Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291350 | A0A072TS56 | 97.626 | 337 | 8 | 0 | 1 | 337 | 50 | 386 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1291350 | -0.828575 | 8.330032e-55 | -8.615850e-47 |
| Msa0032610 | Msa1291350 | 0.824043 | 9.995634e-54 | -8.615850e-47 |
| Msa0044710 | Msa1291350 | 0.800639 | 1.311632e-48 | -8.615850e-47 |
| Msa0085360 | Msa1291350 | -0.805687 | 1.183350e-49 | -8.615850e-47 |
| Msa0090030 | Msa1291350 | 0.803098 | 4.099612e-49 | -8.615850e-47 |
| Msa0094920 | Msa1291350 | 0.814314 | 1.641186e-51 | -8.615850e-47 |
| Msa0099510 | Msa1291350 | 0.812743 | 3.635470e-51 | -8.615850e-47 |
| Msa0609970 | Msa1291350 | 0.825664 | 4.142777e-54 | -8.615850e-47 |
| Msa0618010 | Msa1291350 | 0.804782 | 1.830860e-49 | -8.615850e-47 |
| Msa0619070 | Msa1291350 | 0.809140 | 2.191958e-50 | -8.615850e-47 |
| Msa0626680 | Msa1291350 | 0.812951 | 3.273587e-51 | -8.615850e-47 |
| Msa0638280 | Msa1291350 | 0.843797 | 1.123668e-58 | -8.615850e-47 |
| Msa0638320 | Msa1291350 | 0.834605 | 2.720602e-56 | -8.615850e-47 |
| Msa0643250 | Msa1291350 | 0.838393 | 2.954242e-57 | -8.615850e-47 |
| Msa0650620 | Msa1291350 | 0.803241 | 3.828534e-49 | -8.615850e-47 |
| Msa0664760 | Msa1291350 | 0.821522 | 3.861506e-53 | -8.615850e-47 |
| Msa0669850 | Msa1291350 | 0.818298 | 2.109071e-52 | -8.615850e-47 |
| Msa0677270 | Msa1291350 | 0.838228 | 3.257008e-57 | -8.615850e-47 |
| Msa0682950 | Msa1291350 | 0.836817 | 7.494146e-57 | -8.615850e-47 |
| Msa0694250 | Msa1291350 | 0.811001 | 8.707395e-51 | -8.615850e-47 |
| Msa0715110 | Msa1291350 | 0.805360 | 1.386325e-49 | -8.615850e-47 |
| Msa0724830 | Msa1291350 | 0.810107 | 1.358655e-50 | -8.615850e-47 |
| Msa0743260 | Msa1291350 | 0.815184 | 1.052634e-51 | -8.615850e-47 |
| Msa0754680 | Msa1291350 | 0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0754720 | Msa1291350 | -0.815461 | 9.135438e-52 | -8.615850e-47 |
| Msa0760380 | Msa1291350 | 0.803506 | 3.373970e-49 | -8.615850e-47 |
| Msa0789270 | Msa1291350 | 0.801274 | 9.726069e-49 | -8.615850e-47 |
| Msa0790390 | Msa1291350 | -0.833022 | 6.768226e-56 | -8.615850e-47 |
| Msa0148120 | Msa1291350 | 0.821097 | 4.838808e-53 | -8.615850e-47 |
| Msa0156650 | Msa1291350 | -0.817279 | 3.581534e-52 | -8.615850e-47 |
| Msa0165970 | Msa1291350 | 0.812980 | 3.226351e-51 | -8.615850e-47 |
| Msa0169620 | Msa1291350 | 0.819196 | 1.318283e-52 | -8.615850e-47 |
| Msa0172350 | Msa1291350 | 0.802699 | 4.957120e-49 | -8.615850e-47 |
| Msa0173740 | Msa1291350 | 0.805635 | 1.213724e-49 | -8.615850e-47 |
| Msa0173820 | Msa1291350 | 0.804348 | 2.255871e-49 | -8.615850e-47 |
| Msa0173990 | Msa1291350 | 0.807414 | 5.113344e-50 | -8.615850e-47 |
| Msa0188630 | Msa1291350 | 0.816947 | 4.251317e-52 | -8.615850e-47 |
| Msa0188680 | Msa1291350 | -0.834710 | 2.560446e-56 | -8.615850e-47 |
| Msa0196020 | Msa1291350 | -0.819484 | 1.133661e-52 | -8.615850e-47 |
| Msa0208810 | Msa1291350 | 0.824302 | 8.690090e-54 | -8.615850e-47 |
| Msa0215470 | Msa1291350 | 0.804320 | 2.285730e-49 | -8.615850e-47 |
| Msa0223100 | Msa1291350 | 0.815973 | 7.026033e-52 | -8.615850e-47 |
| Msa0223290 | Msa1291350 | 0.833990 | 3.882410e-56 | -8.615850e-47 |
| Msa0223380 | Msa1291350 | 0.828243 | 1.002054e-54 | -8.615850e-47 |
| Msa0227510 | Msa1291350 | 0.805089 | 1.579419e-49 | -8.615850e-47 |
| Msa1245940 | Msa1291350 | -0.803321 | 3.686406e-49 | -8.615850e-47 |
| Msa1249920 | Msa1291350 | 0.947596 | 4.942724e-106 | -8.615850e-47 |
| Msa1259070 | Msa1291350 | -0.800826 | 1.201305e-48 | -8.615850e-47 |
| Msa1291350 | Msa1300860 | 0.849629 | 2.860286e-60 | -8.615850e-47 |
| Msa1291350 | Msa1331920 | 0.810989 | 8.762197e-51 | -8.615850e-47 |
| Msa1291350 | Msa1350690 | 0.806246 | 9.026976e-50 | -8.615850e-47 |
| Msa1291350 | Msa1360890 | -0.806647 | 7.430974e-50 | -8.615850e-47 |
| Msa1291350 | Msa1362510 | 0.810476 | 1.131259e-50 | -8.615850e-47 |
| Msa1291350 | Msa1403530 | -0.802260 | 6.103306e-49 | -8.615850e-47 |
| Msa1291350 | Msa1403580 | -0.833837 | 4.238707e-56 | -8.615850e-47 |
| Msa1291350 | Msa1403930 | -0.845857 | 3.126481e-59 | -8.615850e-47 |
| Msa1291350 | Msa1409350 | 0.803694 | 3.085452e-49 | -8.615850e-47 |
| Msa1291350 | Msa1439960 | 0.818659 | 1.746465e-52 | -8.615850e-47 |
| Msa1291350 | Msa1442220 | -0.830579 | 2.712469e-55 | -8.615850e-47 |
| Msa1291350 | Msa1443290 | -0.829803 | 4.195506e-55 | -8.615850e-47 |
| Msa1291350 | Msa1466090 | 0.810200 | 1.297120e-50 | -8.615850e-47 |
| Msa0365490 | Msa1291350 | 0.819933 | 8.954003e-53 | -8.615850e-47 |
| Msa0372660 | Msa1291350 | 0.801138 | 1.037090e-48 | -8.615850e-47 |
| Msa0372670 | Msa1291350 | 0.808289 | 3.332817e-50 | -8.615850e-47 |
| Msa0377530 | Msa1291350 | 0.816794 | 4.602672e-52 | -8.615850e-47 |
| Msa0380040 | Msa1291350 | 0.833089 | 6.514294e-56 | -8.615850e-47 |
| Msa0388030 | Msa1291350 | -0.802985 | 4.326941e-49 | -8.615850e-47 |
| Msa0393950 | Msa1291350 | 0.808482 | 3.031362e-50 | -8.615850e-47 |
| Msa0404700 | Msa1291350 | 0.801658 | 8.117193e-49 | -8.615850e-47 |
| Msa0414950 | Msa1291350 | -0.823959 | 1.045843e-53 | -8.615850e-47 |
| Msa0420000 | Msa1291350 | 0.804650 | 1.951386e-49 | -8.615850e-47 |
| Msa0421780 | Msa1291350 | -0.819903 | 9.092872e-53 | -8.615850e-47 |
| Msa0423360 | Msa1291350 | -0.820029 | 8.509204e-53 | -8.615850e-47 |
| Msa0427200 | Msa1291350 | 0.802506 | 5.433150e-49 | -8.615850e-47 |
