AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1199270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199270 MtrunA17_Chr8g0364641 99.356 776 5 0 1 776 206 981 0.0 1598
Msa1199270 MtrunA17_Chr4g0073711 67.848 790 237 5 1 776 252 1038 0.0 1162
Msa1199270 MtrunA17_Chr3g0088821 61.928 809 273 4 1 776 272 1078 0.0 1087
Msa1199270 MtrunA17_Chr8g0352231 61.625 800 268 5 12 776 283 1078 0.0 1077
Msa1199270 MtrunA17_Chr2g0284211 60.678 796 289 7 2 775 183 976 0.0 1055
Msa1199270 MtrunA17_Chr2g0296991 59.152 825 285 7 1 776 223 1044 0.0 1050
Msa1199270 MtrunA17_Chr3g0137951 59.236 812 289 7 1 776 282 1087 0.0 1040
Msa1199270 MtrunA17_Chr8g0379241 59.647 793 299 7 2 775 198 988 0.0 1038
Msa1199270 MtrunA17_Chr1g0183381 59.490 785 305 6 1 776 124 904 0.0 1031
Msa1199270 MtrunA17_Chr8g0383701 57.791 815 296 10 1 776 290 1095 0.0 1025
Msa1199270 MtrunA17_Chr1g0201731 59.264 815 283 10 1 776 292 1096 0.0 1010
Msa1199270 MtrunA17_Chr7g0267731 58.045 808 300 5 2 776 185 986 0.0 1004
Msa1199270 MtrunA17_Chr3g0078671 56.704 813 313 7 1 776 239 1049 0.0 967
Msa1199270 MtrunA17_Chr5g0410641 46.588 850 352 15 1 759 269 1107 0.0 763
Msa1199270 MtrunA17_Chr4g0039801 45.936 849 359 19 1 759 290 1128 0.0 739
Msa1199270 MtrunA17_Chr1g0165411 44.803 837 373 16 2 759 263 1089 0.0 719
Msa1199270 MtrunA17_Chr1g0165421 43.396 848 385 14 1 759 276 1117 0.0 711
Msa1199270 MtrunA17_Chr7g0269741 43.925 856 370 17 1 759 314 1156 0.0 710
Msa1199270 MtrunA17_Chr2g0297351 43.566 847 378 18 1 759 176 1010 0.0 709
Msa1199270 MtrunA17_Chr7g0274751 39.555 809 314 22 2 759 114 798 1.23e-178 532
Msa1199270 MtrunA17_Chr3g0102531 35.692 650 354 13 16 660 38 628 9.51e-132 408
Msa1199270 MtrunA17_Chr3g0102541 34.816 652 358 14 16 660 38 629 1.76e-128 400
Msa1199270 MtrunA17_Chr2g0322371 33.559 739 419 17 29 750 47 730 1.19e-124 390
Msa1199270 MtrunA17_Chr2g0322351 33.826 745 429 16 16 750 37 727 2.05e-124 389
Msa1199270 MtrunA17_Chr4g0046401 33.377 755 428 17 6 750 41 730 3.87e-124 389
Msa1199270 MtrunA17_Chr4g0025201 34.037 711 409 13 29 728 49 710 4.74e-124 389
Msa1199270 MtrunA17_Chr2g0322361 33.829 739 422 20 29 750 52 740 1.55e-123 387
Msa1199270 MtrunA17_Chr3g0102551 32.791 738 409 18 28 747 61 729 1.67e-122 385
Msa1199270 MtrunA17_Chr1g0186381 33.288 736 413 17 29 751 60 730 5.68e-120 378
Msa1199270 MtrunA17_Chr3g0095791 31.333 750 415 19 3 734 22 689 2.29e-114 362
Msa1199270 MtrunA17_Chr3g0077511 30.686 743 438 15 1 735 20 693 1.51e-109 349
Msa1199270 MtrunA17_Chr2g0298581 30.574 749 423 16 3 734 22 690 1.72e-109 349
Msa1199270 MtrunA17_Chr2g0307191 30.914 744 429 17 3 735 22 691 8.17e-106 339
Msa1199270 MtrunA17_Chr2g0322341 43.750 304 159 5 30 333 52 343 4.76e-81 263
Msa1199270 MtrunA17_Chr2g0322331 31.143 350 228 7 409 750 27 371 3.23e-46 169
Msa1199270 MtrunA17_Chr3g0126641 37.379 206 99 5 309 485 6 210 1.73e-36 136
Msa1199270 MtrunA17_Chr0c03g0490021 49.593 123 61 1 605 727 1 122 1.97e-34 128
Msa1199270 MtrunA17_Chr2g0307241 38.217 157 88 3 3 159 22 169 1.81e-27 110
Msa1199270 MtrunA17_Chr7g0252781 63.415 82 29 1 696 776 8 89 5.29e-27 105
Msa1199270 MtrunA17_Chr8g0355061 58.621 58 23 1 605 662 1 57 3.60e-20 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199270 AT5G17420.1 67.468 790 241 5 1 776 239 1026 0.0 1155
Msa1199270 AT5G05170.1 62.005 808 273 5 1 776 260 1065 0.0 1100
Msa1199270 AT4G18780.1 60.549 801 286 6 1 776 185 980 0.0 1048
Msa1199270 AT4G32410.1 60.354 792 281 6 1 761 276 1065 0.0 1046
Msa1199270 AT2G25540.1 59.371 795 290 6 1 764 256 1048 0.0 1032
Msa1199270 AT5G64740.1 57.583 811 305 7 1 776 277 1083 0.0 1024
Msa1199270 AT2G21770.1 57.921 808 304 8 1 776 283 1086 0.0 1018
Msa1199270 AT5G09870.1 57.583 811 302 8 1 776 265 1068 0.0 1018
Msa1199270 AT4G39350.1 58.200 811 298 8 1 776 278 1082 0.0 1014
Msa1199270 AT3G03050.1 46.290 849 354 18 1 759 295 1131 0.0 744
Msa1199270 AT5G16910.1 45.670 843 365 17 1 759 298 1131 0.0 736
Msa1199270 AT2G33100.2 44.864 847 373 16 1 759 184 1024 0.0 727
Msa1199270 AT2G33100.1 44.864 847 373 16 1 759 184 1024 0.0 727
Msa1199270 AT4G38190.1 45.054 839 362 16 1 759 273 1092 0.0 721
Msa1199270 AT1G02730.1 44.936 859 364 17 1 759 319 1168 0.0 721
Msa1199270 AT1G32180.1 43.322 861 367 15 1 757 123 966 0.0 703
Msa1199270 AT1G32180.2 43.322 861 367 15 1 757 123 966 0.0 703
Msa1199270 AT5G44030.2 67.454 381 123 1 1 380 245 625 0.0 578
Msa1199270 AT5G44030.2 59.847 391 151 5 388 776 692 1078 1.93e-163 501
Msa1199270 AT5G44030.1 67.454 381 123 1 1 380 216 596 0.0 578
Msa1199270 AT5G44030.1 59.847 391 151 5 388 776 663 1049 8.05e-164 502
Msa1199270 AT5G44030.3 58.128 406 162 5 373 776 371 770 1.80e-167 503
Msa1199270 AT5G44030.3 67.508 317 102 1 65 380 1 317 1.92e-161 487
Msa1199270 AT4G23990.1 33.380 710 388 17 36 731 83 721 3.67e-122 384
Msa1199270 AT4G15320.3 33.378 752 419 22 7 728 30 729 4.60e-120 379
Msa1199270 AT4G15320.5 33.378 752 419 22 7 728 30 729 5.64e-120 379
Msa1199270 AT4G24000.1 32.254 741 410 20 36 763 61 722 3.11e-119 376
Msa1199270 AT4G24010.1 32.113 710 401 14 36 733 64 704 3.91e-119 377
Msa1199270 AT2G32620.1 32.258 744 424 17 16 731 39 730 3.63e-118 374
Msa1199270 AT2G32530.1 35.610 615 342 12 28 634 50 618 5.72e-118 374
Msa1199270 AT2G32610.1 32.088 776 445 23 7 750 27 752 1.45e-117 372
Msa1199270 AT4G15320.4 33.377 764 418 24 7 728 30 744 4.92e-117 372
Msa1199270 AT1G55850.1 30.861 755 433 15 7 747 40 719 5.88e-117 370
Msa1199270 AT4G15290.1 34.597 633 365 14 28 656 50 637 4.72e-116 369
Msa1199270 AT2G32540.1 30.993 755 443 17 28 755 50 753 3.65e-114 363
Msa1199270 AT2G32620.3 34.628 592 340 12 28 615 50 598 1.00e-112 355
Msa1199270 AT2G32620.4 32.695 679 384 15 81 731 1 634 2.35e-109 348
Msa1199270 AT4G15320.2 32.831 664 342 18 7 616 30 643 7.80e-105 340
