Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197170 | XP_013445999.1 | 93.367 | 392 | 20 | 1 | 1 | 392 | 1 | 386 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197170 | A0A072TS56 | 93.367 | 392 | 20 | 1 | 1 | 392 | 1 | 386 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1197170 | -0.800841 | 1.192460e-48 | -8.615850e-47 |
| Msa0609970 | Msa1197170 | 0.812348 | 4.435878e-51 | -8.615850e-47 |
| Msa0650650 | Msa1197170 | 0.805879 | 1.078549e-49 | -8.615850e-47 |
| Msa0650740 | Msa1197170 | 0.806989 | 6.291410e-50 | -8.615850e-47 |
| Msa0223100 | Msa1197170 | 0.828905 | 6.931237e-55 | -8.615850e-47 |
| Msa0223290 | Msa1197170 | 0.821846 | 3.250019e-53 | -8.615850e-47 |
| Msa0223380 | Msa1197170 | 0.800892 | 1.164199e-48 | -8.615850e-47 |
| Msa0469910 | Msa1197170 | -0.801844 | 7.432904e-49 | -8.615850e-47 |
| Msa0275400 | Msa1197170 | -0.830695 | 2.541203e-55 | -8.615850e-47 |
| Msa0302650 | Msa1197170 | 0.837244 | 5.826434e-57 | -8.615850e-47 |
| Msa1193950 | Msa1197170 | -0.817019 | 4.096797e-52 | -8.615850e-47 |
| Msa1197170 | Msa1219110 | 0.851973 | 6.258291e-61 | -8.615850e-47 |
| Msa1197170 | Msa1249920 | 0.877249 | 7.314043e-69 | -8.615850e-47 |
| Msa1197170 | Msa1291350 | 0.872611 | 2.783424e-67 | -8.615850e-47 |
| Msa1197170 | Msa1300860 | 0.809137 | 2.195396e-50 | -8.615850e-47 |
| Msa1197170 | Msa1442220 | -0.828692 | 7.807703e-55 | -8.615850e-47 |
| Msa0505060 | Msa1197170 | 0.826138 | 3.197012e-54 | -8.615850e-47 |
| Msa0575990 | Msa1197170 | -0.805576 | 1.248935e-49 | -8.615850e-47 |
| Msa0576100 | Msa1197170 | -0.803344 | 3.645825e-49 | -8.615850e-47 |
| Msa0579340 | Msa1197170 | 0.814225 | 1.716843e-51 | -8.615850e-47 |
| Msa0581920 | Msa1197170 | 0.800135 | 1.660987e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197170 | MtrunA17_Chr8g0365771 | 93.367 | 392 | 20 | 1 | 1 | 392 | 1 | 386 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197170 | AT1G70480.2 | 57.357 | 333 | 127 | 6 | 46 | 375 | 3 | 323 | 1.35e-126 | 368 |
| Msa1197170 | AT1G70480.1 | 60.129 | 311 | 109 | 6 | 68 | 375 | 7 | 305 | 6.65e-126 | 366 |
| Msa1197170 | AT1G23560.1 | 50.775 | 258 | 126 | 1 | 88 | 344 | 30 | 287 | 1.24e-93 | 284 |
| Msa1197170 | AT1G23560.2 | 50.775 | 258 | 126 | 1 | 88 | 344 | 30 | 287 | 1.24e-93 | 284 |
| Msa1197170 | AT1G23600.1 | 38.750 | 240 | 130 | 7 | 118 | 342 | 28 | 265 | 3.30e-52 | 175 |
| Msa1197170 | AT1G23690.1 | 40.367 | 218 | 117 | 5 | 126 | 331 | 44 | 260 | 4.95e-52 | 175 |
| Msa1197170 | AT1G23520.1 | 40.090 | 222 | 121 | 6 | 133 | 343 | 42 | 262 | 7.58e-51 | 172 |
| Msa1197170 | AT1G23690.2 | 38.532 | 218 | 116 | 5 | 126 | 331 | 44 | 255 | 1.71e-48 | 166 |
| Msa1197170 | AT1G23520.4 | 39.189 | 222 | 117 | 7 | 133 | 343 | 42 | 256 | 4.09e-47 | 162 |
| Msa1197170 | AT1G23640.1 | 39.013 | 223 | 122 | 6 | 132 | 342 | 42 | 262 | 3.56e-46 | 159 |
| Msa1197170 | AT1G23670.2 | 39.914 | 233 | 126 | 7 | 124 | 343 | 32 | 263 | 5.49e-46 | 159 |
| Msa1197170 | AT1G23660.1 | 37.557 | 221 | 126 | 5 | 133 | 342 | 43 | 262 | 3.53e-45 | 157 |
| Msa1197170 | AT1G23690.4 | 40.000 | 175 | 96 | 3 | 166 | 331 | 1 | 175 | 4.15e-42 | 146 |
| Msa1197170 | AT2G27670.1 | 35.776 | 232 | 136 | 5 | 115 | 334 | 49 | 279 | 8.85e-41 | 146 |
| Msa1197170 | AT1G23645.1 | 47.222 | 144 | 70 | 3 | 195 | 334 | 75 | 216 | 2.70e-38 | 137 |
| Msa1197170 | AT1G23590.1 | 39.362 | 188 | 96 | 5 | 131 | 305 | 29 | 211 | 7.71e-38 | 136 |
| Msa1197170 | AT1G23590.2 | 39.362 | 188 | 96 | 5 | 131 | 305 | 7 | 189 | 1.21e-37 | 135 |
| Msa1197170 | AT1G23600.2 | 42.667 | 150 | 84 | 2 | 195 | 342 | 70 | 219 | 3.76e-37 | 134 |
| Msa1197170 | AT1G23670.1 | 43.506 | 154 | 82 | 4 | 195 | 343 | 65 | 218 | 5.55e-33 | 123 |
| Msa1197170 | AT1G23570.3 | 42.361 | 144 | 77 | 3 | 195 | 334 | 1 | 142 | 1.88e-32 | 121 |
| Msa1197170 | AT1G23690.3 | 33.649 | 211 | 93 | 6 | 126 | 331 | 44 | 212 | 1.93e-32 | 122 |
| Msa1197170 | AT1G23570.2 | 42.361 | 144 | 77 | 3 | 195 | 334 | 78 | 219 | 9.34e-32 | 121 |
| Msa1197170 | AT1G23570.1 | 42.657 | 143 | 76 | 3 | 196 | 334 | 77 | 217 | 2.65e-31 | 120 |
| Msa1197170 | AT1G23580.1 | 41.176 | 153 | 84 | 3 | 195 | 343 | 47 | 197 | 5.79e-31 | 118 |