| Msa0429290 | Msa1291350 | 0.821463 | 3.984844e-53 | -8.615850e-47 |
| Msa0460930 | Msa1291350 | 0.819913 | 9.045776e-53 | -8.615850e-47 |
| Msa0462540 | Msa1291350 | 0.808417 | 3.129917e-50 | -8.615850e-47 |
| Msa0464900 | Msa1291350 | 0.839092 | 1.948328e-57 | -8.615850e-47 |
| Msa0465480 | Msa1291350 | -0.813049 | 3.115470e-51 | -8.615850e-47 |
| Msa0467900 | Msa1291350 | -0.812320 | 4.498785e-51 | -8.615850e-47 |
| Msa0467960 | Msa1291350 | -0.812482 | 4.145753e-51 | -8.615850e-47 |
| Msa0469790 | Msa1291350 | 0.810828 | 9.492824e-51 | -8.615850e-47 |
| Msa0469910 | Msa1291350 | -0.843478 | 1.367486e-58 | -8.615850e-47 |
| Msa0474590 | Msa1291350 | 0.800608 | 1.330795e-48 | -8.615850e-47 |
| Msa0475580 | Msa1291350 | 0.823378 | 1.430232e-53 | -8.615850e-47 |
| Msa0480320 | Msa1291350 | 0.844926 | 5.584427e-59 | -8.615850e-47 |
| Msa0993530 | Msa1291350 | 0.817114 | 3.900979e-52 | -8.615850e-47 |
| Msa1015060 | Msa1291350 | 0.825517 | 4.489689e-54 | -8.615850e-47 |
| Msa1037700 | Msa1291350 | -0.812193 | 4.795781e-51 | -8.615850e-47 |
| Msa1040890 | Msa1291350 | 0.827853 | 1.243355e-54 | -8.615850e-47 |
| Msa1047400 | Msa1291350 | 0.808259 | 3.381683e-50 | -8.615850e-47 |
| Msa1072460 | Msa1291350 | -0.804145 | 2.486600e-49 | -8.615850e-47 |
| Msa1079370 | Msa1291350 | -0.809442 | 1.888427e-50 | -8.615850e-47 |
| Msa1082700 | Msa1291350 | 0.801128 | 1.042044e-48 | -8.615850e-47 |
| Msa1083210 | Msa1291350 | 0.824219 | 9.089906e-54 | -8.615850e-47 |
| Msa1087470 | Msa1291350 | 0.803672 | 3.117124e-49 | -8.615850e-47 |
| Msa1092820 | Msa1291350 | 0.802775 | 4.779377e-49 | -8.615850e-47 |
| Msa0242680 | Msa1291350 | 0.816100 | 6.582066e-52 | -8.615850e-47 |
| Msa0260210 | Msa1291350 | 0.807999 | 3.842192e-50 | -8.615850e-47 |
| Msa0266210 | Msa1291350 | 0.817118 | 3.892215e-52 | -8.615850e-47 |
| Msa0270170 | Msa1291350 | -0.818251 | 2.160939e-52 | -8.615850e-47 |
| Msa0270220 | Msa1291350 | -0.831404 | 1.701746e-55 | -8.615850e-47 |
| Msa0275400 | Msa1291350 | -0.834264 | 3.313622e-56 | -8.615850e-47 |
| Msa0276920 | Msa1291350 | 0.815188 | 1.050822e-51 | -8.615850e-47 |
| Msa0282850 | Msa1291350 | 0.806918 | 6.515071e-50 | -8.615850e-47 |
| Msa0287670 | Msa1291350 | 0.807490 | 4.928216e-50 | -8.615850e-47 |
| Msa0288240 | Msa1291350 | 0.812340 | 4.453434e-51 | -8.615850e-47 |
| Msa0288730 | Msa1291350 | 0.807029 | 6.171364e-50 | -8.615850e-47 |
| Msa0302650 | Msa1291350 | 0.840778 | 7.082495e-58 | -8.615850e-47 |
| Msa0304290 | Msa1291350 | 0.812908 | 3.345378e-51 | -8.615850e-47 |
| Msa0304330 | Msa1291350 | 0.819607 | 1.062481e-52 | -8.615850e-47 |
| Msa0305890 | Msa1291350 | 0.800585 | 1.345037e-48 | -8.615850e-47 |
| Msa0307830 | Msa1291350 | -0.828944 | 6.782421e-55 | -8.615850e-47 |
| Msa0310410 | Msa1291350 | 0.801162 | 1.025488e-48 | -8.615850e-47 |
| Msa0315240 | Msa1291350 | 0.834899 | 2.295266e-56 | -8.615850e-47 |
| Msa0320100 | Msa1291350 | 0.831260 | 1.845919e-55 | -8.615850e-47 |
| Msa0328210 | Msa1291350 | 0.808297 | 3.319545e-50 | -8.615850e-47 |
| Msa0333720 | Msa1291350 | -0.809445 | 1.886077e-50 | -8.615850e-47 |
| Msa0334350 | Msa1291350 | 0.830828 | 2.357355e-55 | -8.615850e-47 |
| Msa0335040 | Msa1291350 | 0.814508 | 1.486700e-51 | -8.615850e-47 |
| Msa0344870 | Msa1291350 | 0.808555 | 2.923565e-50 | -8.615850e-47 |
| Msa0356890 | Msa1291350 | -0.814794 | 1.285185e-51 | -8.615850e-47 |
| Msa0363170 | Msa1291350 | 0.805691 | 1.181170e-49 | -8.615850e-47 |
| Msa1111700 | Msa1291350 | 0.809911 | 1.497025e-50 | -8.615850e-47 |
| Msa1113200 | Msa1291350 | 0.824365 | 8.397967e-54 | -8.615850e-47 |
| Msa1124310 | Msa1291350 | 0.817717 | 2.852796e-52 | -8.615850e-47 |
| Msa1127830 | Msa1291350 | 0.825784 | 3.880697e-54 | -8.615850e-47 |
| Msa1130210 | Msa1291350 | -0.832771 | 7.817694e-56 | -8.615850e-47 |
| Msa1171770 | Msa1291350 | -0.803047 | 4.199152e-49 | -8.615850e-47 |
| Msa1193950 | Msa1291350 | -0.854535 | 1.153817e-61 | -8.615850e-47 |
| Msa1197170 | Msa1291350 | 0.872611 | 2.783424e-67 | -8.615850e-47 |
| Msa1208890 | Msa1291350 | -0.806829 | 6.803502e-50 | -8.615850e-47 |
| Msa1217860 | Msa1291350 | 0.814796 | 1.283534e-51 | -8.615850e-47 |
| Msa1219110 | Msa1291350 | 0.944305 | 2.486721e-103 | -8.615850e-47 |
| Msa1219520 | Msa1291350 | 0.802939 | 4.422621e-49 | -8.615850e-47 |
| Msa0490350 | Msa1291350 | 0.806312 | 8.743873e-50 | -8.615850e-47 |
| Msa0491520 | Msa1291350 | 0.808509 | 2.990657e-50 | -8.615850e-47 |
| Msa0505060 | Msa1291350 | 0.864354 | 1.291584e-64 | -8.615850e-47 |
| Msa0506890 | Msa1291350 | 0.802333 | 5.897959e-49 | -8.615850e-47 |
| Msa0508200 | Msa1291350 | 0.814577 | 1.435236e-51 | -8.615850e-47 |
| Msa0516320 | Msa1291350 | 0.800370 | 1.488053e-48 | -8.615850e-47 |
| Msa0517490 | Msa1291350 | 0.816425 | 5.567300e-52 | -8.615850e-47 |
| Msa0519220 | Msa1291350 | 0.833351 | 5.605566e-56 | -8.615850e-47 |
| Msa0526890 | Msa1291350 | 0.827620 | 1.414436e-54 | -8.615850e-47 |
| Msa0529950 | Msa1291350 | 0.817233 | 3.667823e-52 | -8.615850e-47 |
| Msa0530380 | Msa1291350 | 0.807169 | 5.764065e-50 | -8.615850e-47 |
| Msa0535030 | Msa1291350 | 0.815258 | 1.013938e-51 | -8.615850e-47 |
| Msa0535060 | Msa1291350 | 0.818770 | 1.648118e-52 | -8.615850e-47 |
| Msa0535450 | Msa1291350 | 0.811759 | 5.960239e-51 | -8.615850e-47 |