Msa1199270 AT2G32620.2 36.436 505 278 9 28 528 50 515 4.57e-102 325
Msa1199270 AT4G15320.1 31.818 704 339 21 7 616 30 686 1.59e-97 321
Msa1199270 AT4G23990.2 31.985 519 290 10 221 731 44 507 8.39e-83 274
Msa1199270 AT4G24000.2 30.853 551 309 14 221 763 44 530 1.92e-82 273

Find 182 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCCCATTAGTCCTTTA+AGG 0.067110 8_1:-51240720 None:intergenic
CATCTTTATCCTTTCCTTAA+AGG 0.095284 8_1:+51240706 Msa1199270:CDS
GGTGGAGAAATCAACAATTT+TGG 0.111660 8_1:+51240392 Msa1199270:CDS
GAGAGAATATGAAGAGTTTA+AGG 0.157312 8_1:+51237878 Msa1199270:intron
AAATACTGTTCTTTCAATTT+TGG 0.158824 8_1:+51237422 Msa1199270:CDS
AGAAGCCATGTGTTTCTTTA+TGG 0.173329 8_1:+51238314 Msa1199270:CDS
GTGACTATATTCAACATTAT+TGG 0.220024 8_1:+51240589 Msa1199270:CDS
ATTCAAGGACCTGTTTATAT+TGG 0.233065 8_1:+51238682 Msa1199270:CDS
AAGGATACTGAAAATAAATT+TGG 0.243965 8_1:+51238952 Msa1199270:CDS
TGTCATTTGGTCTGTGCTTT+TGG 0.246086 8_1:+51240765 Msa1199270:CDS
TTTGGCTCACATCATTCATT+TGG 0.251061 8_1:-51240894 None:intergenic
ATCGGGGCTGTTCCCCTAAA+AGG 0.256199 8_1:-51239383 None:intergenic
ATGAGAGGTAATGCACTAAA+AGG 0.257323 8_1:-51239557 None:intergenic
ATTATTAATATAAGCTCTTC+AGG 0.258516 8_1:+51236481 None:intergenic
TCCTTTCCTTAAAGGACTAA+TGG 0.262867 8_1:+51240714 Msa1199270:CDS
TTCAGAAGGAAAGCTTTAAA+TGG 0.264003 8_1:+51238718 Msa1199270:CDS
GAAGAGGATGGGAGCATTAT+AGG 0.265683 8_1:+51238808 Msa1199270:CDS
TCTATTGGAGAAAGCATATT+AGG 0.270639 8_1:-51237348 None:intergenic
AACATTATTGGTATTGTTGC+TGG 0.294324 8_1:+51240601 Msa1199270:CDS
TGCAATTGTACAAGGCCTAA+TGG 0.307482 8_1:+51240444 Msa1199270:CDS
AGTCTTTCTGTAAGATTTAT+CGG 0.313208 8_1:-51239401 None:intergenic
CACCAACTCTTGTTGTCATT+TGG 0.316180 8_1:+51240752 Msa1199270:CDS
TCTTTCATACTCCAACCTTC+TGG 0.327018 8_1:-51237942 None:intergenic
TCTTTAAAGCCATACCATAT+TGG 0.330912 8_1:-51239482 None:intergenic
ACGAACTGTACACCATTAGA+TGG 0.334995 8_1:+51240539 Msa1199270:CDS
ACAAGAGGTGGTTCCTTGAT+TGG 0.346756 8_1:-51237393 None:intergenic
GACTTAACCAAGTTCTTAGA+TGG 0.349504 8_1:+51239420 Msa1199270:CDS
TTCTTTAAGTTATAATATAA+AGG 0.360128 8_1:-51236547 None:intergenic
TTGGACAGTGGCGGCTGAAT+AGG 0.364398 8_1:-51239463 None:intergenic
CGATCGATGGGAAACCATTT+GGG 0.368399 8_1:-51236927 None:intergenic
GCGATCGATGGGAAACCATT+TGG 0.369089 8_1:-51236928 None:intergenic
GCCACAACCATCATTCTATA+AGG 0.374205 8_1:-51236774 None:intergenic
CCTTTCCTTAAAGGACTAAT+GGG 0.379340 8_1:+51240715 Msa1199270:CDS
TCAGCCGCCACTGTCCAATA+TGG 0.389539 8_1:+51239468 Msa1199270:CDS
GTCTTTCTGTAAGATTTATC+GGG 0.392145 8_1:-51239400 None:intergenic
TTGGCTCACATCATTCATTT+GGG 0.393045 8_1:-51240893 None:intergenic
TATCAGTATCATGTGAAATC+TGG 0.398754 8_1:+51236874 Msa1199270:CDS
GCAATTGTACAAGGCCTAAT+GGG 0.399734 8_1:+51240445 Msa1199270:CDS
GTTGTTATAAAGATATCTAT+TGG 0.402178 8_1:-51237363 None:intergenic
TGAGATTTGATAGTCTTGAT+AGG 0.405593 8_1:+51238379 Msa1199270:CDS
CATGAATGGGGAGCATTGAT+TGG 0.408338 8_1:+51240652 Msa1199270:CDS
TTCTTTATGGACATTCAACT+TGG 0.409379 8_1:+51238327 Msa1199270:CDS
AAATAGCGGTGAACATGAAT+GGG 0.412338 8_1:+51240639 Msa1199270:CDS
GTCTGTGGTTCTCCCTTGGC+TGG 0.418366 8_1:-51241214 None:intergenic
GGACCTGTTTATATTGGATC+AGG 0.419217 8_1:+51238688 Msa1199270:CDS
TTTGTGTGATGTTGAAATGC+TGG 0.419523 8_1:-51238095 None:intergenic
CATAATATATTGTATCGTTC+CGG 0.424683 8_1:+51239577 Msa1199270:CDS
CGTACAAGTTCACTCAAAAC+AGG 0.425794 8_1:+51238777 Msa1199270:CDS
CAGTCCAAGTTGAGCACAAA+AGG 0.427635 8_1:-51238258 None:intergenic
GTAGACAGTGCTGTTAATAT+AGG 0.428519 8_1:-51239534 None:intergenic
AGTATGATACAAATACTTCT+TGG 0.430810 8_1:+51238005 Msa1199270:CDS
TGAGAAGATAGACTTTCTTA+AGG 0.431779 8_1:+51237608 Msa1199270:CDS
CAACCTGATCCAATATAAAC+AGG 0.434112 8_1:-51238691 None:intergenic
ATTGCTACTTTCCTTGATAG+TGG 0.435778 8_1:-51236732 None:intergenic
CTTCTATTCTTGAATTGAGA+TGG 0.438164 8_1:+51240347 Msa1199270:CDS
GACTGTCTTTGTGTCTGTGT+TGG 0.441991 8_1:+51241038 Msa1199270:three_prime_UTR
CAATGGCTGCTTGTCTTCAT+CGG 0.442146 8_1:-51238920 None:intergenic
CATCCAGTACCTGATGCAAT+TGG 0.442733 8_1:+51236840 Msa1199270:CDS
ATCAACTTGAGGTGTCTAGA+TGG 0.445374 8_1:+51238658 Msa1199270:CDS
TAAATAGCGGTGAACATGAA+TGG 0.448788 8_1:+51240638 Msa1199270:CDS
TTTGTGTTGTTTCCTGGCCA+TGG 0.452165 8_1:-51237972 None:intergenic
AGAAGTATTTGTATCATACT+TGG 0.453336 8_1:-51238002 None:intergenic
AGTCCAATTGCATCAGGTAC+TGG 0.453883 8_1:-51236843 None:intergenic
AATTCTTCATTGACAGAAGA+AGG 0.454952 8_1:+51238994 Msa1199270:CDS
TAATAGTACTGTCCATCTAA+TGG 0.456212 8_1:-51240551 None:intergenic
GTTCTCCCTTGGCTGGTGCT+AGG 0.457232 8_1:-51241207 None:intergenic
AAAAGAACGCCGTGCTATGA+AGG 0.457764 8_1:+51237653 Msa1199270:CDS
GTCTATTCAGCTTCGTGTAT+CGG 0.462638 8_1:+51238218 Msa1199270:intron
AAGGTATGTCTCGCGATCGA+TGG 0.462733 8_1:-51236940 None:intergenic
GGCCTAATGGGAAGATTCCT+TGG 0.464882 8_1:+51240457 Msa1199270:CDS
CTACCGCCCATCTAAGAACT+TGG 0.464902 8_1:-51239427 None:intergenic
TACCTGATGCAATTGGACTT+TGG 0.472918 8_1:+51236847 Msa1199270:CDS
CCCATTAGTCCTTTAAGGAA+AGG 0.477537 8_1:-51240715 None:intergenic
CATCTCTTTGCAATTGTACA+AGG 0.478702 8_1:+51240436 Msa1199270:CDS
AGGAAAGTAGCAATACCTTC+AGG 0.479655 8_1:+51236741 Msa1199270:five_prime_UTR
CCTCGTATCCCCAGAGTGTC+CGG 0.480388 8_1:-51239092 None:intergenic
TTAAACTCGCCATCATCGTC+TGG 0.482309 8_1:-51240517 None:intergenic
AACCAAAGTCCAATTGCATC+AGG 0.483430 8_1:-51236849 None:intergenic
GCTATGAAGACCGGACACTC+TGG 0.486840 8_1:+51239082 Msa1199270:CDS
AGGTGTCTAGATGGAATTCA+AGG 0.487734 8_1:+51238667 Msa1199270:CDS
ACCTTGACCGCCTTTCAGTC+AGG 0.487974 8_1:+51236958 Msa1199270:CDS
CAGGATGAAAATGAAGAGGA+TGG 0.490027 8_1:+51238796 Msa1199270:CDS
AGGTATGTCTCGCGATCGAT+GGG 0.490485 8_1:-51236939 None:intergenic
AAATGGCTTTGATCCTCCTA+AGG 0.493222 8_1:+51238735 Msa1199270:CDS
