Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371910 | XP_003610667.1 | 94.527 | 201 | 11 | 0 | 1 | 201 | 1 | 201 | 2.73e-137 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371910 | sp|Q84MC0|UGPI4_ARATH | 58.791 | 182 | 72 | 2 | 20 | 201 | 20 | 198 | 5.29e-70 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371910 | B7FGN4 | 94.527 | 201 | 11 | 0 | 1 | 201 | 1 | 201 | 1.30e-137 | 392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1371910 | 0.803220 | 3.867068e-49 | -8.615850e-47 |
| Msa0002420 | Msa1371910 | 0.809247 | 2.079193e-50 | -8.615850e-47 |
| Msa0019900 | Msa1371910 | 0.823031 | 1.723791e-53 | -8.615850e-47 |
| Msa0027820 | Msa1371910 | 0.824476 | 7.906837e-54 | -8.615850e-47 |
| Msa0034210 | Msa1371910 | 0.833406 | 5.432824e-56 | -8.615850e-47 |
| Msa0040790 | Msa1371910 | 0.806292 | 8.830933e-50 | -8.615850e-47 |
| Msa0048510 | Msa1371910 | 0.813726 | 2.212336e-51 | -8.615850e-47 |
| Msa0052870 | Msa1371910 | 0.801567 | 8.471522e-49 | -8.615850e-47 |
| Msa0075300 | Msa1371910 | 0.809264 | 2.062196e-50 | -8.615850e-47 |
| Msa0077340 | Msa1371910 | 0.842977 | 1.859620e-58 | -8.615850e-47 |
| Msa0077560 | Msa1371910 | 0.818007 | 2.453316e-52 | -8.615850e-47 |
| Msa0081520 | Msa1371910 | 0.853399 | 2.452018e-61 | -8.615850e-47 |
| Msa0093850 | Msa1371910 | 0.814547 | 1.457405e-51 | -8.615850e-47 |
| Msa0094780 | Msa1371910 | 0.835297 | 1.821568e-56 | -8.615850e-47 |
| Msa0106320 | Msa1371910 | 0.813136 | 2.981259e-51 | -8.615850e-47 |
| Msa1348090 | Msa1371910 | 0.820485 | 6.691543e-53 | -8.615850e-47 |
| Msa1356830 | Msa1371910 | 0.838701 | 2.459827e-57 | -8.615850e-47 |
| Msa1359490 | Msa1371910 | 0.811962 | 5.383984e-51 | -8.615850e-47 |
| Msa1371520 | Msa1371910 | 0.806562 | 7.745122e-50 | -8.615850e-47 |
| Msa1371910 | Msa1375280 | 0.837238 | 5.849554e-57 | -8.615850e-47 |
| Msa1371910 | Msa1392580 | 0.811574 | 6.539098e-51 | -8.615850e-47 |
| Msa1371910 | Msa1403710 | 0.808292 | 3.326487e-50 | -8.615850e-47 |
| Msa1371910 | Msa1405460 | 0.841984 | 3.410115e-58 | -8.615850e-47 |
| Msa1371910 | Msa1412000 | 0.824571 | 7.512202e-54 | -8.615850e-47 |
| Msa1371910 | Msa1415540 | 0.835482 | 1.635622e-56 | -8.615850e-47 |
| Msa1371910 | Msa1427110 | 0.863937 | 1.742878e-64 | -8.615850e-47 |
| Msa1371910 | Msa1432500 | 0.818803 | 1.620077e-52 | -8.615850e-47 |
| Msa1371910 | Msa1437940 | 0.844012 | 9.838548e-59 | -8.615850e-47 |
| Msa1371910 | Msa1440960 | 0.887303 | 1.605719e-72 | -8.615850e-47 |
| Msa1371910 | Msa1452140 | 0.832396 | 9.680815e-56 | -8.615850e-47 |
| Msa1371910 | Msa1459460 | 0.805794 | 1.123729e-49 | -8.615850e-47 |
| Msa1371910 | Msa1460720 | 0.844727 | 6.320625e-59 | -8.615850e-47 |
| Msa1371910 | Msa1461370 | 0.803380 | 3.583936e-49 | -8.615850e-47 |
| Msa0611210 | Msa1371910 | 0.815727 | 7.970576e-52 | -8.615850e-47 |
| Msa0623900 | Msa1371910 | 0.854886 | 9.129508e-62 | -8.615850e-47 |
| Msa0623910 | Msa1371910 | 0.885981 | 5.085543e-72 | -8.615850e-47 |
| Msa0624900 | Msa1371910 | 0.832397 | 9.677750e-56 | -8.615850e-47 |
| Msa0626450 | Msa1371910 | 0.880714 | 4.372126e-70 | -8.615850e-47 |
| Msa0626490 | Msa1371910 | 0.880356 | 5.871203e-70 | -8.615850e-47 |
| Msa0644410 | Msa1371910 | 0.817539 | 3.129358e-52 | -8.615850e-47 |
| Msa0651550 | Msa1371910 | 0.825684 | 4.097645e-54 | -8.615850e-47 |
| Msa0652000 | Msa1371910 | 0.818061 | 2.385290e-52 | -8.615850e-47 |
| Msa0652770 | Msa1371910 | 0.827788 | 1.288893e-54 | -8.615850e-47 |
| Msa0658640 | Msa1371910 | 0.809957 | 1.463444e-50 | -8.615850e-47 |
| Msa0660370 | Msa1371910 | 0.840073 | 1.083155e-57 | -8.615850e-47 |
| Msa0664090 | Msa1371910 | 0.818857 | 1.574673e-52 | -8.615850e-47 |
| Msa0664600 | Msa1371910 | 0.879511 | 1.174447e-69 | -8.615850e-47 |
| Msa0674480 | Msa1371910 | 0.801086 | 1.062653e-48 | -8.615850e-47 |
| Msa0681260 | Msa1371910 | 0.845135 | 4.904332e-59 | -8.615850e-47 |
| Msa0681280 | Msa1371910 | 0.844535 | 7.119064e-59 | -8.615850e-47 |
| Msa0683490 | Msa1371910 | 0.834010 | 3.836357e-56 | -8.615850e-47 |
| Msa0694500 | Msa1371910 | 0.808860 | 2.516608e-50 | -8.615850e-47 |
| Msa0695270 | Msa1371910 | 0.812607 | 3.894302e-51 | -8.615850e-47 |
| Msa0702720 | Msa1371910 | 0.804311 | 2.296245e-49 | -8.615850e-47 |
| Msa0709440 | Msa1371910 | 0.804488 | 2.108978e-49 | -8.615850e-47 |
| Msa0711400 | Msa1371910 | 0.947672 | 4.259826e-106 | -8.615850e-47 |
| Msa0716890 | Msa1371910 | 0.827065 | 1.921905e-54 | -8.615850e-47 |
| Msa0738700 | Msa1371910 | 0.812367 | 4.393075e-51 | -8.615850e-47 |
| Msa0751870 | Msa1371910 | 0.883515 | 4.201938e-71 | -8.615850e-47 |
| Msa0758030 | Msa1371910 | 0.840884 | 6.646064e-58 | -8.615850e-47 |
| Msa0783530 | Msa1371910 | 0.824034 | 1.004422e-53 | -8.615850e-47 |
| Msa0795750 | Msa1371910 | 0.808469 | 3.050544e-50 | -8.615850e-47 |
| Msa0795870 | Msa1371910 | 0.844674 | 6.531226e-59 | -8.615850e-47 |
| Msa0819170 | Msa1371910 | 0.812643 | 3.823645e-51 | -8.615850e-47 |
