AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1161120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1161120 MtrunA17_Chr7g0255601 91.351 659 11 1 1 659 1 613 0.0 1231
Msa1161120 MtrunA17_Chr7g0255621 69.044 659 150 4 1 659 1 605 0.0 940
Msa1161120 MtrunA17_Chr7g0255611 67.874 635 156 3 1 633 1 589 0.0 913
Msa1161120 MtrunA17_Chr5g0422881 57.679 560 225 4 87 639 34 588 0.0 677
Msa1161120 MtrunA17_Chr4g0005901 43.575 537 291 8 87 620 46 573 4.02e-154 457
Msa1161120 MtrunA17_Chr8g0375291 42.235 528 298 6 87 612 54 576 2.45e-151 450
Msa1161120 MtrunA17_Chr8g0375311 40.449 534 311 6 87 618 54 582 7.18e-149 444
Msa1161120 MtrunA17_Chr7g0241741 41.604 536 303 5 87 620 36 563 1.15e-147 440
Msa1161120 MtrunA17_Chr3g0104011 40.561 535 308 7 87 618 36 563 5.59e-145 433
Msa1161120 MtrunA17_Chr8g0375341 39.179 536 319 6 87 620 54 584 6.76e-143 428
Msa1161120 MtrunA17_Chr5g0415791 41.039 558 314 7 87 636 43 593 2.31e-142 428
Msa1161120 MtrunA17_Chr8g0375351 38.606 531 319 6 87 615 54 579 1.09e-139 420
Msa1161120 MtrunA17_Chr8g0375321 38.764 534 320 6 87 618 51 579 6.77e-137 413
Msa1161120 MtrunA17_Chr5g0399061 38.545 550 325 5 87 630 41 583 4.54e-135 408
Msa1161120 MtrunA17_Chr8g0375331 38.577 534 321 6 87 618 38 566 1.12e-134 407
Msa1161120 MtrunA17_Chr7g0261881 39.564 551 314 7 89 634 43 579 2.16e-130 397
Msa1161120 MtrunA17_Chr8g0375361 39.439 535 317 6 91 623 57 586 2.73e-130 396
Msa1161120 MtrunA17_Chr4g0059991 37.282 574 341 8 87 653 36 597 2.63e-129 394
Msa1161120 MtrunA17_Chr7g0261811 38.007 542 319 7 81 617 37 566 7.76e-129 393
Msa1161120 MtrunA17_Chr5g0399071 37.367 562 334 6 87 645 39 585 3.29e-128 391
Msa1161120 MtrunA17_Chr3g0142101 38.202 534 310 7 88 618 50 566 6.51e-127 387
Msa1161120 MtrunA17_Chr4g0059971 35.000 620 341 11 8 618 18 584 7.44e-127 387
Msa1161120 MtrunA17_Chr8g0390331 38.951 534 312 8 87 615 29 553 4.04e-124 380
Msa1161120 MtrunA17_Chr4g0056431 37.882 557 334 6 89 640 41 590 1.04e-123 379
Msa1161120 MtrunA17_Chr7g0261791 36.989 538 323 5 89 620 45 572 2.97e-122 376
Msa1161120 MtrunA17_Chr7g0261771 36.559 558 329 8 89 638 47 587 1.34e-121 374
Msa1161120 MtrunA17_Chr3g0142091 37.064 545 315 7 88 629 41 560 3.97e-121 372
Msa1161120 MtrunA17_Chr1g0166791 35.599 559 345 7 92 646 43 590 2.17e-120 370
Msa1161120 MtrunA17_Chr1g0187241 38.192 542 306 10 89 618 42 566 3.34e-120 370
Msa1161120 MtrunA17_Chr8g0362781 35.572 551 323 8 87 618 44 581 1.62e-119 368
Msa1161120 MtrunA17_Chr4g0059981 37.523 541 325 8 87 618 45 581 1.70e-119 369
Msa1161120 MtrunA17_Chr2g0331511 34.179 591 353 14 87 652 35 614 6.06e-117 363
Msa1161120 MtrunA17_Chr1g0166771 37.232 513 302 6 90 598 8 504 1.40e-115 357
Msa1161120 MtrunA17_Chr7g0261851 37.291 539 323 5 89 622 44 572 3.26e-115 357
Msa1161120 MtrunA17_Chr1g0166741 36.452 513 306 6 90 598 44 540 5.61e-115 356
Msa1161120 MtrunA17_Chr1g0166711 36.590 563 333 11 89 642 41 588 1.40e-114 355
Msa1161120 MtrunA17_Chr3g0112671 35.091 550 334 7 89 634 49 579 1.08e-112 350
Msa1161120 MtrunA17_Chr3g0114501 36.585 533 326 7 89 618 38 561 1.30e-112 350
Msa1161120 MtrunA17_Chr2g0331471 35.959 584 344 14 87 653 102 672 1.59e-112 353
Msa1161120 MtrunA17_Chr3g0112611 34.897 533 337 5 89 620 48 571 2.62e-112 350
Msa1161120 MtrunA17_Chr2g0331481 35.556 585 345 14 87 653 39 609 5.49e-112 350
Msa1161120 MtrunA17_Chr4g0003761 34.775 555 343 11 87 634 44 586 4.63e-111 347
Msa1161120 MtrunA17_Chr2g0331521 34.982 566 347 11 87 643 36 589 4.70e-111 347
Msa1161120 MtrunA17_Chr5g0439381 36.444 568 335 9 87 650 42 587 3.50e-110 344
Msa1161120 MtrunA17_Chr8g0353031 36.824 573 324 9 74 630 11 561 5.45e-110 343
Msa1161120 MtrunA17_Chr4g0063591 36.754 536 322 9 89 619 38 561 2.98e-109 341
Msa1161120 MtrunA17_Chr4g0014871 36.044 541 316 9 89 625 46 560 3.59e-109 340
Msa1161120 MtrunA17_Chr4g0008651 35.514 535 333 5 87 620 48 571 9.35e-109 340
Msa1161120 MtrunA17_Chr4g0014781 35.359 543 316 9 89 625 45 558 1.99e-107 336
Msa1161120 MtrunA17_Chr7g0240271 33.273 553 358 4 87 633 38 585 2.71e-107 337
Msa1161120 MtrunA17_Chr4g0060001 34.629 566 340 11 87 633 43 597 2.83e-107 337
Msa1161120 MtrunA17_Chr1g0147631 33.495 618 337 11 27 631 25 581 4.09e-107 336
Msa1161120 MtrunA17_Chr3g0133341 35.240 542 323 8 102 638 43 561 2.86e-106 333
Msa1161120 MtrunA17_Chr4g0014801 36.044 541 315 9 89 625 45 558 3.25e-106 333
Msa1161120 MtrunA17_Chr4g0014791 36.059 538 309 11 89 620 45 553 8.64e-106 332
Msa1161120 MtrunA17_Chr7g0214731 34.375 544 339 8 87 618 75 612 1.00e-105 334
Msa1161120 MtrunA17_Chr3g0077151 35.196 537 304 7 89 618 44 543 1.87e-105 330
Msa1161120 MtrunA17_Chr8g0362801 36.983 484 289 9 161 636 1 476 3.16e-105 328
Msa1161120 MtrunA17_Chr7g0240381 33.889 540 337 6 87 624 43 564 9.22e-105 330
Msa1161120 MtrunA17_Chr4g0014841 35.675 541 315 9 89 625 45 556 5.21e-104 327
Msa1161120 MtrunA17_Chr7g0261661 35.897 507 292 9 164 654 4 493 2.15e-103 323
Msa1161120 MtrunA17_Chr5g0400371 33.698 549 352 8 88 631 127 668 9.22e-103 327
Msa1161120 MtrunA17_Chr2g0331461 33.786 589 360 16 87 657 39 615 1.10e-102 326
Msa1161120 MtrunA17_Chr1g0157611 34.296 554 341 12 87 631 30 569 1.02e-101 322
Msa1161120 MtrunA17_Chr1g0157601 33.459 532 332 9 87 609 29 547 1.10e-101 321
Msa1161120 MtrunA17_Chr5g0415841 34.979 466 288 6 161 618 1 459 1.66e-101 318
Msa1161120 MtrunA17_Chr4g0054891 34.146 533 336 9 88 614 125 648 4.29e-99 317
Msa1161120 MtrunA17_Chr8g0362711 34.909 550 328 9 89 622 40 575 7.67e-99 314
Msa1161120 MtrunA17_Chr1g0177591 31.598 557 339 12 74 615 35 564 8.54e-98 311
Msa1161120 MtrunA17_Chr2g0276751 33.081 529 326 8 95 619 60 564 5.95e-97 310
Msa1161120 MtrunA17_Chr7g0240281 31.171 555 369 5 87 633 38 587 7.00e-96 307
Msa1161120 MtrunA17_Chr1g0157621 33.524 525 331 10 95 614 2 513 1.30e-95 305
Msa1161120 MtrunA17_Chr1g0193391 32.198 587 345 14 98 652 39 604 2.69e-95 306
Msa1161120 MtrunA17_Chr2g0284701 33.271 532 342 8 102 621 61 591 8.45e-95 304
Msa1161120 MtrunA17_Chr1g0166731 35.095 473 291 7 160 628 9 469 1.76e-94 300
Msa1161120 MtrunA17_Chr7g0214461 33.271 535 336 10 87 615 92 611 1.78e-94 304
Msa1161120 MtrunA17_Chr1g0213711 31.957 557 359 10 88 641 36 575 5.97e-94 301
Msa1161120 MtrunA17_Chr7g0217461 33.581 539 342 9 88 617 39 570 6.63e-94 301
Msa1161120 MtrunA17_Chr7g0240131 34.607 471 295 6 173 636 13 477 1.23e-93 298
Msa1161120 MtrunA17_Chr7g0235521 34.395 471 296 5 173 636 13 477 1.32e-93 297
Msa1161120 MtrunA17_Chr7g0271221 33.712 528 323 8 98 618 39 546 3.68e-93 300
Msa1161120 MtrunA17_Chr4g0014861 36.219 439 260 7 189 623 11 433 3.99e-93 295
Msa1161120 MtrunA17_Chr7g0240211 33.830 470 300 4 173 636 13 477 4.80e-93 296
Msa1161120 MtrunA17_Chr7g0240181 33.830 470 300 4 173 636 13 477 4.91e-93 296
Msa1161120 MtrunA17_Chr7g0218851 32.609 552 353 10 87 631 60 599 3.87e-91 295
Msa1161120 MtrunA17_Chr5g0415961 31.826 553 348 5 89 625 40 579 5.84e-90 291
Msa1161120 MtrunA17_Chr7g0240151 33.333 468 287 5 173 636 13 459 1.96e-88 283
Msa1161120 MtrunA17_Chr8g0379971 32.240 549 342 10 102 622 49 595 7.88e-86 281
Msa1161120 MtrunA17_Chr1g0177611 32.751 458 277 12 179 629 12 445 1.09e-85 276
Msa1161120 MtrunA17_Chr4g0011471 30.686 554 366 9 70 615 13 556 5.65e-85 278
Msa1161120 MtrunA17_Chr3g0082631 34.685 444 278 7 195 630 31 470 6.79e-84 272
Msa1161120 MtrunA17_Chr8g0379991 32.327 563 334 11 102 621 9 567 1.50e-83 274
Msa1161120 MtrunA17_Chr7g0261751 34.437 453 244 6 89 499 47 488 2.53e-83 272