| Msa1197170 | AT1G23520.2 | 37.500 | 120 | 65 | 4 | 133 | 243 | 42 | 160 | 2.75e-18 | 82.0 |
| Msa1197170 | AT1G23510.1 | 34.058 | 138 | 79 | 4 | 133 | 258 | 46 | 183 | 3.70e-16 | 76.6 |
| Msa1197170 | AT1G23510.3 | 33.577 | 137 | 79 | 4 | 134 | 258 | 1 | 137 | 1.40e-15 | 73.9 |
| Msa1197170 | AT1G23510.2 | 33.577 | 137 | 79 | 4 | 134 | 258 | 1 | 137 | 1.40e-15 | 73.9 |
Find 87 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTGTTACGGGTTTAA+AGG | 0.177504 | 8_1:+47404275 | None:intergenic |
| TCTGGCATCTAAGCTGAATT+TGG | 0.201313 | 8_1:+47406109 | None:intergenic |
| CACTATTTCCATTAATGTTT+TGG | 0.211065 | 8_1:-47404848 | Msa1197170:CDS |
| AGTTGTTCAGATCACTTTAA+AGG | 0.213726 | 8_1:-47403876 | Msa1197170:three_prime_UTR |
| TTGATCGACCAAAACATTAA+TGG | 0.218609 | 8_1:+47404840 | None:intergenic |
| TCCTCTCAAATACCATGATA+TGG | 0.256091 | 8_1:+47404161 | None:intergenic |
| TTGAAAACTCTTCTATTATC+AGG | 0.264428 | 8_1:+47405221 | None:intergenic |
| ATCTTCAGCAAGCAGCTATT+TGG | 0.282634 | 8_1:-47404891 | Msa1197170:CDS |
| CTCATATCCTCCTCTGATTC+TGG | 0.288664 | 8_1:+47404086 | None:intergenic |
| CAGCTATTTGGAGATTTCTT+TGG | 0.298357 | 8_1:-47404879 | Msa1197170:CDS |
| AGTGATATCCAGAAAAGTTT+TGG | 0.302534 | 8_1:-47404941 | Msa1197170:CDS |
| CATGGAAAGAAAATCCTTCT+TGG | 0.315393 | 8_1:-47405804 | Msa1197170:CDS |
| CTTTCCTTGAATCTCTTCCT+TGG | 0.317797 | 8_1:+47404053 | None:intergenic |
| CAAAACATGAAGGAATGAAT+TGG | 0.343925 | 8_1:-47405900 | Msa1197170:CDS |
| TCCTTTGTTACGGGTTTAAA+GGG | 0.344218 | 8_1:+47404276 | None:intergenic |
| GAGGTTGCAAAGAGAACCTT+TGG | 0.345597 | 8_1:+47405301 | None:intergenic |
| TGGAGATTTCTTTGGTGGTC+TGG | 0.348608 | 8_1:-47404871 | Msa1197170:CDS |
| TTGTAATCTTCCTTTGTTAC+GGG | 0.356737 | 8_1:+47404267 | None:intergenic |
| AAAACATGAAGGAATGAATT+GGG | 0.369792 | 8_1:-47405899 | Msa1197170:CDS |
| GTTGCTTCGTCGACAAATAA+AGG | 0.370008 | 8_1:+47404306 | None:intergenic |
| ACTATATTATATACTGCATC+AGG | 0.370343 | 8_1:+47405251 | None:intergenic |
| TAAAGTGATCTGAACAACTA+TGG | 0.377847 | 8_1:+47403880 | None:intergenic |
| ACAAGAGGAAAAGGAAGAAT+TGG | 0.378739 | 8_1:-47404237 | Msa1197170:CDS |
| TCAAAGTTGGAAGTTGGAAA+TGG | 0.385851 | 8_1:+47407236 | None:intergenic |
| TTTCCAACTTCCAACTTTGA+AGG | 0.403934 | 8_1:-47407233 | Msa1197170:CDS |
| GGCATGCCTTGTTATGTTAT+CGG | 0.418487 | 8_1:+47403766 | None:intergenic |
| AGTTAGGTTTCGAAAAGGAT+TGG | 0.428937 | 8_1:-47406075 | Msa1197170:CDS |
| CTATTTGGAGATTTCTTTGG+TGG | 0.430423 | 8_1:-47404876 | Msa1197170:CDS |
| ATGGAAAGAAAATCCTTCTT+GGG | 0.431591 | 8_1:-47405803 | Msa1197170:CDS |
| GGGAGATCTGTTCAGAGAAA+TGG | 0.431670 | 8_1:-47405877 | Msa1197170:CDS |
| CAAAGTTGGAAGTTGGAAAT+GGG | 0.434923 | 8_1:+47407237 | None:intergenic |
| TATAAGCATTTCAGTTGTCT+TGG | 0.439312 | 8_1:+47404131 | None:intergenic |
| TTGCCTTCAAAGTTGGAAGT+TGG | 0.442561 | 8_1:+47407230 | None:intergenic |
| TACAATATTGAGAATTGAAA+AGG | 0.453100 | 8_1:+47407284 | None:intergenic |
| GGAGGTGGAGGGACAATGGC+TGG | 0.454095 | 8_1:+47404183 | None:intergenic |
| CTGATCCTCACCTCTACTAC+TGG | 0.459685 | 8_1:+47405769 | None:intergenic |
| ATTGTAATCTTCCTTTGTTA+CGG | 0.464373 | 8_1:+47404266 | None:intergenic |
| GAAGATCAACCACTTGCCTA+TGG | 0.466344 | 8_1:+47404908 | None:intergenic |
| AATATGTGTACAAGAGGAAA+AGG | 0.468904 | 8_1:-47404246 | Msa1197170:CDS |
| AGGAAAGCATGGTGAAAACT+TGG | 0.474837 | 8_1:-47404037 | Msa1197170:CDS |
| CAAGTTTCAAAATATTGTAA+AGG | 0.475448 | 8_1:-47406015 | Msa1197170:intron |
| TATTGAGAATTGAAAAGGTA+TGG | 0.479038 | 8_1:+47407289 | None:intergenic |
| CCTCTCAAATACCATGATAT+GGG | 0.484566 | 8_1:+47404162 | None:intergenic |
| CTCAATGTAGAAGTTGATGT+TGG | 0.487073 | 8_1:-47405281 | Msa1197170:CDS |
| AAGATAGATAAGTAAGAAGA+AGG | 0.492352 | 8_1:+47407325 | None:intergenic |
| TGAGAACTTGCCTTCAAAGT+TGG | 0.495741 | 8_1:+47407223 | None:intergenic |
| TACCATGATATGGGAGGTGG+AGG | 0.496174 | 8_1:+47404171 | None:intergenic |
| TGTTATTCGTGTTAGCTATG+AGG | 0.499997 | 8_1:+47404013 | None:intergenic |
| CAGAATCAGAGGAGGATATG+AGG | 0.500535 | 8_1:-47404085 | Msa1197170:CDS |