| Msa0821780 | Msa1371910 | 0.801366 | 9.315678e-49 | -8.615850e-47 |
| Msa0828970 | Msa1371910 | 0.801016 | 1.098583e-48 | -8.615850e-47 |
| Msa0833530 | Msa1371910 | 0.831111 | 2.008812e-55 | -8.615850e-47 |
| Msa0833650 | Msa1371910 | 0.833030 | 6.737110e-56 | -8.615850e-47 |
| Msa0123340 | Msa1371910 | 0.822496 | 2.296221e-53 | -8.615850e-47 |
| Msa0125360 | Msa1371910 | 0.820934 | 5.276151e-53 | -8.615850e-47 |
| Msa0128310 | Msa1371910 | 0.839622 | 1.418945e-57 | -8.615850e-47 |
| Msa0136650 | Msa1371910 | 0.865100 | 7.544791e-65 | -8.615850e-47 |
| Msa0140280 | Msa1371910 | 0.801908 | 7.211659e-49 | -8.615850e-47 |
| Msa0158860 | Msa1371910 | 0.827469 | 1.538244e-54 | -8.615850e-47 |
| Msa0173890 | Msa1371910 | 0.825429 | 4.709261e-54 | -8.615850e-47 |
| Msa0174440 | Msa1371910 | 0.828596 | 8.234904e-55 | -8.615850e-47 |
| Msa0174450 | Msa1371910 | 0.876923 | 9.488844e-69 | -8.615850e-47 |
| Msa0189900 | Msa1371910 | 0.807933 | 3.968392e-50 | -8.615850e-47 |
| Msa0221000 | Msa1371910 | 0.813916 | 2.008872e-51 | -8.615850e-47 |
| Msa0222560 | Msa1371910 | 0.830756 | 2.455126e-55 | -8.615850e-47 |
| Msa0225860 | Msa1371910 | 0.808101 | 3.653586e-50 | -8.615850e-47 |
| Msa1226520 | Msa1371910 | 0.804427 | 2.171310e-49 | -8.615850e-47 |
| Msa1256850 | Msa1371910 | 0.824020 | 1.012165e-53 | -8.615850e-47 |
| Msa1257440 | Msa1371910 | 0.814116 | 1.814562e-51 | -8.615850e-47 |
| Msa1279150 | Msa1371910 | 0.816281 | 5.995728e-52 | -8.615850e-47 |
| Msa1297970 | Msa1371910 | 0.858477 | 8.022213e-63 | -8.615850e-47 |
| Msa1305250 | Msa1371910 | 0.805954 | 1.040338e-49 | -8.615850e-47 |
| Msa1306640 | Msa1371910 | 0.834344 | 3.164551e-56 | -8.615850e-47 |
| Msa1307630 | Msa1371910 | 0.819215 | 1.305749e-52 | -8.615850e-47 |
| Msa1315130 | Msa1371910 | 0.802399 | 5.715426e-49 | -8.615850e-47 |
| Msa1316330 | Msa1371910 | 0.818074 | 2.369611e-52 | -8.615850e-47 |
| Msa1320670 | Msa1371910 | 0.803047 | 4.200778e-49 | -8.615850e-47 |
| Msa1341840 | Msa1371910 | 0.812384 | 4.356525e-51 | -8.615850e-47 |
| Msa0369790 | Msa1371910 | 0.861522 | 9.672736e-64 | -8.615850e-47 |
| Msa0375640 | Msa1371910 | 0.844975 | 5.417253e-59 | -8.615850e-47 |
| Msa0378720 | Msa1371910 | 0.834253 | 3.335584e-56 | -8.615850e-47 |
| Msa0380620 | Msa1371910 | 0.852790 | 3.664318e-61 | -8.615850e-47 |
| Msa0390970 | Msa1371910 | 0.822463 | 2.336809e-53 | -8.615850e-47 |
| Msa0392380 | Msa1371910 | 0.803590 | 3.242321e-49 | -8.615850e-47 |
| Msa0424160 | Msa1371910 | 0.851479 | 8.640547e-61 | -8.615850e-47 |
| Msa0428370 | Msa1371910 | 0.830633 | 2.631893e-55 | -8.615850e-47 |
| Msa0430260 | Msa1371910 | 0.870874 | 1.049355e-66 | -8.615850e-47 |
| Msa0435420 | Msa1371910 | 0.805949 | 1.042560e-49 | -8.615850e-47 |
| Msa0435570 | Msa1371910 | 0.818402 | 1.997692e-52 | -8.615850e-47 |
| Msa0453040 | Msa1371910 | 0.821438 | 4.038390e-53 | -8.615850e-47 |
| Msa0464000 | Msa1371910 | 0.860831 | 1.569962e-63 | -8.615850e-47 |
| Msa0465530 | Msa1371910 | 0.807379 | 5.202975e-50 | -8.615850e-47 |
| Msa0472950 | Msa1371910 | 0.823033 | 1.721731e-53 | -8.615850e-47 |
| Msa0474730 | Msa1371910 | 0.849784 | 2.589107e-60 | -8.615850e-47 |
| Msa0481890 | Msa1371910 | 0.804072 | 2.574246e-49 | -8.615850e-47 |
| Msa0981320 | Msa1371910 | 0.838501 | 2.770236e-57 | -8.615850e-47 |
| Msa0982650 | Msa1371910 | 0.824035 | 1.003673e-53 | -8.615850e-47 |
| Msa1020480 | Msa1371910 | 0.811816 | 5.793804e-51 | -8.615850e-47 |
| Msa1028280 | Msa1371910 | 0.800247 | 1.576223e-48 | -8.615850e-47 |
| Msa1042160 | Msa1371910 | 0.816132 | 6.472984e-52 | -8.615850e-47 |
| Msa1042190 | Msa1371910 | 0.822160 | 2.748685e-53 | -8.615850e-47 |
| Msa1072940 | Msa1371910 | 0.854602 | 1.103594e-61 | -8.615850e-47 |
| Msa1081390 | Msa1371910 | 0.801386 | 9.225639e-49 | -8.615850e-47 |
| Msa1084530 | Msa1371910 | 0.800599 | 1.336044e-48 | -8.615850e-47 |
| Msa1085330 | Msa1371910 | 0.813235 | 2.836301e-51 | -8.615850e-47 |
| Msa0249540 | Msa1371910 | 0.807081 | 6.016647e-50 | -8.615850e-47 |
| Msa0281470 | Msa1371910 | 0.814953 | 1.185027e-51 | -8.615850e-47 |
| Msa0298470 | Msa1371910 | 0.817064 | 4.001635e-52 | -8.615850e-47 |
| Msa0298500 | Msa1371910 | 0.838874 | 2.218321e-57 | -8.615850e-47 |
| Msa0301820 | Msa1371910 | 0.808873 | 2.500338e-50 | -8.615850e-47 |
| Msa0307270 | Msa1371910 | 0.863453 | 2.462151e-64 | -8.615850e-47 |
| Msa0307570 | Msa1371910 | 0.801457 | 8.924848e-49 | -8.615850e-47 |
| Msa0320500 | Msa1371910 | 0.808894 | 2.474356e-50 | -8.615850e-47 |
| Msa0330520 | Msa1371910 | 0.815143 | 1.075267e-51 | -8.615850e-47 |
| Msa0337700 | Msa1371910 | 0.802815 | 4.690135e-49 | -8.615850e-47 |
| Msa0340500 | Msa1371910 | 0.801667 | 8.083240e-49 | -8.615850e-47 |
| Msa1111380 | Msa1371910 | 0.819199 | 1.316197e-52 | -8.615850e-47 |
| Msa1113340 | Msa1371910 | 0.812960 | 3.258868e-51 | -8.615850e-47 |
| Msa1116220 | Msa1371910 | 0.801296 | 9.628826e-49 | -8.615850e-47 |