| Msa0542160 | Msa1291350 | 0.814636 | 1.392577e-51 | -8.615850e-47 |
| Msa0547400 | Msa1291350 | 0.838057 | 3.604763e-57 | -8.615850e-47 |
| Msa0578090 | Msa1291350 | 0.808114 | 3.631371e-50 | -8.615850e-47 |
| Msa0579290 | Msa1291350 | 0.811848 | 5.703039e-51 | -8.615850e-47 |
| Msa0579340 | Msa1291350 | 0.804862 | 1.762210e-49 | -8.615850e-47 |
| Msa0579390 | Msa1291350 | 0.807726 | 4.390978e-50 | -8.615850e-47 |
| Msa0581920 | Msa1291350 | 0.833089 | 6.516333e-56 | -8.615850e-47 |
| Msa0586850 | Msa1291350 | 0.807330 | 5.329572e-50 | -8.615850e-47 |
| Msa0591770 | Msa1291350 | 0.827360 | 1.633211e-54 | -8.615850e-47 |
| Msa0602120 | Msa1291350 | 0.843287 | 1.537669e-58 | -8.615850e-47 |
| Msa0863370 | Msa1291350 | 0.810704 | 1.009759e-50 | -8.615850e-47 |
| Msa0874500 | Msa1291350 | 0.819072 | 1.407415e-52 | -8.615850e-47 |
| Msa0874570 | Msa1291350 | 0.805589 | 1.240699e-49 | -8.615850e-47 |
| Msa0881030 | Msa1291350 | 0.804971 | 1.672116e-49 | -8.615850e-47 |
| Msa0893810 | Msa1291350 | 0.800815 | 1.207223e-48 | -8.615850e-47 |
| Msa0908170 | Msa1291350 | 0.827444 | 1.559465e-54 | -8.615850e-47 |
| Msa0909000 | Msa1291350 | -0.802352 | 5.842978e-49 | -8.615850e-47 |
| Msa0959010 | Msa1291350 | 0.808560 | 2.916333e-50 | -8.615850e-47 |
| Msa0970420 | Msa1291350 | 0.803869 | 2.837246e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291350 | MtrunA17_Chr8g0365771 | 97.626 | 337 | 8 | 0 | 1 | 337 | 50 | 386 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291350 | AT1G70480.2 | 59.006 | 322 | 117 | 6 | 2 | 320 | 14 | 323 | 5.31e-127 | 367 |
| Msa1291350 | AT1G70480.1 | 60.129 | 311 | 109 | 6 | 13 | 320 | 7 | 305 | 1.94e-126 | 365 |
| Msa1291350 | AT1G23560.1 | 50.775 | 258 | 126 | 1 | 33 | 289 | 30 | 287 | 2.77e-94 | 284 |
| Msa1291350 | AT1G23560.2 | 50.775 | 258 | 126 | 1 | 33 | 289 | 30 | 287 | 2.77e-94 | 284 |
| Msa1291350 | AT1G23600.1 | 38.750 | 240 | 130 | 7 | 63 | 287 | 28 | 265 | 1.05e-52 | 175 |
| Msa1291350 | AT1G23690.1 | 40.367 | 218 | 117 | 5 | 71 | 276 | 44 | 260 | 1.68e-52 | 174 |
| Msa1291350 | AT1G23520.1 | 40.090 | 222 | 121 | 6 | 78 | 288 | 42 | 262 | 2.28e-51 | 171 |
| Msa1291350 | AT1G23690.2 | 38.532 | 218 | 116 | 5 | 71 | 276 | 44 | 255 | 4.90e-49 | 165 |
| Msa1291350 | AT1G23520.4 | 39.189 | 222 | 117 | 7 | 78 | 288 | 42 | 256 | 1.29e-47 | 161 |
| Msa1291350 | AT1G23670.2 | 40.598 | 234 | 123 | 8 | 69 | 288 | 32 | 263 | 1.16e-46 | 159 |
| Msa1291350 | AT1G23640.1 | 39.013 | 223 | 122 | 6 | 77 | 287 | 42 | 262 | 1.16e-46 | 159 |
| Msa1291350 | AT1G23660.1 | 37.557 | 221 | 126 | 5 | 78 | 287 | 43 | 262 | 1.25e-45 | 156 |
| Msa1291350 | AT1G23690.4 | 40.000 | 175 | 96 | 3 | 111 | 276 | 1 | 175 | 1.93e-42 | 145 |
| Msa1291350 | AT2G27670.1 | 35.776 | 232 | 136 | 5 | 60 | 279 | 49 | 279 | 2.83e-41 | 146 |
| Msa1291350 | AT1G23645.1 | 45.395 | 152 | 77 | 3 | 140 | 287 | 75 | 224 | 7.65e-39 | 137 |
| Msa1291350 | AT1G23590.1 | 39.362 | 188 | 96 | 5 | 76 | 250 | 29 | 211 | 4.86e-38 | 135 |
| Msa1291350 | AT1G23590.2 | 39.362 | 188 | 96 | 5 | 76 | 250 | 7 | 189 | 8.74e-38 | 134 |
| Msa1291350 | AT1G23600.2 | 42.667 | 150 | 84 | 2 | 140 | 287 | 70 | 219 | 1.18e-37 | 134 |
| Msa1291350 | AT1G23670.1 | 43.506 | 154 | 82 | 4 | 140 | 288 | 65 | 218 | 1.61e-33 | 123 |
| Msa1291350 | AT1G23570.3 | 42.361 | 144 | 77 | 3 | 140 | 279 | 1 | 142 | 6.54e-33 | 121 |
| Msa1291350 | AT1G23690.3 | 33.649 | 211 | 93 | 6 | 71 | 276 | 44 | 212 | 7.29e-33 | 122 |
| Msa1291350 | AT1G23570.2 | 42.361 | 144 | 77 | 3 | 140 | 279 | 78 | 219 | 2.77e-32 | 121 |
| Msa1291350 | AT1G23570.1 | 42.657 | 143 | 76 | 3 | 141 | 279 | 77 | 217 | 7.33e-32 | 120 |
| Msa1291350 | AT1G23580.1 | 41.176 | 153 | 84 | 3 | 140 | 288 | 47 | 197 | 5.64e-31 | 117 |
| Msa1291350 | AT1G23520.2 | 37.500 | 120 | 65 | 4 | 78 | 188 | 42 | 160 | 1.58e-18 | 82.0 |
| Msa1291350 | AT1G23510.1 | 34.058 | 138 | 79 | 4 | 78 | 203 | 46 | 183 | 1.88e-16 | 77.0 |
| Msa1291350 | AT1G23510.3 | 33.577 | 137 | 79 | 4 | 79 | 203 | 1 | 137 | 7.22e-16 | 74.3 |
| Msa1291350 | AT1G23510.2 | 33.577 | 137 | 79 | 4 | 79 | 203 | 1 | 137 | 7.22e-16 | 74.3 |
Find 84 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTGTTACGGGTTTAA+AGG | 0.177504 | 8_3:+46674265 | None:intergenic |
| CACTATTTCGATTAATGTTT+TGG | 0.189652 | 8_3:-46674866 | Msa1291350:CDS |
| AGTTGTTCAGATCACTTTAA+AGG | 0.213726 | 8_3:-46673866 | Msa1291350:three_prime_UTR |
| TCCTCTCAAATACCATGATA+TGG | 0.256091 | 8_3:+46674151 | None:intergenic |
| ATCTTCAGCAAGCAGCTATT+TGG | 0.282634 | 8_3:-46674909 | Msa1291350:CDS |
| CTCATATCCTCCTCTGATTC+TGG | 0.288664 | 8_3:+46674076 | None:intergenic |
| CAGCTATTTGGAGATTTCTT+TGG | 0.298357 | 8_3:-46674897 | Msa1291350:CDS |
| AGTGATATCCAGAAAAGTTT+TGG | 0.302534 | 8_3:-46674959 | Msa1291350:CDS |
| CATGGAAAGAAAATCCTTCT+TGG | 0.315393 | 8_3:-46675820 | Msa1291350:CDS |
| CTTTCCTTGAATCTCTTCCT+TGG | 0.317797 | 8_3:+46674043 | None:intergenic |
| ATTGCAGGATCCAATCGTTT+TGG | 0.317967 | 8_3:+46676081 | None:intergenic |
| CAAAACATGAAGGAATGAAT+TGG | 0.343925 | 8_3:-46675916 | Msa1291350:CDS |
| TCCTTTGTTACGGGTTTAAA+GGG | 0.344218 | 8_3:+46674266 | None:intergenic |
| GAGGTTGCAAAGAGAACCTT+TGG | 0.345597 | 8_3:+46675319 | None:intergenic |
| TGGAGATTTCTTTGGTGGTC+TGG | 0.348608 | 8_3:-46674889 | Msa1291350:CDS |
| TTGTAATCTTCCTTTGTTAC+GGG | 0.356737 | 8_3:+46674257 | None:intergenic |