Msa1161120 MtrunA17_Chr1g0177631 33.333 444 269 10 179 615 12 435 3.99e-83 269
Msa1161120 MtrunA17_Chr4g0011041 30.943 530 342 11 95 612 58 575 3.79e-80 265
Msa1161120 MtrunA17_Chr2g0325951 30.508 531 344 8 94 620 40 549 4.07e-78 259
Msa1161120 MtrunA17_Chr2g0325961 32.270 533 333 9 94 620 40 550 1.08e-77 258
Msa1161120 MtrunA17_Chr2g0326211 31.499 527 336 8 98 620 44 549 1.13e-77 258
Msa1161120 MtrunA17_Chr4g0069581 32.449 490 307 10 134 618 47 517 2.18e-72 244
Msa1161120 MtrunA17_Chr6g0451841 29.779 544 329 11 92 615 24 534 3.81e-72 243
Msa1161120 MtrunA17_Chr7g0261731 36.513 304 182 2 89 389 47 342 1.56e-62 211
Msa1161120 MtrunA17_Chr3g0142111 40.075 267 158 2 88 353 61 326 1.76e-60 206
Msa1161120 MtrunA17_Chr4g0060071 40.726 248 143 3 373 618 53 298 2.31e-53 185
Msa1161120 MtrunA17_Chr3g0142121 35.294 272 162 3 347 618 11 268 1.93e-52 182
Msa1161120 MtrunA17_Chr3g0112631 34.602 289 183 2 346 631 3 288 1.04e-50 177
Msa1161120 MtrunA17_Chr7g0234381 28.194 454 284 10 160 612 3 415 1.34e-46 170
Msa1161120 MtrunA17_Chr7g0234181 27.477 444 278 11 171 612 9 410 1.55e-44 164
Msa1161120 MtrunA17_Chr1g0147591 39.109 202 107 4 201 395 9 201 1.86e-43 155
Msa1161120 MtrunA17_Chr7g0234151 27.093 454 289 10 160 612 3 415 6.68e-43 160
Msa1161120 MtrunA17_Chr7g0261721 36.530 219 131 4 422 638 5 217 1.75e-42 153
Msa1161120 MtrunA17_Chr3g0112651 38.674 181 105 3 160 340 21 195 1.33e-34 130
Msa1161120 MtrunA17_Chr2g0326221 28.750 240 142 4 381 620 15 225 1.81e-23 99.4
Msa1161120 MtrunA17_Chr4g0060061 38.017 121 75 0 184 304 8 128 3.77e-23 95.5
Msa1161120 MtrunA17_Chr7g0261831 30.625 160 100 4 301 458 1 151 8.90e-18 82.8
Msa1161120 MtrunA17_Chr1g0147581 34.746 118 70 3 476 592 5 116 8.09e-14 68.6
Msa1161120 MtrunA17_Chr8g0362791 46.154 65 35 0 87 151 50 114 3.34e-13 67.4
Msa1161120 MtrunA17_Chr1g0166721 37.255 102 53 2 89 184 41 137 2.46e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1161120 AT1G68570.2 56.283 565 237 3 86 642 4 566 0.0 643
Msa1161120 AT1G68570.1 56.206 564 237 3 87 642 35 596 0.0 641
Msa1161120 AT1G62200.1 42.642 530 287 7 87 611 64 581 1.05e-149 446
Msa1161120 AT5G01180.2 41.199 534 305 7 87 618 37 563 3.09e-149 444
Msa1161120 AT5G01180.3 41.199 534 305 7 87 618 37 563 3.09e-149 444
Msa1161120 AT5G01180.1 41.199 534 305 7 87 618 37 563 3.09e-149 444
Msa1161120 AT3G54140.1 40.374 535 309 6 87 618 36 563 3.99e-148 442
Msa1161120 AT3G54140.2 40.374 535 309 6 87 618 36 563 3.99e-148 442
Msa1161120 AT2G02040.1 41.011 534 308 6 87 618 53 581 5.15e-147 439
Msa1161120 AT1G62200.2 40.429 559 287 8 87 611 64 610 4.45e-143 431
Msa1161120 AT1G62200.3 40.429 559 287 8 87 611 78 624 6.46e-143 431
Msa1161120 AT1G69870.1 39.821 560 320 9 87 636 63 615 2.66e-137 416
Msa1161120 AT2G02020.1 37.079 534 294 6 87 620 54 545 1.60e-123 377
Msa1161120 AT1G18880.1 37.011 562 333 11 87 638 31 581 9.70e-122 374
Msa1161120 AT1G52190.1 35.751 579 340 13 87 644 33 600 9.96e-122 375
Msa1161120 AT5G46050.1 36.314 548 337 3 89 634 41 578 1.42e-120 371
Msa1161120 AT3G16180.1 37.106 539 321 9 87 615 35 565 5.10e-120 370
Msa1161120 AT2G26690.2 37.970 532 310 9 89 614 5 522 3.68e-115 356
Msa1161120 AT2G26690.1 37.970 532 310 9 89 614 38 555 1.47e-114 355
Msa1161120 AT5G46040.1 35.649 547 340 3 89 633 41 577 2.07e-114 355
Msa1161120 AT1G12110.1 37.545 554 324 8 89 634 41 580 2.67e-114 355
Msa1161120 AT1G27080.1 37.590 556 318 10 87 632 26 562 3.96e-113 352
Msa1161120 AT2G26690.3 38.050 523 304 9 98 614 2 510 7.42e-113 350
Msa1161120 AT3G54450.1 36.101 554 318 10 89 633 26 552 8.64e-113 350
Msa1161120 AT5G62680.1 35.793 542 334 9 87 618 55 592 3.41e-110 345
Msa1161120 AT2G40460.1 36.697 545 321 10 89 627 38 564 4.43e-110 344
Msa1161120 AT1G27080.2 38.175 537 303 10 106 632 3 520 8.21e-110 342
Msa1161120 AT5G13400.1 35.663 558 331 9 87 631 76 618 8.01e-109 342
Msa1161120 AT2G02020.2 34.831 534 285 7 87 620 54 524 1.72e-108 338
Msa1161120 AT3G47960.1 35.185 540 338 8 87 618 73 608 3.24e-108 341
Msa1161120 AT2G37900.1 35.912 543 315 13 87 620 50 568 6.45e-105 330
Msa1161120 AT3G21670.1 37.593 540 307 9 87 618 41 558 3.73e-104 329
Msa1161120 AT1G33440.1 35.448 536 319 8 92 619 55 571 4.20e-104 329
Msa1161120 AT1G59740.1 33.784 518 326 5 97 609 63 568 6.54e-103 325
Msa1161120 AT1G22540.1 36.296 540 303 10 89 618 44 552 3.16e-101 320
Msa1161120 AT5G46050.2 35.294 476 296 3 161 634 1 466 1.29e-100 316
Msa1161120 AT3G53960.1 34.201 538 335 9 89 620 51 575 1.48e-99 317
Msa1161120 AT1G69850.1 34.301 551 337 7 89 621 39 582 1.16e-98 314
Msa1161120 AT1G32450.1 33.333 564 357 11 98 652 60 613 1.45e-98 315
Msa1161120 AT2G37900.2 36.040 505 290 13 125 620 9 489 1.63e-98 311
Msa1161120 AT5G28470.2 34.470 528 330 9 87 608 29 546 1.60e-97 310
Msa1161120 AT1G27040.3 35.283 547 331 10 84 623 4 534 3.41e-97 309
Msa1161120 AT1G27040.1 35.294 544 329 10 87 623 39 566 5.89e-96 306
Msa1161120 AT1G27040.2 35.294 544 329 10 87 623 35 562 7.50e-96 306
Msa1161120 AT1G72140.1 33.210 542 313 9 89 618 48 552 5.03e-95 304
Msa1161120 AT1G72120.1 34.133 542 323 8 89 623 43 557 7.21e-95 303
Msa1161120 AT5G28470.1 34.280 528 329 10 87 608 29 544 7.37e-95 303
Msa1161120 AT3G45660.1 33.080 526 326 9 95 618 41 542 4.18e-94 301
Msa1161120 AT3G45660.3 33.080 526 326 9 95 618 41 542 4.18e-94 301
Msa1161120 AT3G45660.2 33.080 526 326 9 95 618 62 563 1.42e-93 301
Msa1161120 AT1G72125.1 33.272 541 327 8 89 620 43 558 3.12e-93 299
Msa1161120 AT3G45650.1 32.358 547 338 9 95 640 42 557 3.64e-93 299
Msa1161120 AT1G69860.1 33.271 538 335 9 87 618 30 549 1.02e-89 290
Msa1161120 AT4G21680.1 32.156 538 351 8 88 617 41 572 3.06e-89 290
Msa1161120 AT1G72130.1 32.194 556 323 10 75 618 20 533 3.19e-88 285
Msa1161120 AT1G22550.1 33.150 546 329 9 89 623 44 564 5.92e-88 286
Msa1161120 AT3G45650.2 31.065 573 337 10 95 640 42 583 1.40e-87 285
Msa1161120 AT3G45700.1 31.657 537 335 10 98 633 39 544 3.97e-87 283
Msa1161120 AT5G19640.1 29.730 555 342 12 88 631 72 589 3.67e-85 280
Msa1161120 AT1G22570.1 32.299 548 327 9 71 596 13 538 4.59e-85 278
Msa1161120 AT1G22570.2 33.656 517 312 8 89 596 7 501 7.69e-85 276
Msa1161120 AT3G45710.1 30.612 539 348 10 98 633 44 559 5.67e-83 272
Msa1161120 AT3G45680.1 31.471 537 338 11 98 631 43 552 1.45e-82 271
Msa1161120 AT3G45720.1 30.114 528 341 9 98 622 42 544 3.57e-80 265
Msa1161120 AT5G62730.2 32.969 549 316 8 89 618 11 526 1.85e-79 262
Msa1161120 AT5G62730.1 32.969 549 316 8 89 618 70 585 7.20e-79 262
Msa1161120 AT5G14940.1 29.856 556 338 12 92 625 24 549 2.80e-77 257
Msa1161120 AT3G45690.1 31.169 539 303 13 95 631 38 510 1.50e-76 254
Msa1161120 AT3G01350.1 29.682 566 342 15 92 630 24 560 6.11e-73 246
Msa1161120 AT3G25260.1 30.948 517 307 9 101 615 47 515 7.36e-73 244
Msa1161120 AT1G72130.2 31.448 442 263 8 183 617 6 414 1.34e-71 238
Msa1161120 AT1G72130.3 31.448 442 263 8 183 617 6 414 1.34e-71 238
Msa1161120 AT3G25280.1 29.828 523 317 10 94 612 42 518 6.72e-67 228
Msa1161120 AT2G38100.2 25.379 528 336 13 103 616 2 485 2.84e-40 154
Msa1161120 AT2G38100.1 25.379 528 336 13 103 616 18 501 1.21e-39 153
Msa1161120 AT2G38100.3 25.379 528 336 13 103 616 24 507 1.99e-39 152
Msa1161120 AT5G11570.1 30.350 257 165 6 356 611 229 472 1.15e-36 144
Msa1161120 AT5G11570.1 33.480 227 138 5 87 304 25 247 1.30e-25 111

Find 180 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGCAAAGTTTAACTTAT+TGG 0.106475 7_4:+51284008 Msa1161120:CDS
CTATTGTGGTATAGAAATTT+AGG 0.136477 7_4:-51283035 None:intergenic