| Msa1123210 | Msa1371910 | 0.837450 | 5.159688e-57 | -8.615850e-47 |
| Msa1124950 | Msa1371910 | 0.810646 | 1.039455e-50 | -8.615850e-47 |
| Msa1125820 | Msa1371910 | 0.803259 | 3.797377e-49 | -8.615850e-47 |
| Msa1125990 | Msa1371910 | 0.805505 | 1.292217e-49 | -8.615850e-47 |
| Msa1130950 | Msa1371910 | 0.801272 | 9.739039e-49 | -8.615850e-47 |
| Msa1132840 | Msa1371910 | 0.828199 | 1.026390e-54 | -8.615850e-47 |
| Msa1160910 | Msa1371910 | 0.810840 | 9.434481e-51 | -8.615850e-47 |
| Msa1160920 | Msa1371910 | 0.853976 | 1.673086e-61 | -8.615850e-47 |
| Msa1167470 | Msa1371910 | 0.811195 | 7.904988e-51 | -8.615850e-47 |
| Msa1171290 | Msa1371910 | 0.808204 | 3.473482e-50 | -8.615850e-47 |
| Msa1174840 | Msa1371910 | 0.824587 | 7.445807e-54 | -8.615850e-47 |
| Msa1186020 | Msa1371910 | 0.803899 | 2.797186e-49 | -8.615850e-47 |
| Msa1192570 | Msa1371910 | 0.806446 | 8.192716e-50 | -8.615850e-47 |
| Msa1204310 | Msa1371910 | 0.805054 | 1.606122e-49 | -8.615850e-47 |
| Msa1206230 | Msa1371910 | 0.870163 | 1.796156e-66 | -8.615850e-47 |
| Msa1207190 | Msa1371910 | 0.800488 | 1.407681e-48 | -8.615850e-47 |
| Msa1208950 | Msa1371910 | 0.829169 | 5.982852e-55 | -8.615850e-47 |
| Msa1215870 | Msa1371910 | 0.814787 | 1.289231e-51 | -8.615850e-47 |
| Msa0483100 | Msa1371910 | 0.808862 | 2.513813e-50 | -8.615850e-47 |
| Msa0500380 | Msa1371910 | 0.862812 | 3.887690e-64 | -8.615850e-47 |
| Msa0509550 | Msa1371910 | 0.863372 | 2.608744e-64 | -8.615850e-47 |
| Msa0515800 | Msa1371910 | 0.840275 | 9.591322e-58 | -8.615850e-47 |
| Msa0519760 | Msa1371910 | 0.864380 | 1.267851e-64 | -8.615850e-47 |
| Msa0519810 | Msa1371910 | 0.860426 | 2.083218e-63 | -8.615850e-47 |
| Msa0519840 | Msa1371910 | 0.867017 | 1.865135e-65 | -8.615850e-47 |
| Msa0528570 | Msa1371910 | 0.839075 | 1.968682e-57 | -8.615850e-47 |
| Msa0529030 | Msa1371910 | 0.842689 | 2.217993e-58 | -8.615850e-47 |
| Msa0534720 | Msa1371910 | 0.803149 | 4.000165e-49 | -8.615850e-47 |
| Msa0546110 | Msa1371910 | 0.801483 | 8.814164e-49 | -8.615850e-47 |
| Msa0548470 | Msa1371910 | 0.811692 | 6.164717e-51 | -8.615850e-47 |
| Msa0567170 | Msa1371910 | 0.810337 | 1.212132e-50 | -8.615850e-47 |
| Msa0571290 | Msa1371910 | 0.820833 | 5.565305e-53 | -8.615850e-47 |
| Msa0573380 | Msa1371910 | 0.829653 | 4.564641e-55 | -8.615850e-47 |
| Msa0575920 | Msa1371910 | 0.801139 | 1.036818e-48 | -8.615850e-47 |
| Msa0580370 | Msa1371910 | 0.828166 | 1.045540e-54 | -8.615850e-47 |
| Msa0582480 | Msa1371910 | 0.814497 | 1.495076e-51 | -8.615850e-47 |
| Msa0586220 | Msa1371910 | 0.818999 | 1.462093e-52 | -8.615850e-47 |
| Msa0597270 | Msa1371910 | 0.808197 | 3.485390e-50 | -8.615850e-47 |
| Msa0851850 | Msa1371910 | 0.810659 | 1.032821e-50 | -8.615850e-47 |
| Msa0859290 | Msa1371910 | 0.809871 | 1.527498e-50 | -8.615850e-47 |
| Msa0860620 | Msa1371910 | 0.816245 | 6.106727e-52 | -8.615850e-47 |
| Msa0876310 | Msa1371910 | 0.813205 | 2.880272e-51 | -8.615850e-47 |
| Msa0878280 | Msa1371910 | 0.807403 | 5.141254e-50 | -8.615850e-47 |
| Msa0880270 | Msa1371910 | 0.842170 | 3.045596e-58 | -8.615850e-47 |
| Msa0945190 | Msa1371910 | 0.831069 | 2.057316e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371910 | MtrunA17_Chr5g0394151 | 94.527 | 201 | 11 | 0 | 1 | 201 | 1 | 201 | 2.51e-141 | 392 |
| Msa1371910 | MtrunA17_Chr1g0205951 | 65.366 | 205 | 61 | 3 | 1 | 201 | 1 | 199 | 1.67e-94 | 273 |
| Msa1371910 | MtrunA17_Chr7g0272941 | 40.000 | 160 | 92 | 3 | 14 | 170 | 16 | 174 | 1.15e-35 | 124 |
| Msa1371910 | MtrunA17_Chr1g0191761 | 40.645 | 155 | 90 | 2 | 12 | 164 | 23 | 177 | 3.64e-35 | 123 |
| Msa1371910 | MtrunA17_Chr1g0191781 | 33.702 | 181 | 118 | 2 | 3 | 181 | 6 | 186 | 8.87e-32 | 114 |
| Msa1371910 | MtrunA17_Chr1g0191771 | 36.296 | 135 | 85 | 1 | 27 | 160 | 46 | 180 | 2.26e-27 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371910 | AT3G06035.1 | 58.791 | 182 | 72 | 2 | 20 | 201 | 20 | 198 | 5.38e-71 | 214 |
| Msa1371910 | AT5G19250.1 | 65.972 | 144 | 49 | 0 | 27 | 170 | 28 | 171 | 1.48e-66 | 203 |
| Msa1371910 | AT1G54860.1 | 41.237 | 194 | 109 | 4 | 5 | 193 | 6 | 199 | 6.42e-51 | 163 |
| Msa1371910 | AT5G19240.1 | 46.784 | 171 | 77 | 4 | 27 | 194 | 28 | 187 | 7.08e-43 | 143 |
| Msa1371910 | AT5G19230.2 | 48.485 | 165 | 75 | 3 | 1 | 164 | 1 | 156 | 7.22e-42 | 140 |
| Msa1371910 | AT5G19230.1 | 48.485 | 165 | 75 | 3 | 1 | 164 | 1 | 156 | 7.22e-42 | 140 |
Find 65 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACTAAACTAAACTTATT+TGG | 0.140192 | tig0019267:+388 | Msa1371910:five_prime_UTR |
| GAAAGCTTTATCACCAAAAT+TGG | 0.148873 | tig0019267:+1845 | Msa1371910:CDS |
| GACTCAAAGTTTACTGGAAT+TGG | 0.202771 | tig0019267:+1719 | Msa1371910:CDS |
| GTAATGCCTGCTTGTGTTCC+TGG | 0.222223 | tig0019267:+1635 | Msa1371910:CDS |
| GGATTGGTTCCGAAGATAAT+TGG | 0.229248 | tig0019267:+1741 | Msa1371910:CDS |
| CTTAATGACTCAAAGTTTAC+TGG | 0.244932 | tig0019267:+1713 | Msa1371910:CDS |
| TTAAGTGACATTTAGTTAAA+AGG | 0.252789 | tig0019267:-1586 | None:intergenic |