| TCCCTCCACCTCCCATATCA+TGG | 0.510199 | 8_1:-47404173 | Msa1197170:CDS |
| TCAATGTAGAAGTTGATGTT+GGG | 0.514333 | 8_1:-47405280 | Msa1197170:CDS |
| AAGTTCAAGCAAACCAAGAC+AGG | 0.515646 | 8_1:-47404366 | Msa1197170:CDS |
| TGAAGGAGCAAGTGCAAGCA+TGG | 0.518952 | 8_1:-47405822 | Msa1197170:CDS |
| CGAATAACATTAAAGAGAGA+TGG | 0.528311 | 8_1:-47403999 | Msa1197170:CDS |
| AAATACCATGATATGGGAGG+TGG | 0.553944 | 8_1:+47404168 | None:intergenic |
| CAACATCAACTTCTACATTG+AGG | 0.558943 | 8_1:+47405282 | None:intergenic |
| AAGTCCAAGGAAGAGATTCA+AGG | 0.560700 | 8_1:-47404057 | Msa1197170:CDS |
| TGCTTCTGAAGCTGAACTGA+AGG | 0.567738 | 8_1:-47405839 | Msa1197170:CDS |
| TCCCTTTAAACCCGTAACAA+AGG | 0.570918 | 8_1:-47404277 | Msa1197170:CDS |
| TGGCAGGTGACTGTTCCCAA+AGG | 0.575508 | 8_1:-47405317 | Msa1197170:intron |
| ATCCTCACCTCTACTACTGG+TGG | 0.584673 | 8_1:+47405772 | None:intergenic |
| TATGGGAGGTGGAGGGACAA+TGG | 0.588925 | 8_1:+47404179 | None:intergenic |
| GAAGAGATTCAAGGAAAGCA+TGG | 0.592914 | 8_1:-47404048 | Msa1197170:CDS |
| GATTACAATATGTGTACAAG+AGG | 0.593335 | 8_1:-47404252 | Msa1197170:CDS |
| AGGTTGCAAAGAGAACCTTT+GGG | 0.595888 | 8_1:+47405302 | None:intergenic |
| CTATATTATATACTGCATCA+GGG | 0.600212 | 8_1:+47405252 | None:intergenic |
| TTTATGATGGGTGAATCAGA+GGG | 0.604683 | 8_1:-47406134 | Msa1197170:CDS |
| CCCATATCATGGTATTTGAG+AGG | 0.605593 | 8_1:-47404162 | Msa1197170:CDS |
| AGTAGATTAGCAAAACATGA+AGG | 0.605643 | 8_1:-47405910 | Msa1197170:CDS |
| TGAGAATTGAAAAGGTATGG+AGG | 0.609258 | 8_1:+47407292 | None:intergenic |
| GGTGGCTTATCAACCCAAGA+AGG | 0.614982 | 8_1:+47405790 | None:intergenic |
| TATATTATATACTGCATCAG+GGG | 0.615285 | 8_1:+47405253 | None:intergenic |
| TGATAAGCCACCAGTAGTAG+AGG | 0.615534 | 8_1:-47405779 | Msa1197170:intron |
| GCAGAAACTTCCAGAATCAG+AGG | 0.615549 | 8_1:-47404096 | Msa1197170:CDS |
| TGGCTCAATGCATTCCAGTG+TGG | 0.617523 | 8_1:-47403805 | Msa1197170:three_prime_UTR |
| CAAACAATCTAAAACTACAA+TGG | 0.619354 | 8_1:+47403745 | None:intergenic |
| AAACATGAAGGAATGAATTG+GGG | 0.624768 | 8_1:-47405898 | Msa1197170:CDS |
| AAAATTTGAGGGCTGCTGGA+GGG | 0.625928 | 8_1:-47404334 | Msa1197170:CDS |
| CTCAAATACCATGATATGGG+AGG | 0.639863 | 8_1:+47404165 | None:intergenic |
| ATATGAGGCTGAAAAGTCCA+AGG | 0.654650 | 8_1:-47404070 | Msa1197170:CDS |
| ATATTATATACTGCATCAGG+GGG | 0.664252 | 8_1:+47405254 | None:intergenic |
| AACATGAAGGAATGAATTGG+GGG | 0.686683 | 8_1:-47405897 | Msa1197170:CDS |
| TGATGAGGGCCATAGGCAAG+TGG | 0.689944 | 8_1:-47404917 | Msa1197170:CDS |
| GTATCAAGAATTGACCACAC+TGG | 0.695140 | 8_1:+47403791 | None:intergenic |
| ATACATCCGATAACATAACA+AGG | 0.699983 | 8_1:-47403772 | Msa1197170:three_prime_UTR |
| GAAACTTCCAGAATCAGAGG+AGG | 0.702560 | 8_1:-47404093 | Msa1197170:CDS |
| ACCATGATATGGGAGGTGGA+GGG | 0.711287 | 8_1:+47404172 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAAAATAATAATAACAA+TGG | + | chr8_1:47404128-47404147 | None:intergenic | 10.0% |
| !!! | TTATTATTATTTTGAAAACT+TGG | - | chr8_1:47404131-47404150 | Msa1197170:CDS | 10.0% |
| !!! | AACTATTTTTATAACTTTAA+AGG | - | chr8_1:47407162-47407181 | Msa1197170:intron | 10.0% |
| !! | TATGTTATAGGTTTAAAAAT+AGG | + | chr8_1:47404651-47404670 | None:intergenic | 15.0% |
| !! | ATATTCTAGGTTTATAAAAT+AGG | + | chr8_1:47404786-47404805 | None:intergenic | 15.0% |
| !! | TTTATGAAGTTTAAATCAAT+AGG | + | chr8_1:47405598-47405617 | None:intergenic | 15.0% |
| !!! | AATTCTAATTCTTCAATTTT+AGG | + | chr8_1:47406420-47406439 | None:intergenic | 15.0% |
| !! | TACAATATTGAGAATTGAAA+AGG | + | chr8_1:47403790-47403809 | None:intergenic | 20.0% |
| !! | ATAAATTGAAGCTAACATAT+GGG | + | chr8_1:47404293-47404312 | None:intergenic | 20.0% |
| !! | AATAAATTGAAGCTAACATA+TGG | + | chr8_1:47404294-47404313 | None:intergenic | 20.0% |
| !!! | TAAAGACTTTTATATAACCA+AGG | - | chr8_1:47404420-47404439 | Msa1197170:intron | 20.0% |
| !! | TAAAACCTTGGTTTAAAAAT+GGG | + | chr8_1:47404540-47404559 | None:intergenic | 20.0% |
| !! | TTAAAACCTTGGTTTAAAAA+TGG | + | chr8_1:47404541-47404560 | None:intergenic | 20.0% |
| !!! | AACAGTTGTTATTATGTTAT+AGG | + | chr8_1:47404663-47404682 | None:intergenic | 20.0% |
