3G21790.1 37.705 366 199 12 3 348 111 467 1.99e-62 207
Msa1177340 AT3G21800.1 35.890 365 208 9 3 348 107 464 4.02e-62 206
Msa1177340 AT1G07240.1 34.426 366 207 11 5 353 120 469 9.09e-61 203
Msa1177340 AT3G21750.1 34.595 370 207 8 2 348 100 457 1.32e-60 202
Msa1177340 AT2G29730.1 33.611 360 208 11 5 352 115 455 2.11e-59 199
Msa1177340 AT3G21760.1 35.440 364 206 10 5 348 115 469 8.01e-59 198
Msa1177340 AT4G15280.1 34.933 375 194 13 3 348 109 462 9.24e-59 197
Msa1177340 AT4G15280.2 34.933 375 194 13 3 348 141 494 1.42e-58 198
Msa1177340 AT3G21780.1 36.631 374 201 12 5 358 105 462 7.94e-58 195
Msa1177340 AT4G15260.1 33.702 362 195 11 13 348 1 343 6.39e-57 189
Msa1177340 AT2G29710.1 33.148 359 210 11 6 352 115 455 2.55e-56 191
Msa1177340 AT1G22340.1 32.791 369 206 11 6 349 120 471 7.57e-52 179
Msa1177340 AT2G15490.3 31.694 366 203 11 7 348 124 466 1.73e-50 176
Msa1177340 AT2G15480.1 31.967 366 202 11 7 348 127 469 3.15e-50 175
Msa1177340 AT2G15490.1 31.694 366 206 11 7 348 124 469 4.40e-50 175
Msa1177340 AT1G22380.1 35.083 362 193 12 6 343 120 463 1.07e-49 174
Msa1177340 AT1G22360.1 31.978 369 209 10 6 350 117 467 1.57e-49 173
Msa1177340 AT2G15480.2 31.746 378 197 12 7 348 127 479 2.22e-49 173
Msa1177340 AT1G22400.1 32.973 370 204 12 6 349 120 471 4.47e-49 172
Msa1177340 AT2G31750.1 34.365 323 176 7 53 358 150 453 5.26e-49 171
Msa1177340 AT2G31750.2 34.365 323 176 7 53 358 150 453 1.00e-48 171
Msa1177340 AT4G34131.1 30.601 366 218 9 1 348 121 468 3.45e-48 170
Msa1177340 AT1G78270.1 32.033 359 204 9 6 341 120 461 5.12e-48 169
Msa1177340 AT2G36970.1 35.616 292 162 9 66 348 185 459 5.42e-47 167
Msa1177340 AT2G16890.2 29.268 369 225 7 5 358 118 465 6.53e-46 164
Msa1177340 AT1G10400.1 33.787 367 205 12 1 352 112 455 8.73e-46 163
Msa1177340 AT4G34138.1 35.769 260 137 6 104 348 223 467 1.39e-45 163
Msa1177340 AT5G14860.1 31.781 365 218 10 5 355 124 471 2.64e-45 162
Msa1177340 AT2G43820.1 30.000 370 201 11 6 352 105 439 5.59e-45 160
Msa1177340 AT3G53160.1 38.182 275 134 8 104 355 217 478 9.56e-45 160
Msa1177340 AT2G30140.2 31.844 358 214 6 7 356 112 447 5.98e-44 158
Msa1177340 AT2G36800.1 33.333 333 167 10 44 352 179 480 7.79e-44 158
Msa1177340 AT3G46670.1 33.051 354 208 10 4 348 104 437 1.28e-43 157
Msa1177340 AT2G30140.1 31.755 359 214 6 7 356 112 448 2.15e-43 156
Msa1177340 AT2G43840.2 29.067 375 218 10 2 358 101 445 3.94e-43 155
Msa1177340 AT4G34135.1 31.436 369 212 10 1 348 122 470 4.21e-43 156
Msa1177340 AT2G36770.1 32.776 299 166 8 80 355 198 484 7.49e-43 155
Msa1177340 AT2G43840.1 29.067 375 218 10 2 358 101 445 7.78e-43 155
Msa1177340 AT3G46700.1 32.033 359 217 11 6 356 102 441 1.28e-42 154
Msa1177340 AT1G22360.2 30.081 369 204 10 6 350 117 455 1.50e-42 154
Msa1177340 AT2G36750.1 33.110 299 154 8 75 352 203 476 1.93e-42 154
Msa1177340 AT5G03490.1 30.811 370 211 13 8 362 126 465 2.34e-42 154
Msa1177340 AT2G36780.1 35.401 274 143 7 104 355 223 484 3.01e-42 154
Msa1177340 AT2G30150.1 31.436 369 196 10 7 352 95 429 3.12e-42 153
Msa1177340 AT5G59580.1 33.138 341 196 12 19 348 117 436 4.09e-42 153
Msa1177340 AT5G05870.1 37.786 262 142 6 100 356 206 451 4.36e-42 153
Msa1177340 AT2G30150.2 31.436 369 196 10 7 352 111 445 5.13e-42 152
Msa1177340 AT2G31790.1 31.250 368 212 8 8 355 106 452 5.38e-42 152
Msa1177340 AT5G38040.1 35.959 292 163 8 66 352 170 442 1.30e-41 151
Msa1177340 AT1G73880.1 30.742 283 166 5 83 349 188 456 4.36e-41 150
Msa1177340 AT5G59590.1 30.618 356 217 11 6 352 108 442 8.20e-41 149
Msa1177340 AT5G05880.1 30.194 361 222 9 4 355 105 444 1.19e-40 149
Msa1177340 AT1G22370.2 31.933 357 206 10 6 343 120 458 1.33e-40 149
Msa1177340 AT3G46660.1 32.295 353 215 9 3 348 109 444 2.04e-40 148
Msa1177340 AT2G23260.1 30.864 324 191 8 44 352 141 446 2.35e-40 148
Msa1177340 AT1G05675.1 35.094 265 140 4 105 356 204 449 2.42e-40 148
Msa1177340 AT1G05680.1 36.226 265 137 6 105 356 204 449 3.54e-40 147
Msa1177340 AT5G05860.1 37.868 272 144 8 92 356 191 444 1.01e-39 146
Msa1177340 AT4G15480.1 31.367 373 225 12 6 363 127 483 1.72e-39 146
Msa1177340 AT5G12890.1 34.241 257 148 8 104 349 225 471 3.44e-39 145
Msa1177340 AT2G16890.3 29.878 328 194 9 5 317 118 424 4.39e-39 144