| GCAGTAAACCAATCCAATTT+TGG | 0.309912 | tig0019267:-1858 | None:intergenic |
| TGAGGAAGATGATCTTTATC+AGG | 0.311325 | tig0019267:+1394 | Msa1371910:CDS |
| TACTATCACTGTCTGGGAAA+TGG | 0.319924 | tig0019267:+1997 | Msa1371910:three_prime_UTR |
| AGTTTAGTTTAGTTTAGTTT+AGG | 0.330278 | tig0019267:-381 | None:intergenic |
| ACAATAAATTGTTCTATTGA+TGG | 0.334563 | tig0019267:+2238 | Msa1371910:three_prime_UTR |
| TTCCTTCTATTCTTCTTCTC+TGG | 0.339502 | tig0019267:-2115 | None:intergenic |
| TTGTGTTCCTGGCCTTGTTC+CGG | 0.361906 | tig0019267:+1646 | Msa1371910:CDS |
| CAGTGAAGCATAGAGGGATA+TGG | 0.369607 | tig0019267:+2051 | Msa1371910:three_prime_UTR |
| AGTTAAAAGGTCTTCATAGT+TGG | 0.372121 | tig0019267:-1573 | None:intergenic |
| GAAGAAGATACTTGATTTGA+AGG | 0.375473 | tig0019267:-452 | None:intergenic |
| AGTGATAGTATAAGCCTATA+TGG | 0.384109 | tig0019267:-1984 | None:intergenic |
| TGCCAGAGAAGAAGAATAGA+AGG | 0.388717 | tig0019267:+2113 | Msa1371910:three_prime_UTR |
| ACTATCACTGTCTGGGAAAT+GGG | 0.388974 | tig0019267:+1998 | Msa1371910:three_prime_UTR |
| ACTCAAAGTTTACTGGAATT+GGG | 0.389579 | tig0019267:+1720 | Msa1371910:CDS |
| TACAAGGTTGATTCTTGAAC+TGG | 0.391876 | tig0019267:-1502 | None:intergenic |
| AGGCTTATACTATCACTGTC+TGG | 0.401288 | tig0019267:+1990 | Msa1371910:three_prime_UTR |
| GTTAAAAGGTCTTCATAGTT+GGG | 0.403819 | tig0019267:-1572 | None:intergenic |
| CACGTGCACCGACAGTGTTT+TGG | 0.406240 | tig0019267:-350 | None:intergenic |
| TGCTCATTGCTCTTGTTAGT+TGG | 0.425769 | tig0019267:+1878 | Msa1371910:CDS |
| AGCATCCTCACGCTCAAAAC+AGG | 0.435655 | tig0019267:-1910 | None:intergenic |
| CTTTATCACCAAAATTGGAT+TGG | 0.444400 | tig0019267:+1850 | Msa1371910:CDS |
| TCAAACTTTGAAGTAACAAA+TGG | 0.445254 | tig0019267:+473 | Msa1371910:exon |
| AACAACAATCCAATTATCTT+CGG | 0.461927 | tig0019267:-1750 | None:intergenic |
| AGTTTAGTTTAGTTTAGGAC+AGG | 0.462035 | tig0019267:-376 | None:intergenic |
| CTCGTCATCACTAGAACTCT+CGG | 0.472274 | tig0019267:-1810 | None:intergenic |
| AGTGATGACGAGACTTCTAA+TGG | 0.482206 | tig0019267:+1821 | Msa1371910:CDS |
| AAGTTTACTGGAATTGGGAT+TGG | 0.486609 | tig0019267:+1725 | Msa1371910:CDS |
| ACAATGTCCGGAACAAGGCC+AGG | 0.505794 | tig0019267:-1653 | None:intergenic |
| TCTTCATAGTTGGGTAATTG+AGG | 0.505804 | tig0019267:-1563 | None:intergenic |
| TACAGATCCATCCCTTGTGT+TGG | 0.505945 | tig0019267:-1615 | None:intergenic |
| TTGCAGCATAGTCGGTAAGC+AGG | 0.507546 | tig0019267:+1953 | Msa1371910:three_prime_UTR |
| GCACCTGTGGTATTTGTACA+AGG | 0.509795 | tig0019267:-1518 | None:intergenic |
| AATATTTCCAACACAAGGGA+TGG | 0.513314 | tig0019267:+1608 | Msa1371910:CDS |
| TTCTCGACACATCTTATGCA+TGG | 0.516308 | tig0019267:+257 | Msa1371910:five_prime_UTR |
| ACAAGGCCAGGAACACAAGC+AGG | 0.520245 | tig0019267:-1641 | None:intergenic |
| GGCTTATACTATCACTGTCT+GGG | 0.523682 | tig0019267:+1991 | Msa1371910:three_prime_UTR |
| TATAAGCCTATATGGTAGCT+TGG | 0.531909 | tig0019267:-1976 | None:intergenic |
| GAAGATACTTGATTTGAAGG+TGG | 0.540708 | tig0019267:-449 | None:intergenic |
| AAATTAGAGAGGACAATGTC+CGG | 0.542734 | tig0019267:-1665 | None:intergenic |
| GGTAATTGAGGCTCAGTACC+TGG | 0.547704 | tig0019267:-1551 | None:intergenic |
| AGCAGGCCAAGCTACCATAT+AGG | 0.557003 | tig0019267:+1970 | Msa1371910:three_prime_UTR |
| TGAGTGACTGAATAAGAGAA+TGG | 0.560522 | tig0019267:-532 | None:intergenic |
| ATCATCAAATAATTAAGCAA+TGG | 0.567763 | tig0019267:-2296 | None:intergenic |
| ACTTAAATATTTCCAACACA+AGG | 0.568858 | tig0019267:+1603 | Msa1371910:CDS |
| TGGTATTGTGTTAGCACCTG+TGG | 0.587893 | tig0019267:-1531 | None:intergenic |
| TGGGAAACTGCAAATAGTGA+TGG | 0.590466 | tig0019267:+2017 | Msa1371910:three_prime_UTR |
| AAACTTATTTGGAACTTCTG+CGG | 0.591539 | tig0019267:+399 | Msa1371910:five_prime_UTR |
| TCGTCATCACTAGAACTCTC+GGG | 0.593940 | tig0019267:-1809 | None:intergenic |
| GAGGAAGATGATCTTTATCA+GGG | 0.594123 | tig0019267:+1395 | Msa1371910:CDS |
| GAGATTTCGTGAAATTAGAG+AGG | 0.595369 | tig0019267:-1676 | None:intergenic |
| CACTCAGTTCATTGTGACCA+TGG | 0.595566 | tig0019267:+549 | Msa1371910:CDS |
| CAACCTTGTACAAATACCAC+AGG | 0.614385 | tig0019267:+1515 | Msa1371910:CDS |
| AGAGGACAATGTCCGGAACA+AGG | 0.617052 | tig0019267:-1658 | None:intergenic |
| ACAGGTGCTAACACAATACC+AGG | 0.623473 | tig0019267:+1533 | Msa1371910:CDS |
| CTTAAATATTTCCAACACAA+GGG | 0.640170 | tig0019267:+1604 | Msa1371910:CDS |
| TTGACTACAAGCACTTCTGA+CGG | 0.642247 | tig0019267:+1776 | Msa1371910:CDS |
| AAACACAGCCAAAACACTGT+CGG | 0.653969 | tig0019267:+342 | Msa1371910:five_prime_UTR |
| ATGTCAAGTTCAATGATGTG+CGG | 0.702075 | tig0019267:-1430 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACTAAACTAAACTTATT+TGG | + | tig0019267:388-407 | Msa1371910:five_prime_UTR | 15.0% |
| !!! | CTTGTATTTTAATTTCAAAA+TGG | + | tig0019267:2268-2287 | Msa1371910:three_prime_UTR | 15.0% |
| !! | TAAACTAAACTAAACTTATT+TGG | + | tig0019267:388-407 | Msa1371910:five_prime_UTR | 15.0% |
| !!! | CTTGTATTTTAATTTCAAAA+TGG | + | tig0019267:2268-2287 | Msa1371910:three_prime_UTR | 15.0% |
| !!! | TATTTTTGGTTTTGTTTTGA+TGG | - | tig0019267:314-333 | None:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | - | tig0019267:384-403 | None:intergenic | 20.0% |
| !! | ATATGATAACCAAAATATCT+AGG | + | tig0019267:697-716 | Msa1371910:intron | 20.0% |
| !!! | TAAAGACTTTTACTATAAGT+TGG | + | tig0019267:874-893 | Msa1371910:intron | 20.0% |
| !!! | AAAGACTTTTACTATAAGTT+GGG | + | tig0019267:875-894 | Msa1371910:intron | 20.0% |
| !! | TTAAGTGACATTTAGTTAAA+AGG | - | tig0019267:1589-1608 | None:intergenic | 20.0% |
| !!! | TAATTTTGCTTCAATATTGT+CGG | + | tig0019267:2079-2098 | Msa1371910:three_prime_UTR | 20.0% |
| !!! | AAAAAGCTGTTTTTTTATGT+AGG | + | tig0019267:2138-2157 | Msa1371910:three_prime_UTR | 20.0% |
| !!! | AAAAGCTGTTTTTTTATGTA+GGG | + | tig0019267:2139-2158 | Msa1371910:three_prime_UTR | 20.0% |
| !! | ACAATAAATTGTTCTATTGA+TGG | + | tig0019267:2238-2257 | Msa1371910:three_prime_UTR | 20.0% |
| !!! | TATTTTTGGTTTTGTTTTGA+TGG | - | tig0019267:314-333 | None:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | - | tig0019267:384-403 | None:intergenic | 20.0% |
| !! | ATATGATAACCAAAATATCT+AGG | + | tig0019267:697-716 | Msa1371910:intron | 20.0% |
| !!! | TAAAGACTTTTACTATAAGT+TGG | + | tig0019267:874-893 | Msa1371910:intron | 20.0% |
| !!! | AAAGACTTTTACTATAAGTT+GGG | + | tig0019267:875-894 | Msa1371910:intron | 20.0% |
| !! | TTAAGTGACATTTAGTTAAA+AGG | - | tig0019267:1589-1608 | None:intergenic | 20.0% |
| !!! | TAATTTTGCTTCAATATTGT+CGG | + | tig0019267:2079-2098 | Msa1371910:three_prime_UTR | 20.0% |
| !!! | AAAAAGCTGTTTTTTTATGT+AGG | + | tig0019267:2138-2157 | Msa1371910:three_prime_UTR | 20.0% |
| !!! | AAAAGCTGTTTTTTTATGTA+GGG | + | tig0019267:2139-2158 | Msa1371910:three_prime_UTR | 20.0% |
| !! | ACAATAAATTGTTCTATTGA+TGG | + | tig0019267:2238-2257 | Msa1371910:three_prime_UTR | 20.0% |
| !!! | TTTCTTCTTCGATTTTGTTT+TGG | + | tig0019267:212-231 | Msa1371910:five_prime_UTR | 25.0% |
| !! | GTGTTTCAGGATATTATTTT+TGG | - | tig0019267:328-347 | None:intergenic | 25.0% |
| !!! | TCAAACTTTGAAGTAACAAA+TGG | + | tig0019267:473-492 | Msa1371910:exon | 25.0% |
| ! | AATAGAAAGAATAGTTACCA+TGG | - | tig0019267:569-588 | None:intergenic | 25.0% |
| ! | TTTAAATGCATTATCCACAA+TGG | - | tig0019267:858-877 | None:intergenic | 25.0% |
| ! | ACTTAAATATTTCCAACACA+AGG | + | tig0019267:1603-1622 | Msa1371910:CDS | 25.0% |
| ! | CTTAAATATTTCCAACACAA+GGG | + | tig0019267:1604-1623 | Msa1371910:CDS | 25.0% |
| ! | AACAACAATCCAATTATCTT+CGG | - | tig0019267:1753-1772 | None:intergenic | 25.0% |
| !!! | TTTCTTCTTCGATTTTGTTT+TGG | + | tig0019267:212-231 | Msa1371910:five_prime_UTR | 25.0% |
| !! | GTGTTTCAGGATATTATTTT+TGG | - | tig0019267:328-347 | None:intergenic | 25.0% |
| !!! | TCAAACTTTGAAGTAACAAA+TGG | + | tig0019267:473-492 | Msa1371910:exon | 25.0% |
| ! | AATAGAAAGAATAGTTACCA+TGG | - | tig0019267:569-588 | None:intergenic | 25.0% |
| ! | TTTAAATGCATTATCCACAA+TGG | - | tig0019267:858-877 | None:intergenic | 25.0% |
| ! | ACTTAAATATTTCCAACACA+AGG | + | tig0019267:1603-1622 | Msa1371910:CDS | 25.0% |
| ! | CTTAAATATTTCCAACACAA+GGG | + | tig0019267:1604-1623 | Msa1371910:CDS | 25.0% |
| ! | AACAACAATCCAATTATCTT+CGG | - | tig0019267:1753-1772 | None:intergenic | 25.0% |
| ! | AGTTTAGTTTAGTTTAGGAC+AGG | - | tig0019267:379-398 | None:intergenic | 30.0% |
| ! | AAACTTATTTGGAACTTCTG+CGG | + | tig0019267:399-418 | Msa1371910:five_prime_UTR | 30.0% |
| ! | GAAGAAGATACTTGATTTGA+AGG | - | tig0019267:455-474 | None:intergenic | 30.0% |
| TCATCATGCTATAGTTAGAT+AGG | + | tig0019267:831-850 | Msa1371910:intron | 30.0% | |
| CTGTATTGAATCAACAAAAC+AGG | - | tig0019267:905-924 | None:intergenic | 30.0% | |
| ! | TAAGTTTTCTTTAGTTACCC+AGG | - | tig0019267:1092-1111 | None:intergenic | 30.0% |
| GTAAGTGTTTATGCTATAAG+CGG | + | tig0019267:1172-1191 | Msa1371910:intron | 30.0% | |
| GTTAAAAGGTCTTCATAGTT+GGG | - | tig0019267:1575-1594 | None:intergenic | 30.0% | |
| AGTTAAAAGGTCTTCATAGT+TGG | - | tig0019267:1576-1595 | None:intergenic | 30.0% | |
| CTTAATGACTCAAAGTTTAC+TGG | + | tig0019267:1713-1732 | Msa1371910:CDS | 30.0% | |
| ACTCAAAGTTTACTGGAATT+GGG | + | tig0019267:1720-1739 | Msa1371910:CDS | 30.0% | |
| ! | GAAAGCTTTATCACCAAAAT+TGG | + | tig0019267:1845-1864 | Msa1371910:CDS | 30.0% |
| CTTTATCACCAAAATTGGAT+TGG | + | tig0019267:1850-1869 | Msa1371910:CDS | 30.0% | |
| ! | CATTTTTATTGCAGCATAGT+CGG | + | tig0019267:1945-1964 | Msa1371910:three_prime_UTR | 30.0% |
| AGTGATAGTATAAGCCTATA+TGG | - | tig0019267:1987-2006 | None:intergenic | 30.0% | |
| ! | AGTTTAGTTTAGTTTAGGAC+AGG | - | tig0019267:379-398 | None:intergenic | 30.0% |
| ! | AAACTTATTTGGAACTTCTG+CGG | + | tig0019267:399-418 | Msa1371910:five_prime_UTR | 30.0% |
| ! | GAAGAAGATACTTGATTTGA+AGG | - | tig0019267:455-474 | None:intergenic | 30.0% |
| TCATCATGCTATAGTTAGAT+AGG | + | tig0019267:831-850 | Msa1371910:intron | 30.0% | |
| CTGTATTGAATCAACAAAAC+AGG | - | tig0019267:905-924 | None:intergenic | 30.0% | |
| ! | TAAGTTTTCTTTAGTTACCC+AGG | - | tig0019267:1092-1111 | None:intergenic | 30.0% |
| GTAAGTGTTTATGCTATAAG+CGG | + | tig0019267:1172-1191 | Msa1371910:intron | 30.0% | |
| GTTAAAAGGTCTTCATAGTT+GGG | - | tig0019267:1575-1594 | None:intergenic | 30.0% | |
| AGTTAAAAGGTCTTCATAGT+TGG | - | tig0019267:1576-1595 | None:intergenic | 30.0% | |
| CTTAATGACTCAAAGTTTAC+TGG | + | tig0019267:1713-1732 | Msa1371910:CDS | 30.0% | |
| ACTCAAAGTTTACTGGAATT+GGG | + | tig0019267:1720-1739 | Msa1371910:CDS | 30.0% | |
| ! | GAAAGCTTTATCACCAAAAT+TGG | + | tig0019267:1845-1864 | Msa1371910:CDS | 30.0% |
| CTTTATCACCAAAATTGGAT+TGG | + | tig0019267:1850-1869 | Msa1371910:CDS | 30.0% | |
| ! | CATTTTTATTGCAGCATAGT+CGG | + | tig0019267:1945-1964 | Msa1371910:three_prime_UTR | 30.0% |
| AGTGATAGTATAAGCCTATA+TGG | - | tig0019267:1987-2006 | None:intergenic | 30.0% | |
| !!! | GGTTTTGTTTTGATGGTAGT+AGG | - | tig0019267:307-326 | None:intergenic | 35.0% |
| ! | GAAGATACTTGATTTGAAGG+TGG | - | tig0019267:452-471 | None:intergenic | 35.0% |
| TGAGTGACTGAATAAGAGAA+TGG | - | tig0019267:535-554 | None:intergenic | 35.0% | |
| !! | AGATCTAGCTAGTTCTACAT+TGG | - | tig0019267:644-663 | None:intergenic | 35.0% |
| TAGAACTAGCTAGATCTGAT+AGG | + | tig0019267:647-666 | Msa1371910:intron | 35.0% | |
| AGAACTAGCTAGATCTGATA+GGG | + | tig0019267:648-667 | Msa1371910:intron | 35.0% | |
| ! | TCACTCAAGCCTAGATATTT+TGG | - | tig0019267:709-728 | None:intergenic | 35.0% |
| ATAGTTAGATAGGTCCATTG+TGG | + | tig0019267:841-860 | Msa1371910:intron | 35.0% | |
| ! | CTGTAGATACAAAGCTTGTT+TGG | + | tig0019267:949-968 | Msa1371910:intron | 35.0% |
| ACACACTTACGAGATTGTTT+AGG | + | tig0019267:1002-1021 | Msa1371910:intron | 35.0% | |
| TTATTCCCATAAGCTTTCCT+GGG | + | tig0019267:1072-1091 | Msa1371910:intron | 35.0% | |
| TTGAGTGAATCTATCTCTCT+TGG | + | tig0019267:1267-1286 | Msa1371910:intron | 35.0% | |
| TGAGGAAGATGATCTTTATC+AGG | + | tig0019267:1394-1413 | Msa1371910:CDS | 35.0% | |
| GAGGAAGATGATCTTTATCA+GGG | + | tig0019267:1395-1414 | Msa1371910:CDS | 35.0% | |
| ATGTCAAGTTCAATGATGTG+CGG | - | tig0019267:1433-1452 | None:intergenic | 35.0% | |
| ! | TACAAGGTTGATTCTTGAAC+TGG | - | tig0019267:1505-1524 | None:intergenic | 35.0% |
| TCTTCATAGTTGGGTAATTG+AGG | - | tig0019267:1566-1585 | None:intergenic | 35.0% | |
| AATATTTCCAACACAAGGGA+TGG | + | tig0019267:1608-1627 | Msa1371910:CDS | 35.0% | |
| AAATTAGAGAGGACAATGTC+CGG | - | tig0019267:1668-1687 | None:intergenic | 35.0% | |
| GAGATTTCGTGAAATTAGAG+AGG | - | tig0019267:1679-1698 | None:intergenic | 35.0% | |
| GACTCAAAGTTTACTGGAAT+TGG | + | tig0019267:1719-1738 | Msa1371910:CDS | 35.0% | |
| AAGTTTACTGGAATTGGGAT+TGG | + | tig0019267:1725-1744 | Msa1371910:CDS | 35.0% | |
| ! | GCAGTAAACCAATCCAATTT+TGG | - | tig0019267:1861-1880 | None:intergenic | 35.0% |
| TATAAGCCTATATGGTAGCT+TGG | - | tig0019267:1979-1998 | None:intergenic | 35.0% | |
| !! | TGTTTTTCAGTGAAGCATAG+AGG | + | tig0019267:2044-2063 | Msa1371910:three_prime_UTR | 35.0% |
| !! | GTTTTTCAGTGAAGCATAGA+GGG | + | tig0019267:2045-2064 | Msa1371910:three_prime_UTR | 35.0% |
| TTCCTTCTATTCTTCTTCTC+TGG | - | tig0019267:2118-2137 | None:intergenic | 35.0% | |
| !!! | GGTTTTGTTTTGATGGTAGT+AGG | - | tig0019267:307-326 | None:intergenic | 35.0% |
| ! | GAAGATACTTGATTTGAAGG+TGG | - | tig0019267:452-471 | None:intergenic | 35.0% |
| TGAGTGACTGAATAAGAGAA+TGG | - | tig0019267:535-554 | None:intergenic | 35.0% | |
| !! | AGATCTAGCTAGTTCTACAT+TGG | - | tig0019267:644-663 | None:intergenic | 35.0% |
| TAGAACTAGCTAGATCTGAT+AGG | + | tig0019267:647-666 | Msa1371910:intron | 35.0% | |
| AGAACTAGCTAGATCTGATA+GGG | + | tig0019267:648-667 | Msa1371910:intron | 35.0% | |
| ! | TCACTCAAGCCTAGATATTT+TGG | - | tig0019267:709-728 | None:intergenic | 35.0% |
| ATAGTTAGATAGGTCCATTG+TGG | + | tig0019267:841-860 | Msa1371910:intron | 35.0% | |
| ! | CTGTAGATACAAAGCTTGTT+TGG | + | tig0019267:949-968 | Msa1371910:intron | 35.0% |
| ACACACTTACGAGATTGTTT+AGG | + | tig0019267:1002-1021 | Msa1371910:intron | 35.0% | |
| TTATTCCCATAAGCTTTCCT+GGG | + | tig0019267:1072-1091 | Msa1371910:intron | 35.0% | |
| TTGAGTGAATCTATCTCTCT+TGG | + | tig0019267:1267-1286 | Msa1371910:intron | 35.0% | |
| TGAGGAAGATGATCTTTATC+AGG | + | tig0019267:1394-1413 | Msa1371910:CDS | 35.0% | |
| GAGGAAGATGATCTTTATCA+GGG | + | tig0019267:1395-1414 | Msa1371910:CDS | 35.0% | |
| ATGTCAAGTTCAATGATGTG+CGG | - | tig0019267:1433-1452 | None:intergenic | 35.0% | |
| ! | TACAAGGTTGATTCTTGAAC+TGG | - | tig0019267:1505-1524 | None:intergenic | 35.0% |
| TCTTCATAGTTGGGTAATTG+AGG | - | tig0019267:1566-1585 | None:intergenic | 35.0% | |
| AATATTTCCAACACAAGGGA+TGG | + | tig0019267:1608-1627 | Msa1371910:CDS | 35.0% | |
| AAATTAGAGAGGACAATGTC+CGG | - | tig0019267:1668-1687 | None:intergenic | 35.0% | |
| GAGATTTCGTGAAATTAGAG+AGG | - | tig0019267:1679-1698 | None:intergenic | 35.0% | |
| GACTCAAAGTTTACTGGAAT+TGG | + | tig0019267:1719-1738 | Msa1371910:CDS | 35.0% | |
| AAGTTTACTGGAATTGGGAT+TGG | + | tig0019267:1725-1744 | Msa1371910:CDS | 35.0% | |
| ! | GCAGTAAACCAATCCAATTT+TGG | - | tig0019267:1861-1880 | None:intergenic | 35.0% |
| TATAAGCCTATATGGTAGCT+TGG | - | tig0019267:1979-1998 | None:intergenic | 35.0% | |
| !! | TGTTTTTCAGTGAAGCATAG+AGG | + | tig0019267:2044-2063 | Msa1371910:three_prime_UTR | 35.0% |
| !! | GTTTTTCAGTGAAGCATAGA+GGG | + | tig0019267:2045-2064 | Msa1371910:three_prime_UTR | 35.0% |
| TTCCTTCTATTCTTCTTCTC+TGG | - | tig0019267:2118-2137 | None:intergenic | 35.0% | |
| ATGTGTCGAGAAAAACATCG+AGG | - | tig0019267:249-268 | None:intergenic | 40.0% | |
| TTCTCGACACATCTTATGCA+TGG | + | tig0019267:257-276 | Msa1371910:five_prime_UTR | 40.0% | |
| AAACACAGCCAAAACACTGT+CGG | + | tig0019267:342-361 | Msa1371910:five_prime_UTR | 40.0% | |
| GAACTAGCTAGATCTGATAG+GGG | + | tig0019267:649-668 | Msa1371910:intron | 40.0% | |
| CTTATTCCCATAAGCTTTCC+TGG | + | tig0019267:1071-1090 | Msa1371910:intron | 40.0% | |
| AGTTACCCAGGAAAGCTTAT+GGG | - | tig0019267:1080-1099 | None:intergenic | 40.0% | |
| TAGTTACCCAGGAAAGCTTA+TGG | - | tig0019267:1081-1100 | None:intergenic | 40.0% | |
| AGTGAATCTATCTCTCTTGG+TGG | + | tig0019267:1270-1289 | Msa1371910:intron | 40.0% | |
| CAACCTTGTACAAATACCAC+AGG | + | tig0019267:1515-1534 | Msa1371910:CDS | 40.0% | |
| !! | GGATTGGTTCCGAAGATAAT+TGG | + | tig0019267:1741-1760 | Msa1371910:CDS | 40.0% |
| TTGACTACAAGCACTTCTGA+CGG | + | tig0019267:1776-1795 | Msa1371910:CDS | 40.0% | |
| ! | AGTGATGACGAGACTTCTAA+TGG | + | tig0019267:1821-1840 | Msa1371910:CDS | 40.0% |
| TGCTCATTGCTCTTGTTAGT+TGG | + | tig0019267:1878-1897 | Msa1371910:CDS | 40.0% | |
| !! | ATTATCCTGTTTTGAGCGTG+AGG | + | tig0019267:1905-1924 | Msa1371910:exon | 40.0% |
| AGGCTTATACTATCACTGTC+TGG | + | tig0019267:1990-2009 | Msa1371910:three_prime_UTR | 40.0% | |
| GGCTTATACTATCACTGTCT+GGG | + | tig0019267:1991-2010 | Msa1371910:three_prime_UTR | 40.0% | |
| TACTATCACTGTCTGGGAAA+TGG | + | tig0019267:1997-2016 | Msa1371910:three_prime_UTR | 40.0% | |
| ACTATCACTGTCTGGGAAAT+GGG | + | tig0019267:1998-2017 | Msa1371910:three_prime_UTR | 40.0% | |
| TGGGAAACTGCAAATAGTGA+TGG | + | tig0019267:2017-2036 | Msa1371910:three_prime_UTR | 40.0% | |
| TGCCAGAGAAGAAGAATAGA+AGG | + | tig0019267:2113-2132 | Msa1371910:three_prime_UTR | 40.0% | |
| ATGTGTCGAGAAAAACATCG+AGG | - | tig0019267:249-268 | None:intergenic | 40.0% | |
| TTCTCGACACATCTTATGCA+TGG | + | tig0019267:257-276 | Msa1371910:five_prime_UTR | 40.0% | |
| AAACACAGCCAAAACACTGT+CGG | + | tig0019267:342-361 | Msa1371910:five_prime_UTR | 40.0% | |
| GAACTAGCTAGATCTGATAG+GGG | + | tig0019267:649-668 | Msa1371910:intron | 40.0% | |
| CTTATTCCCATAAGCTTTCC+TGG | + | tig0019267:1071-1090 | Msa1371910:intron | 40.0% | |
| AGTTACCCAGGAAAGCTTAT+GGG | - | tig0019267:1080-1099 | None:intergenic | 40.0% | |
| TAGTTACCCAGGAAAGCTTA+TGG | - | tig0019267:1081-1100 | None:intergenic | 40.0% | |
| AGTGAATCTATCTCTCTTGG+TGG | + | tig0019267:1270-1289 | Msa1371910:intron | 40.0% | |
| CAACCTTGTACAAATACCAC+AGG | + | tig0019267:1515-1534 | Msa1371910:CDS | 40.0% | |
| !! | GGATTGGTTCCGAAGATAAT+TGG | + | tig0019267:1741-1760 | Msa1371910:CDS | 40.0% |
| TTGACTACAAGCACTTCTGA+CGG | + | tig0019267:1776-1795 | Msa1371910:CDS | 40.0% | |
| ! | AGTGATGACGAGACTTCTAA+TGG | + | tig0019267:1821-1840 | Msa1371910:CDS | 40.0% |
| TGCTCATTGCTCTTGTTAGT+TGG | + | tig0019267:1878-1897 | Msa1371910:CDS | 40.0% | |
| !! | ATTATCCTGTTTTGAGCGTG+AGG | + | tig0019267:1905-1924 | Msa1371910:exon | 40.0% |
| AGGCTTATACTATCACTGTC+TGG | + | tig0019267:1990-2009 | Msa1371910:three_prime_UTR | 40.0% | |
| GGCTTATACTATCACTGTCT+GGG | + | tig0019267:1991-2010 | Msa1371910:three_prime_UTR | 40.0% | |
| TACTATCACTGTCTGGGAAA+TGG | + | tig0019267:1997-2016 | Msa1371910:three_prime_UTR | 40.0% | |
| ACTATCACTGTCTGGGAAAT+GGG | + | tig0019267:1998-2017 | Msa1371910:three_prime_UTR | 40.0% | |
| TGGGAAACTGCAAATAGTGA+TGG | + | tig0019267:2017-2036 | Msa1371910:three_prime_UTR | 40.0% | |
| TGCCAGAGAAGAAGAATAGA+AGG | + | tig0019267:2113-2132 | Msa1371910:three_prime_UTR | 40.0% | |
| !!! | CAGTGTTTTGGCTGTGTTTC+AGG | - | tig0019267:341-360 | None:intergenic | 45.0% |
| CACTCAGTTCATTGTGACCA+TGG | + | tig0019267:549-568 | Msa1371910:CDS | 45.0% | |
| ! | ATCTATCTCTCTTGGTGGAC+TGG | + | tig0019267:1275-1294 | Msa1371910:intron | 45.0% |
| GGGGATGTTAAGGTAAGTAC+AGG | - | tig0019267:1367-1386 | None:intergenic | 45.0% | |
| ATCATCTTCCTCATCTGCAG+GGG | - | tig0019267:1387-1406 | None:intergenic | 45.0% | |
| GATCATCTTCCTCATCTGCA+GGG | - | tig0019267:1388-1407 | None:intergenic | 45.0% | |
| AGATCATCTTCCTCATCTGC+AGG | - | tig0019267:1389-1408 | None:intergenic | 45.0% | |
| GCACCTGTGGTATTTGTACA+AGG | - | tig0019267:1521-1540 | None:intergenic | 45.0% | |
| TGGTATTGTGTTAGCACCTG+TGG | - | tig0019267:1534-1553 | None:intergenic | 45.0% | |
| ACAGGTGCTAACACAATACC+AGG | + | tig0019267:1533-1552 | Msa1371910:CDS | 45.0% | |
| TACAGATCCATCCCTTGTGT+TGG | - | tig0019267:1618-1637 | None:intergenic | 45.0% | |
| TCGTCATCACTAGAACTCTC+GGG | - | tig0019267:1812-1831 | None:intergenic | 45.0% | |
| CTCGTCATCACTAGAACTCT+CGG | - | tig0019267:1813-1832 | None:intergenic | 45.0% | |
| CAGTGAAGCATAGAGGGATA+TGG | + | tig0019267:2051-2070 | Msa1371910:three_prime_UTR | 45.0% | |
| !!! | CAGTGTTTTGGCTGTGTTTC+AGG | - | tig0019267:341-360 | None:intergenic | 45.0% |
| CACTCAGTTCATTGTGACCA+TGG | + | tig0019267:549-568 | Msa1371910:CDS | 45.0% | |
| ! | ATCTATCTCTCTTGGTGGAC+TGG | + | tig0019267:1275-1294 | Msa1371910:intron | 45.0% |
| GGGGATGTTAAGGTAAGTAC+AGG | - | tig0019267:1367-1386 | None:intergenic | 45.0% | |
| ATCATCTTCCTCATCTGCAG+GGG | - | tig0019267:1387-1406 | None:intergenic | 45.0% | |
| GATCATCTTCCTCATCTGCA+GGG | - | tig0019267:1388-1407 | None:intergenic | 45.0% | |
| AGATCATCTTCCTCATCTGC+AGG | - | tig0019267:1389-1408 | None:intergenic | 45.0% | |
| GCACCTGTGGTATTTGTACA+AGG | - | tig0019267:1521-1540 | None:intergenic | 45.0% | |
| TGGTATTGTGTTAGCACCTG+TGG | - | tig0019267:1534-1553 | None:intergenic | 45.0% | |
| ACAGGTGCTAACACAATACC+AGG | + | tig0019267:1533-1552 | Msa1371910:CDS | 45.0% | |
| TACAGATCCATCCCTTGTGT+TGG | - | tig0019267:1618-1637 | None:intergenic | 45.0% | |
| TCGTCATCACTAGAACTCTC+GGG | - | tig0019267:1812-1831 | None:intergenic | 45.0% | |
| CTCGTCATCACTAGAACTCT+CGG | - | tig0019267:1813-1832 | None:intergenic | 45.0% | |
| CAGTGAAGCATAGAGGGATA+TGG | + | tig0019267:2051-2070 | Msa1371910:three_prime_UTR | 45.0% | |
| GGACTGGATCAAGCACAAGT+TGG | + | tig0019267:1291-1310 | Msa1371910:intron | 50.0% | |
| TCATCTGCAGGGGGATGTTA+AGG | - | tig0019267:1377-1396 | None:intergenic | 50.0% | |
| TTAACATCCCCCTGCAGATG+AGG | + | tig0019267:1376-1395 | Msa1371910:intron | 50.0% | |
| TCATCTTCCTCATCTGCAGG+GGG | - | tig0019267:1386-1405 | None:intergenic | 50.0% | |
| GGTAATTGAGGCTCAGTACC+TGG | - | tig0019267:1554-1573 | None:intergenic | 50.0% | |
| GTAATGCCTGCTTGTGTTCC+TGG | + | tig0019267:1635-1654 | Msa1371910:CDS | 50.0% | |
| !! | TTGTGTTCCTGGCCTTGTTC+CGG | + | tig0019267:1646-1665 | Msa1371910:CDS | 50.0% |
| AGAGGACAATGTCCGGAACA+AGG | - | tig0019267:1661-1680 | None:intergenic | 50.0% | |
| AGCATCCTCACGCTCAAAAC+AGG | - | tig0019267:1913-1932 | None:intergenic | 50.0% | |
| TTGCAGCATAGTCGGTAAGC+AGG | + | tig0019267:1953-1972 | Msa1371910:three_prime_UTR | 50.0% | |
| AGCAGGCCAAGCTACCATAT+AGG | + | tig0019267:1970-1989 | Msa1371910:three_prime_UTR | 50.0% | |
| GGACTGGATCAAGCACAAGT+TGG | + | tig0019267:1291-1310 | Msa1371910:intron | 50.0% | |
| TCATCTGCAGGGGGATGTTA+AGG | - | tig0019267:1377-1396 | None:intergenic | 50.0% | |
| TTAACATCCCCCTGCAGATG+AGG | + | tig0019267:1376-1395 | Msa1371910:intron | 50.0% | |
| TCATCTTCCTCATCTGCAGG+GGG | - | tig0019267:1386-1405 | None:intergenic | 50.0% | |
| GGTAATTGAGGCTCAGTACC+TGG | - | tig0019267:1554-1573 | None:intergenic | 50.0% | |
| GTAATGCCTGCTTGTGTTCC+TGG | + | tig0019267:1635-1654 | Msa1371910:CDS | 50.0% | |
| !! | TTGTGTTCCTGGCCTTGTTC+CGG | + | tig0019267:1646-1665 | Msa1371910:CDS | 50.0% |
| AGAGGACAATGTCCGGAACA+AGG | - | tig0019267:1661-1680 | None:intergenic | 50.0% | |
| AGCATCCTCACGCTCAAAAC+AGG | - | tig0019267:1913-1932 | None:intergenic | 50.0% | |
| TTGCAGCATAGTCGGTAAGC+AGG | + | tig0019267:1953-1972 | Msa1371910:three_prime_UTR | 50.0% | |
| AGCAGGCCAAGCTACCATAT+AGG | + | tig0019267:1970-1989 | Msa1371910:three_prime_UTR | 50.0% | |
| !! | CACGTGCACCGACAGTGTTT+TGG | - | tig0019267:353-372 | None:intergenic | 55.0% |
| ACAAGGCCAGGAACACAAGC+AGG | - | tig0019267:1644-1663 | None:intergenic | 55.0% | |
| ACAATGTCCGGAACAAGGCC+AGG | - | tig0019267:1656-1675 | None:intergenic | 55.0% | |
| !! | CACGTGCACCGACAGTGTTT+TGG | - | tig0019267:353-372 | None:intergenic | 55.0% |
| ACAAGGCCAGGAACACAAGC+AGG | - | tig0019267:1644-1663 | None:intergenic | 55.0% | |
| ACAATGTCCGGAACAAGGCC+AGG | - | tig0019267:1656-1675 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019267 | gene | 193 | 2304 | 193 | ID=Msa1371910;Name=Msa1371910 |
| tig0019267 | mRNA | 193 | 2304 | 193 | ID=Msa1371910-mRNA-1;Parent=Msa1371910;Name=Msa1371910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=299|1|1|1|0|0.5|2|385|201 |
| tig0019267 | exon | 193 | 570 | 193 | ID=Msa1371910-mRNA-1:exon:2510;Parent=Msa1371910-mRNA-1 |
| tig0019267 | exon | 1393 | 2304 | 1393 | ID=Msa1371910-mRNA-1:exon:2511;Parent=Msa1371910-mRNA-1 |
| tig0019267 | five_prime_UTR | 193 | 491 | 193 | ID=Msa1371910-mRNA-1:five_prime_utr;Parent=Msa1371910-mRNA-1 |
| tig0019267 | CDS | 492 | 570 | 492 | ID=Msa1371910-mRNA-1:cds;Parent=Msa1371910-mRNA-1 |
| tig0019267 | CDS | 1393 | 1919 | 1393 | ID=Msa1371910-mRNA-1:cds;Parent=Msa1371910-mRNA-1 |
| tig0019267 | three_prime_UTR | 1920 | 2304 | 1920 | ID=Msa1371910-mRNA-1:three_prime_utr;Parent=Msa1371910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