| AAAACATGAAGGAATGAATT+GGG | 0.369792 | 8_3:-46675915 | Msa1291350:CDS |
| GTTGCTTCGTCGACAAATAA+AGG | 0.370008 | 8_3:+46674296 | None:intergenic |
| ACTATATTATATACTGCATC+AGG | 0.370343 | 8_3:+46675269 | None:intergenic |
| TAAAGTGATCTGAACAACTA+TGG | 0.377847 | 8_3:+46673870 | None:intergenic |
| ACAAGAGGAAAAGGAAGAAT+TGG | 0.378739 | 8_3:-46674227 | Msa1291350:CDS |
| GAGAACTTGCCTTCAAAGTT+GGG | 0.380206 | 8_3:+46677186 | None:intergenic |
| TTGAAAACTCTTCTATTGTC+AGG | 0.399953 | 8_3:+46675239 | None:intergenic |
| GGCATGCCTTGTTATGTTAT+CGG | 0.418487 | 8_3:+46673756 | None:intergenic |
| TGAGAACTTGCCTTCAAAGT+TGG | 0.420746 | 8_3:+46677185 | None:intergenic |
| CTATTTGGAGATTTCTTTGG+TGG | 0.430423 | 8_3:-46674894 | Msa1291350:CDS |
| ATGGAAAGAAAATCCTTCTT+GGG | 0.431591 | 8_3:-46675819 | Msa1291350:CDS |
| GGGAGATCTGTTCAGAGAAA+TGG | 0.431670 | 8_3:-46675893 | Msa1291350:CDS |
| TATAAGCATTTCAGTTGTCT+TGG | 0.439312 | 8_3:+46674121 | None:intergenic |
| AGTTAGGTTTCCAAAACGAT+TGG | 0.453278 | 8_3:-46676091 | Msa1291350:CDS |
| GGAGGTGGAGGGACAATGGC+TGG | 0.454095 | 8_3:+46674173 | None:intergenic |
| CTGATCCTCACCTCTACTAC+TGG | 0.459685 | 8_3:+46675785 | None:intergenic |
| ATTGTAATCTTCCTTTGTTA+CGG | 0.464373 | 8_3:+46674256 | None:intergenic |
| AATATGTGTACAAGAGGAAA+AGG | 0.468904 | 8_3:-46674236 | Msa1291350:CDS |
| AGGAAAGCATGGTGAAAACT+TGG | 0.474837 | 8_3:-46674027 | Msa1291350:CDS |
| CAAGTTTCAAAATATTGTAA+AGG | 0.475448 | 8_3:-46676031 | Msa1291350:intron |
| CCTCTCAAATACCATGATAT+GGG | 0.484566 | 8_3:+46674152 | None:intergenic |
| CTCAATGTAGAAGTTGATGT+TGG | 0.487073 | 8_3:-46675299 | Msa1291350:CDS |
| TACCATGATATGGGAGGTGG+AGG | 0.496174 | 8_3:+46674161 | None:intergenic |
| TGTTATTCGTGTTAGCTATG+AGG | 0.499997 | 8_3:+46674003 | None:intergenic |
| CAGAATCAGAGGAGGATATG+AGG | 0.500535 | 8_3:-46674075 | Msa1291350:CDS |
| TCCCTCCACCTCCCATATCA+TGG | 0.510199 | 8_3:-46674163 | Msa1291350:CDS |
| TCAATGTAGAAGTTGATGTT+GGG | 0.514333 | 8_3:-46675298 | Msa1291350:CDS |
| AAGTTCAAGCAAACCAAGAC+AGG | 0.515646 | 8_3:-46674356 | Msa1291350:CDS |
| TGAAGGAGCAAGTGCAAGCA+TGG | 0.518952 | 8_3:-46675838 | Msa1291350:CDS |
| CGAATAACATTAAAGAGAGA+TGG | 0.528311 | 8_3:-46673989 | Msa1291350:CDS |
| AAATACCATGATATGGGAGG+TGG | 0.553944 | 8_3:+46674158 | None:intergenic |
| TTGAGAATTGAAAGGTATGG+AGG | 0.554883 | 8_3:+46677252 | None:intergenic |
| CAACATCAACTTCTACATTG+AGG | 0.558943 | 8_3:+46675300 | None:intergenic |
| AAGTCCAAGGAAGAGATTCA+AGG | 0.560700 | 8_3:-46674047 | Msa1291350:CDS |
| TGCTTCTGAAGCTGAACTGA+AGG | 0.567738 | 8_3:-46675855 | Msa1291350:CDS |
| TCCCTTTAAACCCGTAACAA+AGG | 0.570918 | 8_3:-46674267 | Msa1291350:CDS |
| TGGCAGGTGACTGTTCCCAA+AGG | 0.575508 | 8_3:-46675335 | Msa1291350:intron |
| AGAGGGTGGCAAATTCAGCT+TGG | 0.578004 | 8_3:-46676133 | Msa1291350:CDS |
| ATCCTCACCTCTACTACTGG+TGG | 0.584673 | 8_3:+46675788 | None:intergenic |
| ATCTTGAGAATTGAAAGGTA+TGG | 0.587078 | 8_3:+46677249 | None:intergenic |
| TATGGGAGGTGGAGGGACAA+TGG | 0.588925 | 8_3:+46674169 | None:intergenic |
| GAAGAGATTCAAGGAAAGCA+TGG | 0.592914 | 8_3:-46674038 | Msa1291350:CDS |
| GATTACAATATGTGTACAAG+AGG | 0.593335 | 8_3:-46674242 | Msa1291350:CDS |
| AGGTTGCAAAGAGAACCTTT+GGG | 0.595888 | 8_3:+46675320 | None:intergenic |
| ACAATATCTTGAGAATTGAA+AGG | 0.596320 | 8_3:+46677244 | None:intergenic |
| CTATATTATATACTGCATCA+GGG | 0.600212 | 8_3:+46675270 | None:intergenic |
| TTTATGATGGGTGAATCAGA+GGG | 0.600858 | 8_3:-46676150 | Msa1291350:CDS |
| TGAGAATTGAAAGGTATGGA+GGG | 0.605112 | 8_3:+46677253 | None:intergenic |
| CCCATATCATGGTATTTGAG+AGG | 0.605593 | 8_3:-46674152 | Msa1291350:CDS |
| AGTAGATTAGCAAAACATGA+AGG | 0.605643 | 8_3:-46675926 | Msa1291350:CDS |
| GGTGGCTTATCAACCCAAGA+AGG | 0.614982 | 8_3:+46675806 | None:intergenic |
| TATATTATATACTGCATCAG+GGG | 0.615285 | 8_3:+46675271 | None:intergenic |
| TGATAAGCCACCAGTAGTAG+AGG | 0.615534 | 8_3:-46675795 | Msa1291350:intron |
| GCAGAAACTTCCAGAATCAG+AGG | 0.615549 | 8_3:-46674086 | Msa1291350:CDS |
| TGGCTCAATGCATTCCAGTG+TGG | 0.617523 | 8_3:-46673795 | Msa1291350:three_prime_UTR |
| CAAACAATCTAAAACTACAA+TGG | 0.619354 | 8_3:+46673735 | None:intergenic |
| AAACATGAAGGAATGAATTG+GGG | 0.624768 | 8_3:-46675914 | Msa1291350:CDS |
| AAAATTTGAGGGCTGCTGGA+GGG | 0.625928 | 8_3:-46674324 | Msa1291350:CDS |
| CTCAAATACCATGATATGGG+AGG | 0.639863 | 8_3:+46674155 | None:intergenic |
| ATATGAGGCTGAAAAGTCCA+AGG | 0.654650 | 8_3:-46674060 | Msa1291350:CDS |
| ATATTATATACTGCATCAGG+GGG | 0.664252 | 8_3:+46675272 | None:intergenic |
| ATGATGGGTGAATCAGAGGG+TGG | 0.670961 | 8_3:-46676147 | Msa1291350:CDS |
| AACATGAAGGAATGAATTGG+GGG | 0.686683 | 8_3:-46675913 | Msa1291350:CDS |
| GTATCAAGAATTGACCACAC+TGG | 0.695140 | 8_3:+46673781 | None:intergenic |
| TGATGAGGGTCATAGGCAAG+TGG | 0.696850 | 8_3:-46674935 | Msa1291350:CDS |
| ATACATCCGATAACATAACA+AGG | 0.699983 | 8_3:-46673762 | Msa1291350:three_prime_UTR |
| GAAACTTCCAGAATCAGAGG+AGG | 0.702560 | 8_3:-46674083 | Msa1291350:CDS |
| ACCATGATATGGGAGGTGGA+GGG | 0.711287 | 8_3:+46674162 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTATTTTGAAAACT+CGG | - | chr8_3:46674087-46674106 | Msa1291350:CDS | 10.0% |
| !!! | AACTATTTTTATAACTTTAA+AGG | - | chr8_3:46677093-46677112 | Msa1291350:intron | 10.0% |
| !! | TATGTTATAGGTTTAAAAAT+AGG | + | chr8_3:46674607-46674626 | None:intergenic | 15.0% |
| !! | ATATTCTAGGTTTATAAAAT+AGG | + | chr8_3:46674691-46674710 | None:intergenic | 15.0% |
| !! | TTTATGAAGTTTAAATCAAT+AGG | + | chr8_3:46675503-46675522 | None:intergenic | 15.0% |
| !!! | AATTCTAATTCTTCAATTTT+AGG | + | chr8_3:46676351-46676370 | None:intergenic | 15.0% |
| !!! | AAGTAATTTTTTGTTGTTGT+TGG | + | chr8_3:46673783-46673802 | None:intergenic | 20.0% |
| !!! | TAAAGACTTTTATATAACCA+TGG | - | chr8_3:46674376-46674395 | Msa1291350:intron | 20.0% |
| !! | TAAAACCTTGGTTTAAAAAT+GGG | + | chr8_3:46674496-46674515 | None:intergenic | 20.0% |
| !! | TTAAAACCTTGGTTTAAAAA+TGG | + | chr8_3:46674497-46674516 | None:intergenic | 20.0% |
| !!! | AACAGTTGTTATTATGTTAT+AGG | + | chr8_3:46674619-46674638 | None:intergenic | 20.0% |
| !! | GTTATGTATTTGTAATATGA+AGG | - | chr8_3:46674786-46674805 | Msa1291350:intron | 20.0% |
| !!! | CATTTTTCTTAAAAAATTCC+AGG | - | chr8_3:46674817-46674836 | Msa1291350:intron | 20.0% |
| !! | ACAAAAAATTTAGATATTGC+AGG | + | chr8_3:46674929-46674948 | None:intergenic | 20.0% |
| !! | CAAGTTTCAAAATATTGTAA+AGG | - | chr8_3:46674961-46674980 | Msa1291350:CDS | 20.0% |
| !!! | CATAAATGAAGTATCTAATA+AGG | - | chr8_3:46675517-46675536 | Msa1291350:intron | 20.0% |
| !! | ATTATTTCAATTCTTCTTGA+AGG | + | chr8_3:46675594-46675613 | None:intergenic | 20.0% |
| !!! | ATTCTAAATGATGTTTTTCT+TGG | - | chr8_3:46676004-46676023 | Msa1291350:intron | 20.0% |
| !!! | ATCCTTTTTCTTATAATGAA+TGG | - | chr8_3:46676185-46676204 | Msa1291350:intron | 20.0% |
| !! | ATCCATTCATTATAAGAAAA+AGG | + | chr8_3:46676190-46676209 | None:intergenic | 20.0% |
| !!! | ATCATACACACATATTTTAA+CGG | - | chr8_3:46676378-46676397 | Msa1291350:intron | 20.0% |
| ! | ACAATATCTTGAGAATTGAA+AGG | + | chr8_3:46673751-46673770 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTTCTTCATGTG+TGG | + | chr8_3:46674039-46674058 | None:intergenic | 25.0% |
| ! | ATAATGGTTTCAGCATAATA+AGG | + | chr8_3:46674068-46674087 | None:intergenic | 25.0% |
| ! | GAATCAAATGAAACTATGTA+TGG | - | chr8_3:46674159-46674178 | Msa1291350:CDS | 25.0% |
| ! | TTGTGAGCAAAACATAATAA+CGG | + | chr8_3:46674217-46674236 | None:intergenic | 25.0% |
| !! | TTATTATGTTTTGCTCACAA+AGG | - | chr8_3:46674217-46674236 | Msa1291350:CDS | 25.0% |
| ! | AATAAATTGCAGCTAACATA+TGG | + | chr8_3:46674250-46674269 | None:intergenic | 25.0% |
| ! | GGTATTAACTGTATTCAATT+AGG | - | chr8_3:46674297-46674316 | Msa1291350:CDS | 25.0% |
| ! | TGTACATTGTCACAATTAAA+TGG | - | chr8_3:46674551-46674570 | Msa1291350:intron | 25.0% |
| ! | TTATAAATCACAGCTAAATG+TGG | - | chr8_3:46674637-46674656 | Msa1291350:intron | 25.0% |
| ! | TAAATTTCTCAACTTGATAG+AGG | + | chr8_3:46674719-46674738 | None:intergenic | 25.0% |
| !! | CTATCTTCAGGTAAATTTTA+AGG | + | chr8_3:46674755-46674774 | None:intergenic | 25.0% |
| !! | AAAATTCCAGGTTTTTATGA+TGG | - | chr8_3:46674829-46674848 | Msa1291350:intron | 25.0% |
| !! | AAATTCCAGGTTTTTATGAT+GGG | - | chr8_3:46674830-46674849 | Msa1291350:intron | 25.0% |
| !!! | ACAATATTTTGAAACTTGTG+AGG | + | chr8_3:46674959-46674978 | None:intergenic | 25.0% |
| ! | AAAACATGAAGGAATGAATT+GGG | - | chr8_3:46675077-46675096 | Msa1291350:intron | 25.0% |
| ! | TTACTGAAACAGAAGATTAT+TGG | - | chr8_3:46675268-46675287 | Msa1291350:CDS | 25.0% |
| !! | ATCTCAGTAAATGTTTCTTT+TGG | - | chr8_3:46675637-46675656 | Msa1291350:intron | 25.0% |
| ! | TATATTATATACTGCATCAG+GGG | + | chr8_3:46675724-46675743 | None:intergenic | 25.0% |
| ! | CTATATTATATACTGCATCA+GGG | + | chr8_3:46675725-46675744 | None:intergenic | 25.0% |
| ! | ACTATATTATATACTGCATC+AGG | + | chr8_3:46675726-46675745 | None:intergenic | 25.0% |
| !! | CACTATTTCGATTAATGTTT+TGG | - | chr8_3:46676126-46676145 | Msa1291350:CDS | 25.0% |
| !! | TGAATGGATTTCATATTTGT+TGG | - | chr8_3:46676201-46676220 | Msa1291350:intron | 25.0% |
| !!! | ATATTTGTTGGACAATTTTG+AGG | - | chr8_3:46676213-46676232 | Msa1291350:intron | 25.0% |
| !!! | ATTCTTCAATTTTAGGTAGT+TGG | + | chr8_3:46676344-46676363 | None:intergenic | 25.0% |
| !! | TACTTTTCATCCAACAAAAA+AGG | - | chr8_3:46676577-46676596 | Msa1291350:intron | 25.0% |
| !!! | AGATATACATCCTTTTTTGT+TGG | + | chr8_3:46676590-46676609 | None:intergenic | 25.0% |
| !!! | ATCTTACTGCTACTTAATTT+TGG | - | chr8_3:46676606-46676625 | Msa1291350:intron | 25.0% |
| ! | AGGATTCATGAAAAAATTTG+AGG | - | chr8_3:46676656-46676675 | Msa1291350:intron | 25.0% |
| ! | GGATTCATGAAAAAATTTGA+GGG | - | chr8_3:46676657-46676676 | Msa1291350:intron | 25.0% |
| ! | ATTGTAATCTTCCTTTGTTA+CGG | + | chr8_3:46676739-46676758 | None:intergenic | 25.0% |
| !!! | TTAAAGAGAGATGGATTTTA+AGG | - | chr8_3:46677012-46677031 | Msa1291350:intron | 25.0% |
| !! | CAAACAATCTAAAACTACAA+TGG | + | chr8_3:46677260-46677279 | None:intergenic | 25.0% |
| !!! | CATTGTAGTTTTAGATTGTT+TGG | - | chr8_3:46677258-46677277 | Msa1291350:five_prime_UTR | 25.0% |
| ATCTTGAGAATTGAAAGGTA+TGG | + | chr8_3:46673746-46673765 | None:intergenic | 30.0% | |
| !!! | TTACTTTTTCCCAACTTTGA+AGG | - | chr8_3:46673797-46673816 | Msa1291350:three_prime_UTR | 30.0% |
| !! | GTCATGCTTGTTCTAAATTT+TGG | - | chr8_3:46673966-46673985 | Msa1291350:CDS | 30.0% |
| !! | TATTTTGAAAACTCGGTATC+CGG | - | chr8_3:46674094-46674113 | Msa1291350:CDS | 30.0% |
| GTATTCAATTAGGATTTCGA+AGG | - | chr8_3:46674307-46674326 | Msa1291350:CDS | 30.0% | |
| ! | TGCGTTCTAATTTAAAACCA+TGG | + | chr8_3:46674396-46674415 | None:intergenic | 30.0% |