TGTTTCTTGAAGTGCTTCAA+AGG 0.493651 8_1:-51237508 None:intergenic
TACCAAGGAATCTTCCCATT+AGG 0.495635 8_1:-51240459 None:intergenic
CTAGAAATGTAGACAAGAGA+TGG 0.496482 8_1:-51238062 None:intergenic
GTGTGTCTGTGGTTCTCCCT+TGG 0.498140 8_1:-51241218 None:intergenic
ACTCAAAGAAGAGTAATAGA+AGG 0.500130 8_1:-51236806 None:intergenic
TTCTCAGAGAAATACTTCTC+AGG 0.500963 8_1:-51237591 None:intergenic
TGTTAATATAGGCAATCCTT+TGG 0.504205 8_1:-51239523 None:intergenic
ATTCCACATTGCTTAACATC+AGG 0.508229 8_1:-51240847 None:intergenic
CTACAGGTTGGTATGAGCTA+TGG 0.509614 8_1:+51239278 Msa1199270:intron
CGCCACTGTCCAATATGGTA+TGG 0.510036 8_1:+51239473 Msa1199270:CDS
CTATGAAGACCGGACACTCT+GGG 0.511444 8_1:+51239083 Msa1199270:CDS
TAAGTCATCACAACCTCACT+TGG 0.512655 8_1:-51241157 None:intergenic
ATGAATGGGGAGCATTGATT+GGG 0.513295 8_1:+51240653 Msa1199270:CDS
TCAAGAAGTCCTGCTTAAAG+AGG 0.515226 8_1:+51239038 Msa1199270:CDS
ATGGAGTGGAGTTAGTCTTG+AGG 0.520262 8_1:+51240366 Msa1199270:CDS
AGGACTTCTTGAGTTGAAGA+AGG 0.520603 8_1:-51239027 None:intergenic
CTTCTCAGGTGCTCGCGGCT+CGG 0.527752 8_1:-51237577 None:intergenic
CATGAATGGCCTCTTTAAGC+AGG 0.528536 8_1:-51239047 None:intergenic
GAGTTAGTCTTGAGGAATGG+TGG 0.529431 8_1:+51240374 Msa1199270:CDS
TCATGTTACGTTTCTGATGA+CGG 0.530499 8_1:+51237471 Msa1199270:CDS
ACCTGACTGAAAGGCGGTCA+AGG 0.530876 8_1:-51236959 None:intergenic
TACTTGATCAGATTCCCAAA+TGG 0.531951 8_1:+51236913 Msa1199270:CDS
TACCAAGGCGTTCATTGCAC+CGG 0.533585 8_1:-51238120 None:intergenic
TGAGAGGTAATGCACTAAAA+GGG 0.533913 8_1:-51239556 None:intergenic
ATTCTTGAATTGAGATGGAG+TGG 0.534682 8_1:+51240352 Msa1199270:CDS
ATATGGTATGGCTTTAAAGA+AGG 0.537283 8_1:+51239485 Msa1199270:CDS
AAACTAGACAGCCACTATCA+AGG 0.537495 8_1:+51236721 Msa1199270:five_prime_UTR
GCAGCCATTGCAATTAGATA+AGG 0.538570 8_1:+51238933 Msa1199270:CDS
GAAGACTCAAGCTGCTCCAA+AGG 0.538861 8_1:+51239507 Msa1199270:CDS
TTATTAATATAAGCTCTTCA+GGG 0.539192 8_1:+51236482 None:intergenic
TAAAGATGCATACTCGTGGT+TGG 0.547631 8_1:+51239330 Msa1199270:CDS
TTCATACTCCAACCTTCTGG+TGG 0.549424 8_1:-51237939 None:intergenic
ACTCAGTCCTTATAGAATGA+TGG 0.551671 8_1:+51236767 Msa1199270:exon
TCAGTGAGCAAGCAGACAGC+CGG 0.552176 8_1:-51239596 None:intergenic
GTAGAGAATTGTTTACAGAA+AGG 0.552263 8_1:-51237555 None:intergenic
AAAGATGAAACACCATGGCC+AGG 0.552946 8_1:+51237960 Msa1199270:CDS
GTTTGTTGTTTGACACGTGT+TGG 0.553632 8_1:+51240977 Msa1199270:three_prime_UTR
AGCCGGTGCAATGAACGCCT+TGG 0.555691 8_1:+51238118 Msa1199270:CDS
AATATAGTCACTGTGGTTGG+AGG 0.557077 8_1:-51240577 None:intergenic
AAGTGCTTCAAAGGTGAGCA+TGG 0.557216 8_1:-51237499 None:intergenic
GATCAGGTTGTATATTCAGA+AGG 0.562306 8_1:+51238704 Msa1199270:CDS
TGAGAGTTCCACCAGAAGGT+TGG 0.563498 8_1:+51237931 Msa1199270:CDS
TGTATATCTGTGTGTGTCTG+TGG 0.564985 8_1:-51241229 None:intergenic
TCCTTATAGAATGATGGTTG+TGG 0.565499 8_1:+51236773 Msa1199270:exon
TCTCAATTCAAGAATAGAAG+AGG 0.566349 8_1:-51240344 None:intergenic
AGCTTCAGGACCTGACTGAA+AGG 0.568052 8_1:-51236968 None:intergenic
AACAACCGCAGATCCAATCA+AGG 0.570577 8_1:+51237380 Msa1199270:CDS
GCTACAACTCATGACATGAA+TGG 0.571491 8_1:-51239061 None:intergenic
GTATCCTTATCTAATTGCAA+TGG 0.575951 8_1:-51238937 None:intergenic
CACAATGGAGGAGACAATGA+AGG 0.576558 8_1:+51238029 Msa1199270:CDS
ACTGAACCTAGCACCAGCCA+AGG 0.579388 8_1:+51241201 Msa1199270:three_prime_UTR
GCATACTCGTGGTTGGAGAT+CGG 0.580977 8_1:+51239337 Msa1199270:CDS
TTTCAACATCACACAAAAGC+CGG 0.582214 8_1:+51238101 Msa1199270:CDS
CTGTGTAACATGATGAATGC+AGG 0.583706 8_1:+51236691 Msa1199270:five_prime_UTR
CAAATACTTCTTGGTCACAA+TGG 0.585710 8_1:+51238014 Msa1199270:CDS
TCTTTATGGACATTCAACTT+GGG 0.586661 8_1:+51238328 Msa1199270:CDS
AAATCTGGCTTGCATTGTCA+TGG 0.586979 8_1:+51236889 Msa1199270:CDS
ACTTAACCAAGTTCTTAGAT+GGG 0.587229 8_1:+51239421 Msa1199270:CDS
ACATTTCAACATTGTATCGA+AGG 0.591248 8_1:+51240492 Msa1199270:CDS
TTGAATATAGTCACTGTGGT+TGG 0.591335 8_1:-51240580 None:intergenic
AGGATGAAAATGAAGAGGAT+GGG 0.604235 8_1:+51238797 Msa1199270:CDS
TCTTTCTGTAAGATTTATCG+GGG 0.605187 8_1:-51239399 None:intergenic
TGGTTCCTTGATTGGATCTG+CGG 0.606117 8_1:-51237385 None:intergenic
GTATTTGCTGTAACAAGAGG+TGG 0.607414 8_1:-51237405 None:intergenic
AAAACAGGATGAAAATGAAG+AGG 0.608147 8_1:+51238792 Msa1199270:CDS
GACCAAATGACAACAAGAGT+TGG 0.608552 8_1:-51240754 None:intergenic
AAATACTTCTCAGGTGCTCG+CGG 0.609482 8_1:-51237582 None:intergenic
ACAGTATTTGCTGTAACAAG+AGG 0.609520 8_1:-51237408 None:intergenic
TGAGTTGTAGCTATGAAGAC+CGG 0.612993 8_1:+51239073 Msa1199270:CDS
CAAGTTCTTAGATGGGCGGT+AGG 0.615703 8_1:+51239428 Msa1199270:CDS
TTGGTGCTTCATAGCATGCA+AGG 0.619337 8_1:+51241057 Msa1199270:three_prime_UTR
GGTGAGAATAAATGCGCTTG+TGG 0.620185 8_1:+51237899 Msa1199270:CDS
ATAGAATGATGGTTGTGGCA+AGG 0.625809 8_1:+51236778 Msa1199270:exon
TGATAAATTCATCACACCAT+CGG 0.631900 8_1:+51239616 Msa1199270:CDS
TCTATGAGAGTTCCACCAGA+AGG 0.634150 8_1:+51237927 Msa1199270:CDS
ACGATACAATATATTATGAG+AGG 0.640556 8_1:-51239572 None:intergenic
GTGGAGTTAGTCTTGAGGAA+TGG 0.641187 8_1:+51240371 Msa1199270:CDS
ATACTTCTTGGTCACAATGG+AGG 0.641421 8_1:+51238017 Msa1199270:CDS
TTCACAGATGCTATAAATAG+CGG 0.641791 8_1:+51240625 Msa1199270:CDS
GGGCCTGATGTTAAGCAATG+TGG 0.646332 8_1:+51240844 Msa1199270:CDS
GTCAATTCTTACCCAAACCA+AGG 0.652742 8_1:-51240800 None:intergenic
TAACCAAGTTCTTAGATGGG+CGG 0.655481 8_1:+51239424 Msa1199270:CDS
TTCAGGACCTGACTGAAAGG+CGG 0.662584 8_1:-51236965 None:intergenic
TAAGGACTGAGTCTTCCTGA+AGG 0.664582 8_1:-51236756 None:intergenic
AATGTGCATTAAATCTACCA+AGG 0.668204 8_1:-51240474 None:intergenic
TGGTGCTTCATAGCATGCAA+GGG 0.671390 8_1:+51241058 Msa1199270:three_prime_UTR
TGGTACCAACCTTCATAGCA+CGG 0.674643 8_1:-51237662 None:intergenic
TCTTCATTGACAGAAGAAGG+TGG 0.675555 8_1:+51238997 Msa1199270:CDS
TCAAGACTATCAAATCTCAG+TGG 0.677780 8_1:-51238375 None:intergenic