Msa1177340 AT3G46690.1 36.466 266 149 6 94 355 196 445 4.56e-39 144
Msa1177340 AT2G23250.1 29.532 342 212 9 21 352 106 428 6.24e-39 144
Msa1177340 AT1G22370.1 34.471 293 159 8 66 343 14 288 7.81e-39 140
Msa1177340 AT3G11340.1 35.409 257 146 7 100 352 197 437 1.51e-38 143
Msa1177340 AT2G36760.1 33.948 271 145 8 104 352 223 481 2.99e-38 143
Msa1177340 AT3G21560.1 28.997 369 225 11 1 352 117 465 4.71e-38 142
Msa1177340 AT3G46680.1 32.938 337 194 12 22 348 124 438 6.71e-38 141
Msa1177340 AT1G51210.1 34.454 238 127 6 104 334 217 432 6.77e-38 141
Msa1177340 AT2G36790.1 34.909 275 145 8 100 352 218 480 9.91e-38 142
Msa1177340 AT5G38010.1 36.508 252 137 7 102 348 209 442 3.23e-37 139
Msa1177340 AT3G46650.1 35.135 259 149 6 92 347 178 420 4.59e-37 139
Msa1177340 AT3G53150.1 34.164 281 142 9 102 349 229 499 6.14e-37 140
Msa1177340 AT4G15550.1 30.878 353 221 11 6 348 123 462 6.63e-37 139
Msa1177340 AT5G05890.1 29.526 359 227 8 4 355 109 448 7.34e-37 139
Msa1177340 AT2G26480.1 30.688 378 196 14 10 356 100 442 8.43e-37 138
Msa1177340 AT1G06000.1 34.717 265 148 9 104 355 177 429 1.17e-36 138
Msa1177340 AT1G05560.1 29.972 357 221 10 6 352 107 444 4.26e-35 134
Msa1177340 AT1G24100.1 39.234 209 106 5 149 355 265 454 4.26e-35 134
Msa1177340 AT3G55700.1 31.975 319 178 12 45 355 159 446 4.96e-35 134
Msa1177340 AT1G05560.2 35.039 254 150 6 105 352 250 494 6.26e-35 134
Msa1177340 AT2G28080.1 29.268 328 198 12 36 350 155 461 8.66e-35 133
Msa1177340 AT3G46720.1 34.746 236 121 5 127 356 229 437 1.49e-34 132
Msa1177340 AT4G14090.1 29.412 340 204 13 21 348 129 444 2.94e-34 132
Msa1177340 AT4G15500.1 27.989 368 232 11 6 358 112 461 3.76e-34 132
Msa1177340 AT5G05900.1 29.805 359 221 10 4 355 109 443 4.31e-34 131
Msa1177340 AT4G15490.1 28.261 368 212 12 6 348 115 455 7.73e-34 130
Msa1177340 AT5G17050.1 27.809 356 221 10 6 350 117 447 1.14e-33 130
Msa1177340 AT5G49690.1 34.034 238 132 5 112 345 224 440 1.25e-32 127
Msa1177340 AT1G30530.1 27.507 349 227 7 5 348 112 439 4.83e-32 125
Msa1177340 AT3G55710.1 30.943 265 159 6 100 356 203 451 5.57e-32 125
Msa1177340 AT1G05530.1 31.045 335 185 11 32 352 145 447 5.86e-32 125
Msa1177340 AT5G65550.1 33.992 253 141 7 99 347 214 444 7.03e-32 125
Msa1177340 AT5G17030.1 27.143 350 215 9 16 348 118 444 6.91e-30 119
Msa1177340 AT5G17040.1 25.926 351 228 8 4 348 104 428 1.38e-29 118
Msa1177340 AT3G02100.1 26.685 371 208 10 6 352 122 452 9.83e-29 116
Msa1177340 AT5G17040.2 29.084 251 153 5 102 348 97 326 1.71e-27 111
Msa1177340 AT2G22590.1 29.098 244 159 4 105 345 224 456 3.05e-26 109
Msa1177340 AT5G37950.2 29.710 276 171 9 4 274 81 338 4.91e-26 107
Msa1177340 AT5G54010.1 33.178 214 129 4 112 324 210 410 1.03e-25 107
Msa1177340 AT5G37950.1 35.955 178 95 6 102 274 181 344 2.44e-25 105
Msa1177340 AT5G54060.1 30.147 272 173 6 84 352 198 455 2.26e-23 101
Msa1177340 AT5G53990.1 25.641 312 197 7 20 324 121 404 4.50e-23 100
Msa1177340 AT1G64910.1 28.452 239 144 6 89 319 180 399 8.64e-23 99.4
Msa1177340 AT3G22250.1 24.932 365 215 14 6 338 103 440 2.30e-22 98.2
Msa1177340 AT4G27570.1 32.759 174 105 2 151 324 249 410 2.59e-22 98.2
Msa1177340 AT1G64920.1 27.076 277 171 8 89 352 180 438 3.02e-21 95.1
Msa1177340 AT4G27560.1 31.609 174 107 2 151 324 249 410 4.40e-21 94.7
Msa1177340 AT1G50580.1 30.000 210 133 4 112 319 203 400 3.50e-20 92.0
Msa1177340 AT2G22930.1 27.039 233 155 5 89 319 180 399 8.13e-20 90.9
Msa1177340 AT3G29630.1 28.571 231 148 6 112 337 204 422 1.70e-19 89.7
Msa1177340 AT3G29630.2 30.688 189 116 4 152 337 220 396 3.80e-19 88.6
Msa1177340 AT4G09500.2 30.000 160 100 2 160 319 252 399 2.63e-17 83.2
Msa1177340 AT4G09500.1 30.000 160 100 2 160 319 227 374 2.90e-17 83.2
Msa1177340 AT4G34135.2 27.570 214 134 8 1 199 122 329 7.55e-12 66.2

Find 98 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGACCAAAAGTTGGTGAAAA+TGG 0.177751 8_1:-9712097 Msa1177340:CDS
CAAACAGATGAAATTGCTTA+TGG 0.199225 8_1:-9712460 Msa1177340:CDS
GCTCTCGTTGTCGACCTATT+TGG 0.234600 8_1:-9712964 Msa1177340:CDS
CCAGGGATGTTAAGCGGTTC+AGG 0.252657 8_1:+9712805 None:intergenic
AATGAAATGCAACTTCAATT+TGG 0.252889 8_1:+9711893 None:intergenic
GGGTTTGGTGCTCCCATATT+GGG 0.263420 8_1:-9712293 Msa1177340:CDS