| ! | TGTATCACGATTTAAAACCT+TGG | + | chr8_3:46674508-46674527 | None:intergenic | 30.0% |
| TGTGACAATGTACAATATCA+AGG | + | chr8_3:46674545-46674564 | None:intergenic | 30.0% | |
| ! | ATAAAATAGGTCTGAAATCG+TGG | + | chr8_3:46674678-46674697 | None:intergenic | 30.0% |
| GATAGAGGTAGTTATATTCT+AGG | + | chr8_3:46674704-46674723 | None:intergenic | 30.0% | |
| CTACTACTATTACTATCTTC+AGG | + | chr8_3:46674767-46674786 | None:intergenic | 30.0% | |
| !!! | CCTAACTTTTTCATTCTTTC+TGG | + | chr8_3:46674888-46674907 | None:intergenic | 30.0% |
| CCAGAAAGAATGAAAAAGTT+AGG | - | chr8_3:46674885-46674904 | Msa1291350:CDS | 30.0% | |
| AGTAGATTAGCAAAACATGA+AGG | - | chr8_3:46675066-46675085 | Msa1291350:intron | 30.0% | |
| CAAAACATGAAGGAATGAAT+TGG | - | chr8_3:46675076-46675095 | Msa1291350:intron | 30.0% | |
| AAACATGAAGGAATGAATTG+GGG | - | chr8_3:46675078-46675097 | Msa1291350:intron | 30.0% | |
| ATGGAAAGAAAATCCTTCTT+GGG | - | chr8_3:46675173-46675192 | Msa1291350:intron | 30.0% | |
| !! | GGAATAGGATTGATTTTCTT+TGG | - | chr8_3:46675231-46675250 | Msa1291350:CDS | 30.0% |
| !! | GTACTCATAAGTTTTAGTGT+CGG | - | chr8_3:46675431-46675450 | Msa1291350:intron | 30.0% |
| AAGGCATATGAAAGTTAAGT+AGG | + | chr8_3:46675575-46675594 | None:intergenic | 30.0% | |
| !! | TCAATGTAGAAGTTGATGTT+GGG | - | chr8_3:46675694-46675713 | Msa1291350:intron | 30.0% |
| ATATTATATACTGCATCAGG+GGG | + | chr8_3:46675723-46675742 | None:intergenic | 30.0% | |
| TTGAAAACTCTTCTATTGTC+AGG | + | chr8_3:46675756-46675775 | None:intergenic | 30.0% | |
| ! | AAATGATGTTTTTCTTGGTC+AGG | - | chr8_3:46676009-46676028 | Msa1291350:intron | 30.0% |
| ! | AGTGATATCCAGAAAAGTTT+TGG | - | chr8_3:46676033-46676052 | Msa1291350:CDS | 30.0% |
| !!! | AGAAAAGTTTTGGTTGATGA+GGG | - | chr8_3:46676043-46676062 | Msa1291350:CDS | 30.0% |
| TCGTAGTAACAAACAATCAA+CGG | + | chr8_3:46676512-46676531 | None:intergenic | 30.0% | |
| !!! | TTTTTTCATGAATCCTGTCT+TGG | + | chr8_3:46676652-46676671 | None:intergenic | 30.0% |
| TTGTAATCTTCCTTTGTTAC+GGG | + | chr8_3:46676738-46676757 | None:intergenic | 30.0% | |
| GATTACAATATGTGTACAAG+AGG | - | chr8_3:46676750-46676769 | Msa1291350:intron | 30.0% | |
| AATATGTGTACAAGAGGAAA+AGG | - | chr8_3:46676756-46676775 | Msa1291350:intron | 30.0% | |
| TATAAGCATTTCAGTTGTCT+TGG | + | chr8_3:46676874-46676893 | None:intergenic | 30.0% | |
| CGAATAACATTAAAGAGAGA+TGG | - | chr8_3:46677003-46677022 | Msa1291350:intron | 30.0% | |
| TAAAGTGATCTGAACAACTA+TGG | + | chr8_3:46677125-46677144 | None:intergenic | 30.0% | |
| AGTTGTTCAGATCACTTTAA+AGG | - | chr8_3:46677126-46677145 | Msa1291350:intron | 30.0% | |
| !!! | TGTTGATGCCACTAATTTTT+TGG | - | chr8_3:46677177-46677196 | Msa1291350:five_prime_UTR | 30.0% |
| ATACATCCGATAACATAACA+AGG | - | chr8_3:46677230-46677249 | Msa1291350:five_prime_UTR | 30.0% | |
| ! | TGAGAATTGAAAGGTATGGA+GGG | + | chr8_3:46673742-46673761 | None:intergenic | 35.0% |
| ! | TTGAGAATTGAAAGGTATGG+AGG | + | chr8_3:46673743-46673762 | None:intergenic | 35.0% |
| TTAGAACAAGCATGACTCAT+TGG | + | chr8_3:46673962-46673981 | None:intergenic | 35.0% | |
| !! | CTCCTCAACTAACTTGTTAT+CGG | - | chr8_3:46674273-46674292 | Msa1291350:CDS | 35.0% |
| !! | TCCTCAACTAACTTGTTATC+GGG | - | chr8_3:46674274-46674293 | Msa1291350:CDS | 35.0% |
| TTTGCGATGAAAAAGTCTTG+TGG | - | chr8_3:46674346-46674365 | Msa1291350:CDS | 35.0% | |
| ! | ATTAGAACGCAATCGTGTTT+TGG | - | chr8_3:46674405-46674424 | Msa1291350:intron | 35.0% |
| AATCGTGGTTGAGAATGTAT+CGG | + | chr8_3:46674663-46674682 | None:intergenic | 35.0% | |
| ATTCACCCATCATAAAAACC+TGG | + | chr8_3:46674838-46674857 | None:intergenic | 35.0% | |
| !!! | TTTTATGATGGGTGAATCAG+AGG | - | chr8_3:46674841-46674860 | Msa1291350:CDS | 35.0% |
| !! | TTTATGATGGGTGAATCAGA+GGG | - | chr8_3:46674842-46674861 | Msa1291350:CDS | 35.0% |
| AGTTAGGTTTCCAAAACGAT+TGG | - | chr8_3:46674901-46674920 | Msa1291350:CDS | 35.0% | |
| ! | AAGGTTAGTCATCAATCCTA+TGG | - | chr8_3:46674980-46674999 | Msa1291350:intron | 35.0% |
| CGTACTAAACTATTAGCCAT+AGG | + | chr8_3:46674999-46675018 | None:intergenic | 35.0% | |
| AACATGAAGGAATGAATTGG+GGG | - | chr8_3:46675079-46675098 | Msa1291350:intron | 35.0% | |
| CATGGAAAGAAAATCCTTCT+TGG | - | chr8_3:46675172-46675191 | Msa1291350:intron | 35.0% | |
| ! | CAGTAAATGTTTCTTTTGGC+AGG | - | chr8_3:46675641-46675660 | Msa1291350:intron | 35.0% |
| CAACATCAACTTCTACATTG+AGG | + | chr8_3:46675695-46675714 | None:intergenic | 35.0% | |
| !! | CTCAATGTAGAAGTTGATGT+TGG | - | chr8_3:46675693-46675712 | Msa1291350:intron | 35.0% |
| ATAAGTCTGCTCAATGTGTT+TGG | - | chr8_3:46675806-46675825 | Msa1291350:CDS | 35.0% | |
| ! | CTCATCAACCAAAACTTTTC+TGG | + | chr8_3:46676044-46676063 | None:intergenic | 35.0% |
| !!! | CAGAAAAGTTTTGGTTGATG+AGG | - | chr8_3:46676042-46676061 | Msa1291350:CDS | 35.0% |
| CAGCTATTTGGAGATTTCTT+TGG | - | chr8_3:46676095-46676114 | Msa1291350:CDS | 35.0% | |
| CTATTTGGAGATTTCTTTGG+TGG | - | chr8_3:46676098-46676117 | Msa1291350:CDS | 35.0% | |
| ACAGAAATGACTACTCTGTA+AGG | - | chr8_3:46676158-46676177 | Msa1291350:intron | 35.0% | |
| ! | GGCACATAAAGTCAATTTTG+AGG | - | chr8_3:46676234-46676253 | Msa1291350:intron | 35.0% |
| !! | ATTTGTTTCTACGACACCAA+GGG | + | chr8_3:46676486-46676505 | None:intergenic | 35.0% |
| !! | TTGGTGTCGTAGAAACAAAT+GGG | - | chr8_3:46676486-46676505 | Msa1291350:intron | 35.0% |