AGTTTAAAGATGCATACTCG+TGG 0.684752 8_1:+51239326 Msa1199270:CDS
CTGAACCTAGCACCAGCCAA+GGG 0.688851 8_1:+51241202 Msa1199270:three_prime_UTR
TATGAAGACCGGACACTCTG+GGG 0.695517 8_1:+51239084 Msa1199270:CDS
CATACCATATTGGACAGTGG+CGG 0.705560 8_1:-51239472 None:intergenic
AATGTCCATAAAGAAACACA+TGG 0.711721 8_1:-51238319 None:intergenic
AGCCATACCATATTGGACAG+TGG 0.714363 8_1:-51239475 None:intergenic
AATAGCGGTGAACATGAATG+GGG 0.729849 8_1:+51240640 Msa1199270:CDS
AATGTTGAATATAGTCACTG+TGG 0.751089 8_1:-51240584 None:intergenic
GTATGAAAGATGAAACACCA+TGG 0.766312 8_1:+51237955 Msa1199270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTTAAGTTATAATATAA+AGG - chr8_1:51236550-51236569 None:intergenic 10.0%
!!! AAATAAAATAGTGTTTTTGT+TGG - chr8_1:51238418-51238437 None:intergenic 15.0%
!! AATTGTTATATACATGAAAA+GGG - chr8_1:51238878-51238897 None:intergenic 15.0%
!! TAATTGTTATATACATGAAA+AGG - chr8_1:51238879-51238898 None:intergenic 15.0%
!! AAATAAAAATTATACATGCA+TGG + chr8_1:51239679-51239698 Msa1199270:intron 15.0%
!!! TTTTTGAGATATTTTAAAAG+TGG + chr8_1:51239729-51239748 Msa1199270:intron 15.0%
!! CTTTGTAAAAATATTGTTAT+TGG + chr8_1:51239837-51239856 Msa1199270:intron 15.0%
!!! TAGTTTTGTGTTTTTTTTAA+CGG - chr8_1:51239879-51239898 None:intergenic 15.0%
!! TAAAAAAAACACAAAACTAA+CGG + chr8_1:51239880-51239899 Msa1199270:intron 15.0%
!! AGTTAATAATAAGAGATTAA+GGG - chr8_1:51240229-51240248 None:intergenic 15.0%
!! TAGTTAATAATAAGAGATTA+AGG - chr8_1:51240230-51240249 None:intergenic 15.0%
!!! ATTTCACAAAATTTTTCTTT+TGG - chr8_1:51240915-51240934 None:intergenic 15.0%
!! TGAAATTATGAATTACATCA+AGG + chr8_1:51237147-51237166 Msa1199270:intron 20.0%
!! GTTGTTATAAAGATATCTAT+TGG - chr8_1:51237366-51237385 None:intergenic 20.0%
!!! AAATACTGTTCTTTCAATTT+TGG + chr8_1:51237422-51237441 Msa1199270:CDS 20.0%
!!! ATGTTATTTGAACATCAATT+TGG + chr8_1:51237707-51237726 Msa1199270:intron 20.0%
!!! TGTTATTTGAACATCAATTT+GGG + chr8_1:51237708-51237727 Msa1199270:intron 20.0%
!!! GAATTTGACAACTTTTTAAA+TGG - chr8_1:51237756-51237775 None:intergenic 20.0%
!! AATTGAAATGTAAATTACCA+AGG - chr8_1:51238138-51238157 None:intergenic 20.0%
!! AAGGATACTGAAAATAAATT+TGG + chr8_1:51238952-51238971 Msa1199270:CDS 20.0%
!! TGTATTCATAACAATTTAGA+TGG - chr8_1:51239248-51239267 None:intergenic 20.0%
!!! TTCTATTTTATACATTCTCA+CGG + chr8_1:51239651-51239670 Msa1199270:intron 20.0%
!!! TTTTTTTAACGGAAAGTTAA+CGG - chr8_1:51239868-51239887 None:intergenic 20.0%
!!! TTATATTTTATCCCTTGTTA+TGG + chr8_1:51240131-51240150 Msa1199270:intron 20.0%
!! TCAATTAAGTTTAACCAAAT+AGG + chr8_1:51240203-51240222 Msa1199270:intron 20.0%
!! GTTTACAAATAATATTGTTC+AGG + chr8_1:51240270-51240289 Msa1199270:intron 20.0%
!!! ACTTGTGATTTTTCATTTTT+TGG + chr8_1:51241132-51241151 Msa1199270:three_prime_UTR 20.0%
! AACTTTCACAACTATTGTTT+CGG + chr8_1:51237222-51237241 Msa1199270:intron 25.0%
!!! TAACATGAAATTTTGTTTGC+AGG - chr8_1:51237459-51237478 None:intergenic 25.0%
!! ACAGTTATTTGAGATCAATT+TGG - chr8_1:51237786-51237805 None:intergenic 25.0%
!!! AGAAGTATTTGTATCATACT+TGG - chr8_1:51238005-51238024 None:intergenic 25.0%
! AGTATGATACAAATACTTCT+TGG + chr8_1:51238005-51238024 Msa1199270:CDS 25.0%
! CATTCACACAAATACAATTA+AGG - chr8_1:51238592-51238611 None:intergenic 25.0%
! CTTAATTGTATTTGTGTGAA+TGG + chr8_1:51238590-51238609 Msa1199270:intron 25.0%
! AGTCTTTCTGTAAGATTTAT+CGG - chr8_1:51239404-51239423 None:intergenic 25.0%
! ACGATACAATATATTATGAG+AGG - chr8_1:51239575-51239594 None:intergenic 25.0%
! CATAATATATTGTATCGTTC+CGG + chr8_1:51239577-51239596 Msa1199270:CDS 25.0%
! GTGAGAATGTATAAAATAGA+AGG - chr8_1:51239652-51239671 None:intergenic 25.0%
! TAAAAATTATACATGCATGG+TGG + chr8_1:51239682-51239701 Msa1199270:intron 25.0%
!!! CAATATTTTTACAAAGTGCA+AGG - chr8_1:51239833-51239852 None:intergenic 25.0%
!!! ATATGCTATTTCCATAACAA+GGG - chr8_1:51240145-51240164 None:intergenic 25.0%
!!! TATATGCTATTTCCATAACA+AGG - chr8_1:51240146-51240165 None:intergenic 25.0%
! TTTGTAAACACGATGAATAA+TGG - chr8_1:51240259-51240278 None:intergenic 25.0%
! ACAAATAATATTGTTCAGGT+AGG + chr8_1:51240274-51240293 Msa1199270:intron 25.0%
! GTGACTATATTCAACATTAT+TGG + chr8_1:51240589-51240608 Msa1199270:CDS 25.0%
!! GAAATTGTTCTTTTCTTCAT+GGG + chr8_1:51240675-51240694 Msa1199270:CDS 25.0%
ACTCAAAGAAGAGTAATAGA+AGG - chr8_1:51236809-51236828 None:intergenic 30.0%
TATCAGTATCATGTGAAATC+TGG + chr8_1:51236874-51236893 Msa1199270:CDS 30.0%
ATGAGAGTAAAATAAGCTTC+AGG - chr8_1:51236985-51237004 None:intergenic 30.0%
TCTATCACACATAGTAATAG+AGG - chr8_1:51237085-51237104 None:intergenic 30.0%
! ATTACATCAAGGAGTACATA+AGG + chr8_1:51237158-51237177 Msa1199270:intron 30.0%
! TCTATTGGAGAAAGCATATT+AGG - chr8_1:51237351-51237370 None:intergenic 30.0%
GTAGAGAATTGTTTACAGAA+AGG - chr8_1:51237558-51237577 None:intergenic 30.0%
TGAGAAGATAGACTTTCTTA+AGG + chr8_1:51237608-51237627 Msa1199270:CDS 30.0%
TCTCTCTGTTAGAAAAGTAA+GGG - chr8_1:51237864-51237883 None:intergenic 30.0%
TTCTCTCTGTTAGAAAAGTA+AGG - chr8_1:51237865-51237884 None:intergenic 30.0%
GAGAGAATATGAAGAGTTTA+AGG + chr8_1:51237878-51237897 Msa1199270:intron 30.0%
AATGTCCATAAAGAAACACA+TGG - chr8_1:51238322-51238341 None:intergenic 30.0%
TTCTTTATGGACATTCAACT+TGG + chr8_1:51238327-51238346 Msa1199270:CDS 30.0%
TCTTTATGGACATTCAACTT+GGG + chr8_1:51238328-51238347 Msa1199270:CDS 30.0%
! TGAGATTTGATAGTCTTGAT+AGG + chr8_1:51238379-51238398 Msa1199270:CDS 30.0%
GTAGCAAATGATTTAAACTG+TGG - chr8_1:51238451-51238470 None:intergenic 30.0%
TGACACTGAAATCTAAAAAC+TGG - chr8_1:51238524-51238543 None:intergenic 30.0%
! TTCAGTGTCATTATTGTGTA+TGG + chr8_1:51238534-51238553 Msa1199270:intron 30.0%
GCGGAAAAACAAAATAGAAA+GGG - chr8_1:51238636-51238655 None:intergenic 30.0%
TGCGGAAAAACAAAATAGAA+AGG - chr8_1:51238637-51238656 None:intergenic 30.0%