| !!! | AACAGTTGTTATTATGTTAT+AGG | + | chr8_1:47404663-47404682 | None:intergenic | 20.0% |
| !! | GTTATGTATTTGTAATATGA+AGG | - | chr8_1:47404881-47404900 | Msa1197170:CDS | 20.0% |
| !!! | CATTTTTCTTAAAAAATTCC+AGG | - | chr8_1:47404912-47404931 | Msa1197170:CDS | 20.0% |
| !! | ACAAAAAATTTAGATATTGC+AGG | + | chr8_1:47405024-47405043 | None:intergenic | 20.0% |
| !! | CAAGTTTCAAAATATTGTAA+AGG | - | chr8_1:47405056-47405075 | Msa1197170:intron | 20.0% |
| !!! | CATAAATGAAGTATCTAATA+AGG | - | chr8_1:47405612-47405631 | Msa1197170:intron | 20.0% |
| !! | ATTATTTCAATTCTTCTTGA+AGG | + | chr8_1:47405689-47405708 | None:intergenic | 20.0% |
| !!! | ATTCTAAATGATGTTTTTCT+TGG | - | chr8_1:47406101-47406120 | Msa1197170:CDS | 20.0% |
| !!! | ATCCTTTTTCTTATAATGAA+TGG | - | chr8_1:47406282-47406301 | Msa1197170:intron | 20.0% |
| !! | ATCCATTCATTATAAGAAAA+AGG | + | chr8_1:47406287-47406306 | None:intergenic | 20.0% |
| !!! | ATCATACACACATTTTTTAA+CGG | - | chr8_1:47406447-47406466 | Msa1197170:intron | 20.0% |
| ! | AAGATAGATAAGTAAGAAGA+AGG | + | chr8_1:47403749-47403768 | None:intergenic | 25.0% |
| ! | TATTGAGAATTGAAAAGGTA+TGG | + | chr8_1:47403785-47403804 | None:intergenic | 25.0% |
| ! | AAATAAAACAGAAAGCAGAA+TGG | + | chr8_1:47403962-47403981 | None:intergenic | 25.0% |
| ! | GATTCAATTGAAACTATGTA+TGG | - | chr8_1:47404203-47404222 | Msa1197170:CDS | 25.0% |
| ! | TTGTGAGCAAAACATAATAA+CGG | + | chr8_1:47404261-47404280 | None:intergenic | 25.0% |
| !! | TTATTATGTTTTGCTCACAA+AGG | - | chr8_1:47404261-47404280 | Msa1197170:CDS | 25.0% |
| ! | TAAATTGAAGCTAACATATG+GGG | + | chr8_1:47404292-47404311 | None:intergenic | 25.0% |
| ! | CGTATTAACTGTATTCAATT+AGG | - | chr8_1:47404341-47404360 | Msa1197170:CDS | 25.0% |
| ! | TGTACATTGTCACAATTAAA+TGG | - | chr8_1:47404595-47404614 | Msa1197170:intron | 25.0% |
| ! | TTATAAATCACAGCTAAATG+TGG | - | chr8_1:47404732-47404751 | Msa1197170:intron | 25.0% |
| ! | TAAATTTCTCAACTTGATAG+AGG | + | chr8_1:47404814-47404833 | None:intergenic | 25.0% |
| !! | CTATCTTCAGGTAAATTTTA+AGG | + | chr8_1:47404850-47404869 | None:intergenic | 25.0% |
| !! | AAAATTCCAGGTTTTTATGA+TGG | - | chr8_1:47404924-47404943 | Msa1197170:CDS | 25.0% |
| !! | AAATTCCAGGTTTTTATGAT+GGG | - | chr8_1:47404925-47404944 | Msa1197170:CDS | 25.0% |
| !!! | ACAATATTTTGAAACTTGTG+AGG | + | chr8_1:47405054-47405073 | None:intergenic | 25.0% |
| ! | AAAACATGAAGGAATGAATT+GGG | - | chr8_1:47405172-47405191 | Msa1197170:intron | 25.0% |
| ! | TTACTGAAACAGAAGATTAT+TGG | - | chr8_1:47405363-47405382 | Msa1197170:intron | 25.0% |
| ! | TATATTATATACTGCATCAG+GGG | + | chr8_1:47405821-47405840 | None:intergenic | 25.0% |
| ! | CTATATTATATACTGCATCA+GGG | + | chr8_1:47405822-47405841 | None:intergenic | 25.0% |
| ! | ACTATATTATATACTGCATC+AGG | + | chr8_1:47405823-47405842 | None:intergenic | 25.0% |
| ! | TTGAAAACTCTTCTATTATC+AGG | + | chr8_1:47405853-47405872 | None:intergenic | 25.0% |
| !! | CACTATTTCCATTAATGTTT+TGG | - | chr8_1:47406223-47406242 | Msa1197170:intron | 25.0% |
| ! | TCAAAATTGTCCAACAAATA+TGG | + | chr8_1:47406311-47406330 | None:intergenic | 25.0% |
| !!! | ATATTTGTTGGACAATTTTG+AGG | - | chr8_1:47406310-47406329 | Msa1197170:intron | 25.0% |
| ! | TTGTAGTAACAAACAATCAA+CGG | + | chr8_1:47406581-47406600 | None:intergenic | 25.0% |
| !!! | AGATATACATCCTTTTTTGT+TGG | + | chr8_1:47406659-47406678 | None:intergenic | 25.0% |
| !!! | ATCTTACTGCTACTTAATTT+TGG | - | chr8_1:47406675-47406694 | Msa1197170:intron | 25.0% |
| ! | AGGATTCATGAAAAAATTTG+AGG | - | chr8_1:47406725-47406744 | Msa1197170:intron | 25.0% |
| ! | GGATTCATGAAAAAATTTGA+GGG | - | chr8_1:47406726-47406745 | Msa1197170:intron | 25.0% |
| ! | ATTGTAATCTTCCTTTGTTA+CGG | + | chr8_1:47406808-47406827 | None:intergenic | 25.0% |
| !!! | TTAAAGAGAGATGGATTTTA+AGG | - | chr8_1:47407081-47407100 | Msa1197170:intron | 25.0% |
| !! | CAAACAATCTAAAACTACAA+TGG | + | chr8_1:47407329-47407348 | None:intergenic | 25.0% |
| !!! | CATTGTAGTTTTAGATTGTT+TGG | - | chr8_1:47407327-47407346 | Msa1197170:CDS | 25.0% |
| !! | GTCATGCTTGTTCTAAATTT+TGG | - | chr8_1:47404010-47404029 | Msa1197170:CDS | 30.0% |