| TCCTTTGTTACGGGTTTAAA+GGG | + | chr8_3:46676729-46676748 | None:intergenic | 35.0% | |
| TTCCTTTGTTACGGGTTTAA+AGG | + | chr8_3:46676730-46676749 | None:intergenic | 35.0% | |
| ACAAGAGGAAAAGGAAGAAT+TGG | - | chr8_3:46676765-46676784 | Msa1291350:intron | 35.0% | |
| CCTCTCAAATACCATGATAT+GGG | + | chr8_3:46676843-46676862 | None:intergenic | 35.0% | |
| TCCTCTCAAATACCATGATA+TGG | + | chr8_3:46676844-46676863 | None:intergenic | 35.0% | |
| TGTTATTCGTGTTAGCTATG+AGG | + | chr8_3:46676992-46677011 | None:intergenic | 35.0% | |
| GCATTGAGCCAAAAAATTAG+TGG | + | chr8_3:46677188-46677207 | None:intergenic | 35.0% | |
| GAGAACTTGCCTTCAAAGTT+GGG | + | chr8_3:46673809-46673828 | None:intergenic | 40.0% | |
| TGAGAACTTGCCTTCAAAGT+TGG | + | chr8_3:46673810-46673829 | None:intergenic | 40.0% | |
| TTTGATTCCCTGCTAGTGAA+AGG | + | chr8_3:46674147-46674166 | None:intergenic | 40.0% | |
| AACCTAACAATTCCCGTGTT+GGG | + | chr8_3:46674190-46674209 | None:intergenic | 40.0% | |
| TAACCTAACAATTCCCGTGT+TGG | + | chr8_3:46674191-46674210 | None:intergenic | 40.0% | |
| !! | CCTCAACTAACTTGTTATCG+GGG | - | chr8_3:46674275-46674294 | Msa1291350:CDS | 40.0% |
| !! | CTCAACTAACTTGTTATCGG+GGG | - | chr8_3:46674276-46674295 | Msa1291350:CDS | 40.0% |
| !! | GCAGACCCATTTTTAAACCA+AGG | - | chr8_3:46674488-46674507 | Msa1291350:intron | 40.0% |
| ! | ATTGCAGGATCCAATCGTTT+TGG | + | chr8_3:46674914-46674933 | None:intergenic | 40.0% |
| TCTTTAACCTGTTCCTGTCT+AGG | - | chr8_3:46675326-46675345 | Msa1291350:CDS | 40.0% | |
| !! | TCGTTTTAGGTCCTTGTATG+TGG | + | chr8_3:46675360-46675379 | None:intergenic | 40.0% |
| !! | AGTTTTAGTGTCGGACACTT+AGG | - | chr8_3:46675440-46675459 | Msa1291350:intron | 40.0% |
| ! | ACACTGACAATCTGAAGTGT+CGG | - | chr8_3:46675464-46675483 | Msa1291350:intron | 40.0% |
| AGGTTGCAAAGAGAACCTTT+GGG | + | chr8_3:46675675-46675694 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTGATGAGGGTCAT+AGG | - | chr8_3:46676050-46676069 | Msa1291350:CDS | 40.0% |
| ATCTTCAGCAAGCAGCTATT+TGG | - | chr8_3:46676083-46676102 | Msa1291350:CDS | 40.0% | |
| ! | CCAAGAGAGTCTTATAAGAG+AGG | + | chr8_3:46676272-46676291 | None:intergenic | 40.0% |
| CCTCTCTTATAAGACTCTCT+TGG | - | chr8_3:46676269-46676288 | Msa1291350:intron | 40.0% | |
| !! | CATTTGTTTCTACGACACCA+AGG | + | chr8_3:46676487-46676506 | None:intergenic | 40.0% |
| !! | CTTGGTGTCGTAGAAACAAA+TGG | - | chr8_3:46676485-46676504 | Msa1291350:intron | 40.0% |
| AAGTTCAAGCAAACCAAGAC+AGG | - | chr8_3:46676636-46676655 | Msa1291350:intron | 40.0% | |
| TGAAAAAATTTGAGGGCTGC+TGG | - | chr8_3:46676664-46676683 | Msa1291350:intron | 40.0% | |
| GTTGCTTCGTCGACAAATAA+AGG | + | chr8_3:46676699-46676718 | None:intergenic | 40.0% | |
| TCCCTTTAAACCCGTAACAA+AGG | - | chr8_3:46676725-46676744 | Msa1291350:intron | 40.0% | |
| AAATACCATGATATGGGAGG+TGG | + | chr8_3:46676837-46676856 | None:intergenic | 40.0% | |
| CTCAAATACCATGATATGGG+AGG | + | chr8_3:46676840-46676859 | None:intergenic | 40.0% | |
| CCCATATCATGGTATTTGAG+AGG | - | chr8_3:46676840-46676859 | Msa1291350:intron | 40.0% | |
| ATATGAGGCTGAAAAGTCCA+AGG | - | chr8_3:46676932-46676951 | Msa1291350:intron | 40.0% | |
| AAGTCCAAGGAAGAGATTCA+AGG | - | chr8_3:46676945-46676964 | Msa1291350:intron | 40.0% | |
| CTTTCCTTGAATCTCTTCCT+TGG | + | chr8_3:46676952-46676971 | None:intergenic | 40.0% | |
| GAAGAGATTCAAGGAAAGCA+TGG | - | chr8_3:46676954-46676973 | Msa1291350:intron | 40.0% | |
| ! | AGGAAAGCATGGTGAAAACT+TGG | - | chr8_3:46676965-46676984 | Msa1291350:intron | 40.0% |
| GTATCAAGAATTGACCACAC+TGG | + | chr8_3:46677214-46677233 | None:intergenic | 40.0% | |
| ! | GGCATGCCTTGTTATGTTAT+CGG | + | chr8_3:46677239-46677258 | None:intergenic | 40.0% |
| AATCCCACCTTTCACTAGCA+GGG | - | chr8_3:46674137-46674156 | Msa1291350:CDS | 45.0% | |
| ATTCCCTGCTAGTGAAAGGT+GGG | + | chr8_3:46674143-46674162 | None:intergenic | 45.0% | |
| TAACAATTCCCGTGTTGGGT+CGG | + | chr8_3:46674186-46674205 | None:intergenic | 45.0% | |
| CCCCGATAACAAGTTAGTTG+AGG | + | chr8_3:46674278-46674297 | None:intergenic | 45.0% | |
| TGGGTCTGCAATCATTGTTG+AGG | + | chr8_3:46674477-46674496 | None:intergenic | 45.0% | |
| GGGAGATCTGTTCAGAGAAA+TGG | - | chr8_3:46675099-46675118 | Msa1291350:intron | 45.0% | |
| !! | TGCTTCTGAAGCTGAACTGA+AGG | - | chr8_3:46675137-46675156 | Msa1291350:intron | 45.0% |
| TGATAAGCCACCAGTAGTAG+AGG | - | chr8_3:46675197-46675216 | Msa1291350:intron | 45.0% | |
| GAGGTTGCAAAGAGAACCTT+TGG | + | chr8_3:46675676-46675695 | None:intergenic | 45.0% | |
| ! | TGGAGATTTCTTTGGTGGTC+TGG | - | chr8_3:46676103-46676122 | Msa1291350:CDS | 45.0% |
| AAAAATTTGAGGGCTGCTGG+AGG | - | chr8_3:46676667-46676686 | Msa1291350:intron | 45.0% | |
| AAAATTTGAGGGCTGCTGGA+GGG | - | chr8_3:46676668-46676687 | Msa1291350:intron | 45.0% | |
| GCAGAAACTTCCAGAATCAG+AGG | - | chr8_3:46676906-46676925 | Msa1291350:intron | 45.0% | |
| GAAACTTCCAGAATCAGAGG+AGG | - | chr8_3:46676909-46676928 | Msa1291350:intron | 45.0% | |
| CTCATATCCTCCTCTGATTC+TGG | + | chr8_3:46676919-46676938 | None:intergenic | 45.0% | |
| CAGAATCAGAGGAGGATATG+AGG | - | chr8_3:46676917-46676936 | Msa1291350:intron | 45.0% | |
| !! | TTTCAAAATAATAATAATAA+TGG | + | chr8_3:46674084-46674103 | None:intergenic | 5.0% |
| GGTATCCGGACTGACTAATC+CGG | - | chr8_3:46674108-46674127 | Msa1291350:CDS | 50.0% | |
| GTATCCGGACTGACTAATCC+GGG | - | chr8_3:46674109-46674128 | Msa1291350:CDS | 50.0% | |
| TATCCGGACTGACTAATCCG+GGG | - | chr8_3:46674110-46674129 | Msa1291350:CDS | 50.0% | |
| CTGCTAGTGAAAGGTGGGAT+TGG | + | chr8_3:46674138-46674157 | None:intergenic | 50.0% | |
| CAATCCCACCTTTCACTAGC+AGG | - | chr8_3:46674136-46674155 | Msa1291350:CDS | 50.0% | |
| GATTCCCTGCTAGTGAAAGG+TGG | + | chr8_3:46674144-46674163 | None:intergenic | 50.0% | |
| ATGTATGGACCGACCCAACA+CGG | - | chr8_3:46674174-46674193 | Msa1291350:CDS | 50.0% | |
| GACCCAACACGGGAATTGTT+AGG | - | chr8_3:46674185-46674204 | Msa1291350:CDS | 50.0% | |
| GAGCTGATGCAGTCTCAACT+GGG | - | chr8_3:46674573-46674592 | Msa1291350:intron | 50.0% | |
| !! | ATGATGGGTGAATCAGAGGG+TGG | - | chr8_3:46674845-46674864 | Msa1291350:CDS | 50.0% |
| AGAGGGTGGCAAATTCAGCT+TGG | - | chr8_3:46674859-46674878 | Msa1291350:CDS | 50.0% | |
| TGAAGGAGCAAGTGCAAGCA+TGG | - | chr8_3:46675154-46675173 | Msa1291350:intron | 50.0% | |
| GGTGGCTTATCAACCCAAGA+AGG | + | chr8_3:46675189-46675208 | None:intergenic | 50.0% | |
| ATCCTCACCTCTACTACTGG+TGG | + | chr8_3:46675207-46675226 | None:intergenic | 50.0% | |
| CTGATCCTCACCTCTACTAC+TGG | + | chr8_3:46675210-46675229 | None:intergenic | 50.0% | |
| GTAGTAGAGGTGAGGATCAG+TGG | - | chr8_3:46675210-46675229 | Msa1291350:intron | 50.0% | |
| GAGGTGAGGATCAGTGGAAT+AGG | - | chr8_3:46675216-46675235 | Msa1291350:intron | 50.0% | |
| AGTGCTTCCTAGACAGGAAC+AGG | + | chr8_3:46675336-46675355 | None:intergenic | 50.0% | |
| !! | AGGAAGCACTGCCACATACA+AGG | - | chr8_3:46675346-46675365 | Msa1291350:intron | 50.0% |
| !!! | CTGCGTGTCTGTGTCGTTTT+AGG | + | chr8_3:46675373-46675392 | None:intergenic | 50.0% |
| CTAAAACGACACAGACACGC+AGG | - | chr8_3:46675371-46675390 | Msa1291350:intron | 50.0% | |
| TGATGAGGGTCATAGGCAAG+TGG | - | chr8_3:46676057-46676076 | Msa1291350:CDS | 50.0% | |
| CCAAGGGACGATGTTGTGAT+TGG | + | chr8_3:46676470-46676489 | None:intergenic | 50.0% | |
| CCAATCACAACATCGTCCCT+TGG | - | chr8_3:46676467-46676486 | Msa1291350:intron | 50.0% | |
| ACCATGATATGGGAGGTGGA+GGG | + | chr8_3:46676833-46676852 | None:intergenic | 50.0% | |
| TACCATGATATGGGAGGTGG+AGG | + | chr8_3:46676834-46676853 | None:intergenic | 50.0% | |
| TGGCTCAATGCATTCCAGTG+TGG | - | chr8_3:46677197-46677216 | Msa1291350:five_prime_UTR | 50.0% | |
| ATCCGGACTGACTAATCCGG+GGG | - | chr8_3:46674111-46674130 | Msa1291350:CDS | 55.0% | |
| TGTATGGACCGACCCAACAC+GGG | - | chr8_3:46674175-46674194 | Msa1291350:CDS | 55.0% | |
| GGAGCTGATGCAGTCTCAAC+TGG | - | chr8_3:46674572-46674591 | Msa1291350:intron | 55.0% | |
| AGCCACCAGTAGTAGAGGTG+AGG | - | chr8_3:46675202-46675221 | Msa1291350:intron | 55.0% | |
| TGTGGCAGTGCTTCCTAGAC+AGG | + | chr8_3:46675342-46675361 | None:intergenic | 55.0% | |
| !! | CTGAAGTGTCGGCGCTACAT+AGG | - | chr8_3:46675475-46675494 | Msa1291350:intron | 55.0% |
| TGGCAGGTGACTGTTCCCAA+AGG | - | chr8_3:46675657-46675676 | Msa1291350:intron | 55.0% | |
| TATGGGAGGTGGAGGGACAA+TGG | + | chr8_3:46676826-46676845 | None:intergenic | 55.0% | |
| TCCCTCCACCTCCCATATCA+TGG | - | chr8_3:46676829-46676848 | Msa1291350:intron | 55.0% | |
| !! | GTCCCCCGGATTAGTCAGTC+CGG | + | chr8_3:46674116-46674135 | None:intergenic | 60.0% |
| !! | GAAAGGTGGGATTGGTCCCC+CGG | + | chr8_3:46674130-46674149 | None:intergenic | 60.0% |
| ACGACACAGACACGCAGGCA+TGG | - | chr8_3:46675376-46675395 | Msa1291350:intron | 60.0% | |
| CGACACAGACACGCAGGCAT+GGG | - | chr8_3:46675377-46675396 | Msa1291350:intron | 60.0% | |
| GGAGGTGGAGGGACAATGGC+TGG | + | chr8_3:46676822-46676841 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 46673727 | 46677287 | 46673727 | ID=Msa1291350;Name=Msa1291350 |
| chr8_3 | mRNA | 46673727 | 46677287 | 46673727 | ID=Msa1291350-mRNA-1;Parent=Msa1291350;Name=Msa1291350-mRNA-1;_AED=0.08;_eAED=0.08;_QI=134|1|1|1|0.8|0.66|6|208|337 |
| chr8_3 | exon | 46673727 | 46674381 | 46673727 | ID=Msa1291350-mRNA-1:exon:12941;Parent=Msa1291350-mRNA-1 |
| chr8_3 | exon | 46674840 | 46674983 | 46674840 | ID=Msa1291350-mRNA-1:exon:12940;Parent=Msa1291350-mRNA-1 |
| chr8_3 | exon | 46675229 | 46675351 | 46675229 | ID=Msa1291350-mRNA-1:exon:12939;Parent=Msa1291350-mRNA-1 |
| chr8_3 | exon | 46675796 | 46675957 | 46675796 | ID=Msa1291350-mRNA-1:exon:12938;Parent=Msa1291350-mRNA-1 |
| chr8_3 | exon | 46676032 | 46676175 | 46676032 | ID=Msa1291350-mRNA-1:exon:12937;Parent=Msa1291350-mRNA-1 |
| chr8_3 | exon | 46677160 | 46677287 | 46677160 | ID=Msa1291350-mRNA-1:exon:12936;Parent=Msa1291350-mRNA-1 |
| chr8_3 | five_prime_UTR | 46677160 | 46677287 | 46677160 | ID=Msa1291350-mRNA-1:five_prime_utr;Parent=Msa1291350-mRNA-1 |
| chr8_3 | five_prime_UTR | 46676170 | 46676175 | 46676170 | ID=Msa1291350-mRNA-1:five_prime_utr;Parent=Msa1291350-mRNA-1 |
| chr8_3 | CDS | 46676032 | 46676169 | 46676032 | ID=Msa1291350-mRNA-1:cds;Parent=Msa1291350-mRNA-1 |
| chr8_3 | CDS | 46675796 | 46675957 | 46675796 | ID=Msa1291350-mRNA-1:cds;Parent=Msa1291350-mRNA-1 |
| chr8_3 | CDS | 46675229 | 46675351 | 46675229 | ID=Msa1291350-mRNA-1:cds;Parent=Msa1291350-mRNA-1 |
| chr8_3 | CDS | 46674840 | 46674983 | 46674840 | ID=Msa1291350-mRNA-1:cds;Parent=Msa1291350-mRNA-1 |
| chr8_3 | CDS | 46673935 | 46674381 | 46673935 | ID=Msa1291350-mRNA-1:cds;Parent=Msa1291350-mRNA-1 |
| chr8_3 | three_prime_UTR | 46673727 | 46673934 | 46673727 | ID=Msa1291350-mRNA-1:three_prime_utr;Parent=Msa1291350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