ATTCAAGGACCTGTTTATAT+TGG + chr8_1:51238682-51238701 Msa1199270:CDS 30.0%
!! TTCAGAAGGAAAGCTTTAAA+TGG + chr8_1:51238718-51238737 Msa1199270:CDS 30.0%
AAAACAGGATGAAAATGAAG+AGG + chr8_1:51238792-51238811 Msa1199270:CDS 30.0%
GTATCCTTATCTAATTGCAA+TGG - chr8_1:51238940-51238959 None:intergenic 30.0%
AATTCTTCATTGACAGAAGA+AGG + chr8_1:51238994-51239013 Msa1199270:CDS 30.0%
AATTTCAGCAACACTTTGAA+TGG + chr8_1:51239162-51239181 Msa1199270:intron 30.0%
!!! AATACACTTTTTCCATCTAC+AGG + chr8_1:51239262-51239281 Msa1199270:intron 30.0%
TCTTTCTGTAAGATTTATCG+GGG - chr8_1:51239402-51239421 None:intergenic 30.0%
GTCTTTCTGTAAGATTTATC+GGG - chr8_1:51239403-51239422 None:intergenic 30.0%
ACTTAACCAAGTTCTTAGAT+GGG + chr8_1:51239421-51239440 Msa1199270:CDS 30.0%
!! TCTTTAAAGCCATACCATAT+TGG - chr8_1:51239485-51239504 None:intergenic 30.0%
!! ATATGGTATGGCTTTAAAGA+AGG + chr8_1:51239485-51239504 Msa1199270:CDS 30.0%
TGTTAATATAGGCAATCCTT+TGG - chr8_1:51239526-51239545 None:intergenic 30.0%
TGATAAATTCATCACACCAT+CGG + chr8_1:51239616-51239635 Msa1199270:CDS 30.0%
AAGTGGTTTAAATGTGTCAT+TGG + chr8_1:51239746-51239765 Msa1199270:intron 30.0%
!!! TTTTCATCCGATTTTGACTT+TGG + chr8_1:51239777-51239796 Msa1199270:intron 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG + chr8_1:51239806-51239825 Msa1199270:intron 30.0%
TCTCAATTCAAGAATAGAAG+AGG - chr8_1:51240347-51240366 None:intergenic 30.0%
CTTCTATTCTTGAATTGAGA+TGG + chr8_1:51240347-51240366 Msa1199270:CDS 30.0%
! GTGGAGAAATCAACAATTTT+GGG + chr8_1:51240393-51240412 Msa1199270:CDS 30.0%
!! AATCAACAATTTTGGGTCAT+TGG + chr8_1:51240400-51240419 Msa1199270:CDS 30.0%
AATGTGCATTAAATCTACCA+AGG - chr8_1:51240477-51240496 None:intergenic 30.0%
ACATTTCAACATTGTATCGA+AGG + chr8_1:51240492-51240511 Msa1199270:CDS 30.0%
TAATAGTACTGTCCATCTAA+TGG - chr8_1:51240554-51240573 None:intergenic 30.0%
AATGTTGAATATAGTCACTG+TGG - chr8_1:51240587-51240606 None:intergenic 30.0%
AACATTATTGGTATTGTTGC+TGG + chr8_1:51240601-51240620 Msa1199270:CDS 30.0%
TTCACAGATGCTATAAATAG+CGG + chr8_1:51240625-51240644 Msa1199270:CDS 30.0%
! GGAAATTGTTCTTTTCTTCA+TGG + chr8_1:51240674-51240693 Msa1199270:CDS 30.0%
CATCTTTATCCTTTCCTTAA+AGG + chr8_1:51240706-51240725 Msa1199270:CDS 30.0%
! TTCTATCTTTTCCTTGGTTT+GGG + chr8_1:51240789-51240808 Msa1199270:CDS 30.0%
!! CCTTAGTTTTCAACACAAAA+GGG - chr8_1:51240825-51240844 None:intergenic 30.0%
! CCTTTTGTGTTGAAAACTAA+GGG + chr8_1:51240823-51240842 Msa1199270:CDS 30.0%
! CTTTTGTGTTGAAAACTAAG+GGG + chr8_1:51240824-51240843 Msa1199270:CDS 30.0%
!! ATTGCTACTTTCCTTGATAG+TGG - chr8_1:51236735-51236754 None:intergenic 35.0%
ACTCAGTCCTTATAGAATGA+TGG + chr8_1:51236767-51236786 Msa1199270:exon 35.0%
TCCTTATAGAATGATGGTTG+TGG + chr8_1:51236773-51236792 Msa1199270:exon 35.0%
TACTTGATCAGATTCCCAAA+TGG + chr8_1:51236913-51236932 Msa1199270:CDS 35.0%
!! ATTTACTTTTCGCTTATCCG+TGG - chr8_1:51237110-51237129 None:intergenic 35.0%
ATAAGGCTTGTATAGTCAAC+TGG + chr8_1:51237175-51237194 Msa1199270:intron 35.0%
TTTCACAACTATTGTTTCGG+AGG + chr8_1:51237225-51237244 Msa1199270:intron 35.0%
TTCACAACTATTGTTTCGGA+GGG + chr8_1:51237226-51237245 Msa1199270:intron 35.0%
AAGTTTGACATCGTAACCTT+AGG - chr8_1:51237267-51237286 None:intergenic 35.0%
!! AGCATATTAGGCTTGTTTTC+TGG - chr8_1:51237339-51237358 None:intergenic 35.0%
!! ACAGTATTTGCTGTAACAAG+AGG - chr8_1:51237411-51237430 None:intergenic 35.0%
TCATGTTACGTTTCTGATGA+CGG + chr8_1:51237471-51237490 Msa1199270:CDS 35.0%
! TGTTTCTTGAAGTGCTTCAA+AGG - chr8_1:51237511-51237530 None:intergenic 35.0%
AGCTGAATTTGCGCAAAAAT+GGG + chr8_1:51237530-51237549 Msa1199270:CDS 35.0%
TTCTCAGAGAAATACTTCTC+AGG - chr8_1:51237594-51237613 None:intergenic 35.0%
CTGTAATTTAGTGCATGCTA+TGG - chr8_1:51237685-51237704 None:intergenic 35.0%
CTCTCTGTTAGAAAAGTAAG+GGG - chr8_1:51237863-51237882 None:intergenic 35.0%
GTATGAAAGATGAAACACCA+TGG + chr8_1:51237955-51237974 Msa1199270:CDS 35.0%
!!! TGATCTTTTGTGTTGTTTCC+TGG - chr8_1:51237981-51238000 None:intergenic 35.0%
CAAATACTTCTTGGTCACAA+TGG + chr8_1:51238014-51238033 Msa1199270:CDS 35.0%
CTAGAAATGTAGACAAGAGA+TGG - chr8_1:51238065-51238084 None:intergenic 35.0%
TTTGTGTGATGTTGAAATGC+TGG - chr8_1:51238098-51238117 None:intergenic 35.0%
TTTCAACATCACACAAAAGC+CGG + chr8_1:51238101-51238120 Msa1199270:CDS 35.0%
AGAAGCCATGTGTTTCTTTA+TGG + chr8_1:51238314-51238333 Msa1199270:CDS 35.0%
TCAAGACTATCAAATCTCAG+TGG - chr8_1:51238378-51238397 None:intergenic 35.0%
ATGTAACCACATAACATGTC+AGG - chr8_1:51238473-51238492 None:intergenic 35.0%
CTGGTAACAGTTTAAGCAAA+TGG - chr8_1:51238505-51238524 None:intergenic 35.0%
CAACCTGATCCAATATAAAC+AGG - chr8_1:51238694-51238713 None:intergenic 35.0%
! GATCAGGTTGTATATTCAGA+AGG + chr8_1:51238704-51238723 Msa1199270:CDS 35.0%
AGGATGAAAATGAAGAGGAT+GGG + chr8_1:51238797-51238816 Msa1199270:CDS 35.0%
! CCTGAACTTGTATTTGAAGT+TGG - chr8_1:51239192-51239211 None:intergenic 35.0%
CCAACTTCAAATACAAGTTC+AGG + chr8_1:51239189-51239208 Msa1199270:intron 35.0%
AGTTTAAAGATGCATACTCG+TGG + chr8_1:51239326-51239345 Msa1199270:CDS 35.0%
GACTTAACCAAGTTCTTAGA+TGG + chr8_1:51239420-51239439 Msa1199270:CDS 35.0%
! GTAGACAGTGCTGTTAATAT+AGG - chr8_1:51239537-51239556 None:intergenic 35.0%
TGAGAGGTAATGCACTAAAA+GGG - chr8_1:51239559-51239578 None:intergenic 35.0%
ATGAGAGGTAATGCACTAAA+AGG - chr8_1:51239560-51239579 None:intergenic 35.0%
AGAAGGAAATTGATTACCGA+TGG - chr8_1:51239635-51239654 None:intergenic 35.0%
CAAAATCGGATGAAAATGCA+GGG - chr8_1:51239773-51239792 None:intergenic 35.0%
TCAAAATCGGATGAAAATGC+AGG - chr8_1:51239774-51239793 None:intergenic 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG + chr8_1:51239800-51239819 Msa1199270:intron 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG - chr8_1:51239804-51239823 None:intergenic 35.0%
! TGCCAAACAAAAAAAAGTGC+AGG - chr8_1:51239805-51239824 None:intergenic 35.0%