| !!! | TGATTTTTTTTCTTCATGCG+TGG | + | chr8_1:47404083-47404102 | None:intergenic | 30.0% |
| ACAATGGTTTCAGCATAATA+AGG | + | chr8_1:47404112-47404131 | None:intergenic | 30.0% | |
| GTATTCAATTAGGATTTCGA+AGG | - | chr8_1:47404351-47404370 | Msa1197170:CDS | 30.0% | |
| ! | TGCGTTCTAATTTAAAACCT+TGG | + | chr8_1:47404440-47404459 | None:intergenic | 30.0% |
| ! | TGTATCACGATTTAAAACCT+TGG | + | chr8_1:47404552-47404571 | None:intergenic | 30.0% |
| TGTGACAATGTACAATATCA+AGG | + | chr8_1:47404589-47404608 | None:intergenic | 30.0% | |
| ! | ATAAAATAGGTCTGAAATCG+TGG | + | chr8_1:47404773-47404792 | None:intergenic | 30.0% |
| GATAGAGGTAGTTATATTCT+AGG | + | chr8_1:47404799-47404818 | None:intergenic | 30.0% | |
| CTACTACTATTACTATCTTC+AGG | + | chr8_1:47404862-47404881 | None:intergenic | 30.0% | |
| !!! | CCTAACTTTTTCATTCTTTC+TGG | + | chr8_1:47404983-47405002 | None:intergenic | 30.0% |
| CCAGAAAGAATGAAAAAGTT+AGG | - | chr8_1:47404980-47404999 | Msa1197170:intron | 30.0% | |
| GAAAAAGTTAGGTTTCGAAA+AGG | - | chr8_1:47404991-47405010 | Msa1197170:intron | 30.0% | |
| AGTAGATTAGCAAAACATGA+AGG | - | chr8_1:47405161-47405180 | Msa1197170:intron | 30.0% | |
| CAAAACATGAAGGAATGAAT+TGG | - | chr8_1:47405171-47405190 | Msa1197170:intron | 30.0% | |
| AAACATGAAGGAATGAATTG+GGG | - | chr8_1:47405173-47405192 | Msa1197170:intron | 30.0% | |
| ATGGAAAGAAAATCCTTCTT+GGG | - | chr8_1:47405268-47405287 | Msa1197170:CDS | 30.0% | |
| !! | GGAATAGGATTGATTTTCTT+TGG | - | chr8_1:47405326-47405345 | Msa1197170:intron | 30.0% |
| !! | GTACTCATAAGTTTTAGTGT+CGG | - | chr8_1:47405526-47405545 | Msa1197170:intron | 30.0% |
| AAGGCATATGAAAGTTAAGT+AGG | + | chr8_1:47405670-47405689 | None:intergenic | 30.0% | |
| ! | GTCTCAGTAAATGTTTCTTT+TGG | - | chr8_1:47405734-47405753 | Msa1197170:intron | 30.0% |
| !! | TCAATGTAGAAGTTGATGTT+GGG | - | chr8_1:47405791-47405810 | Msa1197170:CDS | 30.0% |
| ATATTATATACTGCATCAGG+GGG | + | chr8_1:47405820-47405839 | None:intergenic | 30.0% | |
| ! | AAATGATGTTTTTCTTGGTC+AGG | - | chr8_1:47406106-47406125 | Msa1197170:CDS | 30.0% |
| ! | AGTGATATCCAGAAAAGTTT+TGG | - | chr8_1:47406130-47406149 | Msa1197170:CDS | 30.0% |
| !!! | AGAAAAGTTTTGGTTGATGA+GGG | - | chr8_1:47406140-47406159 | Msa1197170:CDS | 30.0% |
| TTGATCGACCAAAACATTAA+TGG | + | chr8_1:47406234-47406253 | None:intergenic | 30.0% | |
| ACAGAAATGATTACTCTGTA+AGG | - | chr8_1:47406255-47406274 | Msa1197170:intron | 30.0% | |
| ! | TGAATGGATTCCATATTTGT+TGG | - | chr8_1:47406298-47406317 | Msa1197170:intron | 30.0% |
| TACCTTTCATCCAACAAAAA+AGG | - | chr8_1:47406646-47406665 | Msa1197170:intron | 30.0% | |
| !!! | ATCCTTTTTTGTTGGATGAA+AGG | + | chr8_1:47406651-47406670 | None:intergenic | 30.0% |
| !!! | TTTTTTCATGAATCCTGTCT+TGG | + | chr8_1:47406721-47406740 | None:intergenic | 30.0% |
| TTGTAATCTTCCTTTGTTAC+GGG | + | chr8_1:47406807-47406826 | None:intergenic | 30.0% | |
| GATTACAATATGTGTACAAG+AGG | - | chr8_1:47406819-47406838 | Msa1197170:intron | 30.0% | |
| AATATGTGTACAAGAGGAAA+AGG | - | chr8_1:47406825-47406844 | Msa1197170:intron | 30.0% | |
| TATAAGCATTTCAGTTGTCT+TGG | + | chr8_1:47406943-47406962 | None:intergenic | 30.0% | |
| CGAATAACATTAAAGAGAGA+TGG | - | chr8_1:47407072-47407091 | Msa1197170:intron | 30.0% | |
| TAAAGTGATCTGAACAACTA+TGG | + | chr8_1:47407194-47407213 | None:intergenic | 30.0% | |
| AGTTGTTCAGATCACTTTAA+AGG | - | chr8_1:47407195-47407214 | Msa1197170:intron | 30.0% | |
| !!! | TGTTGATGCCACTAATTTTT+TGG | - | chr8_1:47407246-47407265 | Msa1197170:CDS | 30.0% |
| ATACATCCGATAACATAACA+AGG | - | chr8_1:47407299-47407318 | Msa1197170:CDS | 30.0% | |
| ! | TGAGAATTGAAAAGGTATGG+AGG | + | chr8_1:47403782-47403801 | None:intergenic | 35.0% |
| CAAAGTTGGAAGTTGGAAAT+GGG | + | chr8_1:47403837-47403856 | None:intergenic | 35.0% | |
| TCAAAGTTGGAAGTTGGAAA+TGG | + | chr8_1:47403838-47403857 | None:intergenic | 35.0% | |
| TTTCCAACTTCCAACTTTGA+AGG | - | chr8_1:47403838-47403857 | Msa1197170:three_prime_UTR | 35.0% | |
| !! | TCCTGAACTAACTTGTTACT+GGG | - | chr8_1:47404318-47404337 | Msa1197170:CDS | 35.0% |
| TTTGCGATGAAAAAGTCTTG+TGG | - | chr8_1:47404390-47404409 | Msa1197170:intron | 35.0% | |