TCTAGTTTCACCCCTCTTAT+TGG 0.180358 7_4:+51282099 Msa1161120:CDS
TAATCCCTATTAGTGTATTT+TGG 0.189803 7_4:+51284046 Msa1161120:CDS
CTTGCCATCCTCCAGTAATT+TGG 0.190374 7_4:-51280239 None:intergenic
ACTAACCAAAATACACTAAT+AGG 0.191755 7_4:-51284051 None:intergenic
ACTCATTTGCTGGACGATTT+TGG 0.194548 7_4:+51282136 Msa1161120:CDS
CGAACATTACCTTTCATTCT+TGG 0.208387 7_4:+51278921 Msa1161120:CDS
TCTCCATTTCCCCTCAATTA+TGG 0.215952 7_4:-51278806 None:intergenic
TAATTATTCTGGTACATTAT+TGG 0.219597 7_4:+51284206 Msa1161120:CDS
ACTAAAGATGAATGAAATTA+TGG 0.230010 7_4:+51284498 Msa1161120:exon
CTAGTTTCACCCCTCTTATT+GGG 0.241458 7_4:+51282100 Msa1161120:CDS
TTTCCTTACCAGTATACTTA+TGG 0.243182 7_4:-51284239 None:intergenic
TGGTGGTGCATTTGAATCTT+TGG 0.258756 7_4:-51283608 None:intergenic
GTGGGTTGGGGTTGGGGACT+TGG 0.262461 7_4:+51282858 Msa1161120:CDS
GTACCTCAATATTGTCTTCA+TGG 0.268503 7_4:+51284072 Msa1161120:CDS
AGTCCAATCTACCCCTATTA+AGG 0.271071 7_4:-51284284 None:intergenic
CTAAATTTCTATACCACAAT+AGG 0.279389 7_4:+51283036 Msa1161120:CDS
AGATAATGTGGGTTGGGGTT+GGG 0.283678 7_4:+51282851 Msa1161120:CDS
CTAATAGGGATTATTGCTTT+TGG 0.286585 7_4:-51284036 None:intergenic
TCATTAGAATGCTTCCAATT+TGG 0.288869 7_4:+51283680 Msa1161120:CDS
ACATATTGGCTGGTGCAATT+TGG 0.292349 7_4:-51283798 None:intergenic
CGAGTCAAAGGACTTCCTTC+TGG 0.301697 7_4:-51282954 None:intergenic
CAAAAGACGGTGTAGCTTCT+AGG 0.302522 7_4:+51282748 Msa1161120:CDS
ATAATGTCTTCATCACATTT+AGG 0.303021 7_4:+51283721 Msa1161120:CDS
GCACTACTTCTCATACTTTC+AGG 0.305084 7_4:-51284150 None:intergenic
TTTCATGTCTGTTGGACATT+TGG 0.306594 7_4:+51284107 Msa1161120:CDS
TCGAATTGGTCTGCTGAAAA+AGG 0.311374 7_4:-51282720 None:intergenic
ACAGCCATTGGTAATTATTC+TGG 0.313919 7_4:+51284195 Msa1161120:CDS
TTCCTGATAGAAACCTTAAT+AGG 0.325292 7_4:+51284271 Msa1161120:CDS
CTTTCAGTTCCTCAACTCTA+TGG 0.328527 7_4:-51283654 None:intergenic
CAAGTTAAGTGTTTAAGAAA+TGG 0.329057 7_4:+51284623 Msa1161120:three_prime_UTR
GATAATGTGGGTTGGGGTTG+GGG 0.330286 7_4:+51282852 Msa1161120:CDS
CTATTTGCAGACTCATTTGC+TGG 0.341262 7_4:+51282126 Msa1161120:CDS
AAAATTCCTGATGACCAAAT+TGG 0.341832 7_4:-51283694 None:intergenic
AAGATAATGTGGGTTGGGGT+TGG 0.344337 7_4:+51282850 Msa1161120:CDS
ACCTTCACACACCAAATTAC+TGG 0.350161 7_4:+51280228 Msa1161120:CDS
AGGAAGTCCTTTGACTCGTT+TGG 0.354205 7_4:+51282959 Msa1161120:CDS
TGTTCAAGATAATGTGGGTT+GGG 0.355221 7_4:+51282845 Msa1161120:CDS
ATACTGGTAAGGAAAATAAT+TGG 0.357339 7_4:+51284247 Msa1161120:CDS
AAGGAGCAAGGAAGAAGATT+TGG 0.362257 7_4:+51284407 Msa1161120:CDS
TGTGTGAAGGTTATCTGATA+TGG 0.372202 7_4:-51280216 None:intergenic
AGATAATGTCTACAATTTCA+TGG 0.375257 7_4:+51280271 Msa1161120:CDS
CCCCTATTAAGGTTTCTATC+AGG 0.376012 7_4:-51284273 None:intergenic
CTTTCACAAATTTCTCCAAC+TGG 0.378860 7_4:-51284387 None:intergenic
TCCTGATAGAAACCTTAATA+GGG 0.380862 7_4:+51284272 Msa1161120:CDS
TACTATTATTATCTTATTAG+TGG 0.385216 7_4:+51284306 Msa1161120:CDS
GATGCTGCTATTTCTTTAGA+AGG 0.386341 7_4:+51283065 Msa1161120:CDS
TATCCATAATTGAGGGGAAA+TGG 0.387145 7_4:+51278803 Msa1161120:exon
AATCACATGTTTACAAAGAA+TGG 0.387932 7_4:+51283915 Msa1161120:CDS
TATTGTGGTATAGAAATTTA+GGG 0.389252 7_4:-51283034 None:intergenic
ATGCTTCCAATTTGGTCATC+AGG 0.392128 7_4:+51283688 Msa1161120:CDS
CCAATGGCATATTCAACTCT+TGG 0.394025 7_4:-51282038 None:intergenic
TCAATAGTCCATAAGTATAC+TGG 0.394150 7_4:+51284231 Msa1161120:CDS
TCTCTCCTCCTCACATCTCT+TGG 0.395143 7_4:+51282669 Msa1161120:CDS
GTGACTAAATTCCAAAGGTT+TGG 0.396383 7_4:-51283628 None:intergenic
CAAATGCACCACCAAACCTT+TGG 0.399670 7_4:+51283617 Msa1161120:CDS
TCTTTGCAATTTACTTGTGT+TGG 0.402410 7_4:-51282612 None:intergenic
ATCAGTAATTTCATTTGTGT+TGG 0.404178 7_4:+51282905 Msa1161120:CDS
GCATATTCAACTCTTGGGTT+AGG 0.409554 7_4:-51282032 None:intergenic
TCAGTAATTTCATTTGTGTT+GGG 0.412162 7_4:+51282906 Msa1161120:CDS
GCAAATAGTGCCCCAATAAG+AGG 0.412943 7_4:-51282111 None:intergenic
CTCCTCACATCTCTTGGATC+AGG 0.413530 7_4:+51282675 Msa1161120:CDS
TAAACACTTAACTTGCATAT+AGG 0.414488 7_4:-51284615 None:intergenic
AAACCTTAATAGGGGTAGAT+TGG 0.426189 7_4:+51284281 Msa1161120:CDS
ACGGTGTAGCTTCTAGGAAA+TGG 0.429534 7_4:+51282754 Msa1161120:CDS
CAGGATTCTTTGTCAATCTA+CGG 0.434972 7_4:-51283888 None:intergenic
TCAAATACACTCACAAACTT+TGG 0.437207 7_4:+51282069 Msa1161120:CDS
CTAACCAAAATACACTAATA+GGG 0.437307 7_4:-51284050 None:intergenic
TGTGATAGATTTGCGGGTGC+TGG 0.439196 7_4:+51281985 Msa1161120:CDS
TTGTCAATCTACGGGCGAAT+GGG 0.442904 7_4:-51283879 None:intergenic
TAGCTGCTTTGTGATATAGT+TGG 0.449839 7_4:-51278718 None:intergenic
AATACACTCACAAACTTTGG+TGG 0.458410 7_4:+51282072 Msa1161120:CDS
GAAGTATGTGATAGATTTGC+GGG 0.458461 7_4:+51281979 Msa1161120:CDS
TATAGAAATTTAGGGTCATC+AGG 0.458743 7_4:-51283026 None:intergenic
GTAAGGAGGAAGAGAAGAAA+GGG 0.461214 7_4:+51284472 Msa1161120:CDS
CAAGAATGAAAGGTAATGTT+CGG 0.463265 7_4:-51278920 None:intergenic
ATCACATGTTTACAAAGAAT+GGG 0.464280 7_4:+51283916 Msa1161120:CDS
GGAAATGGAACCTCTTCAAT+TGG 0.466896 7_4:+51282769 Msa1161120:CDS
TGAGAATTTAAAAGATGGTA+AGG 0.467146 7_4:+51284455 Msa1161120:CDS
AGCACACCACGTTTGATTGT+GGG 0.471873 7_4:+51280306 Msa1161120:CDS
CAATGGCATATTCAACTCTT+GGG 0.481738 7_4:-51282037 None:intergenic
TCTAAGTGCTTTGACCATTG+TGG 0.482643 7_4:+51282818 Msa1161120:CDS
TGTAAACATGTGATTCCAGC+AGG 0.482828 7_4:-51283907 None:intergenic
GATTAAGAACAACATGGAAA+TGG 0.486644 7_4:+51278839 Msa1161120:CDS
TCGTTTGGCTCAAGTGGTTG+TGG 0.487298 7_4:+51282974 Msa1161120:CDS
GGTGTCCTAACCATGATGAT+AGG 0.490141 7_4:+51283829 Msa1161120:CDS
GGTAAGGAGGAAGAGAAGAA+AGG 0.495136 7_4:+51284471 Msa1161120:CDS
TTTATTATATAGTATGTGCT+TGG 0.496757 7_4:+51284349 Msa1161120:CDS
TCAATTGAGAATTTAAAAGA+TGG 0.496798 7_4:+51284450 Msa1161120:CDS
TAAATTTCTATACCACAATA+GGG 0.499116 7_4:+51283037 Msa1161120:CDS
TTTGACTCGTTTGGCTCAAG+TGG 0.500378 7_4:+51282968 Msa1161120:CDS
TATTGCATAACTACAGCCAT+TGG 0.501353 7_4:+51284183 Msa1161120:CDS
AAAGCAGCTAAGGATATAGT+TGG 0.503783 7_4:+51278731 Msa1161120:five_prime_UTR
TAACTCCTATCATCATGGTT+AGG 0.504069 7_4:-51283834 None:intergenic
ACTAAATTCCAAAGGTTTGG+TGG 0.504371 7_4:-51283625 None:intergenic
CAATTTACTTGTGTTGGACA+TGG 0.509664 7_4:-51282606 None:intergenic
AAGAATGGGAGTAGGGTTTG+TGG 0.510214 7_4:+51283930 Msa1161120:CDS
GGATATAGTTGGAGGAGTAG+TGG 0.511886 7_4:+51278742 Msa1161120:five_prime_UTR
CATTCAACAAGCTCGTTCCA+TGG 0.514524 7_4:+51283753 Msa1161120:CDS
GGTTTCACAGTCTTATACAA+TGG 0.515078 7_4:-51282933 None:intergenic
GGTTTATGTTCAAGATAATG+TGG 0.515822 7_4:+51282839 Msa1161120:CDS
CTCACATCTCTTGGATCAGG+TGG 0.515826 7_4:+51282678 Msa1161120:CDS
GGGGAAATGGAGATAGAGAA+GGG 0.516102 7_4:+51278816 Msa1161120:exon
TAGTTTCACCCCTCTTATTG+GGG 0.516183 7_4:+51282101 Msa1161120:CDS
ACCACGTTTGATTGTGGGAG+CGG 0.518497 7_4:+51280311 Msa1161120:CDS
TTTGTCAATCTACGGGCGAA+TGG 0.518546 7_4:-51283880 None:intergenic
TGTTTACAAAGAATGGGAGT+AGG 0.518849 7_4:+51283922 Msa1161120:CDS
GAGCACACCACGTTTGATTG+TGG 0.519215 7_4:+51280305 Msa1161120:CDS
AGAAATTTGTGAAAGGAGCA+AGG 0.519820 7_4:+51284395 Msa1161120:CDS
GTGTCAAGTATCCATAATTG+AGG 0.522529 7_4:+51278795 Msa1161120:five_prime_UTR
TTATTCAGTATAAATAAGCT+TGG 0.522726 7_4:+51284532 Msa1161120:three_prime_UTR
TGGATGCCTCATCTATGAAC+TGG 0.522988 7_4:+51282170 Msa1161120:CDS
GTTTACAAAGAATGGGAGTA+GGG 0.523303 7_4:+51283923 Msa1161120:CDS
ATGAGTGAGGTGACGGTCCA+TGG 0.523377 7_4:-51283770 None:intergenic
AGGATTCTTTGTCAATCTAC+GGG 0.526774 7_4:-51283887 None:intergenic
GTTCAAGATAATGTGGGTTG+GGG 0.531669 7_4:+51282846 Msa1161120:CDS
ACTATATCACAAAGCAGCTA+AGG 0.533027 7_4:+51278721 Msa1161120:five_prime_UTR
AGATTGACAAAGAATCCTGC+TGG 0.535346 7_4:+51283892 Msa1161120:CDS
CAAATAGTGCCCCAATAAGA+GGG 0.538046 7_4:-51282110 None:intergenic
TGCAATTGTCACAGAAGAAG+AGG 0.538516 7_4:+51283585 Msa1161120:CDS
TCCAGTAATTTGGTGTGTGA+AGG 0.538564 7_4:-51280229 None:intergenic
ATGTTCAAGATAATGTGGGT+TGG 0.540055 7_4:+51282844 Msa1161120:CDS
GTGTGAAGGTTATCTGATAT+GGG 0.540748 7_4:-51280215 None:intergenic
AGGAGGAGAGACATGTAGAG+TGG 0.542237 7_4:-51282657 None:intergenic
AGTCCATAAGTATACTGGTA+AGG 0.542351 7_4:+51284236 Msa1161120:CDS
TACTATAGTTTCAGCACTAG+TGG 0.543378 7_4:+51283966 Msa1161120:CDS
AGGGGAAATGGAGATAGAGA+AGG 0.543654 7_4:+51278815 Msa1161120:exon
CTACAATTTCATGGATGAGA+TGG 0.546564 7_4:+51280280 Msa1161120:CDS
TACTGATATCATCATAGCAA+TGG 0.559124 7_4:-51282889 None:intergenic
GTTTATGTTCAAGATAATGT+GGG 0.559891 7_4:+51282840 Msa1161120:CDS
TGTCAAGTATCCATAATTGA+GGG 0.564082 7_4:+51278796 Msa1161120:five_prime_UTR
CCAAGAGTTGAATATGCCAT+TGG 0.564090 7_4:+51282038 Msa1161120:CDS
ATGGTGTCTCTGTAGATGGT+TGG 0.565518 7_4:+51283555 Msa1161120:intron
CAGCATCAAGCTCCCTATTG+TGG 0.571568 7_4:-51283049 None:intergenic
ATAAGCTCACCAAGAATGAA+AGG 0.574734 7_4:-51278930 None:intergenic
ACTTGAGCCAAACGAGTCAA+AGG 0.576768 7_4:-51282966 None:intergenic
TCAATATTGTCTTCATGGTG+TGG 0.578068 7_4:+51284077 Msa1161120:CDS
TAGCATAACTCCTATCATCA+TGG 0.578336 7_4:-51283839 None:intergenic
GAATTTAAAAGATGGTAAGG+AGG 0.578564 7_4:+51284458 Msa1161120:CDS
GCAGCTAAGGATATAGTTGG+AGG 0.578777 7_4:+51278734 Msa1161120:five_prime_UTR
ACTTGTGTTGGACATGGTGG+AGG 0.589071 7_4:-51282600 None:intergenic
TATAAGACTGTGAAACCAGA+AGG 0.591034 7_4:+51282939 Msa1161120:CDS
GTATTTGAAGCTGCTACCAA+TGG 0.593986 7_4:-51282054 None:intergenic
CACACCAAATTACTGGAGGA+TGG 0.594656 7_4:+51280235 Msa1161120:CDS
TGAAGTATGTGATAGATTTG+CGG 0.597441 7_4:+51281978 Msa1161120:CDS
TTCGGATTCCTCCTCGACGA+GGG 0.600657 7_4:-51278902 None:intergenic
TGATATCATCATAGCAATGG+TGG 0.601176 7_4:-51282886 None:intergenic
AGTCACTGTCCATAGAGTTG+AGG 0.603057 7_4:+51283645 Msa1161120:CDS
TTGTGGCTGCTGTAAAGAAA+AGG 0.603529 7_4:+51282991 Msa1161120:CDS
TTTACTTGTGTTGGACATGG+TGG 0.604763 7_4:-51282603 None:intergenic
CAGTTGGAGAAATTTGTGAA+AGG 0.610712 7_4:+51284388 Msa1161120:CDS
GATATCATCATAGCAATGGT+GGG 0.612000 7_4:-51282885 None:intergenic
GGGAAATGGAGATAGAGAAG+GGG 0.613335 7_4:+51278817 Msa1161120:exon
TGTACCAGAATAATTACCAA+TGG 0.618339 7_4:-51284199 None:intergenic
GGACAGTGACTAAATTCCAA+AGG 0.619266 7_4:-51283633 None:intergenic
GTTCGGATTCCTCCTCGACG+AGG 0.621335 7_4:-51278903 None:intergenic
GATGAGGCATCCAACAGTGA+TGG 0.621946 7_4:-51282160 None:intergenic
CATGGTGGAGGACGGAAATG+TGG 0.624093 7_4:-51282588 None:intergenic
AAGATACCAGTTCATAGATG+AGG 0.629019 7_4:-51282176 None:intergenic
CAATTCGACATGACAAAAGA+CGG 0.629390 7_4:+51282735 Msa1161120:CDS
GGATTCCTCCTCGACGAGGG+TGG 0.631583 7_4:-51278899 None:intergenic
TGGTAATAATTGTGAAGATG+TGG 0.642448 7_4:-51282637 None:intergenic
ACACCATGAAGACAATATTG+AGG 0.645065 7_4:-51284075 None:intergenic
GTCAAGTATCCATAATTGAG+GGG 0.645544 7_4:+51278797 Msa1161120:five_prime_UTR
CCTGATAGAAACCTTAATAG+GGG 0.645840 7_4:+51284273 Msa1161120:CDS
ATGAACCACCCTCGTCGAGG+AGG 0.650471 7_4:+51278894 Msa1161120:CDS
CTGATCCAAGAGATGTGAGG+AGG 0.658930 7_4:-51282674 None:intergenic
CAATTTGGAATGAATGAGTG+AGG 0.672708 7_4:-51283783 None:intergenic
TTCACACACCAAATTACTGG+AGG 0.677788 7_4:+51280231 Msa1161120:CDS
AAAATGAACCACCCTCGTCG+AGG 0.680557 7_4:+51278891 Msa1161120:CDS
GGCTGCTGTAAAGAAAAGGA+AGG 0.682734 7_4:+51282995 Msa1161120:CDS
GAAGGGGATTAAGAACAACA+TGG 0.682949 7_4:+51278833 Msa1161120:CDS
GGAATGAATGAGTGAGGTGA+CGG 0.687689 7_4:-51283777 None:intergenic
ATCTTGAACATAAACCACAA+TGG 0.694455 7_4:-51282832 None:intergenic
GTGTTGGACATGGTGGAGGA+CGG 0.704709 7_4:-51282596 None:intergenic
CACCTGATCCAAGAGATGTG+AGG 0.705444 7_4:-51282677 None:intergenic
AAATAGTGCCCCAATAAGAG+GGG 0.714886 7_4:-51282109 None:intergenic
ACCGCTCCCACAATCAAACG+TGG 0.729110 7_4:-51280312 None:intergenic
AGATGAATGAAATTATGGTG+CGG 0.756410 7_4:+51284503 Msa1161120:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATTGTTAAAATCAA+TGG + chr7_4:51279284-51279303 Msa1161120:intron 10.0%
!! TTTATAGTAAAAATTGAAAA+GGG - chr7_4:51279975-51279994 None:intergenic 10.0%
!! ATTTATAGTAAAAATTGAAA+AGG - chr7_4:51279976-51279995 None:intergenic 10.0%
!! ATATCATTTAATATATTCAA+CGG - chr7_4:51280433-51280452 None:intergenic 10.0%
!! TATATTAAATGATATATCTA+TGG + chr7_4:51280438-51280457 Msa1161120:intron 10.0%
!! AAATTATTTATTACATTAGT+GGG - chr7_4:51282450-51282469 None:intergenic 10.0%
!!! TTTTTATTAAAACTAAAAGG+AGG + chr7_4:51279107-51279126 Msa1161120:intron 15.0%
!! AGTACTTAAAATATACTATA+TGG - chr7_4:51279232-51279251 None:intergenic 15.0%
!!! ACAATTTATTTTTTATAAGC+AGG - chr7_4:51279262-51279281 None:intergenic 15.0%
!! TTATAGTAAAAATTGAAAAG+GGG - chr7_4:51279974-51279993 None:intergenic 15.0%
!! TAACATCAATATAATACTAT+CGG - chr7_4:51280122-51280141 None:intergenic 15.0%
!!! TTGAGATTTTTTAATAAAAG+TGG + chr7_4:51280334-51280353 Msa1161120:intron 15.0%
!!! AAAAAATCTAATTTTTTGGA+TGG - chr7_4:51281458-51281477 None:intergenic 15.0%
!!! GTTGAAAAAATCTAATTTTT+TGG - chr7_4:51281462-51281481 None:intergenic 15.0%
!!! AAAATTAGATTTTTTCAACA+AGG + chr7_4:51281463-51281482 Msa1161120:intron 15.0%
!!! AAAAAAATTATCTACACTTT+TGG - chr7_4:51281605-51281624 None:intergenic 15.0%
!! AAAAAGTTTGGATATTTATA+TGG + chr7_4:51281669-51281688 Msa1161120:intron 15.0%
!!! GATTTTTAAATCCAAATAAA+TGG + chr7_4:51282364-51282383 Msa1161120:intron 15.0%
!! CAAATTATTTATTACATTAG+TGG - chr7_4:51282451-51282470 None:intergenic 15.0%
!! AAGAATTCAAATTTGAATAA+AGG + chr7_4:51283349-51283368 Msa1161120:intron 15.0%
!! AGAATTCAAATTTGAATAAA+GGG + chr7_4:51283350-51283369 Msa1161120:intron 15.0%
!!! CTTATTTTATTTGAATGAAT+AGG + chr7_4:51283395-51283414 Msa1161120:intron 15.0%
!! TACTATTATTATCTTATTAG+TGG + chr7_4:51284306-51284325 Msa1161120:CDS 15.0%
!! TATAGAATATACACAATTCT+TGG + chr7_4:51279446-51279465 Msa1161120:intron 20.0%
!!! TTTTTTTGAGACATAAAACT+TGG - chr7_4:51279709-51279728 None:intergenic 20.0%
!! AGAACAATATCATTAAAAGA+AGG + chr7_4:51279739-51279758 Msa1161120:intron 20.0%
!! CAATCACACTAATTTATAAA+GGG - chr7_4:51280058-51280077 None:intergenic 20.0%
!! TCAATCACACTAATTTATAA+AGG - chr7_4:51280059-51280078 None:intergenic 20.0%
!! CAAAAAGAAAAATAAGTGAA+GGG + chr7_4:51280545-51280564 Msa1161120:intron 20.0%
!!! CAAACCACTATTTTTTTTTT+GGG - chr7_4:51280886-51280905 None:intergenic 20.0%
!! TTTAATAAATGTATACGTGT+AGG - chr7_4:51281095-51281114 None:intergenic 20.0%
!! TTAATTCTGCAATATATGAA+TGG + chr7_4:51281134-51281153 Msa1161120:intron 20.0%
!! ACATTCATTCAAAAATTTGA+AGG + chr7_4:51281544-51281563 Msa1161120:intron 20.0%
!! CATTCATTCAAAAATTTGAA+GGG + chr7_4:51281545-51281564 Msa1161120:intron 20.0%
!!! AGTGTAGATAATTTTTTTTG+TGG + chr7_4:51281607-51281626 Msa1161120:intron 20.0%
!!! AAAAGTCGGAATTTTTTTTT+AGG + chr7_4:51281635-51281654 Msa1161120:intron 20.0%
!! GAAAACTAAAACAAAAAGTT+TGG + chr7_4:51281657-51281676 Msa1161120:intron 20.0%
!! GAAACTTAATCAAACAAATA+AGG - chr7_4:51281713-51281732 None:intergenic 20.0%
!!! TTAAAATGGTTTTTGATCTT+AGG - chr7_4:51282268-51282287 None:intergenic 20.0%
!!! GTTTGACTTTATAACTTAAA+AGG + chr7_4:51282406-51282425 Msa1161120:intron 20.0%
!! TATTGTGGTATAGAAATTTA+GGG - chr7_4:51283037-51283056 None:intergenic 20.0%
!! TAAATTTCTATACCACAATA+GGG + chr7_4:51283037-51283056 Msa1161120:CDS 20.0%
!!! GATTTTTAACTCATAAAATC+AGG + chr7_4:51283223-51283242 Msa1161120:intron 20.0%
!! GAATTCAAATTTGAATAAAG+GGG + chr7_4:51283351-51283370 Msa1161120:intron 20.0%
!! TATATTCCTTAATTCATCTA+TGG + chr7_4:51283536-51283555 Msa1161120:intron 20.0%
!! TAATTATTCTGGTACATTAT+TGG + chr7_4:51284206-51284225 Msa1161120:CDS 20.0%
!! TTTATTATATAGTATGTGCT+TGG + chr7_4:51284349-51284368 Msa1161120:CDS 20.0%
!! TCAATTGAGAATTTAAAAGA+TGG + chr7_4:51284450-51284469 Msa1161120:CDS 20.0%
!! ACTAAAGATGAATGAAATTA+TGG + chr7_4:51284498-51284517 Msa1161120:exon 20.0%
!! TTATTCAGTATAAATAAGCT+TGG + chr7_4:51284532-51284551 Msa1161120:three_prime_UTR 20.0%
! AAAATATACTATATGGCATG+AGG - chr7_4:51279225-51279244 None:intergenic 25.0%
!! GAATGTATTAGAATTAGTCT+TGG - chr7_4:51279339-51279358 None:intergenic 25.0%
!! GGAGCATTTGATAAATATAA+CGG - chr7_4:51279688-51279707 None:intergenic 25.0%
!! AGCTTAAATATTTTCAGATC+TGG + chr7_4:51279923-51279942 Msa1161120:intron 25.0%
! ATCATACAAATTTAAGAGAG+CGG - chr7_4:51280024-51280043 None:intergenic 25.0%
! AGCTTATGAAAAATCTTACA+AGG + chr7_4:51280082-51280101 Msa1161120:intron 25.0%
! AGATAATGTCTACAATTTCA+TGG + chr7_4:51280271-51280290 Msa1161120:CDS 25.0%
! GCAAAAAGAAAAATAAGTGA+AGG + chr7_4:51280544-51280563 Msa1161120:intron 25.0%
! GAAAGAATGAAAAAAGTGAA+GGG + chr7_4:51280673-51280692 Msa1161120:intron 25.0%
! ACTATGTCGATACATATATA+TGG - chr7_4:51280752-51280771 None:intergenic 25.0%
! TATCCACAGAAATTAAAGAA+TGG + chr7_4:51280849-51280868 Msa1161120:intron 25.0%
!! AAACCATTCTTTAATTTCTG+TGG - chr7_4:51280855-51280874 None:intergenic 25.0%
! ACAGAAATTAAAGAATGGTT+TGG + chr7_4:51280854-51280873 Msa1161120:intron 25.0%
!!! CCAAACCACTATTTTTTTTT+TGG - chr7_4:51280887-51280906 None:intergenic 25.0%
! CCAAAAAAAAAATAGTGGTT+TGG + chr7_4:51280884-51280903 Msa1161120:intron 25.0%
! TGTGACATTGATGAATTTAA+CGG + chr7_4:51280948-51280967 Msa1161120:intron 25.0%
!!! TGATGAATTTAACGGATTAA+TGG + chr7_4:51280956-51280975 Msa1161120:intron 25.0%
! GACAAAAACAATAAAATCGA+TGG - chr7_4:51281267-51281286 None:intergenic 25.0%
! TTAAAAGCAGGAACTAAAAA+TGG - chr7_4:51281367-51281386 None:intergenic 25.0%
! ACAGTATACTACAATTAAAG+TGG - chr7_4:51281885-51281904 None:intergenic 25.0%
!! TTTAAAATATGAGAGAGAGA+GGG - chr7_4:51282203-51282222 None:intergenic 25.0%
!! ATTTAAAATATGAGAGAGAG+AGG - chr7_4:51282204-51282223 None:intergenic 25.0%
! GGACTTTGATTCATTTAAAA+TGG - chr7_4:51282282-51282301 None:intergenic 25.0%
! AGAAAATGACATTCTTAGTT+TGG - chr7_4:51282303-51282322 None:intergenic 25.0%
!!! ATGTTATTTTGCTTGAAACA+GGG + chr7_4:51282534-51282553 Msa1161120:intron 25.0%
!!! AATTGGTACTTTTTCATCAT+GGG + chr7_4:51282786-51282805 Msa1161120:CDS 25.0%
! GTTTATGTTCAAGATAATGT+GGG + chr7_4:51282840-51282859 Msa1161120:CDS 25.0%
! ATCAGTAATTTCATTTGTGT+TGG + chr7_4:51282905-51282924 Msa1161120:CDS 25.0%
! TCAGTAATTTCATTTGTGTT+GGG + chr7_4:51282906-51282925 Msa1161120:CDS 25.0%
! CTATTGTGGTATAGAAATTT+AGG - chr7_4:51283038-51283057 None:intergenic 25.0%
! CTAAATTTCTATACCACAAT+AGG + chr7_4:51283036-51283055 Msa1161120:CDS 25.0%
! ATAATGTCTTCATCACATTT+AGG + chr7_4:51283721-51283740 Msa1161120:CDS 25.0%
! AATCACATGTTTACAAAGAA+TGG + chr7_4:51283915-51283934 Msa1161120:CDS 25.0%
! ATCACATGTTTACAAAGAAT+GGG + chr7_4:51283916-51283935 Msa1161120:CDS 25.0%
!! TAATCCCTATTAGTGTATTT+TGG + chr7_4:51284046-51284065 Msa1161120:CDS 25.0%
! CTAACCAAAATACACTAATA+GGG - chr7_4:51284053-51284072 None:intergenic 25.0%
! ACTAACCAAAATACACTAAT+AGG - chr7_4:51284054-51284073 None:intergenic 25.0%
! ATACTGGTAAGGAAAATAAT+TGG + chr7_4:51284247-51284266 Msa1161120:CDS 25.0%
! TGAGAATTTAAAAGATGGTA+AGG + chr7_4:51284455-51284474 Msa1161120:CDS 25.0%
!!! TAAACACTTAACTTGCATAT+AGG - chr7_4:51284618-51284637 None:intergenic 25.0%
! CAAGTTAAGTGTTTAAGAAA+TGG + chr7_4:51284623-51284642 Msa1161120:three_prime_UTR 25.0%
TGTCAAGTATCCATAATTGA+GGG + chr7_4:51278796-51278815 Msa1161120:five_prime_UTR 30.0%
GATTAAGAACAACATGGAAA+TGG + chr7_4:51278839-51278858 Msa1161120:CDS 30.0%
CAAGAATGAAAGGTAATGTT+CGG - chr7_4:51278923-51278942 None:intergenic 30.0%
! ACAAAAAGCATGAATGAGAA+GGG - chr7_4:51279039-51279058 None:intergenic 30.0%
! AACAAAAAGCATGAATGAGA+AGG - chr7_4:51279040-51279059 None:intergenic 30.0%
AAGCGCACAAATTAATTACA+AGG + chr7_4:51279197-51279216 Msa1161120:intron 30.0%
!!! GAGTTTTAACTTGCATATCA+TGG + chr7_4:51279306-51279325 Msa1161120:intron 30.0%
!!! GAAAATGAGTTTTGGTAATG+TGG - chr7_4:51279504-51279523 None:intergenic 30.0%
TTTCTCGGTTGTGAAATAAA+TGG + chr7_4:51279604-51279623 Msa1161120:intron 30.0%
TTCTCGGTTGTGAAATAAAT+GGG + chr7_4:51279605-51279624 Msa1161120:intron 30.0%
AAATATAACGGTGGAGATTT+AGG - chr7_4:51279676-51279695 None:intergenic 30.0%
GCATTTGATAAATATAACGG+TGG - chr7_4:51279685-51279704 None:intergenic 30.0%
CTGAAAATATTTAAGCTTCG+AGG - chr7_4:51279920-51279939 None:intergenic 30.0%
!!! ATTTATAAAGGGACTGGTTT+TGG - chr7_4:51280047-51280066 None:intergenic 30.0%
ACACTAATTTATAAAGGGAC+TGG - chr7_4:51280053-51280072 None:intergenic 30.0%
!!! TTAGTTTTGTTTGTGTTCAG+TGG + chr7_4:51280156-51280175 Msa1161120:intron 30.0%
!!! TAGTTTTGTTTGTGTTCAGT+GGG + chr7_4:51280157-51280176 Msa1161120:intron 30.0%
!!! CAGTGGGATTTTTTATCATT+AGG + chr7_4:51280173-51280192 Msa1161120:intron 30.0%
!!! CTAGTAACTTTTTGAGATTC+AGG - chr7_4:51280386-51280405 None:intergenic 30.0%
AATCTCAAAAAGTTACTAGC+AGG + chr7_4:51280387-51280406 Msa1161120:intron 30.0%
TAACATTAACTTTCCCATCA+TGG + chr7_4:51280464-51280483 Msa1161120:intron 30.0%
AACATTAACTTTCCCATCAT+GGG + chr7_4:51280465-51280484 Msa1161120:intron 30.0%
TAACTCTCTAATTCATAGGA+GGG - chr7_4:51280522-51280541 None:intergenic 30.0%
TTAACTCTCTAATTCATAGG+AGG - chr7_4:51280523-51280542 None:intergenic 30.0%
CGAAAGAATGAAAAAAGTGA+AGG + chr7_4:51280672-51280691 Msa1161120:intron 30.0%
!!! CCACTATTTTTTTTTTGGGT+AGG - chr7_4:51280882-51280901 None:intergenic 30.0%
CCTACCCAAAAAAAAAATAG+TGG + chr7_4:51280879-51280898 Msa1161120:intron 30.0%
!!! TACGTGTAGGAGTTTTATTT+AGG - chr7_4:51281082-51281101 None:intergenic 30.0%
! TTTTTGTGGCAACAAAAAGT+CGG + chr7_4:51281621-51281640 Msa1161120:intron 30.0%
TGAAGTATGTGATAGATTTG+CGG + chr7_4:51281978-51281997 Msa1161120:CDS 30.0%
TCAAATACACTCACAAACTT+TGG + chr7_4:51282069-51282088 Msa1161120:CDS 30.0%
CCAAATAAATGGTTTCAGAT+CGG + chr7_4:51282375-51282394 Msa1161120:intron 30.0%
! TTTATTACATTAGTGGGTCT+GGG - chr7_4:51282444-51282463 None:intergenic 30.0%
! ATTTATTACATTAGTGGGTC+TGG - chr7_4:51282445-51282464 None:intergenic 30.0%
CTGTTTCAAGCAAAATAACA+TGG - chr7_4:51282535-51282554 None:intergenic 30.0%
!!! CATGTTATTTTGCTTGAAAC+AGG + chr7_4:51282533-51282552 Msa1161120:intron 30.0%
TCTTTGCAATTTACTTGTGT+TGG - chr7_4:51282615-51282634 None:intergenic 30.0%
TGGTAATAATTGTGAAGATG+TGG - chr7_4:51282640-51282659 None:intergenic 30.0%
!! TGAAAAAGTACCAATTGAAG+AGG - chr7_4:51282782-51282801 None:intergenic 30.0%
!!! CAATTGGTACTTTTTCATCA+TGG + chr7_4:51282785-51282804 Msa1161120:CDS 30.0%
ATCTTGAACATAAACCACAA+TGG - chr7_4:51282835-51282854 None:intergenic 30.0%
GGTTTATGTTCAAGATAATG+TGG + chr7_4:51282839-51282858 Msa1161120:CDS 30.0%
TACTGATATCATCATAGCAA+TGG - chr7_4:51282892-51282911 None:intergenic 30.0%
! TATAGAAATTTAGGGTCATC+AGG - chr7_4:51283029-51283048 None:intergenic 30.0%
! GCGCGAAATATAAAAGTTTT+TGG - chr7_4:51283149-51283168 None:intergenic 30.0%
! CTTTTATATTTCGCGCATTT+AGG + chr7_4:51283153-51283172 Msa1161120:intron 30.0%
ATATGGTATCTTAGAACCAT+TGG + chr7_4:51283177-51283196 Msa1161120:intron 30.0%
TCTATCTAAACTTGATCCAA+TGG - chr7_4:51283196-51283215 None:intergenic 30.0%
AGTTATCATTTCGGAACTAT+TGG - chr7_4:51283288-51283307 None:intergenic 30.0%
TATACGTTGAAATTGACACA+AGG - chr7_4:51283508-51283527 None:intergenic 30.0%
TCATTAGAATGCTTCCAATT+TGG + chr7_4:51283680-51283699 Msa1161120:CDS 30.0%
AAAATTCCTGATGACCAAAT+TGG - chr7_4:51283697-51283716 None:intergenic 30.0%
GACACCAAAAATTGACATAT+TGG - chr7_4:51283815-51283834 None:intergenic 30.0%
! TGCTGCAAAGTTTAACTTAT+TGG + chr7_4:51284008-51284027 Msa1161120:CDS 30.0%
! CTAATAGGGATTATTGCTTT+TGG - chr7_4:51284039-51284058 None:intergenic 30.0%
TGTACCAGAATAATTACCAA+TGG - chr7_4:51284202-51284221 None:intergenic 30.0%
TCAATAGTCCATAAGTATAC+TGG + chr7_4:51284231-51284250 Msa1161120:CDS 30.0%
TTTCCTTACCAGTATACTTA+TGG - chr7_4:51284242-51284261 None:intergenic 30.0%
TTCCTGATAGAAACCTTAAT+AGG + chr7_4:51284271-51284290 Msa1161120:CDS 30.0%
TCCTGATAGAAACCTTAATA+GGG + chr7_4:51284272-51284291 Msa1161120:CDS 30.0%
GAATTTAAAAGATGGTAAGG+AGG + chr7_4:51284458-51284477 Msa1161120:CDS 30.0%
AGATGAATGAAATTATGGTG+CGG + chr7_4:51284503-51284522 Msa1161120:exon 30.0%
ACTATATCACAAAGCAGCTA+AGG + chr7_4:51278721-51278740 Msa1161120:five_prime_UTR 35.0%
AAAGCAGCTAAGGATATAGT+TGG + chr7_4:51278731-51278750 Msa1161120:five_prime_UTR 35.0%
GTGTCAAGTATCCATAATTG+AGG + chr7_4:51278795-51278814 Msa1161120:five_prime_UTR 35.0%
GTCAAGTATCCATAATTGAG+GGG + chr7_4:51278797-51278816 Msa1161120:five_prime_UTR 35.0%
TATCCATAATTGAGGGGAAA+TGG + chr7_4:51278803-51278822 Msa1161120:exon 35.0%
GGAAATGGTAGAAAAAGAAG+TGG + chr7_4:51278854-51278873 Msa1161120:CDS 35.0%
CGAACATTACCTTTCATTCT+TGG + chr7_4:51278921-51278940 Msa1161120:CDS 35.0%
ATAAGCTCACCAAGAATGAA+AGG - chr7_4:51278933-51278952 None:intergenic 35.0%
! CAAAAAGCATGAATGAGAAG+GGG - chr7_4:51279038-51279057 None:intergenic 35.0%
!!! AGTTTTGGTAATGTGGAGTT+TGG - chr7_4:51279497-51279516 None:intergenic 35.0%
! CCTCATAGGAAAATGAGTTT+TGG - chr7_4:51279512-51279531 None:intergenic 35.0%
! CCAAAACTCATTTTCCTATG+AGG + chr7_4:51279509-51279528 Msa1161120:intron 35.0%
!!! AGCAAACTTTTTTCCCATGA+TGG + chr7_4:51279550-51279569 Msa1161120:intron 35.0%
!!! GCAAACTTTTTTCCCATGAT+GGG + chr7_4:51279551-51279570 Msa1161120:intron 35.0%
AAAGTGAAGTTTCCCATCAT+GGG - chr7_4:51279566-51279585 None:intergenic 35.0%
AAAAGTGAAGTTTCCCATCA+TGG - chr7_4:51279567-51279586 None:intergenic 35.0%
ACTCTAGATAAGCTTAACAG+TGG - chr7_4:51279642-51279661 None:intergenic 35.0%
GTGTGAAGGTTATCTGATAT+GGG - chr7_4:51280218-51280237 None:intergenic 35.0%
TGTGTGAAGGTTATCTGATA+TGG - chr7_4:51280219-51280238 None:intergenic 35.0%
CTACAATTTCATGGATGAGA+TGG + chr7_4:51280280-51280299 Msa1161120:CDS 35.0%
!!! GCAAACTTTTTTCCCATGAT+GGG - chr7_4:51279551-51279570 None:intergenic 35.0%
!!! AGCAAACTTTTTTCCCATGA+TGG - chr7_4:51279550-51279569 None:intergenic 35.0%
GCGTTAACTCTCTAATTCAT+AGG - chr7_4:51280526-51280545 None:intergenic 35.0%
! ATGTGTTTCAGCTCAGATTT+TGG - chr7_4:51280599-51280618 None:intergenic 35.0%
TGTTCTACTCATCTCAAACT+TGG + chr7_4:51280625-51280644 Msa1161120:intron 35.0%
AGTTACAGAATATTTGCACG+TGG - chr7_4:51280724-51280743 None:intergenic 35.0%
GTCCATACTGTATAATGAAG+TGG + chr7_4:51280774-51280793 Msa1161120:intron 35.0%
CACCACTTCATTATACAGTA+TGG - chr7_4:51280779-51280798 None:intergenic 35.0%
CAACTCAAGTAGTAAAGAAC+TGG - chr7_4:51281199-51281218 None:intergenic 35.0%
CAGTTCTTTACTACTTGAGT+TGG + chr7_4:51281197-51281216 Msa1161120:intron 35.0%
AATCGATGGCTACAATTAAG+AGG - chr7_4:51281253-51281272 None:intergenic 35.0%
! ACGTGAGTTTTCTTAAAAGC+AGG - chr7_4:51281379-51281398 None:intergenic 35.0%
GAAGTATGTGATAGATTTGC+GGG + chr7_4:51281979-51281998 Msa1161120:CDS 35.0%
CAATGGCATATTCAACTCTT+GGG - chr7_4:51282040-51282059 None:intergenic 35.0%
AATACACTCACAAACTTTGG+TGG + chr7_4:51282072-51282091 Msa1161120:CDS 35.0%
AAGATACCAGTTCATAGATG+AGG - chr7_4:51282179-51282198 None:intergenic 35.0%
! CCGATCTGAAACCATTTATT+TGG - chr7_4:51282378-51282397 None:intergenic 35.0%
AATAAATGGTTTCAGATCGG+TGG + chr7_4:51282378-51282397 Msa1161120:intron 35.0%
CAATTTACTTGTGTTGGACA+TGG - chr7_4:51282609-51282628 None:intergenic 35.0%
CAATTCGACATGACAAAAGA+CGG + chr7_4:51282735-51282754 Msa1161120:CDS 35.0%
ATGTTCAAGATAATGTGGGT+TGG + chr7_4:51282844-51282863 Msa1161120:CDS 35.0%
TGTTCAAGATAATGTGGGTT+GGG + chr7_4:51282845-51282864 Msa1161120:CDS 35.0%
GATATCATCATAGCAATGGT+GGG - chr7_4:51282888-51282907 None:intergenic 35.0%
TGATATCATCATAGCAATGG+TGG - chr7_4:51282889-51282908 None:intergenic 35.0%
! GGTTTCACAGTCTTATACAA+TGG - chr7_4:51282936-51282955 None:intergenic 35.0%
TATAAGACTGTGAAACCAGA+AGG + chr7_4:51282939-51282958 Msa1161120:CDS 35.0%
!! GATGCTGCTATTTCTTTAGA+AGG + chr7_4:51283065-51283084 Msa1161120:CDS 35.0%
TTTGAATAAAGGGGTTGAGT+TGG + chr7_4:51283360-51283379 Msa1161120:intron 35.0%
GAGACACCATAGATGAATTA+AGG - chr7_4:51283545-51283564 None:intergenic 35.0%
ACTAAATTCCAAAGGTTTGG+TGG - chr7_4:51283628-51283647 None:intergenic 35.0%
GTGACTAAATTCCAAAGGTT+TGG - chr7_4:51283631-51283650 None:intergenic 35.0%
! CAATTTGGAATGAATGAGTG+AGG - chr7_4:51283786-51283805 None:intergenic 35.0%
CCAAAAATTGACATATTGGC+TGG - chr7_4:51283811-51283830 None:intergenic 35.0%
! CCAGCCAATATGTCAATTTT+TGG + chr7_4:51283808-51283827 Msa1161120:CDS 35.0%
TAACTCCTATCATCATGGTT+AGG - chr7_4:51283837-51283856 None:intergenic 35.0%
TAGCATAACTCCTATCATCA+TGG - chr7_4:51283842-51283861 None:intergenic 35.0%
AGGATTCTTTGTCAATCTAC+GGG - chr7_4:51283890-51283909 None:intergenic 35.0%
CAGGATTCTTTGTCAATCTA+CGG - chr7_4:51283891-51283910 None:intergenic 35.0%
TGTTTACAAAGAATGGGAGT+AGG + chr7_4:51283922-51283941 Msa1161120:CDS 35.0%
GTTTACAAAGAATGGGAGTA+GGG + chr7_4:51283923-51283942 Msa1161120:CDS 35.0%
TACTATAGTTTCAGCACTAG+TGG + chr7_4:51283966-51283985 Msa1161120:CDS 35.0%
GTACCTCAATATTGTCTTCA+TGG + chr7_4:51284072-51284091 Msa1161120:CDS 35.0%
ACACCATGAAGACAATATTG+AGG - chr7_4:51284078-51284097 None:intergenic 35.0%
TCAATATTGTCTTCATGGTG+TGG + chr7_4:51284077-51284096 Msa1161120:CDS 35.0%
TTTCATGTCTGTTGGACATT+TGG + chr7_4:51284107-51284126 Msa1161120:CDS 35.0%
TATTGCATAACTACAGCCAT+TGG + chr7_4:51284183-51284202 Msa1161120:CDS 35.0%
! ACAGCCATTGGTAATTATTC+TGG + chr7_4:51284195-51284214 Msa1161120:CDS 35.0%
AGTCCATAAGTATACTGGTA+AGG + chr7_4:51284236-51284255 Msa1161120:CDS 35.0%
CCTGATAGAAACCTTAATAG+GGG + chr7_4:51284273-51284292 Msa1161120:CDS 35.0%
AAACCTTAATAGGGGTAGAT+TGG + chr7_4:51284281-51284300 Msa1161120:CDS 35.0%
! TTTTACACTTACAAGCCAGT+TGG + chr7_4:51284372-51284391 Msa1161120:CDS 35.0%
CTTTCACAAATTTCTCCAAC+TGG - chr7_4:51284390-51284409 None:intergenic 35.0%
CAGTTGGAGAAATTTGTGAA+AGG + chr7_4:51284388-51284407 Msa1161120:CDS 35.0%
AGAAATTTGTGAAAGGAGCA+AGG + chr7_4:51284395-51284414 Msa1161120:CDS 35.0%
TCTCCATTTCCCCTCAATTA+TGG - chr7_4:51278809-51278828 None:intergenic 40.0%
GAAGGGGATTAAGAACAACA+TGG + chr7_4:51278833-51278852 Msa1161120:CDS 40.0%
! TGGTAATGTGGAGTTTGGTT+GGG - chr7_4:51279492-51279511 None:intergenic 40.0%
!! TTGGTAATGTGGAGTTTGGT+TGG - chr7_4:51279493-51279512 None:intergenic 40.0%
TATGAGGTGAAGTTTAGCCT+GGG + chr7_4:51279525-51279544 Msa1161120:intron 40.0%
! GGAAAAAAGTTTGCTTTCCC+AGG - chr7_4:51280486-51280505 None:intergenic 40.0%
! CAGACACCAAACAGTTTTCT+CGG + chr7_4:51279589-51279608 Msa1161120:intron 40.0%
TCACAACCGAGAAAACTGTT+TGG - chr7_4:51279598-51279617 None:intergenic 40.0%
ACCTTCACACACCAAATTAC+TGG + chr7_4:51280228-51280247 Msa1161120:CDS 40.0%
!! TCCAGTAATTTGGTGTGTGA+AGG - chr7_4:51280232-51280251 None:intergenic 40.0%
TTCACACACCAAATTACTGG+AGG + chr7_4:51280231-51280250 Msa1161120:CDS 40.0%
CAACGGTTCAGATCATAAGT+TGG - chr7_4:51280416-51280435 None:intergenic 40.0%
GTCAAGAGTCTACATCTAGT+TGG - chr7_4:51280573-51280592 None:intergenic 40.0%
! CTCATCTCAAACTTGGTGAA+AGG + chr7_4:51280632-51280651 Msa1161120:intron 40.0%
! GTGAAGGGAGTAACATTTTG+CGG + chr7_4:51280688-51280707 Msa1161120:intron 40.0%
ATGAACTTGCATTTGCAGTG+TGG - chr7_4:51280825-51280844 None:intergenic 40.0%
AGTAGTAAAGAACTGGCAAC+TGG - chr7_4:51281192-51281211 None:intergenic 40.0%
GCATATTCAACTCTTGGGTT+AGG - chr7_4:51282035-51282054 None:intergenic 40.0%
CCAATGGCATATTCAACTCT+TGG - chr7_4:51282041-51282060 None:intergenic 40.0%
CCAAGAGTTGAATATGCCAT+TGG + chr7_4:51282038-51282057 Msa1161120:CDS 40.0%
! GTATTTGAAGCTGCTACCAA+TGG - chr7_4:51282057-51282076 None:intergenic 40.0%
! TCTAGTTTCACCCCTCTTAT+TGG + chr7_4:51282099-51282118 Msa1161120:CDS 40.0%
CTAGTTTCACCCCTCTTATT+GGG + chr7_4:51282100-51282119 Msa1161120:CDS 40.0%
TAGTTTCACCCCTCTTATTG+GGG + chr7_4:51282101-51282120 Msa1161120:CDS 40.0%
AAATAGTGCCCCAATAAGAG+GGG - chr7_4:51282112-51282131 None:intergenic 40.0%
CAAATAGTGCCCCAATAAGA+GGG - chr7_4:51282113-51282132 None:intergenic 40.0%
CTATTTGCAGACTCATTTGC+TGG + chr7_4:51282126-51282145 Msa1161120:CDS 40.0%
!! ACTCATTTGCTGGACGATTT+TGG + chr7_4:51282136-51282155 Msa1161120:CDS 40.0%
TTTACTTGTGTTGGACATGG+TGG - chr7_4:51282606-51282625 None:intergenic 40.0%
! GCTGAAAAAGGTACAACACA+AGG - chr7_4:51282711-51282730 None:intergenic 40.0%
! TCGAATTGGTCTGCTGAAAA+AGG - chr7_4:51282723-51282742 None:intergenic 40.0%
! CGTCTTTTGTCATGTCGAAT+TGG - chr7_4:51282737-51282756 None:intergenic 40.0%
GGAAATGGAACCTCTTCAAT+TGG + chr7_4:51282769-51282788 Msa1161120:CDS 40.0%
TCTAAGTGCTTTGACCATTG+TGG + chr7_4:51282818-51282837 Msa1161120:CDS 40.0%
! GTTCAAGATAATGTGGGTTG+GGG + chr7_4:51282846-51282865 Msa1161120:CDS 40.0%
TTGTGGCTGCTGTAAAGAAA+AGG + chr7_4:51282991-51283010 Msa1161120:CDS 40.0%
ATTTCGCGCATTTAGGCATA+TGG + chr7_4:51283160-51283179 Msa1161120:intron 40.0%
CATGCACGCAGTTATCATTT+CGG - chr7_4:51283297-51283316 None:intergenic 40.0%
ATCTATGGTGTCTCTGTAGA+TGG + chr7_4:51283551-51283570 Msa1161120:intron 40.0%
TGCAATTGTCACAGAAGAAG+AGG + chr7_4:51283585-51283604 Msa1161120:CDS 40.0%
! TGGTGGTGCATTTGAATCTT+TGG - chr7_4:51283611-51283630 None:intergenic 40.0%
GGACAGTGACTAAATTCCAA+AGG - chr7_4:51283636-51283655 None:intergenic 40.0%
CTTTCAGTTCCTCAACTCTA+TGG - chr7_4:51283657-51283676 None:intergenic 40.0%
ATGCTTCCAATTTGGTCATC+AGG + chr7_4:51283688-51283707 Msa1161120:CDS 40.0%
! ACATATTGGCTGGTGCAATT+TGG - chr7_4:51283801-51283820 None:intergenic 40.0%
AGATTGACAAAGAATCCTGC+TGG + chr7_4:51283892-51283911 Msa1161120:CDS 40.0%
TGTAAACATGTGATTCCAGC+AGG - chr7_4:51283910-51283929 None:intergenic 40.0%
! GCTGAAGTTTTCATGTCTGT+TGG + chr7_4:51284099-51284118 Msa1161120:CDS 40.0%
GCACTACTTCTCATACTTTC+AGG - chr7_4:51284153-51284172 None:intergenic 40.0%
CCCCTATTAAGGTTTCTATC+AGG - chr7_4:51284276-51284295 None:intergenic 40.0%
AGTCCAATCTACCCCTATTA+AGG - chr7_4:51284287-51284306 None:intergenic 40.0%
AAGGAGCAAGGAAGAAGATT+TGG + chr7_4:51284407-51284426 Msa1161120:CDS 40.0%
GTAAGGAGGAAGAGAAGAAA+GGG + chr7_4:51284472-51284491 Msa1161120:CDS 40.0%
GCAGCTAAGGATATAGTTGG+AGG + chr7_4:51278734-51278753 Msa1161120:five_prime_UTR 45.0%
GGATATAGTTGGAGGAGTAG+TGG + chr7_4:51278742-51278761 Msa1161120:five_prime_UTR 45.0%
AGGGGAAATGGAGATAGAGA+AGG + chr7_4:51278815-51278834 Msa1161120:exon 45.0%
GGGGAAATGGAGATAGAGAA+GGG + chr7_4:51278816-51278835 Msa1161120:exon 45.0%
GGGAAATGGAGATAGAGAAG+GGG + chr7_4:51278817-51278836 Msa1161120:exon 45.0%
AAGCATGAATGAGAAGGGGA+AGG - chr7_4:51279034-51279053 None:intergenic 45.0%
CAGGCTAAACTTCACCTCAT+AGG - chr7_4:51279526-51279545 None:intergenic 45.0%
CTATGAGGTGAAGTTTAGCC+TGG + chr7_4:51279524-51279543 Msa1161120:intron 45.0%
! ACAGTCAAGGAGCTTTTGCA+CGG + chr7_4:51279845-51279864 Msa1161120:intron 45.0%
ATCTTGTGTGCATGACGTGA+CGG - chr7_4:51279892-51279911 None:intergenic 45.0%
CACACCAAATTACTGGAGGA+TGG + chr7_4:51280235-51280254 Msa1161120:CDS 45.0%
CTTGCCATCCTCCAGTAATT+TGG - chr7_4:51280242-51280261 None:intergenic 45.0%
AGCACACCACGTTTGATTGT+GGG + chr7_4:51280306-51280325 Msa1161120:CDS 45.0%
AGTGGCACAGAGATATTGTG+AGG + chr7_4:51280352-51280371 Msa1161120:intron 45.0%
GTGGCACAGAGATATTGTGA+GGG + chr7_4:51280353-51280372 Msa1161120:intron 45.0%
CTCTCTAATTCATAGGAGGG+TGG - chr7_4:51280519-51280538 None:intergenic 45.0%
GATGTGCCCAAAAATTCCAC+CGG + chr7_4:51281156-51281175 Msa1161120:intron 45.0%
! TGGACACCGGTGGAATTTTT+GGG - chr7_4:51281165-51281184 None:intergenic 45.0%
! ATGGACACCGGTGGAATTTT+TGG - chr7_4:51281166-51281185 None:intergenic 45.0%
AAGAACTGGCAACTGGACAA+TGG - chr7_4:51281185-51281204 None:intergenic 45.0%
CATGTCAATCGAGTCACACA+TGG + chr7_4:51281227-51281246 Msa1161120:intron 45.0%
GCAAATAGTGCCCCAATAAG+AGG - chr7_4:51282114-51282133 None:intergenic 45.0%
! CGATTTTGGACCATCACTGT+TGG + chr7_4:51282150-51282169 Msa1161120:CDS 45.0%
TGGATGCCTCATCTATGAAC+TGG + chr7_4:51282170-51282189 Msa1161120:CDS 45.0%
ATGGTTTCAGATCGGTGGTT+AGG + chr7_4:51282383-51282402 Msa1161120:intron 45.0%
TGGTTTCAGATCGGTGGTTA+GGG + chr7_4:51282384-51282403 Msa1161120:intron 45.0%
CAAAAGACGGTGTAGCTTCT+AGG + chr7_4:51282748-51282767 Msa1161120:CDS 45.0%
! ACGGTGTAGCTTCTAGGAAA+TGG + chr7_4:51282754-51282773 Msa1161120:CDS 45.0%
!! AAGATAATGTGGGTTGGGGT+TGG + chr7_4:51282850-51282869 Msa1161120:CDS 45.0%
!! AGATAATGTGGGTTGGGGTT+GGG + chr7_4:51282851-51282870 Msa1161120:CDS 45.0%
! AGGAAGTCCTTTGACTCGTT+TGG + chr7_4:51282959-51282978 Msa1161120:CDS 45.0%
ACTTGAGCCAAACGAGTCAA+AGG - chr7_4:51282969-51282988 None:intergenic 45.0%
! TTTGACTCGTTTGGCTCAAG+TGG + chr7_4:51282968-51282987 Msa1161120:CDS 45.0%
GGCTGCTGTAAAGAAAAGGA+AGG + chr7_4:51282995-51283014 Msa1161120:CDS 45.0%
ATGGTGTCTCTGTAGATGGT+TGG + chr7_4:51283555-51283574 Msa1161120:intron 45.0%
CAAATGCACCACCAAACCTT+TGG + chr7_4:51283617-51283636 Msa1161120:CDS 45.0%
AGTCACTGTCCATAGAGTTG+AGG + chr7_4:51283645-51283664 Msa1161120:CDS 45.0%
CATTCAACAAGCTCGTTCCA+TGG + chr7_4:51283753-51283772 Msa1161120:CDS 45.0%
GGAATGAATGAGTGAGGTGA+CGG - chr7_4:51283780-51283799 None:intergenic 45.0%
GGTGTCCTAACCATGATGAT+AGG + chr7_4:51283829-51283848 Msa1161120:CDS 45.0%
TTGTCAATCTACGGGCGAAT+GGG - chr7_4:51283882-51283901 None:intergenic 45.0%
TTTGTCAATCTACGGGCGAA+TGG - chr7_4:51283883-51283902 None:intergenic 45.0%
AAGAATGGGAGTAGGGTTTG+TGG + chr7_4:51283930-51283949 Msa1161120:CDS 45.0%
GGTAAGGAGGAAGAGAAGAA+AGG + chr7_4:51284471-51284490 Msa1161120:CDS 45.0%
!! TTAATAAAAAAAAAATCATA+AGG - chr7_4:51279097-51279116 None:intergenic 5.0%
!!! TTTTTTTTATTAAAACTAAA+AGG + chr7_4:51279104-51279123 Msa1161120:intron 5.0%
!! AAAAAGTTAAAATATTTATA+TGG - chr7_4:51281289-51281308 None:intergenic 5.0%
!!! TTAATAAAGTAATTTTTTTA+AGG - chr7_4:51281768-51281787 None:intergenic 5.0%
AAAATGAACCACCCTCGTCG+AGG + chr7_4:51278891-51278910 Msa1161120:CDS 50.0%
TTTGCACGGTGGTCATTCGA+CGG + chr7_4:51279859-51279878 Msa1161120:intron 50.0%
GAGCACACCACGTTTGATTG+TGG + chr7_4:51280305-51280324 Msa1161120:CDS 50.0%
ACCACGTTTGATTGTGGGAG+CGG + chr7_4:51280311-51280330 Msa1161120:CDS 50.0%
AGGAGGGTGGCATTTAGCAT+GGG - chr7_4:51280506-51280525 None:intergenic 50.0%
TAGGAGGGTGGCATTTAGCA+TGG - chr7_4:51280507-51280526 None:intergenic 50.0%
! TGGTTTGGCAAGTGTCTACG+TGG + chr7_4:51280899-51280918 Msa1161120:intron 50.0%
TGTGATAGATTTGCGGGTGC+TGG + chr7_4:51281985-51282004 Msa1161120:CDS 50.0%
! GATGAGGCATCCAACAGTGA+TGG - chr7_4:51282163-51282182 None:intergenic 50.0%
ACTTGTGTTGGACATGGTGG+AGG - chr7_4:51282603-51282622 None:intergenic 50.0%
AGGAGGAGAGACATGTAGAG+TGG - chr7_4:51282660-51282679 None:intergenic 50.0%
TCTCTCCTCCTCACATCTCT+TGG + chr7_4:51282669-51282688 Msa1161120:CDS 50.0%
CTGATCCAAGAGATGTGAGG+AGG - chr7_4:51282677-51282696 None:intergenic 50.0%
CTCCTCACATCTCTTGGATC+AGG + chr7_4:51282675-51282694 Msa1161120:CDS 50.0%
CACCTGATCCAAGAGATGTG+AGG - chr7_4:51282680-51282699 None:intergenic 50.0%
CTCACATCTCTTGGATCAGG+TGG + chr7_4:51282678-51282697 Msa1161120:CDS 50.0%
!! GATAATGTGGGTTGGGGTTG+GGG + chr7_4:51282852-51282871 Msa1161120:CDS 50.0%
CGAGTCAAAGGACTTCCTTC+TGG - chr7_4:51282957-51282976 None:intergenic 50.0%
! TCGTTTGGCTCAAGTGGTTG+TGG + chr7_4:51282974-51282993 Msa1161120:CDS 50.0%
CAGCATCAAGCTCCCTATTG+TGG - chr7_4:51283052-51283071 None:intergenic 50.0%
TTCGGATTCCTCCTCGACGA+GGG - chr7_4:51278905-51278924 None:intergenic 55.0%
AGACCGCAGCAAGGTTGTGT+GGG + chr7_4:51279768-51279787 Msa1161120:intron 55.0%
AACACTGGCGAGGACAGTCA+AGG + chr7_4:51279832-51279851 Msa1161120:intron 55.0%
! GTCAAGGAGCTTTTGCACGG+TGG + chr7_4:51279848-51279867 Msa1161120:intron 55.0%
TTGTGTGCATGACGTGACGG+CGG - chr7_4:51279889-51279908 None:intergenic 55.0%
ACCGCTCCCACAATCAAACG+TGG - chr7_4:51280315-51280334 None:intergenic 55.0%
AACTGGACAATGGACACCGG+TGG - chr7_4:51281175-51281194 None:intergenic 55.0%
GGCAACTGGACAATGGACAC+CGG - chr7_4:51281178-51281197 None:intergenic 55.0%
! CATGGTGGAGGACGGAAATG+TGG - chr7_4:51282591-51282610 None:intergenic 55.0%
! GTGTTGGACATGGTGGAGGA+CGG - chr7_4:51282599-51282618 None:intergenic 55.0%
! ATGAGTGAGGTGACGGTCCA+TGG - chr7_4:51283773-51283792 None:intergenic 55.0%
ATGAACCACCCTCGTCGAGG+AGG + chr7_4:51278894-51278913 Msa1161120:CDS 60.0%
GTTCGGATTCCTCCTCGACG+AGG - chr7_4:51278906-51278925 None:intergenic 60.0%
AGGCTTCTCAGACCGCAGCA+AGG + chr7_4:51279759-51279778 Msa1161120:intron 60.0%
CAGACCGCAGCAAGGTTGTG+TGG + chr7_4:51279767-51279786 Msa1161120:intron 60.0%
GACCGCAGCAAGGTTGTGTG+GGG + chr7_4:51279769-51279788 Msa1161120:intron 60.0%
ACCGCAGCAAGGTTGTGTGG+GGG + chr7_4:51279770-51279789 Msa1161120:intron 60.0%
TCCCCCACACAACCTTGCTG+CGG - chr7_4:51279774-51279793 None:intergenic 60.0%
GGTTGTGTGGGGGATCGAGA+AGG + chr7_4:51279780-51279799 Msa1161120:intron 60.0%
TGTGTGGGGGATCGAGAAGG+CGG + chr7_4:51279783-51279802 Msa1161120:intron 60.0%
! CCACCTCTATGGTGGTAGCG+CGG + chr7_4:51279806-51279825 Msa1161120:intron 60.0%
GGATTCCTCCTCGACGAGGG+TGG - chr7_4:51278902-51278921 None:intergenic 65.0%
CGAGAAGGCGGCCACCTCTA+TGG + chr7_4:51279795-51279814 Msa1161120:intron 65.0%
GAAGGCGGCCACCTCTATGG+TGG + chr7_4:51279798-51279817 Msa1161120:intron 65.0%
CCGCGCTACCACCATAGAGG+TGG - chr7_4:51279809-51279828 None:intergenic 65.0%
CCACCGCGCTACCACCATAG+AGG - chr7_4:51279812-51279831 None:intergenic 65.0%
! CCTCTATGGTGGTAGCGCGG+TGG + chr7_4:51279809-51279828 Msa1161120:intron 65.0%
! GTGGTAGCGCGGTGGAACAC+TGG + chr7_4:51279817-51279836 Msa1161120:intron 65.0%
!! GTGGGTTGGGGTTGGGGACT+TGG + chr7_4:51282858-51282877 Msa1161120:CDS 65.0%
AGCGCGGTGGAACACTGGCG+AGG + chr7_4:51279822-51279841 Msa1161120:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 51278719 51284733 51278719 ID=Msa1161120;Name=Msa1161120
chr7_4 mRNA 51278719 51284733 51278719 ID=Msa1161120-mRNA-1;Parent=Msa1161120;Name=Msa1161120-mRNA-1;_AED=0.27;_eAED=0.27;_QI=103|0.75|0.8|1|1|1|5|221|659
chr7_4 exon 51278719 51278942 51278719 ID=Msa1161120-mRNA-1:exon:14431;Parent=Msa1161120-mRNA-1
chr7_4 exon 51280195 51280332 51280195 ID=Msa1161120-mRNA-1:exon:14432;Parent=Msa1161120-mRNA-1
chr7_4 exon 51281974 51282191 51281974 ID=Msa1161120-mRNA-1:exon:14433;Parent=Msa1161120-mRNA-1
chr7_4 exon 51282555 51283114 51282555 ID=Msa1161120-mRNA-1:exon:14434;Parent=Msa1161120-mRNA-1
chr7_4 exon 51283570 51284733 51283570 ID=Msa1161120-mRNA-1:exon:14435;Parent=Msa1161120-mRNA-1
chr7_4 five_prime_UTR 51278719 51278821 51278719 ID=Msa1161120-mRNA-1:five_prime_utr;Parent=Msa1161120-mRNA-1
chr7_4 CDS 51278822 51278942 51278822 ID=Msa1161120-mRNA-1:cds;Parent=Msa1161120-mRNA-1
chr7_4 CDS 51280195 51280332 51280195 ID=Msa1161120-mRNA-1:cds;Parent=Msa1161120-mRNA-1
chr7_4 CDS 51281974 51282191 51281974 ID=Msa1161120-mRNA-1:cds;Parent=Msa1161120-mRNA-1
chr7_4 CDS 51282555 51283114 51282555 ID=Msa1161120-mRNA-1:cds;Parent=Msa1161120-mRNA-1
chr7_4 CDS 51283570 51284512 51283570 ID=Msa1161120-mRNA-1:cds;Parent=Msa1161120-mRNA-1
chr7_4 three_prime_UTR 51284513 51284733 51284513 ID=Msa1161120-mRNA-1:three_prime_utr;Parent=Msa1161120-mRNA-1
Gene Sequence

>Msa1161120

ATGGAGATAGAGAAGGGGATTAAGAACAACATGGAAATGGTAGAAAAAGAAGTGGAGACAGACAGCAAGAAAATGAACCACCCTCGTCGAGGAGGAATCCGAACATTACCTTTCATTCTTGGAGCTCTTGCAAAACTTATACCCATATCAGATAACCTTCACACACCAAATTACTGGAGGATGGCAAGAAGAATGTTAGATAATGTCTACAATTTCATGGATGAGATGGCAGAGCACACCACGTTTGATTGTGGGAGCGCAAATGAAGTATGTGATAGATTTGCGGGTGCTGGATTTCACAGTAACTTGATAAGTTACCTAACCCAAGAGTTGAATATGCCATTGGTAGCAGCTTCAAATACACTCACAAACTTTGGTGGAACATCTAGTTTCACCCCTCTTATTGGGGCACTATTTGCAGACTCATTTGCTGGACGATTTTGGACCATCACTGTTGGATGCCTCATCTATGAACTGGGATTGATTAGTATCACTGTATCAACTATACTACCACATTTCCGTCCTCCACCATGTCCAACACAAGTAAATTGCAAAGAAGCCACATCTTCACAATTATTACCACTCTACATGTCTCTCCTCCTCACATCTCTTGGATCAGGTGGCATTAGACCTTGTGTTGTACCTTTTTCAGCAGACCAATTCGACATGACAAAAGACGGTGTAGCTTCTAGGAAATGGAACCTCTTCAATTGGTACTTTTTCATCATGGGTTTTGCTTCTCTAAGTGCTTTGACCATTGTGGTTTATGTTCAAGATAATGTGGGTTGGGGTTGGGGACTTGGCATTCCCACCATTGCTATGATGATATCAGTAATTTCATTTGTGTTGGGCTCACCATTGTATAAGACTGTGAAACCAGAAGGAAGTCCTTTGACTCGTTTGGCTCAAGTGGTTGTGGCTGCTGTAAAGAAAAGGAAGGAGACATTACCTGATGACCCTAAATTTCTATACCACAATAGGGAGCTTGATGCTGCTATTTCTTTAGAAGGAAGTCTTTTACACTCAAATCAATATAAATGGTTGGACAAAGCTGCAATTGTCACAGAAGAAGAGGCCAAAGATTCAAATGCACCACCAAACCTTTGGAATTTAGTCACTGTCCATAGAGTTGAGGAACTGAAAGCTATCATTAGAATGCTTCCAATTTGGTCATCAGGAATTTTGCTCATAATGTCTTCATCACATTTAGGTAGTTTTGTCATTCAACAAGCTCGTTCCATGGACCGTCACCTCACTCATTCATTCCAAATTGCACCAGCCAATATGTCAATTTTTGGTGTCCTAACCATGATGATAGGAGTTATGCTATATGAACGCTTTTTCGTCCCATTCGCCCGTAGATTGACAAAGAATCCTGCTGGAATCACATGTTTACAAAGAATGGGAGTAGGGTTTGTGGTTAACATTATAGCTACTATAGTTTCAGCACTAGTGGAAATGAAAAGAAAAACAGTTGCTGCAAAGTTTAACTTATTGGATGATCCAAAAGCAATAATCCCTATTAGTGTATTTTGGTTAGTACCTCAATATTGTCTTCATGGTGTGGCTGAAGTTTTCATGTCTGTTGGACATTTGGAATTTCTCTTTGATCAATCACCTGAAAGTATGAGAAGTAGTGCTACTGCTTTGTATTGCATAACTACAGCCATTGGTAATTATTCTGGTACATTATTGGTATCAATAGTCCATAAGTATACTGGTAAGGAAAATAATTGGCTTCCTGATAGAAACCTTAATAGGGGTAGATTGGACTACTATTATTATCTTATTAGTGGCATTCAAGTAATAAATCTCATTTATTATATAGTATGTGCTTGGTTTTACACTTACAAGCCAGTTGGAGAAATTTGTGAAAGGAGCAAGGAAGAAGATTTGGAACTAGCAAGTGCAAACATATCAATTGAGAATTTAAAAGATGGTAAGGAGGAAGAGAAGAAAGGGTTTACTAAAGATGAATGA
Protein sequence

>Msa1161120

MEIEKGIKNNMEMVEKEVETDSKKMNHPRRGGIRTLPFILGALAKLIPISDNLHTPNYWRMARRMLDNVYNFMDEMAEHTTFDCGSANEVCDRFAGAGFHSNLISYLTQELNMPLVAASNTLTNFGGTSSFTPLIGALFADSFAGRFWTITVGCLIYELGLISITVSTILPHFRPPPCPTQVNCKEATSSQLLPLYMSLLLTSLGSGGIRPCVVPFSADQFDMTKDGVASRKWNLFNWYFFIMGFASLSALTIVVYVQDNVGWGWGLGIPTIAMMISVISFVLGSPLYKTVKPEGSPLTRLAQVVVAAVKKRKETLPDDPKFLYHNRELDAAISLEGSLLHSNQYKWLDKAAIVTEEEAKDSNAPPNLWNLVTVHRVEELKAIIRMLPIWSSGILLIMSSSHLGSFVIQQARSMDRHLTHSFQIAPANMSIFGVLTMMIGVMLYERFFVPFARRLTKNPAGITCLQRMGVGFVVNIIATIVSALVEMKRKTVAAKFNLLDDPKAIIPISVFWLVPQYCLHGVAEVFMSVGHLEFLFDQSPESMRSSATALYCITTAIGNYSGTLLVSIVHKYTGKENNWLPDRNLNRGRLDYYYYLISGIQVINLIYYIVCAWFYTYKPVGEICERSKEEDLELASANISIENLKDGKEEEKKGFTKDE*