TTTAACGGAAAGTTAACGGA+GGG - chr8_1:51239864-51239883 None:intergenic 35.0%
! TTTTAACGGAAAGTTAACGG+AGG - chr8_1:51239865-51239884 None:intergenic 35.0%
TAAGAGATTAAGGGCCTATT+TGG - chr8_1:51240220-51240239 None:intergenic 35.0%
ATTCTTGAATTGAGATGGAG+TGG + chr8_1:51240352-51240371 Msa1199270:CDS 35.0%
! GGTGGAGAAATCAACAATTT+TGG + chr8_1:51240392-51240411 Msa1199270:CDS 35.0%
CATCTCTTTGCAATTGTACA+AGG + chr8_1:51240436-51240455 Msa1199270:CDS 35.0%
TTGAATATAGTCACTGTGGT+TGG - chr8_1:51240583-51240602 None:intergenic 35.0%
TAAATAGCGGTGAACATGAA+TGG + chr8_1:51240638-51240657 Msa1199270:CDS 35.0%
AAATAGCGGTGAACATGAAT+GGG + chr8_1:51240639-51240658 Msa1199270:CDS 35.0%
TCCTTTCCTTAAAGGACTAA+TGG + chr8_1:51240714-51240733 Msa1199270:CDS 35.0%
CCTTTCCTTAAAGGACTAAT+GGG + chr8_1:51240715-51240734 Msa1199270:CDS 35.0%
!! TTTGGCTTCTATCTTTTCCT+TGG + chr8_1:51240783-51240802 Msa1199270:CDS 35.0%
! CTTCTATCTTTTCCTTGGTT+TGG + chr8_1:51240788-51240807 Msa1199270:CDS 35.0%
! CCCTTTTGTGTTGAAAACTA+AGG + chr8_1:51240822-51240841 Msa1199270:CDS 35.0%
!! CCCTTAGTTTTCAACACAAA+AGG - chr8_1:51240826-51240845 None:intergenic 35.0%
ATTCCACATTGCTTAACATC+AGG - chr8_1:51240850-51240869 None:intergenic 35.0%
TTGGCTCACATCATTCATTT+GGG - chr8_1:51240896-51240915 None:intergenic 35.0%
! TTTGGCTCACATCATTCATT+TGG - chr8_1:51240897-51240916 None:intergenic 35.0%
CTGTGTAACATGATGAATGC+AGG + chr8_1:51236691-51236710 Msa1199270:five_prime_UTR 40.0%
AAACTAGACAGCCACTATCA+AGG + chr8_1:51236721-51236740 Msa1199270:five_prime_UTR 40.0%
AGGAAAGTAGCAATACCTTC+AGG + chr8_1:51236741-51236760 Msa1199270:five_prime_UTR 40.0%
GCCACAACCATCATTCTATA+AGG - chr8_1:51236777-51236796 None:intergenic 40.0%
ATAGAATGATGGTTGTGGCA+AGG + chr8_1:51236778-51236797 Msa1199270:exon 40.0%
TACCTGATGCAATTGGACTT+TGG + chr8_1:51236847-51236866 Msa1199270:CDS 40.0%
AACCAAAGTCCAATTGCATC+AGG - chr8_1:51236852-51236871 None:intergenic 40.0%
! AAATCTGGCTTGCATTGTCA+TGG + chr8_1:51236889-51236908 Msa1199270:CDS 40.0%
ACTATGTGTGATAGAAGCCA+CGG + chr8_1:51237090-51237109 Msa1199270:intron 40.0%
TCACAACTATTGTTTCGGAG+GGG + chr8_1:51237227-51237246 Msa1199270:intron 40.0%
GCATTACAATTAAGTCCAGC+TGG - chr8_1:51237307-51237326 None:intergenic 40.0%
GCTGGACTTAATTGTAATGC+AGG + chr8_1:51237307-51237326 Msa1199270:intron 40.0%
!! GTATTTGCTGTAACAAGAGG+TGG - chr8_1:51237408-51237427 None:intergenic 40.0%
CAGCTGAATTTGCGCAAAAA+TGG + chr8_1:51237529-51237548 Msa1199270:CDS 40.0%
TCTTTCATACTCCAACCTTC+TGG - chr8_1:51237945-51237964 None:intergenic 40.0%
ATACTTCTTGGTCACAATGG+AGG + chr8_1:51238017-51238036 Msa1199270:CDS 40.0%
GTCTATTCAGCTTCGTGTAT+CGG + chr8_1:51238218-51238237 Msa1199270:intron 40.0%
TTGCTACCTGACATGTTATG+TGG + chr8_1:51238464-51238483 Msa1199270:intron 40.0%
! TTTTTCCGCAGATCAACTTG+AGG + chr8_1:51238647-51238666 Msa1199270:intron 40.0%
! ATCAACTTGAGGTGTCTAGA+TGG + chr8_1:51238658-51238677 Msa1199270:CDS 40.0%
AGGTGTCTAGATGGAATTCA+AGG + chr8_1:51238667-51238686 Msa1199270:CDS 40.0%
GGACCTGTTTATATTGGATC+AGG + chr8_1:51238688-51238707 Msa1199270:CDS 40.0%
!! AAATGGCTTTGATCCTCCTA+AGG + chr8_1:51238735-51238754 Msa1199270:CDS 40.0%
CGTACAAGTTCACTCAAAAC+AGG + chr8_1:51238777-51238796 Msa1199270:CDS 40.0%
CAGGATGAAAATGAAGAGGA+TGG + chr8_1:51238796-51238815 Msa1199270:CDS 40.0%
GCAGCCATTGCAATTAGATA+AGG + chr8_1:51238933-51238952 Msa1199270:CDS 40.0%
TCTTCATTGACAGAAGAAGG+TGG + chr8_1:51238997-51239016 Msa1199270:CDS 40.0%
!! AGGACTTCTTGAGTTGAAGA+AGG - chr8_1:51239030-51239049 None:intergenic 40.0%
TCAAGAAGTCCTGCTTAAAG+AGG + chr8_1:51239038-51239057 Msa1199270:CDS 40.0%
GCTACAACTCATGACATGAA+TGG - chr8_1:51239064-51239083 None:intergenic 40.0%
TGAGTTGTAGCTATGAAGAC+CGG + chr8_1:51239073-51239092 Msa1199270:CDS 40.0%
!!! CACTTTTTCCATCTACAGGT+TGG + chr8_1:51239266-51239285 Msa1199270:intron 40.0%
TAAAGATGCATACTCGTGGT+TGG + chr8_1:51239330-51239349 Msa1199270:CDS 40.0%
TAACCAAGTTCTTAGATGGG+CGG + chr8_1:51239424-51239443 Msa1199270:CDS 40.0%
GCAAGTACGTATGAGTAGTA+TGG - chr8_1:51239984-51240003 None:intergenic 40.0%
TGCAATTGTACAAGGCCTAA+TGG + chr8_1:51240444-51240463 Msa1199270:CDS 40.0%
GCAATTGTACAAGGCCTAAT+GGG + chr8_1:51240445-51240464 Msa1199270:CDS 40.0%
TACCAAGGAATCTTCCCATT+AGG - chr8_1:51240462-51240481 None:intergenic 40.0%
ACGAACTGTACACCATTAGA+TGG + chr8_1:51240539-51240558 Msa1199270:CDS 40.0%
AATATAGTCACTGTGGTTGG+AGG - chr8_1:51240580-51240599 None:intergenic 40.0%
AATAGCGGTGAACATGAATG+GGG + chr8_1:51240640-51240659 Msa1199270:CDS 40.0%
!! ATGAATGGGGAGCATTGATT+GGG + chr8_1:51240653-51240672 Msa1199270:CDS 40.0%
! CCCATTAGTCCTTTAAGGAA+AGG - chr8_1:51240718-51240737 None:intergenic 40.0%
GTCTTCCCATTAGTCCTTTA+AGG - chr8_1:51240723-51240742 None:intergenic 40.0%
! CACCAACTCTTGTTGTCATT+TGG + chr8_1:51240752-51240771 Msa1199270:CDS 40.0%
GACCAAATGACAACAAGAGT+TGG - chr8_1:51240757-51240776 None:intergenic 40.0%
!! TGTCATTTGGTCTGTGCTTT+TGG + chr8_1:51240765-51240784 Msa1199270:CDS 40.0%
GTCAATTCTTACCCAAACCA+AGG - chr8_1:51240803-51240822 None:intergenic 40.0%
!! GTTTGTTGTTTGACACGTGT+TGG + chr8_1:51240977-51240996 Msa1199270:three_prime_UTR 40.0%
!!! TCATTTTTTGGCTCCAAGTG+AGG + chr8_1:51241144-51241163 Msa1199270:three_prime_UTR 40.0%
TAAGTCATCACAACCTCACT+TGG - chr8_1:51241160-51241179 None:intergenic 40.0%
TGTATATCTGTGTGTGTCTG+TGG - chr8_1:51241232-51241251 None:intergenic 40.0%
TAAGGACTGAGTCTTCCTGA+AGG - chr8_1:51236759-51236778 None:intergenic 45.0%
CATCCAGTACCTGATGCAAT+TGG + chr8_1:51236840-51236859 Msa1199270:CDS 45.0%
AGTCCAATTGCATCAGGTAC+TGG - chr8_1:51236846-51236865 None:intergenic 45.0%
CGATCGATGGGAAACCATTT+GGG - chr8_1:51236930-51236949 None:intergenic 45.0%
GGATTTGAACTCGACTCCTA+AGG + chr8_1:51237248-51237267 Msa1199270:intron 45.0%
! AGCATTGAACTGATACCAGC+TGG + chr8_1:51237289-51237308 Msa1199270:intron 45.0%