| ! | ATTAGAACGCAATCGTGTTT+TGG | - | chr8_1:47404449-47404468 | Msa1197170:intron | 35.0% |
| AATCGTGGTTGAGAATGTAT+CGG | + | chr8_1:47404758-47404777 | None:intergenic | 35.0% | |
| ATTCACCCATCATAAAAACC+TGG | + | chr8_1:47404933-47404952 | None:intergenic | 35.0% | |
| !!! | TTTTATGATGGGTGAATCAG+AGG | - | chr8_1:47404936-47404955 | Msa1197170:CDS | 35.0% |
| !! | TTTATGATGGGTGAATCAGA+GGG | - | chr8_1:47404937-47404956 | Msa1197170:CDS | 35.0% |
| AGTTAGGTTTCGAAAAGGAT+TGG | - | chr8_1:47404996-47405015 | Msa1197170:intron | 35.0% | |
| ! | AAGGTTAGTCATCAATCCTA+TGG | - | chr8_1:47405075-47405094 | Msa1197170:intron | 35.0% |
| CGTACTAAACTATTAGCCAT+AGG | + | chr8_1:47405094-47405113 | None:intergenic | 35.0% | |
| AACATGAAGGAATGAATTGG+GGG | - | chr8_1:47405174-47405193 | Msa1197170:intron | 35.0% | |
| CATGGAAAGAAAATCCTTCT+TGG | - | chr8_1:47405267-47405286 | Msa1197170:CDS | 35.0% | |
| ! | CAGTAAATGTTTCTTTTGGC+AGG | - | chr8_1:47405738-47405757 | Msa1197170:intron | 35.0% |
| CAACATCAACTTCTACATTG+AGG | + | chr8_1:47405792-47405811 | None:intergenic | 35.0% | |
| !! | CTCAATGTAGAAGTTGATGT+TGG | - | chr8_1:47405790-47405809 | Msa1197170:CDS | 35.0% |
| ATAAGTCTGCTCAATGTGTT+TGG | - | chr8_1:47405903-47405922 | Msa1197170:CDS | 35.0% | |
| ! | CTCATCAACCAAAACTTTTC+TGG | + | chr8_1:47406141-47406160 | None:intergenic | 35.0% |
| !!! | CAGAAAAGTTTTGGTTGATG+AGG | - | chr8_1:47406139-47406158 | Msa1197170:CDS | 35.0% |
| CAGCTATTTGGAGATTTCTT+TGG | - | chr8_1:47406192-47406211 | Msa1197170:intron | 35.0% | |
| CTATTTGGAGATTTCTTTGG+TGG | - | chr8_1:47406195-47406214 | Msa1197170:intron | 35.0% | |
| !! | ATTTGTTTCTACGACACCAA+GGG | + | chr8_1:47406555-47406574 | None:intergenic | 35.0% |
| !! | TTGGTGTCGTAGAAACAAAT+GGG | - | chr8_1:47406555-47406574 | Msa1197170:intron | 35.0% |
| TCCTTTGTTACGGGTTTAAA+GGG | + | chr8_1:47406798-47406817 | None:intergenic | 35.0% | |
| TTCCTTTGTTACGGGTTTAA+AGG | + | chr8_1:47406799-47406818 | None:intergenic | 35.0% | |
| ACAAGAGGAAAAGGAAGAAT+TGG | - | chr8_1:47406834-47406853 | Msa1197170:intron | 35.0% | |
| CCTCTCAAATACCATGATAT+GGG | + | chr8_1:47406912-47406931 | None:intergenic | 35.0% | |
| TCCTCTCAAATACCATGATA+TGG | + | chr8_1:47406913-47406932 | None:intergenic | 35.0% | |
| TGTTATTCGTGTTAGCTATG+AGG | + | chr8_1:47407061-47407080 | None:intergenic | 35.0% | |
| GCATTGAGCCAAAAAATTAG+TGG | + | chr8_1:47407257-47407276 | None:intergenic | 35.0% | |
| TTGCCTTCAAAGTTGGAAGT+TGG | + | chr8_1:47403844-47403863 | None:intergenic | 40.0% | |
| TGAGAACTTGCCTTCAAAGT+TGG | + | chr8_1:47403851-47403870 | None:intergenic | 40.0% | |
| ATTGAATCCCTGCTAGTGAA+AGG | + | chr8_1:47404191-47404210 | None:intergenic | 40.0% | |
| !! | CTCCTGAACTAACTTGTTAC+TGG | - | chr8_1:47404317-47404336 | Msa1197170:CDS | 40.0% |
| TCTGGCATCTAAGCTGAATT+TGG | + | chr8_1:47404965-47404984 | None:intergenic | 40.0% | |
| TCTTTAACCTGTTCCTGTCT+AGG | - | chr8_1:47405421-47405440 | Msa1197170:intron | 40.0% | |
| !! | TCGTTTTAGGTCCTTGTATG+TGG | + | chr8_1:47405455-47405474 | None:intergenic | 40.0% |
| !! | AGTTTTAGTGTCGGACACTT+AGG | - | chr8_1:47405535-47405554 | Msa1197170:intron | 40.0% |
| ! | ACACTGACAATCTGAAGTGT+CGG | - | chr8_1:47405559-47405578 | Msa1197170:intron | 40.0% |
| AGGTTGCAAAGAGAACCTTT+GGG | + | chr8_1:47405772-47405791 | None:intergenic | 40.0% | |
| ATCTTCAGCAAGCAGCTATT+TGG | - | chr8_1:47406180-47406199 | Msa1197170:intron | 40.0% | |
| CACCTCTCTTATAAGACTCT+TGG | - | chr8_1:47406348-47406367 | Msa1197170:intron | 40.0% | |
| ! | GTCCAAGAGTCTTATAAGAG+AGG | + | chr8_1:47406353-47406372 | None:intergenic | 40.0% |
| !!! | CACACATTTTTTAACGGCGA+AGG | - | chr8_1:47406453-47406472 | Msa1197170:intron | 40.0% |
| !! | CATTTGTTTCTACGACACCA+AGG | + | chr8_1:47406556-47406575 | None:intergenic | 40.0% |
| !! | CTTGGTGTCGTAGAAACAAA+TGG | - | chr8_1:47406554-47406573 | Msa1197170:intron | 40.0% |
| AAGTTCAAGCAAACCAAGAC+AGG | - | chr8_1:47406705-47406724 | Msa1197170:intron | 40.0% | |
| TGAAAAAATTTGAGGGCTGC+TGG | - | chr8_1:47406733-47406752 | Msa1197170:intron | 40.0% | |
| GTTGCTTCGTCGACAAATAA+AGG | + | chr8_1:47406768-47406787 | None:intergenic | 40.0% | |
| TCCCTTTAAACCCGTAACAA+AGG | - | chr8_1:47406794-47406813 | Msa1197170:intron | 40.0% | |
| AAATACCATGATATGGGAGG+TGG | + | chr8_1:47406906-47406925 | None:intergenic | 40.0% | |
| CTCAAATACCATGATATGGG+AGG | + | chr8_1:47406909-47406928 | None:intergenic | 40.0% | |
| CCCATATCATGGTATTTGAG+AGG | - | chr8_1:47406909-47406928 | Msa1197170:intron | 40.0% | |
| ATATGAGGCTGAAAAGTCCA+AGG | - | chr8_1:47407001-47407020 | Msa1197170:intron | 40.0% | |
| AAGTCCAAGGAAGAGATTCA+AGG | - | chr8_1:47407014-47407033 | Msa1197170:intron | 40.0% | |
| CTTTCCTTGAATCTCTTCCT+TGG | + | chr8_1:47407021-47407040 | None:intergenic | 40.0% | |
| GAAGAGATTCAAGGAAAGCA+TGG | - | chr8_1:47407023-47407042 | Msa1197170:intron | 40.0% | |
| ! | AGGAAAGCATGGTGAAAACT+TGG | - | chr8_1:47407034-47407053 | Msa1197170:intron | 40.0% |
| GTATCAAGAATTGACCACAC+TGG | + | chr8_1:47407283-47407302 | None:intergenic | 40.0% | |
| ! | GGCATGCCTTGTTATGTTAT+CGG | + | chr8_1:47407308-47407327 | None:intergenic | 40.0% |
| GGTATCCTGACTGACTAATC+CGG | - | chr8_1:47404152-47404171 | Msa1197170:CDS | 45.0% | |
| GTATCCTGACTGACTAATCC+GGG | - | chr8_1:47404153-47404172 | Msa1197170:CDS | 45.0% | |
| TATCCTGACTGACTAATCCG+GGG | - | chr8_1:47404154-47404173 | Msa1197170:CDS | 45.0% | |
| AATCCCACCTTTCACTAGCA+GGG | - | chr8_1:47404181-47404200 | Msa1197170:CDS | 45.0% | |
| AATCCCTGCTAGTGAAAGGT+GGG | + | chr8_1:47404187-47404206 | None:intergenic | 45.0% | |
| TAACAATTCCCGTGTTGGGT+CGG | + | chr8_1:47404230-47404249 | None:intergenic | 45.0% | |
| AGCCTAACAATTCCCGTGTT+GGG | + | chr8_1:47404234-47404253 | None:intergenic | 45.0% | |
| TAGCCTAACAATTCCCGTGT+TGG | + | chr8_1:47404235-47404254 | None:intergenic | 45.0% | |
| GCCCAGTAACAAGTTAGTTC+AGG | + | chr8_1:47404322-47404341 | None:intergenic | 45.0% | |
| !! | GCAGGCCCATTTTTAAACCA+AGG | - | chr8_1:47404532-47404551 | Msa1197170:intron | 45.0% |
| GGGAGATCTGTTCAGAGAAA+TGG | - | chr8_1:47405194-47405213 | Msa1197170:intron | 45.0% | |
| !! | TGCTTCTGAAGCTGAACTGA+AGG | - | chr8_1:47405232-47405251 | Msa1197170:CDS | 45.0% |
| TGATAAGCCACCAGTAGTAG+AGG | - | chr8_1:47405292-47405311 | Msa1197170:CDS | 45.0% | |
| GAGGTTGCAAAGAGAACCTT+TGG | + | chr8_1:47405773-47405792 | None:intergenic | 45.0% | |
| !!! | TTTTGGTTGATGAGGGCCAT+AGG | - | chr8_1:47406147-47406166 | Msa1197170:intron | 45.0% |
| GAAGATCAACCACTTGCCTA+TGG | + | chr8_1:47406166-47406185 | None:intergenic | 45.0% | |
| ! | TGGAGATTTCTTTGGTGGTC+TGG | - | chr8_1:47406200-47406219 | Msa1197170:intron | 45.0% |
| AAAAATTTGAGGGCTGCTGG+AGG | - | chr8_1:47406736-47406755 | Msa1197170:intron | 45.0% | |
| AAAATTTGAGGGCTGCTGGA+GGG | - | chr8_1:47406737-47406756 | Msa1197170:intron | 45.0% | |
| GCAGAAACTTCCAGAATCAG+AGG | - | chr8_1:47406975-47406994 | Msa1197170:intron | 45.0% | |
| GAAACTTCCAGAATCAGAGG+AGG | - | chr8_1:47406978-47406997 | Msa1197170:intron | 45.0% | |
| CTCATATCCTCCTCTGATTC+TGG | + | chr8_1:47406988-47407007 | None:intergenic | 45.0% | |
| CAGAATCAGAGGAGGATATG+AGG | - | chr8_1:47406986-47407005 | Msa1197170:intron | 45.0% | |
| ATCCTGACTGACTAATCCGG+GGG | - | chr8_1:47404155-47404174 | Msa1197170:CDS | 50.0% | |
| CTGCTAGTGAAAGGTGGGAT+TGG | + | chr8_1:47404182-47404201 | None:intergenic | 50.0% | |
| CAATCCCACCTTTCACTAGC+AGG | - | chr8_1:47404180-47404199 | Msa1197170:CDS | 50.0% | |
| GAATCCCTGCTAGTGAAAGG+TGG | + | chr8_1:47404188-47404207 | None:intergenic | 50.0% | |
| ATGTATGGACCGACCCAACA+CGG | - | chr8_1:47404218-47404237 | Msa1197170:CDS | 50.0% | |
| GACCCAACACGGGAATTGTT+AGG | - | chr8_1:47404229-47404248 | Msa1197170:CDS | 50.0% | |
| GCAGCCTCAACAATGATTGC+AGG | - | chr8_1:47404514-47404533 | Msa1197170:intron | 50.0% | |
| TGGGCCTGCAATCATTGTTG+AGG | + | chr8_1:47404521-47404540 | None:intergenic | 50.0% | |
| GAGCTGATGCAGTCTCAACT+GGG | - | chr8_1:47404617-47404636 | Msa1197170:intron | 50.0% | |
| TGAAGGAGCAAGTGCAAGCA+TGG | - | chr8_1:47405249-47405268 | Msa1197170:CDS | 50.0% | |
| GGTGGCTTATCAACCCAAGA+AGG | + | chr8_1:47405284-47405303 | None:intergenic | 50.0% | |
| ATCCTCACCTCTACTACTGG+TGG | + | chr8_1:47405302-47405321 | None:intergenic | 50.0% | |
| CTGATCCTCACCTCTACTAC+TGG | + | chr8_1:47405305-47405324 | None:intergenic | 50.0% | |
| GTAGTAGAGGTGAGGATCAG+TGG | - | chr8_1:47405305-47405324 | Msa1197170:CDS | 50.0% | |
| GAGGTGAGGATCAGTGGAAT+AGG | - | chr8_1:47405311-47405330 | Msa1197170:CDS | 50.0% | |
| AGTGCTTCCTAGACAGGAAC+AGG | + | chr8_1:47405431-47405450 | None:intergenic | 50.0% | |
| !! | AGGAAGCACTGCCACATACA+AGG | - | chr8_1:47405441-47405460 | Msa1197170:intron | 50.0% |
| !!! | CTGCGTGTCTGTGTCGTTTT+AGG | + | chr8_1:47405468-47405487 | None:intergenic | 50.0% |
| CTAAAACGACACAGACACGC+AGG | - | chr8_1:47405466-47405485 | Msa1197170:intron | 50.0% | |
| ACCATGATATGGGAGGTGGA+GGG | + | chr8_1:47406902-47406921 | None:intergenic | 50.0% | |
| TACCATGATATGGGAGGTGG+AGG | + | chr8_1:47406903-47406922 | None:intergenic | 50.0% | |
| TGGCTCAATGCATTCCAGTG+TGG | - | chr8_1:47407266-47407285 | Msa1197170:CDS | 50.0% | |
| TGTATGGACCGACCCAACAC+GGG | - | chr8_1:47404219-47404238 | Msa1197170:CDS | 55.0% | |
| GGAGCTGATGCAGTCTCAAC+TGG | - | chr8_1:47404616-47404635 | Msa1197170:intron | 55.0% | |
| AGCCACCAGTAGTAGAGGTG+AGG | - | chr8_1:47405297-47405316 | Msa1197170:CDS | 55.0% | |
| TGTGGCAGTGCTTCCTAGAC+AGG | + | chr8_1:47405437-47405456 | None:intergenic | 55.0% | |
| !! | CTGAAGTGTCGGCGCTACAT+AGG | - | chr8_1:47405570-47405589 | Msa1197170:intron | 55.0% |
| TGGCAGGTGACTGTTCCCAA+AGG | - | chr8_1:47405754-47405773 | Msa1197170:intron | 55.0% | |
| TGATGAGGGCCATAGGCAAG+TGG | - | chr8_1:47406154-47406173 | Msa1197170:intron | 55.0% | |
| CCAAGGGACGATGTGGTGAT+TGG | + | chr8_1:47406539-47406558 | None:intergenic | 55.0% | |
| CCAATCACCACATCGTCCCT+TGG | - | chr8_1:47406536-47406555 | Msa1197170:intron | 55.0% | |
| TACGACACCAAGGGACGATG+TGG | + | chr8_1:47406546-47406565 | None:intergenic | 55.0% | |
| TATGGGAGGTGGAGGGACAA+TGG | + | chr8_1:47406895-47406914 | None:intergenic | 55.0% | |
| TCCCTCCACCTCCCATATCA+TGG | - | chr8_1:47406898-47406917 | Msa1197170:intron | 55.0% | |
| !! | GTCCCCCGGATTAGTCAGTC+AGG | + | chr8_1:47404160-47404179 | None:intergenic | 60.0% |
| !! | GAAAGGTGGGATTGGTCCCC+CGG | + | chr8_1:47404174-47404193 | None:intergenic | 60.0% |
| ACGACACAGACACGCAGGCA+TGG | - | chr8_1:47405471-47405490 | Msa1197170:intron | 60.0% | |
| CGACACAGACACGCAGGCAT+GGG | - | chr8_1:47405472-47405491 | Msa1197170:intron | 60.0% | |
| GGAGGTGGAGGGACAATGGC+TGG | + | chr8_1:47406891-47406910 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 47403737 | 47407356 | 47403737 | ID=Msa1197170;Name=Msa1197170 |
| chr8_1 | mRNA | 47403737 | 47407356 | 47403737 | ID=Msa1197170-mRNA-1;Parent=Msa1197170;Name=Msa1197170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.8|0.83|1|0.8|0.66|6|208|392 |
| chr8_1 | exon | 47403737 | 47404391 | 47403737 | ID=Msa1197170-mRNA-1:exon:15022;Parent=Msa1197170-mRNA-1 |
| chr8_1 | exon | 47404822 | 47404965 | 47404822 | ID=Msa1197170-mRNA-1:exon:15021;Parent=Msa1197170-mRNA-1 |
| chr8_1 | exon | 47405211 | 47405333 | 47405211 | ID=Msa1197170-mRNA-1:exon:15020;Parent=Msa1197170-mRNA-1 |
| chr8_1 | exon | 47405780 | 47405941 | 47405780 | ID=Msa1197170-mRNA-1:exon:15019;Parent=Msa1197170-mRNA-1 |
| chr8_1 | exon | 47406016 | 47406159 | 47406016 | ID=Msa1197170-mRNA-1:exon:15018;Parent=Msa1197170-mRNA-1 |
| chr8_1 | exon | 47407198 | 47407356 | 47407198 | ID=Msa1197170-mRNA-1:exon:15017;Parent=Msa1197170-mRNA-1 |
| chr8_1 | CDS | 47407198 | 47407356 | 47407198 | ID=Msa1197170-mRNA-1:cds;Parent=Msa1197170-mRNA-1 |
| chr8_1 | CDS | 47406016 | 47406159 | 47406016 | ID=Msa1197170-mRNA-1:cds;Parent=Msa1197170-mRNA-1 |
| chr8_1 | CDS | 47405780 | 47405941 | 47405780 | ID=Msa1197170-mRNA-1:cds;Parent=Msa1197170-mRNA-1 |
| chr8_1 | CDS | 47405211 | 47405333 | 47405211 | ID=Msa1197170-mRNA-1:cds;Parent=Msa1197170-mRNA-1 |
| chr8_1 | CDS | 47404822 | 47404965 | 47404822 | ID=Msa1197170-mRNA-1:cds;Parent=Msa1197170-mRNA-1 |
| chr8_1 | CDS | 47403945 | 47404391 | 47403945 | ID=Msa1197170-mRNA-1:cds;Parent=Msa1197170-mRNA-1 |
| chr8_1 | three_prime_UTR | 47403737 | 47403944 | 47403737 | ID=Msa1197170-mRNA-1:three_prime_utr;Parent=Msa1197170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