TGTGCTTGTGGGGCCCAATA+TGG 0.273884 8_1:+9712280 None:intergenic
GTCGAGTTGGGGAAAATAAA+AGG 0.278544 8_1:+9712858 None:intergenic
TAAACTCGCCCTGAACATTT+TGG 0.285664 8_1:+9712836 None:intergenic
AAAGGTTCTTGTGGGTTCTA+AGG 0.307960 8_1:-9712420 Msa1177340:CDS
AAAATGTTCAGGGCGAGTTT+AGG 0.308903 8_1:-9712834 Msa1177340:CDS
AAATGTTCAGGGCGAGTTTA+GGG 0.316326 8_1:-9712833 Msa1177340:CDS
AGGGTTTGGTGCTCCCATAT+TGG 0.322327 8_1:-9712294 Msa1177340:CDS
CCTGGATGTTTCGCGGTTCA+TGG 0.328235 8_1:-9712787 Msa1177340:CDS
AAAGGCAAAGGACAAGTTAT+TGG 0.355934 8_1:+9712876 None:intergenic
CCAACTCGACCAAAATGTTC+AGG 0.364634 8_1:-9712845 Msa1177340:CDS
AACAAAGCGAATATGTGAAT+TGG 0.382350 8_1:-9711942 Msa1177340:CDS
AACGGTCCAACCGGATAAAC+CGG 0.383526 8_1:+9712607 None:intergenic
GTAGGGAAGTAGAGATATGA+AGG 0.393522 8_1:+9712904 None:intergenic
CAAACCCTCCAATTGAGATA+TGG 0.401066 8_1:+9712248 None:intergenic
AAACAGATGAAATTGCTTAT+GGG 0.403797 8_1:-9712459 Msa1177340:CDS
GGCTCAAAACTTGTGCTTGT+GGG 0.405742 8_1:+9712269 None:intergenic
AAGTGTTGTGAAGAGGTTAA+TGG 0.406621 8_1:-9712050 Msa1177340:CDS
CATCTGTTTGAGCACTAGTA+AGG 0.409084 8_1:+9712473 None:intergenic
GAATGAACCACCGGTTTATC+CGG 0.413273 8_1:-9712617 Msa1177340:CDS
TCGTTGTTTCGATCATGAAT+CGG 0.414724 8_1:+9712748 None:intergenic
AGTGTTATATTTGTGAATTT+TGG 0.416579 8_1:-9712508 Msa1177340:CDS
GACCAAAAGTTGGTGAAAAT+GGG 0.421220 8_1:-9712096 Msa1177340:CDS
AGTAATGCTCTAAAGGAAAA+CGG 0.424259 8_1:-9711971 Msa1177340:CDS
GTCCTCTCTATATAACCATT+TGG 0.425286 8_1:+9712325 None:intergenic
CAAAGGCATCGGTGCCAAAT+AGG 0.435365 8_1:+9712950 None:intergenic
GTGAAAATGGGTTGGTTCAA+AGG 0.435915 8_1:-9712084 Msa1177340:CDS
CGTTGTTTCGATCATGAATC+GGG 0.436640 8_1:+9712749 None:intergenic
GTAATGCTCTAAAGGAAAAC+GGG 0.445068 8_1:-9711970 Msa1177340:CDS
GTGCTTGTGGGGCCCAATAT+GGG 0.452728 8_1:+9712281 None:intergenic
TGCAGCTAGTAATGCTCTAA+AGG 0.458717 8_1:-9711978 Msa1177340:CDS
TATGTGAATTGGCTCTCAAA+TGG 0.460975 8_1:-9711931 Msa1177340:CDS
CCATGAACCGCGAAACATCC+AGG 0.462567 8_1:+9712787 None:intergenic
ATGGTGGAGAAAACACTTGT+AGG 0.469986 8_1:+9712723 None:intergenic
TCATTCACTAACGGTCCAAC+CGG 0.470646 8_1:+9712598 None:intergenic
GAGGACTGAAGGGAAGGGTT+TGG 0.472212 8_1:-9712308 Msa1177340:CDS
GAGTGAACAAAGGTTCTTGT+GGG 0.481319 8_1:-9712428 Msa1177340:CDS
GTTAATGGTAGGAGAAGAAG+AGG 0.489578 8_1:-9712035 Msa1177340:CDS
TATAGAGAGGACTGAAGGGA+AGG 0.495702 8_1:-9712314 Msa1177340:CDS
CTGGATGTTTCGCGGTTCAT+GGG 0.496839 8_1:-9712786 Msa1177340:CDS
TGAAAATGGGTTGGTTCAAA+GGG 0.499576 8_1:-9712083 Msa1177340:CDS
AGATGAAATTGCTTATGGGT+TGG 0.499668 8_1:-9712455 Msa1177340:CDS
GGTTTGTGAGTCATTGTGGT+TGG 0.500489 8_1:-9712231 Msa1177340:CDS
GGAGGGTTTGTGAGTCATTG+TGG 0.507302 8_1:-9712235 Msa1177340:CDS
CCTGAACCGCTTAACATCCC+TGG 0.512247 8_1:-9712805 Msa1177340:CDS
AAAGATTCGTTATAGAATGA+AGG 0.516245 8_1:-9712011 Msa1177340:CDS
AATGAAGACTCTATTAGTAA+TGG 0.517386 8_1:-9712580 Msa1177340:CDS
TACCAAATGGTTATATAGAG+AGG 0.518074 8_1:-9712327 Msa1177340:CDS
ACAAGATACAAGTTGGCTAA+AGG 0.520920 8_1:-9712697 Msa1177340:CDS
CAGGGATGTTAAGCGGTTCA+GGG 0.521709 8_1:+9712806 None:intergenic
GAACCACCGGTTTATCCGGT+TGG 0.530877 8_1:-9712613 Msa1177340:CDS
AGCGGCCATGTCAAAGGCAT+CGG 0.531956 8_1:+9712939 None:intergenic
TTGAGCCATATCTCAATTGG+AGG 0.532313 8_1:-9712253 Msa1177340:CDS
ATGGTGTGCCTTTGATTGCA+TGG 0.534549 8_1:-9712183 Msa1177340:CDS
TGGCTCAAAACTTGTGCTTG+TGG 0.539656 8_1:+9712268 None:intergenic
CAACTCGACCAAAATGTTCA+GGG 0.546449 8_1:-9712844 Msa1177340:CDS
GGTTATATAGAGAGGACTGA+AGG 0.546944 8_1:-9712319 Msa1177340:CDS
TGGCACCGATGCCTTTGACA+TGG 0.551374 8_1:-9712944 Msa1177340:CDS
TAACATCCCTGGATGTTTCG+CGG 0.554616 8_1:-9712794 Msa1177340:CDS
TAGTTCAGCGGCCATGTCAA+AGG 0.556477 8_1:+9712933 None:intergenic
AAAGGACAAGTTATTGGCAG+TGG 0.556666 8_1:+9712882 None:intergenic
TTTGCAAAAGAATGAACCAC+CGG 0.567033 8_1:-9712626 Msa1177340:CDS
GCTCAAAACTTGTGCTTGTG+GGG 0.569089 8_1:+9712270 None:intergenic
ACAAGTTATTGGCAGTGGTA+GGG 0.574724 8_1:+9712887 None:intergenic
AAATTGCAAGTGTTGTGAAG+AGG 0.574727 8_1:-9712057 Msa1177340:CDS
AAAAGTTGGTGAAAATGGGT+TGG 0.576084 8_1:-9712092 Msa1177340:CDS
TGAGTGAACAAAGGTTCTTG+TGG 0.577096 8_1:-9712429 Msa1177340:CDS
CCATGTGACAAGATACAAGT+TGG 0.578373 8_1:-9712704 Msa1177340:CDS
GTTATATAGAGAGGACTGAA+GGG 0.581664 8_1:-9712318 Msa1177340:CDS
ATAGAGAGGACTGAAGGGAA+GGG 0.583004 8_1:-9712313 Msa1177340:CDS
TAGAGTGGCCATGCAATCAA+AGG 0.583957 8_1:+9712175 None:intergenic
GTTGTGAAGAGGTTAATGGT+AGG 0.584786 8_1:-9712046 Msa1177340:CDS
CCAACTTGTATCTTGTCACA+TGG 0.585986 8_1:+9712704 None:intergenic
GTGGCTATTAGACCAAAAGT+TGG 0.591467 8_1:-9712106 Msa1177340:CDS
ACTCTTGAGAGTGTGGTGAA+TGG 0.594847 8_1:-9712202 Msa1177340:CDS
AACGAGAGCAGAGAGACGGT+GGG 0.595055 8_1:+9712978 None:intergenic
CAACGAGAGCAGAGAGACGG+TGG 0.597678 8_1:+9712977 None:intergenic
GACAAGTTATTGGCAGTGGT+AGG 0.603578 8_1:+9712886 None:intergenic
TGAGCCATATCTCAATTGGA+GGG 0.608515 8_1:-9712252 Msa1177340:CDS
TGGTTGGATGAGCAGCCACA+TGG 0.610908 8_1:-9712532 Msa1177340:CDS
TTGGGGAAAATAAAAGGCAA+AGG 0.618995 8_1:+9712864 None:intergenic
CATGAACCGCGAAACATCCA+GGG 0.625416 8_1:+9712788 None:intergenic
GAATTCAACTCTTGAGAGTG+TGG 0.636353 8_1:-9712209 Msa1177340:CDS
ATAGAGTCTTCATTCACTAA+CGG 0.636886 8_1:+9712589 None:intergenic
TAGGGAAGTAGAGATATGAA+GGG 0.640711 8_1:+9712905 None:intergenic
CGACAACGAGAGCAGAGAGA+CGG 0.644699 8_1:+9712974 None:intergenic
GGTTGGAAATGAGTGAACAA+AGG 0.662246 8_1:-9712438 Msa1177340:CDS
ACTTGTATCTTGTCACATGG+TGG 0.665922 8_1:+9712707 None:intergenic
AAACATCCAGGGATGTTAAG+CGG 0.681929 8_1:+9712799 None:intergenic
GAATTGGCTCTCAAATGGAA+AGG 0.691832 8_1:-9711926 Msa1177340:CDS
TGAAGGGATATCTAGTTCAG+CGG 0.695711 8_1:+9712921 None:intergenic
GGTCCAACCGGATAAACCGG+TGG 0.727499 8_1:+9712610 None:intergenic
ACAAATATAACACTTCCATG+TGG 0.743736 8_1:+9712517 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTGTTATATTTGTGAATTT+TGG - chr8_1:9712384-9712403 Msa1177340:CDS 20.0%
!! CATTTGGTAAAAATTCAAAA+GGG + chr8_1:9712554-9712573 None:intergenic 20.0%
!!! AGTGTTATATTTGTGAATTT+TGG - chr8_1:9712384-9712403 Msa1177340:CDS 20.0%
!! CATTTGGTAAAAATTCAAAA+GGG + chr8_1:9712554-9712573 None:intergenic 20.0%
! AATGAAGACTCTATTAGTAA+TGG - chr8_1:9712312-9712331 Msa1177340:CDS 25.0%
!! AATTTGATGTGTGTTTTCAA+TGG - chr8_1:9712340-9712359 Msa1177340:CDS 25.0%
! AAACAGATGAAATTGCTTAT+GGG - chr8_1:9712433-9712452 Msa1177340:CDS 25.0%
!! TCATTTTCAACTTTATCCTT+AGG + chr8_1:9712501-9712520 None:intergenic 25.0%
! CCATTTGGTAAAAATTCAAA+AGG + chr8_1:9712555-9712574 None:intergenic 25.0%
!! CCTTTTGAATTTTTACCAAA+TGG - chr8_1:9712552-9712571 Msa1177340:CDS 25.0%
! ATTGAGTGAAAAAGTTAAAG+TGG - chr8_1:9712767-9712786 Msa1177340:CDS 25.0%
! AAAGATTCGTTATAGAATGA+AGG - chr8_1:9712881-9712900 Msa1177340:CDS 25.0%
! AATGAAGACTCTATTAGTAA+TGG - chr8_1:9712312-9712331 Msa1177340:CDS 25.0%
!! AATTTGATGTGTGTTTTCAA+TGG - chr8_1:9712340-9712359 Msa1177340:CDS 25.0%
! AAACAGATGAAATTGCTTAT+GGG - chr8_1:9712433-9712452 Msa1177340:CDS 25.0%
!! TCATTTTCAACTTTATCCTT+AGG + chr8_1:9712501-9712520 None:intergenic 25.0%
! CCATTTGGTAAAAATTCAAA+AGG + chr8_1:9712555-9712574 None:intergenic 25.0%
!! CCTTTTGAATTTTTACCAAA+TGG - chr8_1:9712552-9712571 Msa1177340:CDS 25.0%
! ATTGAGTGAAAAAGTTAAAG+TGG - chr8_1:9712767-9712786 Msa1177340:CDS 25.0%
! AAAGATTCGTTATAGAATGA+AGG - chr8_1:9712881-9712900 Msa1177340:CDS 25.0%
!!! TAGTTTTTTTGAGCTTGAAC+CGG - chr8_1:9712230-9712249 Msa1177340:CDS 30.0%
ATAGAGTCTTCATTCACTAA+CGG + chr8_1:9712306-9712325 None:intergenic 30.0%
ACAAATATAACACTTCCATG+TGG + chr8_1:9712378-9712397 None:intergenic 30.0%
!!! ATTTGTGAATTTTGGTAGTG+AGG - chr8_1:9712392-9712411 Msa1177340:CDS 30.0%
!!! TTTGTGAATTTTGGTAGTGA+GGG - chr8_1:9712393-9712412 Msa1177340:CDS 30.0%
CAAACAGATGAAATTGCTTA+TGG - chr8_1:9712432-9712451 Msa1177340:CDS 30.0%
TACCAAATGGTTATATAGAG+AGG - chr8_1:9712565-9712584 Msa1177340:CDS 30.0%
!! AGTAATGCTCTAAAGGAAAA+CGG - chr8_1:9712921-9712940 Msa1177340:CDS 30.0%
AACAAAGCGAATATGTGAAT+TGG - chr8_1:9712950-9712969 Msa1177340:CDS 30.0%
!!! TAGTTTTTTTGAGCTTGAAC+CGG - chr8_1:9712230-9712249 Msa1177340:CDS 30.0%
ATAGAGTCTTCATTCACTAA+CGG + chr8_1:9712306-9712325 None:intergenic 30.0%
ACAAATATAACACTTCCATG+TGG + chr8_1:9712378-9712397 None:intergenic 30.0%
!!! ATTTGTGAATTTTGGTAGTG+AGG - chr8_1:9712392-9712411 Msa1177340:CDS 30.0%
!!! TTTGTGAATTTTGGTAGTGA+GGG - chr8_1:9712393-9712412 Msa1177340:CDS 30.0%
CAAACAGATGAAATTGCTTA+TGG - chr8_1:9712432-9712451 Msa1177340:CDS 30.0%
TACCAAATGGTTATATAGAG+AGG - chr8_1:9712565-9712584 Msa1177340:CDS 30.0%
!! AGTAATGCTCTAAAGGAAAA+CGG - chr8_1:9712921-9712940 Msa1177340:CDS 30.0%
AACAAAGCGAATATGTGAAT+TGG - chr8_1:9712950-9712969 Msa1177340:CDS 30.0%
TAGGGAAGTAGAGATATGAA+GGG + chr8_1:9711990-9712009 None:intergenic 35.0%
AAAGGCAAAGGACAAGTTAT+TGG + chr8_1:9712019-9712038 None:intergenic 35.0%
TTGGGGAAAATAAAAGGCAA+AGG + chr8_1:9712031-9712050 None:intergenic 35.0%
! TCGTTGTTTCGATCATGAAT+CGG + chr8_1:9712147-9712166 None:intergenic 35.0%
! ACAAGATACAAGTTGGCTAA+AGG - chr8_1:9712195-9712214 Msa1177340:CDS 35.0%
TGCAAAAAAGTAATAGCCTC+CGG + chr8_1:9712252-9712271 None:intergenic 35.0%
TTTGCAAAAGAATGAACCAC+CGG - chr8_1:9712266-9712285 Msa1177340:CDS 35.0%
! TGATGTGTGTTTTCAATGGT+TGG - chr8_1:9712344-9712363 Msa1177340:CDS 35.0%
!!! TTGTGAATTTTGGTAGTGAG+GGG - chr8_1:9712394-9712413 Msa1177340:CDS 35.0%
AGATGAAATTGCTTATGGGT+TGG - chr8_1:9712437-9712456 Msa1177340:CDS 35.0%
GTCCTCTCTATATAACCATT+TGG + chr8_1:9712570-9712589 None:intergenic 35.0%
GTTATATAGAGAGGACTGAA+GGG - chr8_1:9712574-9712593 Msa1177340:CDS 35.0%
!! GTTTTGAGCCATATCTCAAT+TGG - chr8_1:9712636-9712655 Msa1177340:CDS 35.0%
! ATCTTTTGTTCAGCATAGAG+TGG + chr8_1:9712735-9712754 None:intergenic 35.0%
!! AGACCAAAAGTTGGTGAAAA+TGG - chr8_1:9712795-9712814 Msa1177340:CDS 35.0%
!! GACCAAAAGTTGGTGAAAAT+GGG - chr8_1:9712796-9712815 Msa1177340:CDS 35.0%
! AACCCATTTTCACCAACTTT+TGG + chr8_1:9712801-9712820 None:intergenic 35.0%
!! AAAAGTTGGTGAAAATGGGT+TGG - chr8_1:9712800-9712819 Msa1177340:CDS 35.0%
!! TGAAAATGGGTTGGTTCAAA+GGG - chr8_1:9712809-9712828 Msa1177340:CDS 35.0%
! AAATTGCAAGTGTTGTGAAG+AGG - chr8_1:9712835-9712854 Msa1177340:CDS 35.0%
! AAGTGTTGTGAAGAGGTTAA+TGG - chr8_1:9712842-9712861 Msa1177340:CDS 35.0%
!! GTAATGCTCTAAAGGAAAAC+GGG - chr8_1:9712922-9712941 Msa1177340:CDS 35.0%
! TATGTGAATTGGCTCTCAAA+TGG - chr8_1:9712961-9712980 Msa1177340:CDS 35.0%
TAGGGAAGTAGAGATATGAA+GGG + chr8_1:9711990-9712009 None:intergenic 35.0%
AAAGGCAAAGGACAAGTTAT+TGG + chr8_1:9712019-9712038 None:intergenic 35.0%
TTGGGGAAAATAAAAGGCAA+AGG + chr8_1:9712031-9712050 None:intergenic 35.0%
! TCGTTGTTTCGATCATGAAT+CGG + chr8_1:9712147-9712166 None:intergenic 35.0%
! ACAAGATACAAGTTGGCTAA+AGG - chr8_1:9712195-9712214 Msa1177340:CDS 35.0%
TGCAAAAAAGTAATAGCCTC+CGG + chr8_1:9712252-9712271 None:intergenic 35.0%
TTTGCAAAAGAATGAACCAC+CGG - chr8_1:9712266-9712285 Msa1177340:CDS 35.0%
! TGATGTGTGTTTTCAATGGT+TGG - chr8_1:9712344-9712363 Msa1177340:CDS 35.0%
!!! TTGTGAATTTTGGTAGTGAG+GGG - chr8_1:9712394-9712413 Msa1177340:CDS 35.0%
AGATGAAATTGCTTATGGGT+TGG - chr8_1:9712437-9712456 Msa1177340:CDS 35.0%
GTCCTCTCTATATAACCATT+TGG + chr8_1:9712570-9712589 None:intergenic 35.0%
GTTATATAGAGAGGACTGAA+GGG - chr8_1:9712574-9712593 Msa1177340:CDS 35.0%
!! GTTTTGAGCCATATCTCAAT+TGG - chr8_1:9712636-9712655 Msa1177340:CDS 35.0%
! ATCTTTTGTTCAGCATAGAG+TGG + chr8_1:9712735-9712754 None:intergenic 35.0%
!! AGACCAAAAGTTGGTGAAAA+TGG - chr8_1:9712795-9712814 Msa1177340:CDS 35.0%
!! GACCAAAAGTTGGTGAAAAT+GGG - chr8_1:9712796-9712815 Msa1177340:CDS 35.0%
! AACCCATTTTCACCAACTTT+TGG + chr8_1:9712801-9712820 None:intergenic 35.0%
!! AAAAGTTGGTGAAAATGGGT+TGG - chr8_1:9712800-9712819 Msa1177340:CDS 35.0%
!! TGAAAATGGGTTGGTTCAAA+GGG - chr8_1:9712809-9712828 Msa1177340:CDS 35.0%
! AAATTGCAAGTGTTGTGAAG+AGG - chr8_1:9712835-9712854 Msa1177340:CDS 35.0%
! AAGTGTTGTGAAGAGGTTAA+TGG - chr8_1:9712842-9712861 Msa1177340:CDS 35.0%
!! GTAATGCTCTAAAGGAAAAC+GGG - chr8_1:9712922-9712941 Msa1177340:CDS 35.0%
! TATGTGAATTGGCTCTCAAA+TGG - chr8_1:9712961-9712980 Msa1177340:CDS 35.0%
! TGAAGGGATATCTAGTTCAG+CGG + chr8_1:9711974-9711993 None:intergenic 40.0%
GTAGGGAAGTAGAGATATGA+AGG + chr8_1:9711991-9712010 None:intergenic 40.0%
ACAAGTTATTGGCAGTGGTA+GGG + chr8_1:9712008-9712027 None:intergenic 40.0%
AAAGGACAAGTTATTGGCAG+TGG + chr8_1:9712013-9712032 None:intergenic 40.0%
!! GTCGAGTTGGGGAAAATAAA+AGG + chr8_1:9712037-9712056 None:intergenic 40.0%
!! TGAACATTTTGGTCGAGTTG+GGG + chr8_1:9712048-9712067 None:intergenic 40.0%
!! CTGAACATTTTGGTCGAGTT+GGG + chr8_1:9712049-9712068 None:intergenic 40.0%
CAACTCGACCAAAATGTTCA+GGG - chr8_1:9712048-9712067 Msa1177340:CDS 40.0%
! TAAACTCGCCCTGAACATTT+TGG + chr8_1:9712059-9712078 None:intergenic 40.0%
AAAATGTTCAGGGCGAGTTT+AGG - chr8_1:9712058-9712077 Msa1177340:CDS 40.0%
AAATGTTCAGGGCGAGTTTA+GGG - chr8_1:9712059-9712078 Msa1177340:CDS 40.0%
AAACATCCAGGGATGTTAAG+CGG + chr8_1:9712096-9712115 None:intergenic 40.0%
! CGTTGTTTCGATCATGAATC+GGG + chr8_1:9712146-9712165 None:intergenic 40.0%
! ATGGTGGAGAAAACACTTGT+AGG + chr8_1:9712172-9712191 None:intergenic 40.0%
ACTTGTATCTTGTCACATGG+TGG + chr8_1:9712188-9712207 None:intergenic 40.0%
CCAACTTGTATCTTGTCACA+TGG + chr8_1:9712191-9712210 None:intergenic 40.0%
CCATGTGACAAGATACAAGT+TGG - chr8_1:9712188-9712207 Msa1177340:CDS 40.0%
!!! TTTTTTTGAGCTTGAACCGG+AGG - chr8_1:9712233-9712252 Msa1177340:CDS 40.0%
CATCTGTTTGAGCACTAGTA+AGG + chr8_1:9712422-9712441 None:intergenic 40.0%
GGTTGGAAATGAGTGAACAA+AGG - chr8_1:9712454-9712473 Msa1177340:CDS 40.0%
TGAGTGAACAAAGGTTCTTG+TGG - chr8_1:9712463-9712482 Msa1177340:CDS 40.0%
GAGTGAACAAAGGTTCTTGT+GGG - chr8_1:9712464-9712483 Msa1177340:CDS 40.0%
AAAGGTTCTTGTGGGTTCTA+AGG - chr8_1:9712472-9712491 Msa1177340:CDS 40.0%
GGTTATATAGAGAGGACTGA+AGG - chr8_1:9712573-9712592 Msa1177340:CDS 40.0%
TTGAGCCATATCTCAATTGG+AGG - chr8_1:9712639-9712658 Msa1177340:CDS 40.0%
TGAGCCATATCTCAATTGGA+GGG - chr8_1:9712640-9712659 Msa1177340:CDS 40.0%
CAAACCCTCCAATTGAGATA+TGG + chr8_1:9712647-9712666 None:intergenic 40.0%
GAATTCAACTCTTGAGAGTG+TGG - chr8_1:9712683-9712702 Msa1177340:CDS 40.0%
GTGGCTATTAGACCAAAAGT+TGG - chr8_1:9712786-9712805 Msa1177340:CDS 40.0%
!! GTGAAAATGGGTTGGTTCAA+AGG - chr8_1:9712808-9712827 Msa1177340:CDS 40.0%
GTTGTGAAGAGGTTAATGGT+AGG - chr8_1:9712846-9712865 Msa1177340:CDS 40.0%
GTTAATGGTAGGAGAAGAAG+AGG - chr8_1:9712857-9712876 Msa1177340:CDS 40.0%
TGCAGCTAGTAATGCTCTAA+AGG - chr8_1:9712914-9712933 Msa1177340:CDS 40.0%
! GAATTGGCTCTCAAATGGAA+AGG - chr8_1:9712966-9712985 Msa1177340:CDS 40.0%
! TGAAGGGATATCTAGTTCAG+CGG + chr8_1:9711974-9711993 None:intergenic 40.0%
GTAGGGAAGTAGAGATATGA+AGG + chr8_1:9711991-9712010 None:intergenic 40.0%
ACAAGTTATTGGCAGTGGTA+GGG + chr8_1:9712008-9712027 None:intergenic 40.0%
AAAGGACAAGTTATTGGCAG+TGG + chr8_1:9712013-9712032 None:intergenic 40.0%
!! GTCGAGTTGGGGAAAATAAA+AGG + chr8_1:9712037-9712056 None:intergenic 40.0%
!! TGAACATTTTGGTCGAGTTG+GGG + chr8_1:9712048-9712067 None:intergenic 40.0%
!! CTGAACATTTTGGTCGAGTT+GGG + chr8_1:9712049-9712068 None:intergenic 40.0%
CAACTCGACCAAAATGTTCA+GGG - chr8_1:9712048-9712067 Msa1177340:CDS 40.0%
! TAAACTCGCCCTGAACATTT+TGG + chr8_1:9712059-9712078 None:intergenic 40.0%
AAAATGTTCAGGGCGAGTTT+AGG - chr8_1:9712058-9712077 Msa1177340:CDS 40.0%
AAATGTTCAGGGCGAGTTTA+GGG - chr8_1:9712059-9712078 Msa1177340:CDS 40.0%
AAACATCCAGGGATGTTAAG+CGG + chr8_1:9712096-9712115 None:intergenic 40.0%
! CGTTGTTTCGATCATGAATC+GGG + chr8_1:9712146-9712165 None:intergenic 40.0%
! ATGGTGGAGAAAACACTTGT+AGG + chr8_1:9712172-9712191 None:intergenic 40.0%
ACTTGTATCTTGTCACATGG+TGG + chr8_1:9712188-9712207 None:intergenic 40.0%
CCAACTTGTATCTTGTCACA+TGG + chr8_1:9712191-9712210 None:intergenic 40.0%
CCATGTGACAAGATACAAGT+TGG - chr8_1:9712188-9712207 Msa1177340:CDS 40.0%
!!! TTTTTTTGAGCTTGAACCGG+AGG - chr8_1:9712233-9712252 Msa1177340:CDS 40.0%
CATCTGTTTGAGCACTAGTA+AGG + chr8_1:9712422-9712441 None:intergenic 40.0%
GGTTGGAAATGAGTGAACAA+AGG - chr8_1:9712454-9712473 Msa1177340:CDS 40.0%
TGAGTGAACAAAGGTTCTTG+TGG - chr8_1:9712463-9712482 Msa1177340:CDS 40.0%
GAGTGAACAAAGGTTCTTGT+GGG - chr8_1:9712464-9712483 Msa1177340:CDS 40.0%
AAAGGTTCTTGTGGGTTCTA+AGG - chr8_1:9712472-9712491 Msa1177340:CDS 40.0%
GGTTATATAGAGAGGACTGA+AGG - chr8_1:9712573-9712592 Msa1177340:CDS 40.0%
TTGAGCCATATCTCAATTGG+AGG - chr8_1:9712639-9712658 Msa1177340:CDS 40.0%
TGAGCCATATCTCAATTGGA+GGG - chr8_1:9712640-9712659 Msa1177340:CDS 40.0%
CAAACCCTCCAATTGAGATA+TGG + chr8_1:9712647-9712666 None:intergenic 40.0%
GAATTCAACTCTTGAGAGTG+TGG - chr8_1:9712683-9712702 Msa1177340:CDS 40.0%
GTGGCTATTAGACCAAAAGT+TGG - chr8_1:9712786-9712805 Msa1177340:CDS 40.0%
!! GTGAAAATGGGTTGGTTCAA+AGG - chr8_1:9712808-9712827 Msa1177340:CDS 40.0%
GTTGTGAAGAGGTTAATGGT+AGG - chr8_1:9712846-9712865 Msa1177340:CDS 40.0%
GTTAATGGTAGGAGAAGAAG+AGG - chr8_1:9712857-9712876 Msa1177340:CDS 40.0%
TGCAGCTAGTAATGCTCTAA+AGG - chr8_1:9712914-9712933 Msa1177340:CDS 40.0%
! GAATTGGCTCTCAAATGGAA+AGG - chr8_1:9712966-9712985 Msa1177340:CDS 40.0%
GACAAGTTATTGGCAGTGGT+AGG + chr8_1:9712009-9712028 None:intergenic 45.0%
!! CCTGAACATTTTGGTCGAGT+TGG + chr8_1:9712050-9712069 None:intergenic 45.0%
CCAACTCGACCAAAATGTTC+AGG - chr8_1:9712047-9712066 Msa1177340:CDS 45.0%
TAACATCCCTGGATGTTTCG+CGG - chr8_1:9712098-9712117 Msa1177340:CDS 45.0%
!! GAATGAACCACCGGTTTATC+CGG - chr8_1:9712275-9712294 Msa1177340:CDS 45.0%
TCATTCACTAACGGTCCAAC+CGG + chr8_1:9712297-9712316 None:intergenic 45.0%
TATAGAGAGGACTGAAGGGA+AGG - chr8_1:9712578-9712597 Msa1177340:CDS 45.0%
ATAGAGAGGACTGAAGGGAA+GGG - chr8_1:9712579-9712598 Msa1177340:CDS 45.0%
GCTCAAAACTTGTGCTTGTG+GGG + chr8_1:9712625-9712644 None:intergenic 45.0%
GGCTCAAAACTTGTGCTTGT+GGG + chr8_1:9712626-9712645 None:intergenic 45.0%
TGGCTCAAAACTTGTGCTTG+TGG + chr8_1:9712627-9712646 None:intergenic 45.0%
GGTTTGTGAGTCATTGTGGT+TGG - chr8_1:9712661-9712680 Msa1177340:CDS 45.0%
! ACTCTTGAGAGTGTGGTGAA+TGG - chr8_1:9712690-9712709 Msa1177340:CDS 45.0%
ATGGTGTGCCTTTGATTGCA+TGG - chr8_1:9712709-9712728 Msa1177340:CDS 45.0%
TAGAGTGGCCATGCAATCAA+AGG + chr8_1:9712720-9712739 None:intergenic 45.0%
GACAAGTTATTGGCAGTGGT+AGG + chr8_1:9712009-9712028 None:intergenic 45.0%
!! CCTGAACATTTTGGTCGAGT+TGG + chr8_1:9712050-9712069 None:intergenic 45.0%
CCAACTCGACCAAAATGTTC+AGG - chr8_1:9712047-9712066 Msa1177340:CDS 45.0%
TAACATCCCTGGATGTTTCG+CGG - chr8_1:9712098-9712117 Msa1177340:CDS 45.0%
!! GAATGAACCACCGGTTTATC+CGG - chr8_1:9712275-9712294 Msa1177340:CDS 45.0%
TCATTCACTAACGGTCCAAC+CGG + chr8_1:9712297-9712316 None:intergenic 45.0%
TATAGAGAGGACTGAAGGGA+AGG - chr8_1:9712578-9712597 Msa1177340:CDS 45.0%
ATAGAGAGGACTGAAGGGAA+GGG - chr8_1:9712579-9712598 Msa1177340:CDS 45.0%
GCTCAAAACTTGTGCTTGTG+GGG + chr8_1:9712625-9712644 None:intergenic 45.0%
GGCTCAAAACTTGTGCTTGT+GGG + chr8_1:9712626-9712645 None:intergenic 45.0%
TGGCTCAAAACTTGTGCTTG+TGG + chr8_1:9712627-9712646 None:intergenic 45.0%
GGTTTGTGAGTCATTGTGGT+TGG - chr8_1:9712661-9712680 Msa1177340:CDS 45.0%
! ACTCTTGAGAGTGTGGTGAA+TGG - chr8_1:9712690-9712709 Msa1177340:CDS 45.0%
ATGGTGTGCCTTTGATTGCA+TGG - chr8_1:9712709-9712728 Msa1177340:CDS 45.0%
TAGAGTGGCCATGCAATCAA+AGG + chr8_1:9712720-9712739 None:intergenic 45.0%
GCTCTCGTTGTCGACCTATT+TGG - chr8_1:9711928-9711947 Msa1177340:CDS 50.0%
!! CAAAGGCATCGGTGCCAAAT+AGG + chr8_1:9711945-9711964 None:intergenic 50.0%
TAGTTCAGCGGCCATGTCAA+AGG + chr8_1:9711962-9711981 None:intergenic 50.0%
CAGGGATGTTAAGCGGTTCA+GGG + chr8_1:9712089-9712108 None:intergenic 50.0%
CATGAACCGCGAAACATCCA+GGG + chr8_1:9712107-9712126 None:intergenic 50.0%
CTGGATGTTTCGCGGTTCAT+GGG - chr8_1:9712106-9712125 Msa1177340:CDS 50.0%
AACGGTCCAACCGGATAAAC+CGG + chr8_1:9712288-9712307 None:intergenic 50.0%
!! GTGGGTTCTAAGGTGTCCTA+AGG - chr8_1:9712482-9712501 Msa1177340:CDS 50.0%
!! AGGGTTTGGTGCTCCCATAT+TGG - chr8_1:9712598-9712617 Msa1177340:CDS 50.0%
!! GGGTTTGGTGCTCCCATATT+GGG - chr8_1:9712599-9712618 Msa1177340:CDS 50.0%
GGAGGGTTTGTGAGTCATTG+TGG - chr8_1:9712657-9712676 Msa1177340:CDS 50.0%
GCTCTCGTTGTCGACCTATT+TGG - chr8_1:9711928-9711947 Msa1177340:CDS 50.0%
!! CAAAGGCATCGGTGCCAAAT+AGG + chr8_1:9711945-9711964 None:intergenic 50.0%
TAGTTCAGCGGCCATGTCAA+AGG + chr8_1:9711962-9711981 None:intergenic 50.0%
CAGGGATGTTAAGCGGTTCA+GGG + chr8_1:9712089-9712108 None:intergenic 50.0%
CATGAACCGCGAAACATCCA+GGG + chr8_1:9712107-9712126 None:intergenic 50.0%
CTGGATGTTTCGCGGTTCAT+GGG - chr8_1:9712106-9712125 Msa1177340:CDS 50.0%
AACGGTCCAACCGGATAAAC+CGG + chr8_1:9712288-9712307 None:intergenic 50.0%
!! GTGGGTTCTAAGGTGTCCTA+AGG - chr8_1:9712482-9712501 Msa1177340:CDS 50.0%
!! AGGGTTTGGTGCTCCCATAT+TGG - chr8_1:9712598-9712617 Msa1177340:CDS 50.0%
!! GGGTTTGGTGCTCCCATATT+GGG - chr8_1:9712599-9712618 Msa1177340:CDS 50.0%
GGAGGGTTTGTGAGTCATTG+TGG - chr8_1:9712657-9712676 Msa1177340:CDS 50.0%
AACGAGAGCAGAGAGACGGT+GGG + chr8_1:9711917-9711936 None:intergenic 55.0%
CGACAACGAGAGCAGAGAGA+CGG + chr8_1:9711921-9711940 None:intergenic 55.0%
!! TGGCACCGATGCCTTTGACA+TGG - chr8_1:9711948-9711967 Msa1177340:CDS 55.0%
! AGCGGCCATGTCAAAGGCAT+CGG + chr8_1:9711956-9711975 None:intergenic 55.0%
CCAGGGATGTTAAGCGGTTC+AGG + chr8_1:9712090-9712109 None:intergenic 55.0%
CCTGAACCGCTTAACATCCC+TGG - chr8_1:9712087-9712106 Msa1177340:CDS 55.0%
CCATGAACCGCGAAACATCC+AGG + chr8_1:9712108-9712127 None:intergenic 55.0%
CCTGGATGTTTCGCGGTTCA+TGG - chr8_1:9712105-9712124 Msa1177340:CDS 55.0%
!! GAACCACCGGTTTATCCGGT+TGG - chr8_1:9712279-9712298 Msa1177340:CDS 55.0%
TGGTTGGATGAGCAGCCACA+TGG - chr8_1:9712360-9712379 Msa1177340:CDS 55.0%
GAGGACTGAAGGGAAGGGTT+TGG - chr8_1:9712584-9712603 Msa1177340:CDS 55.0%
GTGCTTGTGGGGCCCAATAT+GGG + chr8_1:9712614-9712633 None:intergenic 55.0%
TGTGCTTGTGGGGCCCAATA+TGG + chr8_1:9712615-9712634 None:intergenic 55.0%
AACGAGAGCAGAGAGACGGT+GGG + chr8_1:9711917-9711936 None:intergenic 55.0%
CGACAACGAGAGCAGAGAGA+CGG + chr8_1:9711921-9711940 None:intergenic 55.0%
!! TGGCACCGATGCCTTTGACA+TGG - chr8_1:9711948-9711967 Msa1177340:CDS 55.0%
! AGCGGCCATGTCAAAGGCAT+CGG + chr8_1:9711956-9711975 None:intergenic 55.0%
CCAGGGATGTTAAGCGGTTC+AGG + chr8_1:9712090-9712109 None:intergenic 55.0%
CCTGAACCGCTTAACATCCC+TGG - chr8_1:9712087-9712106 Msa1177340:CDS 55.0%
CCATGAACCGCGAAACATCC+AGG + chr8_1:9712108-9712127 None:intergenic 55.0%
CCTGGATGTTTCGCGGTTCA+TGG - chr8_1:9712105-9712124 Msa1177340:CDS 55.0%
!! GAACCACCGGTTTATCCGGT+TGG - chr8_1:9712279-9712298 Msa1177340:CDS 55.0%
TGGTTGGATGAGCAGCCACA+TGG - chr8_1:9712360-9712379 Msa1177340:CDS 55.0%
GAGGACTGAAGGGAAGGGTT+TGG - chr8_1:9712584-9712603 Msa1177340:CDS 55.0%
GTGCTTGTGGGGCCCAATAT+GGG + chr8_1:9712614-9712633 None:intergenic 55.0%
TGTGCTTGTGGGGCCCAATA+TGG + chr8_1:9712615-9712634 None:intergenic 55.0%
CAACGAGAGCAGAGAGACGG+TGG + chr8_1:9711918-9711937 None:intergenic 60.0%
GGTCCAACCGGATAAACCGG+TGG + chr8_1:9712285-9712304 None:intergenic 60.0%
CAACGAGAGCAGAGAGACGG+TGG + chr8_1:9711918-9711937 None:intergenic 60.0%
GGTCCAACCGGATAAACCGG+TGG + chr8_1:9712285-9712304 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 9711907 9713007 9711907 ID=Msa1177340;Name=Msa1177340
chr8_1 mRNA 9711907 9713007 9711907 ID=Msa1177340-mRNA-1;Parent=Msa1177340;Name=Msa1177340-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|366
chr8_1 exon 9711907 9713007 9711907 ID=Msa1177340-mRNA-1:exon:3368;Parent=Msa1177340-mRNA-1
chr8_1 CDS 9711907 9713007 9711907 ID=Msa1177340-mRNA-1:cds;Parent=Msa1177340-mRNA-1
Gene Sequence

>Msa1177340

ATGACTTCCCACCGTCTCTCTGCTCTCGTTGTCGACCTATTTGGCACCGATGCCTTTGACATGGCCGCTGAACTAGATATCCCTTCATATCTCTACTTCCCTACCACTGCCAATAACTTGTCCTTTGCCTTTTATTTTCCCCAACTCGACCAAAATGTTCAGGGCGAGTTTAGGGATATCCCTGAACCGCTTAACATCCCTGGATGTTTCGCGGTTCATGGGAAAGACTTAGCAGACCCGATTCATGATCGAAACAACGAAGCCTACAAGTGTTTTCTCCACCATGTGACAAGATACAAGTTGGCTAAAGGAATAATAGAGAATAGTTTTTTTGAGCTTGAACCGGAGGCTATTACTTTTTTGCAAAAGAATGAACCACCGGTTTATCCGGTTGGACCGTTAGTGAATGAAGACTCTATTAGTAATGGATCAGAATTTGATGTGTGTTTTCAATGGTTGGATGAGCAGCCACATGGAAGTGTTATATTTGTGAATTTTGGTAGTGAGGGGATCCTTACTAGTGCTCAAACAGATGAAATTGCTTATGGGTTGGAAATGAGTGAACAAAGGTTCTTGTGGGTTCTAAGGTGTCCTAAGGATAAAGTTGAAAATGATTCTAATTTTATTGCAAATAGTAATGTTGACCCTTTTGAATTTTTACCAAATGGTTATATAGAGAGGACTGAAGGGAAGGGTTTGGTGCTCCCATATTGGGCCCCACAAGCACAAGTTTTGAGCCATATCTCAATTGGAGGGTTTGTGAGTCATTGTGGTTGGAATTCAACTCTTGAGAGTGTGGTGAATGGTGTGCCTTTGATTGCATGGCCACTCTATGCTGAACAAAAGATGAATGCTGTTTTATTGAGTGAAAAAGTTAAAGTGGCTATTAGACCAAAAGTTGGTGAAAATGGGTTGGTTCAAAGGGAAGAAATTGCAAGTGTTGTGAAGAGGTTAATGGTAGGAGAAGAAGAGGAAAAGATTCGTTATAGAATGAAGGATCTCAAAGATGCAGCTAGTAATGCTCTAAAGGAAAACGGGTCTTCAACAAAGCGAATATGTGAATTGGCTCTCAAATGGAAAGGTGTTACAATACCAAATTGA
Protein sequence

>Msa1177340

MTSHRLSALVVDLFGTDAFDMAAELDIPSYLYFPTTANNLSFAFYFPQLDQNVQGEFRDIPEPLNIPGCFAVHGKDLADPIHDRNNEAYKCFLHHVTRYKLAKGIIENSFFELEPEAITFLQKNEPPVYPVGPLVNEDSISNGSEFDVCFQWLDEQPHGSVIFVNFGSEGILTSAQTDEIAYGLEMSEQRFLWVLRCPKDKVENDSNFIANSNVDPFEFLPNGYIERTEGKGLVLPYWAPQAQVLSHISIGGFVSHCGWNSTLESVVNGVPLIAWPLYAEQKMNAVLLSEKVKVAIRPKVGENGLVQREEIASVVKRLMVGEEEEKIRYRMKDLKDAASNALKENGSSTKRICELALKWKGVTIPN*