AACAACCGCAGATCCAATCA+AGG + chr8_1:51237380-51237399 Msa1199270:CDS 45.0%
TGGTTCCTTGATTGGATCTG+CGG - chr8_1:51237388-51237407 None:intergenic 45.0%
ACAAGAGGTGGTTCCTTGAT+TGG - chr8_1:51237396-51237415 None:intergenic 45.0%
AAGTGCTTCAAAGGTGAGCA+TGG - chr8_1:51237502-51237521 None:intergenic 45.0%
AAATACTTCTCAGGTGCTCG+CGG - chr8_1:51237585-51237604 None:intergenic 45.0%
! CGGCGTTCTTTTACGTATGT+CGG - chr8_1:51237645-51237664 None:intergenic 45.0%
AAAAGAACGCCGTGCTATGA+AGG + chr8_1:51237653-51237672 Msa1199270:CDS 45.0%
TGGTACCAACCTTCATAGCA+CGG - chr8_1:51237665-51237684 None:intergenic 45.0%
GGTGAGAATAAATGCGCTTG+TGG + chr8_1:51237899-51237918 Msa1199270:CDS 45.0%
TCTATGAGAGTTCCACCAGA+AGG + chr8_1:51237927-51237946 Msa1199270:CDS 45.0%
TTCATACTCCAACCTTCTGG+TGG - chr8_1:51237942-51237961 None:intergenic 45.0%
AAAGATGAAACACCATGGCC+AGG + chr8_1:51237960-51237979 Msa1199270:CDS 45.0%
!! TTTGTGTTGTTTCCTGGCCA+TGG - chr8_1:51237975-51237994 None:intergenic 45.0%
CACAATGGAGGAGACAATGA+AGG + chr8_1:51238029-51238048 Msa1199270:CDS 45.0%
! TGCTCCTTTTGTGCTCAACT+TGG + chr8_1:51238254-51238273 Msa1199270:CDS 45.0%
! CAGTCCAAGTTGAGCACAAA+AGG - chr8_1:51238261-51238280 None:intergenic 45.0%
TGTTTGTGTCCGTGCTTCAT+AGG + chr8_1:51238563-51238582 Msa1199270:intron 45.0%
!! AGACACCTCAAGTTGATCTG+CGG - chr8_1:51238655-51238674 None:intergenic 45.0%
!! GAAGAGGATGGGAGCATTAT+AGG + chr8_1:51238808-51238827 Msa1199270:CDS 45.0%
CAATGGCTGCTTGTCTTCAT+CGG - chr8_1:51238923-51238942 None:intergenic 45.0%
CATGAATGGCCTCTTTAAGC+AGG - chr8_1:51239050-51239069 None:intergenic 45.0%
AGCTCATACCAACCTGTAGA+TGG - chr8_1:51239277-51239296 None:intergenic 45.0%
!! CTACAGGTTGGTATGAGCTA+TGG + chr8_1:51239278-51239297 Msa1199270:intron 45.0%
! TGCCGAAAAGAGCTCCTTTT+AGG + chr8_1:51239369-51239388 Msa1199270:CDS 45.0%
! GCCGAAAAGAGCTCCTTTTA+GGG + chr8_1:51239370-51239389 Msa1199270:CDS 45.0%
! CCCCTAAAAGGAGCTCTTTT+CGG - chr8_1:51239374-51239393 None:intergenic 45.0%
! CCGAAAAGAGCTCCTTTTAG+GGG + chr8_1:51239371-51239390 Msa1199270:CDS 45.0%
CATACCATATTGGACAGTGG+CGG - chr8_1:51239475-51239494 None:intergenic 45.0%
AGCCATACCATATTGGACAG+TGG - chr8_1:51239478-51239497 None:intergenic 45.0%
GCAGGGACCAAAGTCAAAAT+CGG - chr8_1:51239787-51239806 None:intergenic 45.0%
GTATGGACGTTGTGGTATCA+TGG + chr8_1:51239919-51239938 Msa1199270:intron 45.0%
TGGTATCATGGCATGATGCA+TGG + chr8_1:51239931-51239950 Msa1199270:intron 45.0%
ACTACTCATACGTACTTGCG+AGG + chr8_1:51239985-51240004 Msa1199270:intron 45.0%
TACGTACTTGCGAGGTTGTT+TGG + chr8_1:51239993-51240012 Msa1199270:intron 45.0%
! GGTAGGAACTTTTGCAAGTC+TGG + chr8_1:51240291-51240310 Msa1199270:intron 45.0%
!! ATGGAGTGGAGTTAGTCTTG+AGG + chr8_1:51240366-51240385 Msa1199270:CDS 45.0%
!! GTGGAGTTAGTCTTGAGGAA+TGG + chr8_1:51240371-51240390 Msa1199270:CDS 45.0%
!! GAGTTAGTCTTGAGGAATGG+TGG + chr8_1:51240374-51240393 Msa1199270:CDS 45.0%
TTAAACTCGCCATCATCGTC+TGG - chr8_1:51240520-51240539 None:intergenic 45.0%
!! CATGAATGGGGAGCATTGAT+TGG + chr8_1:51240652-51240671 Msa1199270:CDS 45.0%
GACTGTCTTTGTGTCTGTGT+TGG + chr8_1:51241038-51241057 Msa1199270:three_prime_UTR 45.0%
! TTGGTGCTTCATAGCATGCA+AGG + chr8_1:51241057-51241076 Msa1199270:three_prime_UTR 45.0%
TGGTGCTTCATAGCATGCAA+GGG + chr8_1:51241058-51241077 Msa1199270:three_prime_UTR 45.0%
GCGATCGATGGGAAACCATT+TGG - chr8_1:51236931-51236950 None:intergenic 50.0%
AGGTATGTCTCGCGATCGAT+GGG - chr8_1:51236942-51236961 None:intergenic 50.0%
AAGGTATGTCTCGCGATCGA+TGG - chr8_1:51236943-51236962 None:intergenic 50.0%
TTCAGGACCTGACTGAAAGG+CGG - chr8_1:51236968-51236987 None:intergenic 50.0%
AGCTTCAGGACCTGACTGAA+AGG - chr8_1:51236971-51236990 None:intergenic 50.0%
TGAGAGTTCCACCAGAAGGT+TGG + chr8_1:51237931-51237950 Msa1199270:CDS 50.0%
! TACCAAGGCGTTCATTGCAC+CGG - chr8_1:51238123-51238142 None:intergenic 50.0%
TTGTGTCCGTGCTTCATAGG+CGG + chr8_1:51238566-51238585 Msa1199270:intron 50.0%
TTAAGGCCGCCTATGAAGCA+CGG - chr8_1:51238575-51238594 None:intergenic 50.0%
CTATGAAGACCGGACACTCT+GGG + chr8_1:51239083-51239102 Msa1199270:CDS 50.0%
TATGAAGACCGGACACTCTG+GGG + chr8_1:51239084-51239103 Msa1199270:CDS 50.0%
GCATACTCGTGGTTGGAGAT+CGG + chr8_1:51239337-51239356 Msa1199270:CDS 50.0%
CTACCGCCCATCTAAGAACT+TGG - chr8_1:51239430-51239449 None:intergenic 50.0%
CAAGTTCTTAGATGGGCGGT+AGG + chr8_1:51239428-51239447 Msa1199270:CDS 50.0%
CGCCACTGTCCAATATGGTA+TGG + chr8_1:51239473-51239492 Msa1199270:CDS 50.0%
GAAGACTCAAGCTGCTCCAA+AGG + chr8_1:51239507-51239526 Msa1199270:CDS 50.0%
GGCCTAATGGGAAGATTCCT+TGG + chr8_1:51240457-51240476 Msa1199270:CDS 50.0%
GGGCCTGATGTTAAGCAATG+TGG + chr8_1:51240844-51240863 Msa1199270:CDS 50.0%
ACCTTGACCGCCTTTCAGTC+AGG + chr8_1:51236958-51236977 Msa1199270:CDS 55.0%
ACCTGACTGAAAGGCGGTCA+AGG - chr8_1:51236962-51236981 None:intergenic 55.0%
GAACGCCGTGCTATGAAGGT+TGG + chr8_1:51237657-51237676 Msa1199270:intron 55.0%
!! GAGCGTTTTGACGCCTTAGG+AGG - chr8_1:51238751-51238770 None:intergenic 55.0%
!!! CGAGAGCGTTTTGACGCCTT+AGG - chr8_1:51238754-51238773 None:intergenic 55.0%
GCTATGAAGACCGGACACTC+TGG + chr8_1:51239082-51239101 Msa1199270:CDS 55.0%
ATCGGGGCTGTTCCCCTAAA+AGG - chr8_1:51239386-51239405 None:intergenic 55.0%
TTGGACAGTGGCGGCTGAAT+AGG - chr8_1:51239466-51239485 None:intergenic 55.0%
TCAGCCGCCACTGTCCAATA+TGG + chr8_1:51239468-51239487 Msa1199270:CDS 55.0%
TCAGTGAGCAAGCAGACAGC+CGG - chr8_1:51239599-51239618 None:intergenic 55.0%
GAGTCACGTCACAGCACGTA+TGG + chr8_1:51239902-51239921 Msa1199270:intron 55.0%
CACAGCACGTATGGACGTTG+TGG + chr8_1:51239911-51239930 Msa1199270:intron 55.0%
!! TCGAAGGCACCAGACGATGA+TGG + chr8_1:51240508-51240527 Msa1199270:CDS 55.0%
ACTGAACCTAGCACCAGCCA+AGG + chr8_1:51241201-51241220 Msa1199270:three_prime_UTR 55.0%
