AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0288270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288270 MtrunA17_Chr4g0073231 66.393 610 129 5 9 542 24 633 0.0 813
Msa0288270 MtrunA17_Chr2g0305451 98.222 225 4 0 318 542 2 226 1.44e-164 466
Msa0288270 MtrunA17_Chr2g0305431 72.797 261 30 3 11 230 26 286 1.99e-124 367
Msa0288270 MtrunA17_Chr8g0337101 31.763 573 301 10 44 534 89 653 1.64e-87 283
Msa0288270 MtrunA17_Chr8g0337081 28.523 589 331 13 21 533 41 615 1.60e-71 240
Msa0288270 MtrunA17_Chr7g0256391 28.405 602 337 11 11 535 29 613 7.47e-69 233
Msa0288270 MtrunA17_Chr7g0256371 30.182 550 296 10 61 535 84 620 7.91e-69 233
Msa0288270 MtrunA17_Chr7g0256411 28.873 568 321 9 39 533 84 641 9.36e-68 230
Msa0288270 MtrunA17_Chr4g0026761 29.144 549 306 10 58 533 73 611 4.14e-64 220
Msa0288270 MtrunA17_Chr2g0305441 72.951 122 1 1 229 318 37 158 8.11e-51 172
Msa0288270 MtrunA17_Chr4g0026811 29.250 400 209 5 60 386 60 458 8.06e-47 170
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288270 AT5G57800.1 57.990 607 174 8 9 535 24 629 0.0 682
Msa0288270 AT1G02205.4 31.973 588 317 12 21 533 42 621 4.88e-89 286
Msa0288270 AT1G02205.2 31.973 588 317 12 21 533 41 620 7.92e-89 286
Msa0288270 AT1G02205.3 31.588 592 319 12 21 533 41 625 1.20e-87 283
Msa0288270 AT2G37700.4 32.392 531 305 11 46 533 59 578 2.72e-79 260
Msa0288270 AT2G37700.3 31.760 551 293 12 59 533 72 615 1.08e-75 251
Msa0288270 AT2G37700.1 31.579 551 285 12 59 533 72 606 1.11e-74 248
Msa0288270 AT1G02205.5 36.053 380 204 7 188 533 7 381 5.81e-74 240
Msa0288270 AT1G02190.1 29.538 606 322 13 15 533 35 622 2.39e-73 245
Msa0288270 AT1G02205.1 36.053 380 204 7 188 533 82 456 1.07e-72 239
Msa0288270 AT1G02190.2 29.402 602 324 14 15 533 35 618 1.22e-71 241
Msa0288270 AT2G37700.2 31.343 402 201 9 59 386 72 472 5.03e-49 177

Find 153 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCCCTAGGTGTGGCTTTC+AGG 0.088000 2_3:-32914852 Msa0288270:intron
CAAGGGGAGTCTTATATTTA+AGG 0.162989 2_3:+32911131 None:intergenic
TCTCAGAACCACTTTATTAT+TGG 0.179518 2_3:-32917915 Msa0288270:CDS
CTGTTTCTGTCGTTAGTAAT+TGG 0.197549 2_3:-32917510 Msa0288270:CDS
TCACTCCAAGAGAGCAAAAT+TGG 0.214120 2_3:-32912316 Msa0288270:CDS
AATTATTTAAGTTGAATTAA+AGG 0.215717 2_3:-32911337 Msa0288270:three_prime_UTR
CTCATATTGTCTAGTCTTAG+AGG 0.232997 2_3:-32918466 Msa0288270:CDS
TCAAACAATATTGGCTTCTA+TGG 0.241065 2_3:-32918022 Msa0288270:CDS
AAAACCCCGACTCAAATATT+TGG 0.243261 2_3:-32911373 Msa0288270:three_prime_UTR
CTTCCATTATGGAACATTAA+AGG 0.248081 2_3:-32917970 Msa0288270:CDS
TCCTACAAAATCTTCCATTA+TGG 0.249445 2_3:-32917981 Msa0288270:CDS
TTTAGAAGAGATTGCACTTA+TGG 0.262243 2_3:-32912242 Msa0288270:CDS
AAAACTTCTTTGGCATCTTT+AGG 0.262452 2_3:+32913042 None:intergenic
TTTAATTCTTCAAACAATAT+TGG 0.266427 2_3:-32918031 Msa0288270:CDS
CTCAGAACCACTTTATTATT+GGG 0.270378 2_3:-32917914 Msa0288270:CDS
CAGCTTGGCTGCTTTGAATA+AGG 0.272905 2_3:-32914566 Msa0288270:intron
ATGCAGAATGAATCTCTAAA+TGG 0.279050 2_3:-32913159 Msa0288270:intron
CATGAACAACTCGAACTCTT+AGG 0.279627 2_3:+32913103 None:intergenic
AGCGGGAACCGGTACGGTTT+TGG 0.292315 2_3:-32917538 Msa0288270:CDS
AGGATGTGATATCCACTATA+TGG 0.314664 2_3:+32915050 None:intergenic
CCCGGTAAGGAAAACTTCTT+TGG 0.317209 2_3:+32913032 None:intergenic
ATTCTCACCGCTGATAAAAT+TGG 0.319998 2_3:-32914601 Msa0288270:CDS
AAGATAACTTTGGTATTCTT+CGG 0.331311 2_3:+32912400 None:intergenic
GGAGCTTCATTGATGGGATA+TGG 0.335334 2_3:-32917474 Msa0288270:CDS
ACTTATAATAACCTATATAT+AGG 0.337177 2_3:+32918806 None:intergenic
ACACCTTTAATGTTCCATAA+TGG 0.349310 2_3:+32917967 None:intergenic
ATTATTTAAGTTGAATTAAA+GGG 0.359068 2_3:-32911336 Msa0288270:three_prime_UTR
CTAAGAGTTCGAGTTGTTCA+TGG 0.362503 2_3:-32913102 Msa0288270:CDS
GGTCTAAGACCTTTGTCTTC+GGG 0.363383 2_3:-32911417 Msa0288270:CDS
AGATAACTTTGGTATTCTTC+GGG 0.364479 2_3:+32912401 None:intergenic
TTTAACTGCAGCTGTGATCT+TGG 0.367863 2_3:-32913073 Msa0288270:CDS
CATGGCCATGGGAGAACTTT+GGG 0.369137 2_3:-32918700 Msa0288270:CDS
TGGGTGCATAAGAAGTTTCA+TGG 0.372705 2_3:-32917895 Msa0288270:CDS
AAACCGTCAGATTCTTAAAC+AGG 0.375776 2_3:-32918392 Msa0288270:CDS
GTCTAGCCAGTCCTTTGAAA+TGG 0.376085 2_3:-32918738 Msa0288270:five_prime_UTR
CCCGTTACTGACTGTGGTAC+TGG 0.377406 2_3:+32917829 None:intergenic
CCAAAAGAAAGTCAAAATTC+TGG 0.380050 2_3:-32912968 Msa0288270:intron
AGGGTTTCTAATCAGTTTGT+AGG 0.384212 2_3:-32911317 Msa0288270:three_prime_UTR
TCAAGCAGCTTGACAAAGAA+TGG 0.391574 2_3:-32918360 Msa0288270:CDS
TGGTCTAAGACCTTTGTCTT+CGG 0.393012 2_3:-32911418 Msa0288270:CDS
AAATTGGAGGAACAACAAAT+TGG 0.393279 2_3:+32912270 None:intergenic
GGGTTTCTAATCAGTTTGTA+GGG 0.396861 2_3:-32911316 Msa0288270:three_prime_UTR
ACAACTCGAACTCTTAGGTT+TGG 0.396990 2_3:+32913108 None:intergenic
GAGGCTTGCTTTATTTGCTA+TGG 0.402905 2_3:-32918447 Msa0288270:CDS
TTTGTGTAATTCCCATGATT+TGG 0.405516 2_3:+32917111 None:intergenic
CAACTCGAACTCTTAGGTTT+GGG 0.405560 2_3:+32913109 None:intergenic
CGAATGCAGGAAATTGTAGT+AGG 0.411595 2_3:-32915096 Msa0288270:intron
TAAATGTTCACATCCATTGT+TGG 0.419737 2_3:-32911245 Msa0288270:three_prime_UTR
CCAAGGCCTTCCACATCATC+TGG 0.420649 2_3:+32912197 None:intergenic
TGCAGAATGAATCTCTAAAT+GGG 0.425144 2_3:-32913158 Msa0288270:intron
TTACACAAATCATTCAGTTC+AGG 0.431698 2_3:-32917097 Msa0288270:intron
TGTCACCAAATATTTGAGTC+GGG 0.439897 2_3:+32911368 None:intergenic
AGCATTATTAGCCTATATAT+AGG 0.440460 2_3:-32918817 Msa0288270:five_prime_UTR
TCATGGCCATGGGAGAACTT+TGG 0.442180 2_3:-32918701 Msa0288270:CDS
ATGGTGAAGTGAATGGTATT+TGG 0.447963 2_3:+32917858 None:intergenic
TGGGCCAGGAAAACAAATTC+CGG 0.457449 2_3:+32915070 None:intergenic
CAATTACTAACGACAGAAAC+AGG 0.460695 2_3:+32917511 None:intergenic
TCCCATGGCCATGATGATAA+AGG 0.465804 2_3:+32918710 None:intergenic
CCAGATGATGTGGAAGGCCT+TGG 0.468693 2_3:-32912197 Msa0288270:CDS
GAAGGCACCAGCTGAATTTG+AGG 0.469377 2_3:+32918494 None:intergenic
CATTGCAAGACATGGATTGT+TGG 0.469406 2_3:-32912347 Msa0288270:CDS
CACTCCAAGAGAGCAAAATT+GGG 0.470494 2_3:-32912315 Msa0288270:CDS
TGACTTGAACAAGATAACTT+TGG 0.472839 2_3:+32912390 None:intergenic
TCTTGCAATGCTGTGCTGCT+TGG 0.479530 2_3:+32912360 None:intergenic
TCATCACATAATTAAATTTG+AGG 0.480714 2_3:-32918854 Msa0288270:five_prime_UTR
CATCACATAATTAAATTTGA+GGG 0.481250 2_3:-32918853 Msa0288270:five_prime_UTR
CCAGTACCACAGTCAGTAAC+GGG 0.482696 2_3:-32917829 Msa0288270:CDS
TCTAGCCAGTCCTTTGAAAT+GGG 0.483587 2_3:-32918737 Msa0288270:five_prime_UTR
GGAGAACTTTGGGATATTCA+AGG 0.485944 2_3:-32918690 Msa0288270:intron
GATCCTAGGAGCTTCATTGA+TGG 0.486137 2_3:-32917481 Msa0288270:CDS
CTTCTCTACCATTCAGAACA+AGG 0.486214 2_3:-32914994 Msa0288270:intron
TAGATTTCAGAAGATTCAAA+AGG 0.494537 2_3:-32912429 Msa0288270:CDS
GTAATTGGAATTCCGATCCT+AGG 0.495287 2_3:-32917495 Msa0288270:CDS
TTATGCACCCAATAATAAAG+TGG 0.504285 2_3:+32917907 None:intergenic
CGTCAAAGAGAGGCATGAAA+AGG 0.504893 2_3:+32917155 None:intergenic
CACTCTACACCACACTGAAA+AGG 0.505016 2_3:-32917191 Msa0288270:CDS
ACCGGGGCTACTTCTAAGCT+TGG 0.505549 2_3:-32913015 Msa0288270:CDS
GGTTGGACTCATCACGAAGT+TGG 0.506539 2_3:-32911492 Msa0288270:CDS
ATACGCTTGACACCAAATCA+TGG 0.507365 2_3:-32917123 Msa0288270:CDS
GTGGTTCACGCATGCCATGC+AGG 0.511151 2_3:-32911537 Msa0288270:CDS
CAAGCAGCTTGACAAAGAAT+GGG 0.512027 2_3:-32918359 Msa0288270:CDS
GGATGTGATATCCACTATAT+GGG 0.514968 2_3:+32915051 None:intergenic
GGAGTTGTACACAGTCTTGA+GGG 0.515468 2_3:-32911513 Msa0288270:CDS
AAGAAGAACCTTGTTCTGAA+TGG 0.526189 2_3:+32914986 None:intergenic
TTGATCCCCTCAGTAGCAAA+TGG 0.528384 2_3:+32914643 None:intergenic
ATCAAACATGGGTTGTCCCT+AGG 0.531029 2_3:-32914865 Msa0288270:CDS
ATGCCTCTCTTTGACGCACT+AGG 0.531967 2_3:-32917148 Msa0288270:CDS
ATGCAGTACACAATGGATAG+AGG 0.532071 2_3:-32911561 Msa0288270:intron
TGATATCCACTATATGGGCC+AGG 0.532609 2_3:+32915056 None:intergenic
TTGGAGGAACAACAAATTGG+TGG 0.540504 2_3:+32912273 None:intergenic
GTTTGCAGCGGGAACCGGTA+CGG 0.540915 2_3:-32917544 Msa0288270:intron
CTCCTTTATCATCATGGCCA+TGG 0.541676 2_3:-32918712 Msa0288270:exon
CAGCACAGCATTGCAAGACA+TGG 0.541786 2_3:-32912355 Msa0288270:CDS
TGGGAGCTCCTTTATCATCA+TGG 0.543070 2_3:-32918718 Msa0288270:exon
TTGGAGCTATTGATGTTGAA+AGG 0.549242 2_3:-32911473 Msa0288270:CDS
AGGAAATTGTAGTAGGGTAC+CGG 0.549906 2_3:-32915089 Msa0288270:CDS
GCTTAGAAGTAGCCCCGGTA+AGG 0.550708 2_3:+32913019 None:intergenic
TCCTTTATCATCATGGCCAT+GGG 0.554011 2_3:-32918711 Msa0288270:exon
AGAAAGACCTCAAATTCAGC+TGG 0.554395 2_3:-32918501 Msa0288270:CDS
GAGCTCCCATTTCAAAGGAC+TGG 0.555213 2_3:+32918732 None:intergenic
TACGCTTGACACCAAATCAT+GGG 0.556289 2_3:-32917122 Msa0288270:CDS
AGCTTGACAAAGAATGGGAC+TGG 0.557542 2_3:-32918354 Msa0288270:intron
ATCCTAGGAGCTTCATTGAT+GGG 0.558457 2_3:-32917480 Msa0288270:CDS
ATCCCATCAATGAAGCTCCT+AGG 0.559782 2_3:+32917478 None:intergenic
ATCAATGAAGCTCCTAGGAT+CGG 0.561148 2_3:+32917483 None:intergenic
CACTTACCCGTTACTGACTG+TGG 0.562180 2_3:+32917823 None:intergenic
TCCAGTACCACAGTCAGTAA+CGG 0.563885 2_3:-32917830 Msa0288270:CDS
CTGTCACCAAATATTTGAGT+CGG 0.571786 2_3:+32911367 None:intergenic
ACATGGGTTGTCCCTAGGTG+TGG 0.573384 2_3:-32914860 Msa0288270:CDS
TTGTACACAGTCTTGAGGGT+TGG 0.575910 2_3:-32911509 Msa0288270:CDS
GCAGATGTTAACACTATCAA+CGG 0.576554 2_3:-32912453 Msa0288270:intron
TCTGAATGGTAGAGAAGCAA+AGG 0.579037 2_3:+32915000 None:intergenic
AGGAGTTGTACACAGTCTTG+AGG 0.584910 2_3:-32911514 Msa0288270:CDS
TAGACAATATGAGCAAATGA+AGG 0.585219 2_3:+32918476 None:intergenic
ACAGAATTGAGCATGCATAG+AGG 0.586263 2_3:+32915030 None:intergenic
TGATCACCTCACAGCAGCCA+AGG 0.590974 2_3:+32912180 None:intergenic
CAGGTGCTCCAAAACCGTAC+CGG 0.593469 2_3:+32917530 None:intergenic
TAAAGGAGCTCCCATTTCAA+AGG 0.594235 2_3:+32918727 None:intergenic
ACCGTCAGATTCTTAAACAG+GGG 0.596742 2_3:-32918390 Msa0288270:CDS
GTCACCAAATATTTGAGTCG+GGG 0.597780 2_3:+32911369 None:intergenic
TTGTAGGGGTCATTTAAATG+TGG 0.601317 2_3:-32911301 Msa0288270:three_prime_UTR
TCCAAGCTTAGAAGTAGCCC+CGG 0.602648 2_3:+32913014 None:intergenic
GGGGTAGACTACATCAAACA+TGG 0.605971 2_3:-32914877 Msa0288270:CDS
AAATTTGATGCAGTACACAA+TGG 0.607509 2_3:-32911568 Msa0288270:intron
TTTCCTAGTGCGTCAAAGAG+AGG 0.607939 2_3:+32917145 None:intergenic
TGCAGCTATGATGTTTCATG+TGG 0.608012 2_3:-32917941 Msa0288270:CDS
AACCGTCAGATTCTTAAACA+GGG 0.613161 2_3:-32918391 Msa0288270:CDS
GAATGCAGGAAATTGTAGTA+GGG 0.620480 2_3:-32915095 Msa0288270:intron
GCAGAATGAATCTCTAAATG+GGG 0.622181 2_3:-32913157 Msa0288270:intron
AATATCCCAAAGTTCTCCCA+TGG 0.622512 2_3:+32918695 None:intergenic
AGACATGGATTGTTGGCAAG+TGG 0.625631 2_3:-32912340 Msa0288270:CDS
GGTTTCTAATCAGTTTGTAG+GGG 0.627216 2_3:-32911315 Msa0288270:three_prime_UTR
TTGAAAGGATCGATGTTGTG+TGG 0.627606 2_3:-32911458 Msa0288270:CDS
CCACCTGAAAGCCACACCTA+GGG 0.627760 2_3:+32914849 None:intergenic
TGGTGTTAAAGTCATCAGCT+TGG 0.628526 2_3:-32914581 Msa0288270:CDS
TGTGTACAACTCCTCCTGCA+TGG 0.630412 2_3:+32911523 None:intergenic
CCCACCTGAAAGCCACACCT+AGG 0.636360 2_3:+32914848 None:intergenic
CCGTCAGATTCTTAAACAGG+GGG 0.638041 2_3:-32918389 Msa0288270:CDS
TATGCGATTGCCAGATGATG+TGG 0.638042 2_3:-32912207 Msa0288270:CDS
GAATTGAATGGTGAAGTGAA+TGG 0.638759 2_3:+32917851 None:intergenic
GGAAGGCCTTGGCTGCTGTG+AGG 0.644130 2_3:-32912186 Msa0288270:intron
TGGAAAGCAGCACTAAAACA+TGG 0.657991 2_3:-32911438 Msa0288270:CDS
TTTCAGTGTGGTGTAGAGTG+TGG 0.670438 2_3:+32917194 None:intergenic
CAGAATGAATCTCTAAATGG+GGG 0.673905 2_3:-32913156 Msa0288270:CDS
GTTCACGCATGCCATGCAGG+AGG 0.682221 2_3:-32911534 Msa0288270:CDS
ACTGTGGTACTGGAATTGAA+TGG 0.684367 2_3:+32917839 None:intergenic
GAGCAAAATTGGGCTCCACG+TGG 0.686831 2_3:-32912305 Msa0288270:CDS
GTACACAATGGATAGAGGAG+TGG 0.689093 2_3:-32911556 Msa0288270:CDS
GGGTAGACTACATCAAACAT+GGG 0.706763 2_3:-32914876 Msa0288270:CDS
GCAGCTATGATGTTTCATGT+GGG 0.713734 2_3:-32917940 Msa0288270:CDS
CGATTGCCAGATGATGTGGA+AGG 0.713769 2_3:-32912203 Msa0288270:CDS
ACAGTGGAACCCGAAGACAA+AGG 0.726600 2_3:+32911408 None:intergenic
TGGTGGAAATGAGTTCCACG+TGG 0.765678 2_3:+32912290 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATATATTTTTTTTTTT+TGG - chr2_3:32915793-32915812 Msa0288270:intron 0.0%
!!! ATATTAATTATTTTTATTAT+GGG + chr2_3:32915838-32915857 None:intergenic 0.0%
!!! AATTATAAAATAATTTTTTA+TGG - chr2_3:32915879-32915898 Msa0288270:intron 0.0%
!!! ATTTATTTTATTTCAACTAA+AGG - chr2_3:32912683-32912702 Msa0288270:intron 10.0%
!!! AATCAAAAAAAATATTTTAC+AGG + chr2_3:32913008-32913027 None:intergenic 10.0%
!!! AATTTTTTTTTTTTTACAGA+GGG + chr2_3:32913033-32913052 None:intergenic 10.0%
!!! TGAAAAAAATATATTTTACA+GGG - chr2_3:32913139-32913158 Msa0288270:CDS 10.0%
!!! TTTTAATATTTTTAGAAGTT+TGG + chr2_3:32913323-32913342 None:intergenic 10.0%
!! AGTATAAATTATAAATCATA+GGG - chr2_3:32913545-32913564 Msa0288270:intron 10.0%
!! AGAAATTATTAGAAAAAAAA+TGG - chr2_3:32914249-32914268 Msa0288270:intron 10.0%
!! ATTAGTAATTATTAAATTTG+TGG - chr2_3:32914852-32914871 Msa0288270:intron 10.0%
!! AAAAAATTATATAATATACC+TGG + chr2_3:32915761-32915780 None:intergenic 10.0%
!! AATTAATGTTCAATTTATAA+AGG + chr2_3:32915987-32916006 None:intergenic 10.0%
!!! AATTATTTAAGTTGAATTAA+AGG - chr2_3:32918654-32918673 Msa0288270:intron 10.0%
!!! ATTATTTAAGTTGAATTAAA+GGG - chr2_3:32918655-32918674 Msa0288270:intron 10.0%
!! ACTTATAATAACCTATATAT+AGG + chr2_3:32911188-32911207 None:intergenic 15.0%
!!! TTTTTTTTGCTTTTCTAATT+TGG - chr2_3:32911910-32911929 Msa0288270:intron 15.0%
!! TTTAATTCTTCAAACAATAT+TGG - chr2_3:32911960-32911979 Msa0288270:intron 15.0%
!! TATATGATATATCTCATAAA+CGG + chr2_3:32912646-32912665 None:intergenic 15.0%
!! AAAATAAATTAACTTACGTT+GGG + chr2_3:32912672-32912691 None:intergenic 15.0%
!! TAAAATAAATTAACTTACGT+TGG + chr2_3:32912673-32912692 None:intergenic 15.0%
!!! GAATTTTTTTTTTTTTACAG+AGG + chr2_3:32913034-32913053 None:intergenic 15.0%
!!! CTGAAAAAAATATATTTTAC+AGG - chr2_3:32913138-32913157 Msa0288270:CDS 15.0%
!!! GAAAAAAATATATTTTACAG+GGG - chr2_3:32913140-32913159 Msa0288270:CDS 15.0%
!!! AAAAAAATATATTTTACAGG+GGG - chr2_3:32913141-32913160 Msa0288270:CDS 15.0%
!! ATTGTAGTAACTAAATATAT+TGG - chr2_3:32913459-32913478 Msa0288270:intron 15.0%
!! AAAATGAAAAAAAATACTTC+TGG + chr2_3:32913507-32913526 None:intergenic 15.0%
!! GAGTATAAATTATAAATCAT+AGG - chr2_3:32913544-32913563 Msa0288270:intron 15.0%
!! GTATAAATTATAAATCATAG+GGG - chr2_3:32913546-32913565 Msa0288270:intron 15.0%
!!! CTTACTTTTTTTTATCATTT+TGG - chr2_3:32913660-32913679 Msa0288270:intron 15.0%
!!! TTGGTCATATAATTAATTTT+TGG - chr2_3:32913679-32913698 Msa0288270:intron 15.0%
!!! AATACATTTAATTTTACTGA+GGG - chr2_3:32913758-32913777 Msa0288270:intron 15.0%
!!! TAATTTTCTTTTTATCCTTT+CGG + chr2_3:32914147-32914166 None:intergenic 15.0%
!! AAAGGATAAAAAGAAAATTA+AGG - chr2_3:32914147-32914166 Msa0288270:intron 15.0%
!!! ATTTTTCTAATTTAGATGAA+AGG - chr2_3:32914290-32914309 Msa0288270:intron 15.0%
!!! CGTTATATTTACTTTTTTTA+AGG - chr2_3:32914363-32914382 Msa0288270:intron 15.0%
!!! AAATCAAATGTGTTATTTTA+TGG - chr2_3:32914510-32914529 Msa0288270:intron 15.0%
!!! TGAATTTTTGAAATATTGTT+TGG - chr2_3:32914536-32914555 Msa0288270:intron 15.0%
!! CTTATTATGAAAAATACAAT+AGG + chr2_3:32914807-32914826 None:intergenic 15.0%
!!! CTATTGTATTTTTCATAATA+AGG - chr2_3:32914805-32914824 Msa0288270:intron 15.0%
!!! TTTTAAGAAATTCTTTTAAC+AGG - chr2_3:32915269-32915288 Msa0288270:intron 15.0%
!!! TTTAAGAAATTCTTTTAACA+GGG - chr2_3:32915270-32915289 Msa0288270:intron 15.0%
!!! AGATGTACTTTTTTTTTTTT+TGG + chr2_3:32915588-32915607 None:intergenic 15.0%
!! ATGTAAATAGCTATAAATAA+AGG - chr2_3:32916330-32916349 Msa0288270:intron 15.0%
!!! TTTTCAATTCATATGATAAA+TGG + chr2_3:32916392-32916411 None:intergenic 15.0%
!! GTACAATTTAGAAATTTATT+TGG + chr2_3:32916618-32916637 None:intergenic 15.0%
!!! ATTTAGTAATTAGTTCTATA+TGG + chr2_3:32917341-32917360 None:intergenic 15.0%
!!! AATAGTTTTAAAATTGGAAA+CGG + chr2_3:32918819-32918838 None:intergenic 15.0%
!! TCATCACATAATTAAATTTG+AGG - chr2_3:32911137-32911156 Msa0288270:three_prime_UTR 20.0%
!! CATCACATAATTAAATTTGA+GGG - chr2_3:32911138-32911157 Msa0288270:three_prime_UTR 20.0%
!! AGTAGTAGAAAAAATAGAAT+AGG + chr2_3:32911882-32911901 None:intergenic 20.0%
!!! TTTGGTGAAAGTTTTAATAA+TGG + chr2_3:32912207-32912226 None:intergenic 20.0%
!! TTACTAATAAATATGAAGCA+CGG + chr2_3:32912418-32912437 None:intergenic 20.0%
!! AAATAAATTAACTTACGTTG+GGG + chr2_3:32912671-32912690 None:intergenic 20.0%
!! TTAAAAAAGTCATAGTTAGT+AGG - chr2_3:32912934-32912953 Msa0288270:intron 20.0%
!! TAAAAAAGTCATAGTTAGTA+GGG - chr2_3:32912935-32912954 Msa0288270:intron 20.0%
!!! CAAAAAAAATATTTTACAGG+AGG + chr2_3:32913005-32913024 None:intergenic 20.0%
!!! CAAAAATTTTGGTTTTTGTA+TGG + chr2_3:32913069-32913088 None:intergenic 20.0%
!!! TCAAAAAACATATTTTACAG+AGG - chr2_3:32913168-32913187 Msa0288270:intron 20.0%
!!! CAAAAAACATATTTTACAGA+GGG - chr2_3:32913169-32913188 Msa0288270:intron 20.0%
!!! TTTAGACTAAATTGCTTTTT+TGG - chr2_3:32913630-32913649 Msa0288270:intron 20.0%
!! CTCAGTAAAATTAAATGTAT+TGG + chr2_3:32913759-32913778 None:intergenic 20.0%
!!! CAATACATTTAATTTTACTG+AGG - chr2_3:32913757-32913776 Msa0288270:intron 20.0%
!! TGTAAAATCATGTTATAGTT+AGG + chr2_3:32913874-32913893 None:intergenic 20.0%
!!! TCAACAAAATATTTAAAGTG+GGG + chr2_3:32913903-32913922 None:intergenic 20.0%
!!! GTCAACAAAATATTTAAAGT+GGG + chr2_3:32913904-32913923 None:intergenic 20.0%
!! AGTCAACAAAATATTTAAAG+TGG + chr2_3:32913905-32913924 None:intergenic 20.0%
!!! AATTTTCTTTTTATCCTTTC+GGG + chr2_3:32914146-32914165 None:intergenic 20.0%
!! CAATTTAGAAATAAATCCAT+GGG + chr2_3:32914176-32914195 None:intergenic 20.0%
!! GTAGTAAAAAGAAACTAAAA+AGG + chr2_3:32915090-32915109 None:intergenic 20.0%
!!! TTTTTCTTTAGGCAATAATT+TGG + chr2_3:32915191-32915210 None:intergenic 20.0%
!! CCTAAAGAAAAAAAAAAGAA+GGG - chr2_3:32915199-32915218 Msa0288270:intron 20.0%
!! CTAAAGAAAAAAAAAAGAAG+GGG - chr2_3:32915200-32915219 Msa0288270:intron 20.0%
!! TAAAGAAAAAAAAAAGAAGG+GGG - chr2_3:32915201-32915220 Msa0288270:intron 20.0%
!!! ACTTTTATACTTTATGTTTG+AGG - chr2_3:32915473-32915492 Msa0288270:intron 20.0%
!! ATTATATAATATACCTGGAT+TGG + chr2_3:32915756-32915775 None:intergenic 20.0%
!!! ATTATTTTTATTATGGGCTT+TGG + chr2_3:32915832-32915851 None:intergenic 20.0%
!! GTTCAATTTATAAAGGTAAT+TGG + chr2_3:32915980-32915999 None:intergenic 20.0%
!! TTTGTCTGATATTACTAAAA+TGG - chr2_3:32916460-32916479 Msa0288270:intron 20.0%
!!! GTGCATTTAATTTAATTTCT+TGG - chr2_3:32916768-32916787 Msa0288270:intron 20.0%
!!! ATATTGATTTTGTTCATATG+TGG - chr2_3:32916807-32916826 Msa0288270:intron 20.0%
!! AGATCTAAACATATGTTTAT+AGG - chr2_3:32917138-32917157 Msa0288270:CDS 20.0%
!!! TATTTTTCTTCTTGCATTTT+TGG - chr2_3:32917230-32917249 Msa0288270:intron 20.0%
!!! AGAAATATGTTTTATGTCAT+TGG + chr2_3:32918347-32918366 None:intergenic 20.0%
!! TATTTGTGCACATTAAATAA+AGG - chr2_3:32918371-32918390 Msa0288270:CDS 20.0%
!!! AATAAAAGATTTTCCAACAA+TGG + chr2_3:32918762-32918781 None:intergenic 20.0%
!! AGCATTATTAGCCTATATAT+AGG - chr2_3:32911174-32911193 Msa0288270:three_prime_UTR 25.0%
! ACAATATAGTACGTGTTATA+TGG - chr2_3:32911423-32911442 Msa0288270:CDS 25.0%
! CAATATAGTACGTGTTATAT+GGG - chr2_3:32911424-32911443 Msa0288270:CDS 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr2_3:32911750-32911769 None:intergenic 25.0%
!! TTCTAAAAGATTAGCTATGT+CGG - chr2_3:32911780-32911799 Msa0288270:intron 25.0%
!!! TAACCATAGAAGTACTAATT+TGG + chr2_3:32912225-32912244 None:intergenic 25.0%
! TTAGTACTTCTATGGTTAAT+TGG - chr2_3:32912227-32912246 Msa0288270:CDS 25.0%
! TCAAATTAGTGAGAACATAT+AGG - chr2_3:32912258-32912277 Msa0288270:CDS 25.0%
! TTTCAAATTATTAGCTGTGT+CGG - chr2_3:32912351-32912370 Msa0288270:CDS 25.0%
! TGAAAATGACCTATATTACA+GGG + chr2_3:32912976-32912995 None:intergenic 25.0%
! AAAAAAAATTCAGCCCTAAT+AGG - chr2_3:32913043-32913062 Msa0288270:CDS 25.0%
! ATAATCTTAAGGGACTTAAA+CGG + chr2_3:32913706-32913725 None:intergenic 25.0%
! TGAAATAGAAACTAAAGAGT+GGG + chr2_3:32913851-32913870 None:intergenic 25.0%
! CCAATTTAGAAATAAATCCA+TGG + chr2_3:32914177-32914196 None:intergenic 25.0%
!!! CCATGGATTTATTTCTAAAT+TGG - chr2_3:32914174-32914193 Msa0288270:intron 25.0%
! ATAGTGACATCATTATCATT+AGG + chr2_3:32914666-32914685 None:intergenic 25.0%
! AAAAGAAACTAAAAAGGTCT+TGG + chr2_3:32915084-32915103 None:intergenic 25.0%
! GCCTAAAGAAAAAAAAAAGA+AGG - chr2_3:32915198-32915217 Msa0288270:intron 25.0%
!!! CCCTTCTTTTTTTTTTCTTT+AGG + chr2_3:32915202-32915221 None:intergenic 25.0%
!! CTTTTAACAGGGTAATTTTA+AGG - chr2_3:32915281-32915300 Msa0288270:intron 25.0%
!! TTTAACACCAATTTTATCAG+CGG + chr2_3:32915400-32915419 None:intergenic 25.0%
!!! TTTTTTTTTTTTGGCGTCTA+AGG + chr2_3:32915579-32915598 None:intergenic 25.0%
!! TAGCATATAGCTTTTCAAAA+CGG + chr2_3:32915615-32915634 None:intergenic 25.0%
!!! TTTTTTTTTGGTGAACAAAG+AGG - chr2_3:32915805-32915824 Msa0288270:intron 25.0%
!!! TTTTTTTTGGTGAACAAAGA+GGG - chr2_3:32915806-32915825 Msa0288270:intron 25.0%
!! TATGGCTATCTCTATTATTT+TGG - chr2_3:32915897-32915916 Msa0288270:intron 25.0%
! TAGTATATATTACTCGTACA+TGG - chr2_3:32916177-32916196 Msa0288270:intron 25.0%
!!! AGAGTCTTTTGTTTTTTGAA+AGG - chr2_3:32916667-32916686 Msa0288270:intron 25.0%
! CTATATACTATATACGAATG+TGG + chr2_3:32916738-32916757 None:intergenic 25.0%
!!! AATTAATCCTGTTTTTCCTT+AGG - chr2_3:32917049-32917068 Msa0288270:intron 25.0%
! TAAACATATGTTTATAGGCA+GGG - chr2_3:32917143-32917162 Msa0288270:CDS 25.0%
!! TTATAGGTGAGGTATTTATT+CGG - chr2_3:32917441-32917460 Msa0288270:intron 25.0%
! TAGATTTCAGAAGATTCAAA+AGG - chr2_3:32917562-32917581 Msa0288270:intron 25.0%
! AAGATAACTTTGGTATTCTT+CGG + chr2_3:32917594-32917613 None:intergenic 25.0%
! TCTCTTCTAAATGCAAAAAT+TGG + chr2_3:32917740-32917759 None:intergenic 25.0%
TAGACAATATGAGCAAATGA+AGG + chr2_3:32911518-32911537 None:intergenic 30.0%
TTAAGAGTTGTAATGAAGCA+CGG + chr2_3:32911847-32911866 None:intergenic 30.0%
!! TCAAACAATATTGGCTTCTA+TGG - chr2_3:32911969-32911988 Msa0288270:intron 30.0%
! AATGGAAGATTTTGTAGGAA+TGG + chr2_3:32912009-32912028 None:intergenic 30.0%
TCCTACAAAATCTTCCATTA+TGG - chr2_3:32912010-32912029 Msa0288270:intron 30.0%
!! TCCATAATGGAAGATTTTGT+AGG + chr2_3:32912014-32912033 None:intergenic 30.0%
CTTCCATTATGGAACATTAA+AGG - chr2_3:32912021-32912040 Msa0288270:intron 30.0%
ACACCTTTAATGTTCCATAA+TGG + chr2_3:32912027-32912046 None:intergenic 30.0%
TCTCAGAACCACTTTATTAT+TGG - chr2_3:32912076-32912095 Msa0288270:intron 30.0%
CTCAGAACCACTTTATTATT+GGG - chr2_3:32912077-32912096 Msa0288270:intron 30.0%
TTATGCACCCAATAATAAAG+TGG + chr2_3:32912087-32912106 None:intergenic 30.0%
TCACCAAATTAGTACTTCTA+TGG - chr2_3:32912219-32912238 Msa0288270:CDS 30.0%
TTCAGTGTAATTACAAGTGT+CGG + chr2_3:32912319-32912338 None:intergenic 30.0%
ATAAATATGAAGCACGGATA+CGG + chr2_3:32912412-32912431 None:intergenic 30.0%
GGATCAACAAGTATGATATA+TGG - chr2_3:32912538-32912557 Msa0288270:intron 30.0%
!!! TTTTGATTTTCTCCGAAGTT+TGG - chr2_3:32912573-32912592 Msa0288270:intron 30.0%
!! TTTGATTTTCTCCGAAGTTT+GGG - chr2_3:32912574-32912593 Msa0288270:intron 30.0%
GAACAATTTCAACATTGCAA+TGG + chr2_3:32912600-32912619 None:intergenic 30.0%
TTTGTGTAATTCCCATGATT+TGG + chr2_3:32912883-32912902 None:intergenic 30.0%
TTACACAAATCATTCAGTTC+AGG - chr2_3:32912894-32912913 Msa0288270:intron 30.0%
GAAAATGACCTATATTACAG+GGG + chr2_3:32912975-32912994 None:intergenic 30.0%
CTGAAAATGACCTATATTAC+AGG + chr2_3:32912977-32912996 None:intergenic 30.0%
!! CTGTAATATAGGTCATTTTC+AGG - chr2_3:32912975-32912994 Msa0288270:CDS 30.0%
!! TCGTTTTTGTATGACCTATT+AGG - chr2_3:32913108-32913127 Msa0288270:CDS 30.0%
! CGTTTTTGTATGACCTATTA+GGG - chr2_3:32913109-32913128 Msa0288270:CDS 30.0%
! GTTTTTGTATGACCTATTAG+GGG - chr2_3:32913110-32913129 Msa0288270:CDS 30.0%
! TTTTTGTATGACCTATTAGG+GGG - chr2_3:32913111-32913130 Msa0288270:CDS 30.0%
! TCTGGAATATAGATCATTTC+CGG + chr2_3:32913200-32913219 None:intergenic 30.0%
GAAATGATCTATATTCCAGA+GGG - chr2_3:32913200-32913219 Msa0288270:intron 30.0%
!! ACCTTAATTTGCTTCTTGTT+AGG + chr2_3:32913241-32913260 None:intergenic 30.0%
!!! AAGATGCTGCATTTTTTCAT+AGG + chr2_3:32913292-32913311 None:intergenic 30.0%
AAAAAACGAACTCACGTAAT+CGG + chr2_3:32913375-32913394 None:intergenic 30.0%
GTGTAACGAGATAATCTTAA+GGG + chr2_3:32913716-32913735 None:intergenic 30.0%
GAAATAGAAACTAAAGAGTG+GGG + chr2_3:32913850-32913869 None:intergenic 30.0%
GTGAAATAGAAACTAAAGAG+TGG + chr2_3:32913852-32913871 None:intergenic 30.0%
TAACCCAACTAATACACTAT+GGG - chr2_3:32913930-32913949 Msa0288270:intron 30.0%
TTACCCATAGTGTATTAGTT+GGG + chr2_3:32913936-32913955 None:intergenic 30.0%
TTTACCCATAGTGTATTAGT+TGG + chr2_3:32913937-32913956 None:intergenic 30.0%
TAGTGTTATCACAAATTACG+AGG - chr2_3:32914047-32914066 Msa0288270:intron 30.0%
AATTACGAGGAAGAAAACAT+TGG - chr2_3:32914060-32914079 Msa0288270:intron 30.0%
! TGATCTCTCAAGAAAGTTTT+TGG - chr2_3:32914315-32914334 Msa0288270:intron 30.0%
TGGTAACATTCATAGACAAT+CGG - chr2_3:32914556-32914575 Msa0288270:intron 30.0%
TGCTCATAATCTCTGATTTA+TGG - chr2_3:32914585-32914604 Msa0288270:CDS 30.0%
ACTCCACTTATTGAAATTTC+TGG - chr2_3:32914742-32914761 Msa0288270:intron 30.0%
GATCCAGAAATTTCAATAAG+TGG + chr2_3:32914748-32914767 None:intergenic 30.0%
! TAGTTTCTTTTTACTACCTC+AGG - chr2_3:32915093-32915112 Msa0288270:intron 30.0%
! AGTTTCTTTTTACTACCTCA+GGG - chr2_3:32915094-32915113 Msa0288270:intron 30.0%
AACAAAAGACTCTCACTAAA+CGG + chr2_3:32916660-32916679 None:intergenic 30.0%
ATGCAGAATGAATCTCTAAA+TGG - chr2_3:32916832-32916851 Msa0288270:intron 30.0%
TGCAGAATGAATCTCTAAAT+GGG - chr2_3:32916833-32916852 Msa0288270:intron 30.0%
AAAACTTCTTTGGCATCTTT+AGG + chr2_3:32916952-32916971 None:intergenic 30.0%
!!! CCAGAATTTTGACTTTCTTT+TGG + chr2_3:32917026-32917045 None:intergenic 30.0%
CCAAAAGAAAGTCAAAATTC+TGG - chr2_3:32917023-32917042 Msa0288270:intron 30.0%
TTGGTAAAATGAGAAACCTA+AGG + chr2_3:32917068-32917087 None:intergenic 30.0%
! ATCCTCTTTGTTGCTTATTA+AGG - chr2_3:32917093-32917112 Msa0288270:intron 30.0%
! TCCTCTTTGTTGCTTATTAA+GGG - chr2_3:32917094-32917113 Msa0288270:intron 30.0%
CTAAACATATGTTTATAGGC+AGG - chr2_3:32917142-32917161 Msa0288270:CDS 30.0%
CAATTTCATTGTTTCGTCTA+GGG + chr2_3:32917190-32917209 None:intergenic 30.0%
ACAATTTCATTGTTTCGTCT+AGG + chr2_3:32917191-32917210 None:intergenic 30.0%
AAATACCTCACCTATAAACA+GGG + chr2_3:32917438-32917457 None:intergenic 30.0%
TAAATACCTCACCTATAAAC+AGG + chr2_3:32917439-32917458 None:intergenic 30.0%
! TATAGGTGAGGTATTTATTC+GGG - chr2_3:32917442-32917461 Msa0288270:intron 30.0%
CAATTACCACTACTAATGAA+CGG - chr2_3:32917496-32917515 Msa0288270:CDS 30.0%
AATTACCACTACTAATGAAC+GGG - chr2_3:32917497-32917516 Msa0288270:CDS 30.0%
TTAACATCTGCAAATTCAAG+TGG + chr2_3:32917529-32917548 None:intergenic 30.0%
AGATAACTTTGGTATTCTTC+GGG + chr2_3:32917593-32917612 None:intergenic 30.0%
TGACTTGAACAAGATAACTT+TGG + chr2_3:32917604-32917623 None:intergenic 30.0%
AAATTGGAGGAACAACAAAT+TGG + chr2_3:32917724-32917743 None:intergenic 30.0%
CTTCTAAATGCAAAAATTGG+AGG + chr2_3:32917737-32917756 None:intergenic 30.0%
TTTAGAAGAGATTGCACTTA+TGG - chr2_3:32917749-32917768 Msa0288270:intron 30.0%
CATAAACTCGTTGTCAATAT+CGG + chr2_3:32917938-32917957 None:intergenic 30.0%
ATATCATGTTGATCTGATAG+TGG + chr2_3:32918308-32918327 None:intergenic 30.0%
AAATTTGATGCAGTACACAA+TGG - chr2_3:32918423-32918442 Msa0288270:CDS 30.0%
!! TTTTCAATTTGCTTTGACAG+TGG + chr2_3:32918602-32918621 None:intergenic 30.0%
TAAATGTTCACATCCATTGT+TGG - chr2_3:32918746-32918765 Msa0288270:five_prime_UTR 30.0%
TACACTACTCTTCCTACAAA+CGG + chr2_3:32911450-32911469 None:intergenic 35.0%
!! CTCATATTGTCTAGTCTTAG+AGG - chr2_3:32911525-32911544 Msa0288270:CDS 35.0%
AAACCGTCAGATTCTTAAAC+AGG - chr2_3:32911599-32911618 Msa0288270:intron 35.0%
AACCGTCAGATTCTTAAACA+GGG - chr2_3:32911600-32911619 Msa0288270:intron 35.0%
TATGAAGCACAAACACTCAT+CGG - chr2_3:32911672-32911691 Msa0288270:intron 35.0%
! TTGGTTGTTTCGTAACTAAC+AGG - chr2_3:32911929-32911948 Msa0288270:intron 35.0%
! TGGTTGTTTCGTAACTAACA+GGG - chr2_3:32911930-32911949 Msa0288270:intron 35.0%
ATGGTGAAGTGAATGGTATT+TGG + chr2_3:32912136-32912155 None:intergenic 35.0%
GAATTGAATGGTGAAGTGAA+TGG + chr2_3:32912143-32912162 None:intergenic 35.0%
!! TAACGTACTTTTGTTTGCAG+CGG - chr2_3:32912435-32912454 Msa0288270:CDS 35.0%
CAATTACTAACGACAGAAAC+AGG + chr2_3:32912483-32912502 None:intergenic 35.0%
!! CTGTTTCTGTCGTTAGTAAT+TGG - chr2_3:32912481-32912500 Msa0288270:intron 35.0%
! AATGTTTGAAACAGACGATG+TGG + chr2_3:32912622-32912641 None:intergenic 35.0%
! AATTAGAGTCCTTTTCAGTG+TGG + chr2_3:32912812-32912831 None:intergenic 35.0%
GTCATAGTTAGTAGGGTTAA+TGG - chr2_3:32912942-32912961 Msa0288270:intron 35.0%
! GTGTTTTACCCCTGTAATAT+AGG - chr2_3:32912964-32912983 Msa0288270:intron 35.0%
! GGTTTTTGTATGGCCTATTA+GGG + chr2_3:32913059-32913078 None:intergenic 35.0%
! TGGTTTTTGTATGGCCTATT+AGG + chr2_3:32913060-32913079 None:intergenic 35.0%
! TTTTCAGAATACCCCCTAAT+AGG + chr2_3:32913125-32913144 None:intergenic 35.0%
! TATTTTACAGAGGGTAAACC+CGG - chr2_3:32913178-32913197 Msa0288270:intron 35.0%
CTGGAATATAGATCATTTCC+GGG + chr2_3:32913199-32913218 None:intergenic 35.0%
GGAAATGATCTATATTCCAG+AGG - chr2_3:32913199-32913218 Msa0288270:intron 35.0%
GCCTAACAAGAAGCAAATTA+AGG - chr2_3:32913237-32913256 Msa0288270:intron 35.0%
!!! GATTACGTGAGTTCGTTTTT+TGG - chr2_3:32913374-32913393 Msa0288270:intron 35.0%
CGTGTAACGAGATAATCTTA+AGG + chr2_3:32913717-32913736 None:intergenic 35.0%
!! AGTGTATTAGTTGGGTTAGT+TGG + chr2_3:32913928-32913947 None:intergenic 35.0%
CTAACCCAACTAATACACTA+TGG - chr2_3:32913929-32913948 Msa0288270:intron 35.0%
AAAAAGAAAATGCTCCCGAA+AGG - chr2_3:32914129-32914148 Msa0288270:intron 35.0%
AAGAAAATTAAGGTAGCCCA+TGG - chr2_3:32914157-32914176 Msa0288270:intron 35.0%
CGACGACTATAATTGTTGAA+AGG - chr2_3:32914459-32914478 Msa0288270:intron 35.0%
! GTATTTGTATTGACGAATGC+AGG - chr2_3:32914882-32914901 Msa0288270:intron 35.0%
GAATGCAGGAAATTGTAGTA+GGG - chr2_3:32914896-32914915 Msa0288270:intron 35.0%
GGATGTGATATCCACTATAT+GGG + chr2_3:32914943-32914962 None:intergenic 35.0%
AGGATGTGATATCCACTATA+TGG + chr2_3:32914944-32914963 None:intergenic 35.0%
! AAGAAGAACCTTGTTCTGAA+TGG + chr2_3:32915008-32915027 None:intergenic 35.0%
!!! CTTGATCCCATTTTTTCCAA+TGG - chr2_3:32915025-32915044 Msa0288270:CDS 35.0%
! GTTTCTTTTTACTACCTCAG+GGG - chr2_3:32915095-32915114 Msa0288270:intron 35.0%
!!! TTTTTTGCCATTTGCTACTG+AGG - chr2_3:32915341-32915360 Msa0288270:intron 35.0%
!! TTTTTGCCATTTGCTACTGA+GGG - chr2_3:32915342-32915361 Msa0288270:intron 35.0%
ATTCTCACCGCTGATAAAAT+TGG - chr2_3:32915390-32915409 Msa0288270:intron 35.0%
ATCAACTGAGTTAAGCTCAT+GGG + chr2_3:32915537-32915556 None:intergenic 35.0%
AAAAAAAAGCTAGCCAATCC+AGG - chr2_3:32915740-32915759 Msa0288270:intron 35.0%
TAAAGGTAATTGGCCAAAGT+TGG + chr2_3:32915970-32915989 None:intergenic 35.0%
AAAACAGTAAAGAGCCAAAG+TGG - chr2_3:32916040-32916059 Msa0288270:intron 35.0%
CCTATGTAATAGTTCCACTT+TGG + chr2_3:32916057-32916076 None:intergenic 35.0%
CCAAAGTGGAACTATTACAT+AGG - chr2_3:32916054-32916073 Msa0288270:intron 35.0%
ATTCTCTCTCTCTCTTCAAA+TGG - chr2_3:32916224-32916243 Msa0288270:intron 35.0%
TCTCATTTCATGTGATACGA+AGG + chr2_3:32916271-32916290 None:intergenic 35.0%
TATTATACACACACACACGT+TGG - chr2_3:32916518-32916537 Msa0288270:intron 35.0%
CGGAAACATCTCTTCATATA+AGG + chr2_3:32916640-32916659 None:intergenic 35.0%
GCAGAATGAATCTCTAAATG+GGG - chr2_3:32916834-32916853 Msa0288270:intron 35.0%
CAGAATGAATCTCTAAATGG+GGG - chr2_3:32916835-32916854 Msa0288270:intron 35.0%
!!! TTTTGACTTTCTTTTGGCAG+AGG + chr2_3:32917020-32917039 None:intergenic 35.0%
TGAGAAACCTAAGGAAAAAC+AGG + chr2_3:32917059-32917078 None:intergenic 35.0%
GCAACAAAGAGGATATAAGT+TGG + chr2_3:32917087-32917106 None:intergenic 35.0%
ACCCTTAATAAGCAACAAAG+AGG + chr2_3:32917098-32917117 None:intergenic 35.0%
! TCTAGGGCATCAAAAATCTT+AGG + chr2_3:32917174-32917193 None:intergenic 35.0%
TTCTGATGCCCCTAAAAAAA+TGG - chr2_3:32917372-32917391 Msa0288270:intron 35.0%
AATACCTCACCTATAAACAG+GGG + chr2_3:32917437-32917456 None:intergenic 35.0%
! TGAGGTATTTATTCGGGTAT+AGG - chr2_3:32917448-32917467 Msa0288270:intron 35.0%
GCAGATGTTAACACTATCAA+CGG - chr2_3:32917538-32917557 Msa0288270:CDS 35.0%
ACCTTCTGATTGAGATTAGA+CGG + chr2_3:32917968-32917987 None:intergenic 35.0%
! ACCTTGGTTTGAAATTGTTG+CGG - chr2_3:32918009-32918028 Msa0288270:CDS 35.0%
TCTCTCAAGGATTCTTTCTA+TGG - chr2_3:32918240-32918259 Msa0288270:intron 35.0%
AGTGGAAACAAAGTAATGCA+TGG + chr2_3:32918290-32918309 None:intergenic 35.0%
TTGGAGCTATTGATGTTGAA+AGG - chr2_3:32918518-32918537 Msa0288270:CDS 35.0%
AAAACCCCGACTCAAATATT+TGG - chr2_3:32918618-32918637 Msa0288270:intron 35.0%
TGTCACCAAATATTTGAGTC+GGG + chr2_3:32918626-32918645 None:intergenic 35.0%
CTGTCACCAAATATTTGAGT+CGG + chr2_3:32918627-32918646 None:intergenic 35.0%
AGGGTTTCTAATCAGTTTGT+AGG - chr2_3:32918674-32918693 Msa0288270:intron 35.0%
GGGTTTCTAATCAGTTTGTA+GGG - chr2_3:32918675-32918694 Msa0288270:intron 35.0%
GGTTTCTAATCAGTTTGTAG+GGG - chr2_3:32918676-32918695 Msa0288270:intron 35.0%
TTGTAGGGGTCATTTAAATG+TGG - chr2_3:32918690-32918709 Msa0288270:intron 35.0%
!! TCTAGCCAGTCCTTTGAAAT+GGG - chr2_3:32911254-32911273 Msa0288270:three_prime_UTR 40.0%
TAAAGGAGCTCCCATTTCAA+AGG + chr2_3:32911267-32911286 None:intergenic 40.0%
TCCTTTATCATCATGGCCAT+GGG - chr2_3:32911280-32911299 Msa0288270:three_prime_UTR 40.0%
AATATCCCAAAGTTCTCCCA+TGG + chr2_3:32911299-32911318 None:intergenic 40.0%
!! GGAGAACTTTGGGATATTCA+AGG - chr2_3:32911301-32911320 Msa0288270:three_prime_UTR 40.0%
AGAAAGACCTCAAATTCAGC+TGG - chr2_3:32911490-32911509 Msa0288270:CDS 40.0%
!! GAGGCTTGCTTTATTTGCTA+TGG - chr2_3:32911544-32911563 Msa0288270:CDS 40.0%
ACCGTCAGATTCTTAAACAG+GGG - chr2_3:32911601-32911620 Msa0288270:intron 40.0%
TCAAGCAGCTTGACAAAGAA+TGG - chr2_3:32911631-32911650 Msa0288270:intron 40.0%
CAAGCAGCTTGACAAAGAAT+GGG - chr2_3:32911632-32911651 Msa0288270:intron 40.0%
!! TATATGTGTCGGTGTCGTAT+CGG + chr2_3:32911739-32911758 None:intergenic 40.0%
GTTGTAATGAAGCACGGATA+CGG + chr2_3:32911841-32911860 None:intergenic 40.0%
TGCAGCTATGATGTTTCATG+TGG - chr2_3:32912050-32912069 Msa0288270:intron 40.0%
GCAGCTATGATGTTTCATGT+GGG - chr2_3:32912051-32912070 Msa0288270:intron 40.0%
TGGGTGCATAAGAAGTTTCA+TGG - chr2_3:32912096-32912115 Msa0288270:intron 40.0%
! ACTGTGGTACTGGAATTGAA+TGG + chr2_3:32912155-32912174 None:intergenic 40.0%
GAGAACATATAGGCATGTTC+CGG - chr2_3:32912268-32912287 Msa0288270:CDS 40.0%
!! AACGTACTTTTGTTTGCAGC+GGG - chr2_3:32912436-32912455 Msa0288270:CDS 40.0%
GTAATTGGAATTCCGATCCT+AGG - chr2_3:32912496-32912515 Msa0288270:intron 40.0%
ATCAATGAAGCTCCTAGGAT+CGG + chr2_3:32912511-32912530 None:intergenic 40.0%
ATCCTAGGAGCTTCATTGAT+GGG - chr2_3:32912511-32912530 Msa0288270:intron 40.0%
GAGTGTGGTATCTGCATAAA+AGG + chr2_3:32912785-32912804 None:intergenic 40.0%
ATACGCTTGACACCAAATCA+TGG - chr2_3:32912868-32912887 Msa0288270:intron 40.0%
TACGCTTGACACCAAATCAT+GGG - chr2_3:32912869-32912888 Msa0288270:intron 40.0%
! TGAAATTTCTGGATCCGTCA+TGG - chr2_3:32914753-32914772 Msa0288270:intron 40.0%
CGAATGCAGGAAATTGTAGT+AGG - chr2_3:32914895-32914914 Msa0288270:intron 40.0%
AGGAAATTGTAGTAGGGTAC+CGG - chr2_3:32914902-32914921 Msa0288270:intron 40.0%
ACAGAATTGAGCATGCATAG+AGG + chr2_3:32914964-32914983 None:intergenic 40.0%
TCTGAATGGTAGAGAAGCAA+AGG + chr2_3:32914994-32915013 None:intergenic 40.0%
CTTCTCTACCATTCAGAACA+AGG - chr2_3:32914997-32915016 Msa0288270:CDS 40.0%
CATTGCTAACAAAGCTACCA+CGG + chr2_3:32915051-32915070 None:intergenic 40.0%
!! TGGTAGCTTTGTTAGCAATG+TGG - chr2_3:32915051-32915070 Msa0288270:CDS 40.0%
CTTTGTTAGCAATGTGGCTT+TGG - chr2_3:32915057-32915076 Msa0288270:CDS 40.0%
GGGTAGACTACATCAAACAT+GGG - chr2_3:32915115-32915134 Msa0288270:intron 40.0%
!! AAGGGGGTAGTCTTATAAAG+AGG - chr2_3:32915217-32915236 Msa0288270:intron 40.0%
!! TTTTGCCATTTGCTACTGAG+GGG - chr2_3:32915343-32915362 Msa0288270:intron 40.0%
! TGGTGTTAAAGTCATCAGCT+TGG - chr2_3:32915410-32915429 Msa0288270:intron 40.0%
TCAACTGAGTTAAGCTCATG+GGG + chr2_3:32915536-32915555 None:intergenic 40.0%
CATCAACTGAGTTAAGCTCA+TGG + chr2_3:32915538-32915557 None:intergenic 40.0%
! GTAATTGGCCAAAGTTGGTT+TGG + chr2_3:32915965-32915984 None:intergenic 40.0%
!! ATTTCTTGGCTTTGCGAGAA+AGG - chr2_3:32916782-32916801 Msa0288270:intron 40.0%
AATGAATCTCTAAATGGGGG+AGG - chr2_3:32916838-32916857 Msa0288270:intron 40.0%
CAACTCGAACTCTTAGGTTT+GGG + chr2_3:32916885-32916904 None:intergenic 40.0%
ACAACTCGAACTCTTAGGTT+TGG + chr2_3:32916886-32916905 None:intergenic 40.0%
CATGAACAACTCGAACTCTT+AGG + chr2_3:32916891-32916910 None:intergenic 40.0%
!! CTAAGAGTTCGAGTTGTTCA+TGG - chr2_3:32916889-32916908 Msa0288270:intron 40.0%
TTTAACTGCAGCTGTGATCT+TGG - chr2_3:32916918-32916937 Msa0288270:intron 40.0%
! GCCAAAGAAGTTTTCCTTAC+CGG - chr2_3:32916958-32916977 Msa0288270:intron 40.0%
! CCAAAGAAGTTTTCCTTACC+GGG - chr2_3:32916959-32916978 Msa0288270:intron 40.0%
! CAAAGAAGTTTTCCTTACCG+GGG - chr2_3:32916960-32916979 Msa0288270:intron 40.0%
ATTAGCCCGTTCATTAGTAG+TGG + chr2_3:32917505-32917524 None:intergenic 40.0%
! CATTGCAAGACATGGATTGT+TGG - chr2_3:32917644-32917663 Msa0288270:intron 40.0%
TCACTCCAAGAGAGCAAAAT+TGG - chr2_3:32917675-32917694 Msa0288270:intron 40.0%
CACTCCAAGAGAGCAAAATT+GGG - chr2_3:32917676-32917695 Msa0288270:intron 40.0%
TTGGAGGAACAACAAATTGG+TGG + chr2_3:32917721-32917740 None:intergenic 40.0%
CTGATTGAGATTAGACGGTT+CGG + chr2_3:32917963-32917982 None:intergenic 40.0%
ACCGTCTAATCTCAATCAGA+AGG - chr2_3:32917964-32917983 Msa0288270:CDS 40.0%
ACCAAGGTTCCCTTCATTTA+GGG + chr2_3:32917997-32918016 None:intergenic 40.0%
AACCAAGGTTCCCTTCATTT+AGG + chr2_3:32917998-32918017 None:intergenic 40.0%
AATAGTTGAGCTACTTGTCG+CGG + chr2_3:32918035-32918054 None:intergenic 40.0%
ATGCAGTACACAATGGATAG+AGG - chr2_3:32918430-32918449 Msa0288270:CDS 40.0%
TTGAAAGGATCGATGTTGTG+TGG - chr2_3:32918533-32918552 Msa0288270:CDS 40.0%
TGGAAAGCAGCACTAAAACA+TGG - chr2_3:32918553-32918572 Msa0288270:intron 40.0%
! TGGTCTAAGACCTTTGTCTT+CGG - chr2_3:32918573-32918592 Msa0288270:intron 40.0%
GTCACCAAATATTTGAGTCG+GGG + chr2_3:32918625-32918644 None:intergenic 40.0%
! GTCTAGCCAGTCCTTTGAAA+TGG - chr2_3:32911253-32911272 Msa0288270:three_prime_UTR 45.0%
TGGGAGCTCCTTTATCATCA+TGG - chr2_3:32911273-32911292 Msa0288270:three_prime_UTR 45.0%
CTCCTTTATCATCATGGCCA+TGG - chr2_3:32911279-32911298 Msa0288270:three_prime_UTR 45.0%
TCCCATGGCCATGATGATAA+AGG + chr2_3:32911284-32911303 None:intergenic 45.0%
GTGTTATATGGGCCGTTTGT+AGG - chr2_3:32911435-32911454 Msa0288270:CDS 45.0%
CCCCCTGTTTAAGAATCTGA+CGG + chr2_3:32911605-32911624 None:intergenic 45.0%
CCGTCAGATTCTTAAACAGG+GGG - chr2_3:32911602-32911621 Msa0288270:intron 45.0%
AGCTTGACAAAGAATGGGAC+TGG - chr2_3:32911637-32911656 Msa0288270:intron 45.0%
GCACAAACACTCATCGGATA+AGG - chr2_3:32911678-32911697 Msa0288270:intron 45.0%
TCCAGTACCACAGTCAGTAA+CGG - chr2_3:32912161-32912180 Msa0288270:intron 45.0%
ATATAGGCATGTTCCGGTGT+CGG - chr2_3:32912274-32912293 Msa0288270:CDS 45.0%
GATCCTAGGAGCTTCATTGA+TGG - chr2_3:32912510-32912529 Msa0288270:intron 45.0%
ATCCCATCAATGAAGCTCCT+AGG + chr2_3:32912516-32912535 None:intergenic 45.0%
GGAGCTTCATTGATGGGATA+TGG - chr2_3:32912517-32912536 Msa0288270:intron 45.0%
CATTGCAATGGCCCAAACTT+CGG + chr2_3:32912588-32912607 None:intergenic 45.0%
TTTCAGTGTGGTGTAGAGTG+TGG + chr2_3:32912800-32912819 None:intergenic 45.0%
CACTCTACACCACACTGAAA+AGG - chr2_3:32912800-32912819 Msa0288270:intron 45.0%
! CGTCAAAGAGAGGCATGAAA+AGG + chr2_3:32912839-32912858 None:intergenic 45.0%
TTTCCTAGTGCGTCAAAGAG+AGG + chr2_3:32912849-32912868 None:intergenic 45.0%
! CTGTTGAGTGTTTTACCCTC+TGG + chr2_3:32913218-32913237 None:intergenic 45.0%
TCGTGCATGTCAGTCTATGA+AGG + chr2_3:32913797-32913816 None:intergenic 45.0%
GAATGCAGGTGAAGCCTATT+GGG - chr2_3:32913815-32913834 Msa0288270:intron 45.0%
AATGCAGGTGAAGCCTATTG+GGG - chr2_3:32913816-32913835 Msa0288270:intron 45.0%
!! GGTACCGGAATTTGTTTTCC+TGG - chr2_3:32914917-32914936 Msa0288270:intron 45.0%
TGGGCCAGGAAAACAAATTC+CGG + chr2_3:32914924-32914943 None:intergenic 45.0%
! TGTTTTCCTGGCCCATATAG+TGG - chr2_3:32914929-32914948 Msa0288270:intron 45.0%
TGATATCCACTATATGGGCC+AGG + chr2_3:32914938-32914957 None:intergenic 45.0%
CCACGGCCATTGGAAAAAAT+GGG + chr2_3:32915034-32915053 None:intergenic 45.0%
ACCACGGCCATTGGAAAAAA+TGG + chr2_3:32915035-32915054 None:intergenic 45.0%
TTTGATGTAGTCTACCCCTG+AGG + chr2_3:32915112-32915131 None:intergenic 45.0%
GGGGTAGACTACATCAAACA+TGG - chr2_3:32915114-32915133 Msa0288270:intron 45.0%
! ATCAAACATGGGTTGTCCCT+AGG - chr2_3:32915126-32915145 Msa0288270:intron 45.0%
TTGATCCCCTCAGTAGCAAA+TGG + chr2_3:32915351-32915370 None:intergenic 45.0%
! CAGCTTGGCTGCTTTGAATA+AGG - chr2_3:32915425-32915444 Msa0288270:intron 45.0%
! CTCAGTTGATGCAAAGTCTG+AGG - chr2_3:32915547-32915566 Msa0288270:intron 45.0%
! GTTGACGGATAGATACACGA+AGG + chr2_3:32915943-32915962 None:intergenic 45.0%
TCCGTCAACCAAACCAACTT+TGG - chr2_3:32915954-32915973 Msa0288270:intron 45.0%
!! GCCAAAGTTGGTTTGGTTGA+CGG + chr2_3:32915958-32915977 None:intergenic 45.0%
!! TGGCTAGCTTGATTTGGACT+GGG + chr2_3:32916081-32916100 None:intergenic 45.0%
!! TTGGCTAGCTTGATTTGGAC+TGG + chr2_3:32916082-32916101 None:intergenic 45.0%
!! CTGGATTGGCTAGCTTGATT+TGG + chr2_3:32916087-32916106 None:intergenic 45.0%
CAAATCAAGCTAGCCAATCC+AGG - chr2_3:32916085-32916104 Msa0288270:intron 45.0%
TGCAAGTGAATGACCTGGAT+TGG + chr2_3:32916101-32916120 None:intergenic 45.0%
TCCAGGTCATTCACTTGCAT+TGG - chr2_3:32916102-32916121 Msa0288270:intron 45.0%
ACCAATGCAAGTGAATGACC+TGG + chr2_3:32916106-32916125 None:intergenic 45.0%
CCCGGTAAGGAAAACTTCTT+TGG + chr2_3:32916962-32916981 None:intergenic 45.0%
!!! CCAGGGCACCATTTTTTTAG+GGG + chr2_3:32917383-32917402 None:intergenic 45.0%
!!! CCCAGGGCACCATTTTTTTA+GGG + chr2_3:32917384-32917403 None:intergenic 45.0%
CCCTAAAAAAATGGTGCCCT+GGG - chr2_3:32917381-32917400 Msa0288270:intron 45.0%
! AGACATGGATTGTTGGCAAG+TGG - chr2_3:32917651-32917670 Msa0288270:intron 45.0%
TATGCGATTGCCAGATGATG+TGG - chr2_3:32917784-32917803 Msa0288270:intron 45.0%
TCATACGCATTCACGTGGTA+AGG - chr2_3:32917898-32917917 Msa0288270:CDS 45.0%
CCAAGGTTCCCTTCATTTAG+GGG + chr2_3:32917996-32918015 None:intergenic 45.0%
GCCGCAACAATTTCAAACCA+AGG + chr2_3:32918013-32918032 None:intergenic 45.0%
GCGACAAGTAGCTCAACTAT+TGG - chr2_3:32918034-32918053 Msa0288270:CDS 45.0%
GTACACAATGGATAGAGGAG+TGG - chr2_3:32918435-32918454 Msa0288270:CDS 45.0%
AGGAGTTGTACACAGTCTTG+AGG - chr2_3:32918477-32918496 Msa0288270:CDS 45.0%
GGAGTTGTACACAGTCTTGA+GGG - chr2_3:32918478-32918497 Msa0288270:CDS 45.0%
TTGTACACAGTCTTGAGGGT+TGG - chr2_3:32918482-32918501 Msa0288270:CDS 45.0%
! GGTCTAAGACCTTTGTCTTC+GGG - chr2_3:32918574-32918593 Msa0288270:intron 45.0%
!!! TTTTTTTTTTACAAAAATTT+TGG + chr2_3:32913080-32913099 None:intergenic 5.0%
!!! TCTTAAAATTATTATTTTTT+AGG + chr2_3:32915257-32915276 None:intergenic 5.0%
!!! GATATTAATTATTTTTATTA+TGG + chr2_3:32915839-32915858 None:intergenic 5.0%
!! AAAATATTAGAATAATTAAA+AGG + chr2_3:32917216-32917235 None:intergenic 5.0%
!!! TTTTTAAATAGTTTTAAAAT+TGG + chr2_3:32918825-32918844 None:intergenic 5.0%
GAGCTCCCATTTCAAAGGAC+TGG + chr2_3:32911262-32911281 None:intergenic 50.0%
TCATGGCCATGGGAGAACTT+TGG - chr2_3:32911290-32911309 Msa0288270:three_prime_UTR 50.0%
CATGGCCATGGGAGAACTTT+GGG - chr2_3:32911291-32911310 Msa0288270:three_prime_UTR 50.0%
!! GAAGGCACCAGCTGAATTTG+AGG + chr2_3:32911500-32911519 None:intergenic 50.0%
! GATTAGCTATGTCGGCGTGT+CGG - chr2_3:32911788-32911807 Msa0288270:intron 50.0%
CACAGATACCGGACACGATA+CGG + chr2_3:32911817-32911836 None:intergenic 50.0%
ACGGATACGGACACAGATAC+CGG + chr2_3:32911828-32911847 None:intergenic 50.0%
CCAGTACCACAGTCAGTAAC+GGG - chr2_3:32912162-32912181 Msa0288270:intron 50.0%
! CACTTACCCGTTACTGACTG+TGG + chr2_3:32912171-32912190 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG + chr2_3:32911835-32911854 None:intergenic 50.0%
!! CTTTTGTTTGCAGCGGGAAC+CGG - chr2_3:32912442-32912461 Msa0288270:CDS 50.0%
ATGCCTCTCTTTGACGCACT+AGG - chr2_3:32912843-32912862 Msa0288270:intron 50.0%
AGACTGACATGCACGAATGC+AGG - chr2_3:32913801-32913820 Msa0288270:intron 50.0%
CGAATGCAGGTGAAGCCTAT+TGG - chr2_3:32913814-32913833 Msa0288270:intron 50.0%
CATCGCTCGGTTTACCATGA+CGG + chr2_3:32914770-32914789 None:intergenic 50.0%
!!! CCCATTTTTTCCAATGGCCG+TGG - chr2_3:32915031-32915050 Msa0288270:CDS 50.0%
AACAAAGCTACCACGGCCAT+TGG + chr2_3:32915044-32915063 None:intergenic 50.0%
CTGAGTTAAGCTCATGGGGA+CGG + chr2_3:32915532-32915551 None:intergenic 50.0%
GACGGATAGATACACGAAGG+AGG + chr2_3:32915940-32915959 None:intergenic 50.0%
! TGGGGGAGGAAAACTTTTCG+TGG - chr2_3:32916852-32916871 Msa0288270:intron 50.0%
TCCAAGCTTAGAAGTAGCCC+CGG + chr2_3:32916980-32916999 None:intergenic 50.0%
CCCCTAAAAAAATGGTGCCC+TGG - chr2_3:32917380-32917399 Msa0288270:intron 50.0%
!!! GCCCAGGGCACCATTTTTTT+AGG + chr2_3:32917385-32917404 None:intergenic 50.0%
ATAAACAGGGGTGGCCCTAT+GGG + chr2_3:32917425-32917444 None:intergenic 50.0%
TATAAACAGGGGTGGCCCTA+TGG + chr2_3:32917426-32917445 None:intergenic 50.0%
ATAGGGCCACCCCTGTTTAT+AGG - chr2_3:32917425-32917444 Msa0288270:intron 50.0%
ACCTCACCTATAAACAGGGG+TGG + chr2_3:32917434-32917453 None:intergenic 50.0%
! TCTTGCAATGCTGTGCTGCT+TGG + chr2_3:32917634-32917653 None:intergenic 50.0%
CAGCACAGCATTGCAAGACA+TGG - chr2_3:32917636-32917655 Msa0288270:intron 50.0%
! GGAGCCCAATTTTGCTCTCT+TGG + chr2_3:32917683-32917702 None:intergenic 50.0%
TGGTGGAAATGAGTTCCACG+TGG + chr2_3:32917704-32917723 None:intergenic 50.0%
CGATTGCCAGATGATGTGGA+AGG - chr2_3:32917788-32917807 Msa0288270:intron 50.0%
CTCAGTCATACGCATTCACG+TGG - chr2_3:32917893-32917912 Msa0288270:CDS 50.0%
AGGTCGCATCCCCTAAATGA+AGG - chr2_3:32917984-32918003 Msa0288270:CDS 50.0%
GGTCGCATCCCCTAAATGAA+GGG - chr2_3:32917985-32918004 Msa0288270:CDS 50.0%
CCCCTAAATGAAGGGAACCT+TGG - chr2_3:32917993-32918012 Msa0288270:CDS 50.0%
CTCTCTCTCTCTCTCTCTCA+AGG - chr2_3:32918227-32918246 Msa0288270:intron 50.0%
TGTGTACAACTCCTCCTGCA+TGG + chr2_3:32918471-32918490 None:intergenic 50.0%
GGTTGGACTCATCACGAAGT+TGG - chr2_3:32918499-32918518 Msa0288270:CDS 50.0%
ACAGTGGAACCCGAAGACAA+AGG + chr2_3:32918586-32918605 None:intergenic 50.0%
ACACGACACGTGTCTGACAC+GGG + chr2_3:32911710-32911729 None:intergenic 55.0%
GACACGACACGTGTCTGACA+CGG + chr2_3:32911711-32911730 None:intergenic 55.0%
! CCCGTTACTGACTGTGGTAC+TGG + chr2_3:32912165-32912184 None:intergenic 55.0%
!! TCGGTGTTGAACACGACACG+TGG + chr2_3:32912300-32912319 None:intergenic 55.0%
GTCAGTGTCCTTGTCGTGTC+TGG - chr2_3:32912377-32912396 Msa0288270:CDS 55.0%
CAGGTGCTCCAAAACCGTAC+CGG + chr2_3:32912464-32912483 None:intergenic 55.0%
CAGGTGAAGCCTATTGGGGT+CGG - chr2_3:32913820-32913839 Msa0288270:intron 55.0%
TGGGGTTATCCGACCCCAAT+AGG + chr2_3:32913832-32913851 None:intergenic 55.0%
CGTCATGGTAAACCGAGCGA+TGG - chr2_3:32914768-32914787 Msa0288270:intron 55.0%
GTTTCAGCTGCTCCATCGCT+CGG + chr2_3:32914783-32914802 None:intergenic 55.0%
! ACATGGGTTGTCCCTAGGTG+TGG - chr2_3:32915131-32915150 Msa0288270:intron 55.0%
TGTCCCTAGGTGTGGCTTTC+AGG - chr2_3:32915139-32915158 Msa0288270:intron 55.0%
CCACCTGAAAGCCACACCTA+GGG + chr2_3:32915145-32915164 None:intergenic 55.0%
! CCTAGGTGTGGCTTTCAGGT+GGG - chr2_3:32915143-32915162 Msa0288270:intron 55.0%
GCTTAGAAGTAGCCCCGGTA+AGG + chr2_3:32916975-32916994 None:intergenic 55.0%
ACCGGGGCTACTTCTAAGCT+TGG - chr2_3:32916976-32916995 Msa0288270:intron 55.0%
GCCACCCCTGTTTATAGGTG+AGG - chr2_3:32917430-32917449 Msa0288270:intron 55.0%
GAGCAAAATTGGGCTCCACG+TGG - chr2_3:32917686-32917705 Msa0288270:intron 55.0%
CCAAGGCCTTCCACATCATC+TGG + chr2_3:32917797-32917816 None:intergenic 55.0%
CCAGATGATGTGGAAGGCCT+TGG - chr2_3:32917794-32917813 Msa0288270:intron 55.0%
TGATCACCTCACAGCAGCCA+AGG + chr2_3:32917814-32917833 None:intergenic 55.0%
CACGACACGTGTCTGACACG+GGG + chr2_3:32911709-32911728 None:intergenic 60.0%
! GTCGGTGTCCGTATCGTGTC+CGG - chr2_3:32911806-32911825 Msa0288270:intron 60.0%
CACGGACACCAGACACGACA+AGG + chr2_3:32912388-32912407 None:intergenic 60.0%
GTTTGCAGCGGGAACCGGTA+CGG - chr2_3:32912447-32912466 Msa0288270:CDS 60.0%
! AGCGGGAACCGGTACGGTTT+TGG - chr2_3:32912453-32912472 Msa0288270:intron 60.0%
CCCTAGGTGTGGCTTTCAGG+TGG - chr2_3:32915142-32915161 Msa0288270:intron 60.0%
CCCACCTGAAAGCCACACCT+AGG + chr2_3:32915146-32915165 None:intergenic 60.0%
GTGGTTCACGCATGCCATGC+AGG - chr2_3:32918454-32918473 Msa0288270:CDS 60.0%
GTTCACGCATGCCATGCAGG+AGG - chr2_3:32918457-32918476 Msa0288270:CDS 60.0%
ACACGACACGTGGCCGACAC+CGG + chr2_3:32912290-32912309 None:intergenic 65.0%
AACAGGGGTGGCCCTATGGG+CGG + chr2_3:32917422-32917441 None:intergenic 65.0%
GGAAGGCCTTGGCTGCTGTG+AGG - chr2_3:32917805-32917824 Msa0288270:intron 65.0%
GACGGGAGGGCGGTAGCCCA+GGG + chr2_3:32917400-32917419 None:intergenic 75.0%
CCTATGGGCGGACGGGAGGG+CGG + chr2_3:32917410-32917429 None:intergenic 75.0%
CGCCCTCCCGTCCGCCCATA+GGG - chr2_3:32917408-32917427 Msa0288270:intron 75.0%
GGCCCTATGGGCGGACGGGA+GGG + chr2_3:32917413-32917432 None:intergenic 75.0%
TGGCCCTATGGGCGGACGGG+AGG + chr2_3:32917414-32917433 None:intergenic 75.0%
GGGTGGCCCTATGGGCGGAC+GGG + chr2_3:32917417-32917436 None:intergenic 75.0%
GGGGTGGCCCTATGGGCGGA+CGG + chr2_3:32917418-32917437 None:intergenic 75.0%
! GGACGGGAGGGCGGTAGCCC+AGG + chr2_3:32917401-32917420 None:intergenic 80.0%
! CCGCCCTCCCGTCCGCCCAT+AGG - chr2_3:32917407-32917426 Msa0288270:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 32911134 32918879 32911134 ID=Msa0288270;Name=Msa0288270
chr2_3 mRNA 32911134 32918879 32911134 ID=Msa0288270-mRNA-1;Parent=Msa0288270;Name=Msa0288270-mRNA-1;_AED=0.12;_eAED=0.12;_QI=158|0.6|0.54|1|1|1|11|261|542
chr2_3 exon 32911134 32911577 32911134 ID=Msa0288270-mRNA-1:exon:10900;Parent=Msa0288270-mRNA-1
chr2_3 exon 32912187 32912471 32912187 ID=Msa0288270-mRNA-1:exon:10899;Parent=Msa0288270-mRNA-1
chr2_3 exon 32912969 32913175 32912969 ID=Msa0288270-mRNA-1:exon:10898;Parent=Msa0288270-mRNA-1
chr2_3 exon 32914567 32914674 32914567 ID=Msa0288270-mRNA-1:exon:10897;Parent=Msa0288270-mRNA-1
chr2_3 exon 32914853 32914898 32914853 ID=Msa0288270-mRNA-1:exon:10896;Parent=Msa0288270-mRNA-1
chr2_3 exon 32914995 32915109 32914995 ID=Msa0288270-mRNA-1:exon:10895;Parent=Msa0288270-mRNA-1
chr2_3 exon 32917098 32917219 32917098 ID=Msa0288270-mRNA-1:exon:10894;Parent=Msa0288270-mRNA-1
chr2_3 exon 32917466 32917558 32917466 ID=Msa0288270-mRNA-1:exon:10893;Parent=Msa0288270-mRNA-1
chr2_3 exon 32917826 32918062 32917826 ID=Msa0288270-mRNA-1:exon:10892;Parent=Msa0288270-mRNA-1
chr2_3 exon 32918355 32918556 32918355 ID=Msa0288270-mRNA-1:exon:10891;Parent=Msa0288270-mRNA-1
chr2_3 exon 32918691 32918879 32918691 ID=Msa0288270-mRNA-1:exon:10890;Parent=Msa0288270-mRNA-1
chr2_3 five_prime_UTR 32918722 32918879 32918722 ID=Msa0288270-mRNA-1:five_prime_utr;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32918691 32918721 32918691 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32918355 32918556 32918355 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32917826 32918062 32917826 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32917466 32917558 32917466 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32917098 32917219 32917098 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32914995 32915109 32914995 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32914853 32914898 32914853 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32914567 32914674 32914567 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32912969 32913175 32912969 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32912187 32912471 32912187 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 CDS 32911395 32911577 32911395 ID=Msa0288270-mRNA-1:cds;Parent=Msa0288270-mRNA-1
chr2_3 three_prime_UTR 32911134 32911394 32911134 ID=Msa0288270-mRNA-1:three_prime_utr;Parent=Msa0288270-mRNA-1
Gene Sequence

>Msa0288270

ATGGCCATGGGAGAACTTTGGGATATTCAAGGAAGAGTAGTGTATGAAATGTTGTATGAAGAAGAGAAAGACCTCAAATTCAGCTGGTGCCTTCATTTGCTCATATTGTCTAGTCTTAGAGGCTTGCTTTATTTGCTATGGAATTGTTACAGCAATATGCTTTTTCTTACACGAAACCGTCAGATTCTTAAACAGGGGGTTGATTTCAAGCAGCTTGACAAAGAATGGGACTGGGATAACTTTTTAATTCTTCAAACAATATTGGCTTCTATGGCGTATTATATGTTTCCATTCCTACAAAATCTTCCATTATGGAACATTAAAGGTGTTATTGCAGCTATGATGTTTCATGTGGGAATCTCAGAACCACTTTATTATTGGGTGCATAAGAAGTTTCATGGACACTATCTTTTCACCAAATACCATTCACTTCACCATTCAATTCCAGTACCACAGTCAGTAACGGGTAACGGGAACCGGTACGGTTTTGGAGCACCTGTTTCTGTCGTTAGTAATTGGAATTCCGATCCTAGGAGCTTCATTGATGGGATATGGATCAACAAATACCACACTCTACACCACACTGAAAAGGACTCTAATTTTTGCCTTTTCATGCCTCTCTTTGACGCACTAGGAAATACGCTTGACACCAAATCATGGGAATTACACAAATCATTCAGTTCAGGAAATTGTAGTAGGGTACCGGAATTTGTTTTCCTGGCCCATATAGTGGATATCACATCCTCTATGCATGCTCAATTCTGTCTCAGAACCTTTGCTTCTCTACCATTCAGAACAAGGGGTAGACTACATCAAACATGGGTTGTCCCTAGGTGTGGCTTTCAGTATTTTTTGCCATTTGCTACTGAGGGGATCAATAAGCATATTGAGCAAGCTATTCTCACCGCTGATAAAATTGGTGTTAAAGTCATCAGCTTGGCTGCTTTGAATAAGAATGAATCTCTAAATGGGGGAGGAAAACTTTTCGTGGATAAACACCCAAACCTAAGAGTTCGAGTTGTTCATGGCAACACTTTAACTGCAGCTGTGATCTTGGATGAAATTCCTAAAGATGCCAAAGAAGTTTTCCTTACCGGGGCTACTTCTAAGCTTGGAAGAGCAATTGCTCTCTACCTCTGCCAAAAGAAAGTCAAAATTCTGATGTTAACACTATCAACGGATAGATTTCAGAAGATTCAAAAGGAAGCACCCGAAGAATACCAAAGTTATCTTGTTCAAGTCACAAAATACCAAGCAGCACAGCATTGCAAGACATGGATTGTTGGCAAGTGGATCACTCCAAGAGAGCAAAATTGGGCTCCACGTGGAACTCATTTCCACCAATTTGTTGTTCCTCCAATTTTTGCATTTAGAAGAGATTGCACTTATGGTGATCTAGCAGCTATGCGATTGCCAGATGATGTGGAAGGCCTTGGCTGCTGTGAGTACACAATGGATAGAGGAGTGGTTCACGCATGCCATGCAGGAGGAGTTGTACACAGTCTTGAGGGTTGGACTCATCACGAAGTTGGAGCTATTGATGTTGAAAGGATCGATGTTGTGTGGAAAGCAGCACTAAAACATGGTCTAAGACCTTTGTCTTCGGGTTCCACTGTCAAAGCAAATTGA

Protein sequence

>Msa0288270

MAMGELWDIQGRVVYEMLYEEEKDLKFSWCLHLLILSSLRGLLYLLWNCYSNMLFLTRNRQILKQGVDFKQLDKEWDWDNFLILQTILASMAYYMFPFLQNLPLWNIKGVIAAMMFHVGISEPLYYWVHKKFHGHYLFTKYHSLHHSIPVPQSVTGNGNRYGFGAPVSVVSNWNSDPRSFIDGIWINKYHTLHHTEKDSNFCLFMPLFDALGNTLDTKSWELHKSFSSGNCSRVPEFVFLAHIVDITSSMHAQFCLRTFASLPFRTRGRLHQTWVVPRCGFQYFLPFATEGINKHIEQAILTADKIGVKVISLAALNKNESLNGGGKLFVDKHPNLRVRVVHGNTLTAAVILDEIPKDAKEVFLTGATSKLGRAIALYLCQKKVKILMLTLSTDRFQKIQKEAPEEYQSYLVQVTKYQAAQHCKTWIVGKWITPREQNWAPRGTHFHQFVVPPIFAFRRDCTYGDLAAMRLPDDVEGLGCCEYTMDRGVVHACHAGGVVHSLEGWTHHEVGAIDVERIDVVWKAALKHGLRPLSSGSTVKAN*