CTGAACCTAGCACCAGCCAA+GGG + chr8_1:51241202-51241221 Msa1199270:three_prime_UTR 55.0%
GTGTGTCTGTGGTTCTCCCT+TGG - chr8_1:51241221-51241240 None:intergenic 55.0%
AGCCGGTGCAATGAACGCCT+TGG + chr8_1:51238118-51238137 Msa1199270:CDS 60.0%
! CCTCGTATCCCCAGAGTGTC+CGG - chr8_1:51239095-51239114 None:intergenic 60.0%
GTTCTCCCTTGGCTGGTGCT+AGG - chr8_1:51241210-51241229 None:intergenic 60.0%
GTCTGTGGTTCTCCCTTGGC+TGG - chr8_1:51241217-51241236 None:intergenic 60.0%
CTTCTCAGGTGCTCGCGGCT+CGG - chr8_1:51237580-51237599 None:intergenic 65.0%
! CCGGACACTCTGGGGATACG+AGG + chr8_1:51239092-51239111 Msa1199270:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 51236483 51241262 51236483 ID=Msa1199270;Name=Msa1199270
chr8_1 mRNA 51236483 51241262 51236483 ID=Msa1199270-mRNA-1;Parent=Msa1199270;Name=Msa1199270-mRNA-1;_AED=0.04;_eAED=0.04;_QI=300|1|1|1|1|1|8|383|776
chr8_1 exon 51236483 51236979 51236483 ID=Msa1199270-mRNA-1:exon:16182;Parent=Msa1199270-mRNA-1
chr8_1 exon 51237329 51237674 51237329 ID=Msa1199270-mRNA-1:exon:16183;Parent=Msa1199270-mRNA-1
chr8_1 exon 51237879 51238139 51237879 ID=Msa1199270-mRNA-1:exon:16184;Parent=Msa1199270-mRNA-1
chr8_1 exon 51238228 51238440 51238228 ID=Msa1199270-mRNA-1:exon:16185;Parent=Msa1199270-mRNA-1
chr8_1 exon 51238658 51238829 51238658 ID=Msa1199270-mRNA-1:exon:16186;Parent=Msa1199270-mRNA-1
chr8_1 exon 51238914 51239113 51238914 ID=Msa1199270-mRNA-1:exon:16187;Parent=Msa1199270-mRNA-1
chr8_1 exon 51239284 51239637 51239284 ID=Msa1199270-mRNA-1:exon:16188;Parent=Msa1199270-mRNA-1
chr8_1 exon 51240292 51241262 51240292 ID=Msa1199270-mRNA-1:exon:16189;Parent=Msa1199270-mRNA-1
chr8_1 five_prime_UTR 51236483 51236782 51236483 ID=Msa1199270-mRNA-1:five_prime_utr;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51236783 51236979 51236783 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51237329 51237674 51237329 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51237879 51238139 51237879 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51238228 51238440 51238228 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51238658 51238829 51238658 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51238914 51239113 51238914 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51239284 51239637 51239284 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 CDS 51240292 51240879 51240292 ID=Msa1199270-mRNA-1:cds;Parent=Msa1199270-mRNA-1
chr8_1 three_prime_UTR 51240880 51241262 51240880 ID=Msa1199270-mRNA-1:three_prime_utr;Parent=Msa1199270-mRNA-1
Gene Sequence

>Msa1199270

ATGATGGTTGTGGCAAGGCTCATCCTTCTATTACTCTTCTTTGAGTACAGAATCTCTCATCCAGTACCTGATGCAATTGGACTTTGGTTCATATCAGTATCATGTGAAATCTGGCTTGCATTGTCATGGATACTTGATCAGATTCCCAAATGGTTTCCCATCGATCGCGAGACATACCTTGACCGCCTTTCAGTCAGGTTTGAGCCAGAAAACAAGCCTAATATGCTTTCTCCAATAGATATCTTTATAACAACCGCAGATCCAATCAAGGAACCACCTCTTGTTACAGCAAATACTGTTCTTTCAATTTTGGCACTAGATTATCCTGCAAACAAAATTTCATGTTACGTTTCTGATGACGGCGCTTCCATGCTCACCTTTGAAGCACTTCAAGAAACAGCTGAATTTGCGCAAAAATGGGTACCTTTCTGTAAACAATTCTCTACCGAGCCGCGAGCACCTGAGAAGTATTTCTCTGAGAAGATAGACTTTCTTAAGGATAAGCTTCAACCGACATACGTAAAAGAACGCCGTGCTATGAAGAGAGAATATGAAGAGTTTAAGGTGAGAATAAATGCGCTTGTGGCTAAATCTATGAGAGTTCCACCAGAAGGTTGGAGTATGAAAGATGAAACACCATGGCCAGGAAACAACACAAAAGATCATCCAAGTATGATACAAATACTTCTTGGTCACAATGGAGGAGACAATGAAGGAAATGAACTTCCATCTCTTGTCTACATTTCTAGAGAGAAAAGACCAGCATTTCAACATCACACAAAAGCCGGTGCAATGAACGCCTTGCTTCGTGTATCGGCAGTATTGAGCAATGCTCCTTTTGTGCTCAACTTGGACTGCAATCATTATGTGAATTACAGCAAAGTTGTGAGAGAAGCCATGTGTTTCTTTATGGACATTCAACTTGGGAATAGTATTGCTTTTGTTCAGTTTCCACTGAGATTTGATAGTCTTGATAGGAACGATCGTTATGCCAACAAAAACACTATTTTATTTGATATCAACTTGAGGTGTCTAGATGGAATTCAAGGACCTGTTTATATTGGATCAGGTTGTATATTCAGAAGGAAAGCTTTAAATGGCTTTGATCCTCCTAAGGCGTCAAAACGCTCTCGAGTCGTACAAGTTCACTCAAAACAGGATGAAAATGAAGAGGATGGGAGCATTATAGAAGCAACCGATGAAGACAAGCAGCCATTGCAATTAGATAAGGATACTGAAAATAAATTTGGAAAGTCTACACTCTTCATGAATTCTTCATTGACAGAAGAAGGTGGTGTAGATCCTTCTTCAACTCAAGAAGTCCTGCTTAAAGAGGCCATTCATGTCATGAGTTGTAGCTATGAAGACCGGACACTCTGGGGATACGAGGTTGGTATGAGCTATGGATCTATAGCATCAGATATTCTAACAAGTTTAAAGATGCATACTCGTGGTTGGAGATCGGTATACTGCATGCCGAAAAGAGCTCCTTTTAGGGGAACAGCCCCGATAAATCTTACAGAAAGACTTAACCAAGTTCTTAGATGGGCGGTAGGATCACTTGAAATCCTATTCAGCCGCCACTGTCCAATATGGTATGGCTTTAAAGAAGGAAGACTCAAGCTGCTCCAAAGGATTGCCTATATTAACAGCACTGTCTACCCTTTTAGTGCATTACCTCTCATAATATATTGTATCGTTCCGGCTGTCTGCTTGCTCACTGATAAATTCATCACACCATCGGTAGGAACTTTTGCAAGTCTGGTATTCATTTCTCTATTCATCTCAATCTTCGCCTCTTCTATTCTTGAATTGAGATGGAGTGGAGTTAGTCTTGAGGAATGGTGGAGAAATCAACAATTTTGGGTCATTGGAAGTATATCAGCACATCTCTTTGCAATTGTACAAGGCCTAATGGGAAGATTCCTTGGTAGATTTAATGCACATTTCAACATTGTATCGAAGGCACCAGACGATGATGGCGAGTTTAACGAACTGTACACCATTAGATGGACAGTACTATTAATACCTCCAACCACAGTGACTATATTCAACATTATTGGTATTGTTGCTGGTTTCACAGATGCTATAAATAGCGGTGAACATGAATGGGGAGCATTGATTGGGAAATTGTTCTTTTCTTCATGGGTTATTGCTCATCTTTATCCTTTCCTTAAAGGACTAATGGGAAGACAGAATAGAACACCAACTCTTGTTGTCATTTGGTCTGTGCTTTTGGCTTCTATCTTTTCCTTGGTTTGGGTAAGAATTGACCCTTTTGTGTTGAAAACTAAGGGGCCTGATGTTAAGCAATGTGGAATTAGTTGTTGA
Protein sequence

>Msa1199270

MMVVARLILLLLFFEYRISHPVPDAIGLWFISVSCEIWLALSWILDQIPKWFPIDRETYLDRLSVRFEPENKPNMLSPIDIFITTADPIKEPPLVTANTVLSILALDYPANKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKQFSTEPRAPEKYFSEKIDFLKDKLQPTYVKERRAMKREYEEFKVRINALVAKSMRVPPEGWSMKDETPWPGNNTKDHPSMIQILLGHNGGDNEGNELPSLVYISREKRPAFQHHTKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNYSKVVREAMCFFMDIQLGNSIAFVQFPLRFDSLDRNDRYANKNTILFDINLRCLDGIQGPVYIGSGCIFRRKALNGFDPPKASKRSRVVQVHSKQDENEEDGSIIEATDEDKQPLQLDKDTENKFGKSTLFMNSSLTEEGGVDPSSTQEVLLKEAIHVMSCSYEDRTLWGYEVGMSYGSIASDILTSLKMHTRGWRSVYCMPKRAPFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKLLQRIAYINSTVYPFSALPLIIYCIVPAVCLLTDKFITPSVGTFASLVFISLFISIFASSILELRWSGVSLEEWWRNQQFWVIGSISAHLFAIVQGLMGRFLGRFNAHFNIVSKAPDDDGEFNELYTIRWTVLLIPPTTVTIFNIIGIVAGFTDAINSGEHEWGALIGKLFFSSWVIAHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC*