AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1254720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254720 MtrunA17_Chr8g0372071 98.810 252 2 1 1 251 1 252 0.0 509
Msa1254720 MtrunA17_Chr3g0116541 42.208 154 84 2 39 188 17 169 1.73e-33 120
Msa1254720 MtrunA17_Chr3g0098811 41.333 150 83 2 50 195 36 184 2.08e-28 107
Msa1254720 MtrunA17_Chr5g0444081 42.000 150 82 2 50 195 99 247 1.57e-26 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254720 AT2G18030.1 65.098 255 84 2 1 251 1 254 6.01e-122 347
Msa1254720 AT2G18030.2 62.105 190 67 2 1 186 1 189 4.25e-81 242
Msa1254720 AT5G61640.1 38.235 170 100 2 33 198 19 187 5.71e-30 111
Msa1254720 AT5G61640.2 38.235 170 100 2 33 198 46 214 1.02e-29 111
Msa1254720 AT5G07460.1 38.922 167 93 3 33 191 31 196 3.98e-28 107
Msa1254720 AT4G25130.1 42.466 146 79 2 50 191 92 236 2.26e-27 106
Msa1254720 AT5G07470.1 37.647 170 95 3 33 195 19 184 3.02e-26 102

Find 96 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCGCTCTCGGAAGTTTC+TGG 0.121780 8_2:-52847672 Msa1254720:CDS
GGAACTGTAATTGGCCTTTA+AGG 0.126974 8_2:-52844325 Msa1254720:exon
CATGTGCCTAATTCTCTTTC+TGG 0.127453 8_2:+52844199 None:intergenic
ACATTCCTTCTTCAGCTAAT+TGG 0.146256 8_2:-52844492 Msa1254720:CDS
GGGAACTACTTGATATATTT+TGG 0.185058 8_2:-52846237 Msa1254720:CDS
TTTCTCTGAAAGTTTCATTT+TGG 0.236101 8_2:+52847834 None:intergenic
ACATGAGCAACTTCCCTTAA+AGG 0.236206 8_2:+52844311 None:intergenic
GATCCACGGTTAATTAGTTT+TGG 0.241655 8_2:-52846259 Msa1254720:CDS
ATCACCAAAGCTTCGATATT+CGG 0.255220 8_2:+52847570 None:intergenic
TCTTTGCATCAATTTGCTTT+TGG 0.259160 8_2:+52844385 None:intergenic
AAGCTTCGATATTCGGGATT+AGG 0.290129 8_2:+52847577 None:intergenic
ACCTGGTGCTCAGGCTCTGC+CGG 0.306819 8_2:+52845926 None:intergenic
CATTCCTTCTTCAGCTAATT+GGG 0.328415 8_2:-52844491 Msa1254720:CDS
CAAACACCTGCCTGGGATCA+TGG 0.346817 8_2:+52846209 None:intergenic
TCACCAAAGCTTCGATATTC+GGG 0.364093 8_2:+52847571 None:intergenic
AACGTAATTAGTTGGCAATC+TGG 0.367430 8_2:+52844008 None:intergenic
TGGAGATCCGAAGCTGTGTT+CGG 0.368348 8_2:-52847652 Msa1254720:CDS
GAACTGTAATTGGCCTTTAA+GGG 0.373726 8_2:-52844324 Msa1254720:exon
TGATCACGCTGAATCGGTTC+AGG 0.380894 8_2:-52847551 Msa1254720:intron
CCATATGATGACTACATTTG+AGG 0.384582 8_2:-52844042 Msa1254720:three_prime_UTR
GATCTCTCGAGCTCCTCTTC+AGG 0.389871 8_2:+52844462 None:intergenic
GCCTTGGCCAAACACCTGCC+TGG 0.393908 8_2:+52846201 None:intergenic
CACAATGCTGCTTCTTGACC+TGG 0.394204 8_2:+52845982 None:intergenic
GCGGGTTGAGCGACCCGATC+CGG 0.408200 8_2:+52847733 None:intergenic
GTTTGCAAGCGTTGTTGATC+GGG 0.410660 8_2:+52847700 None:intergenic
TGCAAACTGTATCCGATTCC+CGG 0.410898 8_2:-52847752 Msa1254720:CDS
GAAATACCAGAAAGAGAATT+AGG 0.412914 8_2:-52844205 Msa1254720:three_prime_UTR
GGAGAGAATGTAGTTATAGT+TGG 0.413124 8_2:+52847810 None:intergenic
GGAGATCCGAAGCTGTGTTC+GGG 0.416814 8_2:-52847651 Msa1254720:CDS
AATTACAGTTCCCTTAAAAT+CGG 0.417059 8_2:+52844336 None:intergenic
CGGAGTAGTATAATCATATT+CGG 0.419147 8_2:+52844163 None:intergenic
CCCGGCAGAGCCTGAGCACC+AGG 0.421997 8_2:-52845927 Msa1254720:intron
GGTTTGCAAGCGTTGTTGAT+CGG 0.428416 8_2:+52847699 None:intergenic
CTGTACTGATTACCCACATC+AGG 0.433767 8_2:+52846178 None:intergenic
CATGTATGAACGTAATTAGT+TGG 0.437421 8_2:+52844000 None:intergenic
GGCTTCTGTCAGCAAAGAAC+AGG 0.442027 8_2:-52846011 Msa1254720:CDS
GAAAGTCAAACCTGGTGCTC+AGG 0.442914 8_2:+52845917 None:intergenic
CCCAGGCAGGTGTTTGGCCA+AGG 0.443504 8_2:-52846202 Msa1254720:CDS
CCTCAAATGTAGTCATCATA+TGG 0.451540 8_2:+52844042 None:intergenic
CTTTGGTGATCACGCTGAAT+CGG 0.455070 8_2:-52847557 Msa1254720:CDS
CTGTATCCGATTCCCGGATC+GGG 0.464851 8_2:-52847746 Msa1254720:CDS
AATCCCGAATATCGAAGCTT+TGG 0.468145 8_2:-52847574 Msa1254720:CDS
TGATCGGGTTGTTCGCGGGC+GGG 0.472390 8_2:+52847715 None:intergenic
TTCTTCTTCGCAGGGTGAGT+GGG 0.481972 8_2:+52844107 None:intergenic
CCTTGGCCAAACACCTGCCT+GGG 0.485328 8_2:+52846202 None:intergenic
GATTGTTGAATGTGGTAGAT+TGG 0.489841 8_2:+52847921 None:intergenic
GTTGTTGATCGGGTTGTTCG+CGG 0.492191 8_2:+52847710 None:intergenic
GCTGTGTTCGGGTGTTTACC+TGG 0.492300 8_2:-52847640 Msa1254720:CDS
CGGGTTGAGCGACCCGATCC+GGG 0.494310 8_2:+52847734 None:intergenic
ACGTAATTAGTTGGCAATCT+GGG 0.497617 8_2:+52844009 None:intergenic
AACCTGGCAACAAAATTGAA+TGG 0.501762 8_2:-52844438 Msa1254720:CDS
TTGTTGATCGGGTTGTTCGC+GGG 0.502766 8_2:+52847711 None:intergenic
TACAGTTTGCATTGTTGATG+AGG 0.511637 8_2:+52847764 None:intergenic
CCTGGTGCTCAGGCTCTGCC+GGG 0.514034 8_2:+52845927 None:intergenic
GGGATTAGGTTTAGATCCAC+CGG 0.526012 8_2:+52847591 None:intergenic
TTTGGTCAAGCCATGATCCC+AGG 0.532861 8_2:-52846219 Msa1254720:CDS
GCAAAGAACAGGAGCAAACC+AGG 0.534889 8_2:-52846000 Msa1254720:CDS
TGGAACTGAAGAATCAAGAA+TGG 0.536435 8_2:-52846032 Msa1254720:CDS
TTGATCGGGTTGTTCGCGGG+CGG 0.540227 8_2:+52847714 None:intergenic
TTTCTTCTTCGCAGGGTGAG+TGG 0.543079 8_2:+52844106 None:intergenic
TAAACACCCGAACACAGCTT+CGG 0.544459 8_2:+52847645 None:intergenic
ACTACTCAAATTCTACAACT+TGG 0.544557 8_2:-52845959 Msa1254720:CDS
TCTCGAGCTCCTCTTCAGGC+AGG 0.547751 8_2:+52844466 None:intergenic
ATGTTCATATTGTCATTCTG+TGG 0.551834 8_2:-52844292 Msa1254720:three_prime_UTR
GATTACCCACATCAGGGCCT+TGG 0.551890 8_2:+52846185 None:intergenic
CTGATGTGGGTAATCAGTAC+AGG 0.553146 8_2:-52846177 Msa1254720:intron
ACCGTGGTCCTCACAACACC+AGG 0.559602 8_2:+52847622 None:intergenic
GGTTCCCAATTAGCTGAAGA+AGG 0.559608 8_2:+52844487 None:intergenic
GGAGCTCGAGAGATCAAACC+TGG 0.562118 8_2:-52844454 Msa1254720:CDS
GTCAAGCCATGATCCCAGGC+AGG 0.571161 8_2:-52846215 Msa1254720:CDS
GTTTGGCCAAGGCCCTGATG+TGG 0.577488 8_2:-52846191 Msa1254720:CDS
TAAAAGCGGAAACTGAGGAG+TGG 0.583768 8_2:+52847887 None:intergenic
AATTGGGAACCTGCCTGAAG+AGG 0.585218 8_2:-52844475 Msa1254720:CDS
TTTGGCCAAGGCCCTGATGT+GGG 0.588131 8_2:-52846190 Msa1254720:CDS
AAAAGCGGAAACTGAGGAGT+GGG 0.589482 8_2:+52847888 None:intergenic
CAAACCGCGGTATTCGCTCT+CGG 0.597580 8_2:-52847682 Msa1254720:CDS
ATCGTGCTCAGTGTATCTAT+AGG 0.605039 8_2:-52844267 Msa1254720:three_prime_UTR
ACCACGGTGGGTTATTCCGG+TGG 0.607349 8_2:-52847607 Msa1254720:CDS
CAGAAAGAGAATTAGGCACA+TGG 0.614433 8_2:-52844198 Msa1254720:three_prime_UTR
TGCAATGAGGATGATGAATG+TGG 0.615527 8_2:+52847789 None:intergenic
CGCTGTTACAATAATTACAA+CGG 0.636052 8_2:+52844143 None:intergenic
GGTGTTTACCTGGTGTTGTG+AGG 0.638048 8_2:-52847630 Msa1254720:CDS
TAAGTGCGGATTGTTGAATG+TGG 0.639292 8_2:+52847913 None:intergenic
TGTACTGATTACCCACATCA+GGG 0.643763 8_2:+52846179 None:intergenic
ACAACTTGGAACATTTCACC+CGG 0.654984 8_2:-52845945 Msa1254720:CDS
TCCCCAAAACTAATTAACCG+TGG 0.658842 8_2:+52846256 None:intergenic
CTGAGGAGTGGGAATAAGTG+CGG 0.659838 8_2:+52847899 None:intergenic
TTCAGGTTGAGTATGATCCA+CGG 0.660705 8_2:-52846273 Msa1254720:intron
GTGGTTAAAAGCGGAAACTG+AGG 0.678163 8_2:+52847882 None:intergenic
ACCTGGTGTTGTGAGGACCA+CGG 0.679057 8_2:-52847623 Msa1254720:CDS
TATAGATACACTGAGCACGA+TGG 0.688383 8_2:+52844269 None:intergenic
TCAACAACGCTTGCAAACCG+CGG 0.689694 8_2:-52847695 Msa1254720:CDS
TGTTGATGAGGAATGCAATG+AGG 0.713497 8_2:+52847776 None:intergenic
GGTGTTGTGAGGACCACGGT+GGG 0.717288 8_2:-52847619 Msa1254720:CDS
TCCACCGGAATAACCCACCG+TGG 0.761833 8_2:+52847606 None:intergenic
TGGTGTTGTGAGGACCACGG+TGG 0.776012 8_2:-52847620 Msa1254720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTTGTAATTATTTTTATTA+AGG + chr8_2:52844789-52844808 None:intergenic 10.0%
!! TTATACATTAAACATTAATT+TGG + chr8_2:52845991-52846010 None:intergenic 10.0%
!! ATTAATTAATGTACAATTTA+GGG + chr8_2:52847163-52847182 None:intergenic 10.0%
!! AATTAATTAATGTACAATTT+AGG + chr8_2:52847164-52847183 None:intergenic 10.0%
!! AAAAATACATACTACATAAA+TGG + chr8_2:52844546-52844565 None:intergenic 15.0%
!!! TTGATGATTTTTTTTTTTCA+TGG + chr8_2:52845486-52845505 None:intergenic 15.0%
!! TTACATTATAAGATGTAATA+TGG + chr8_2:52845509-52845528 None:intergenic 15.0%
!! ATAATGTAATATAACTTTGT+TGG - chr8_2:52845520-52845539 Msa1254720:intron 15.0%
!!! AGATCTATTATTTTTGTTAA+TGG - chr8_2:52845831-52845850 Msa1254720:intron 15.0%
!!! TTGTCAAAATTTTAAGATAT+AGG - chr8_2:52846099-52846118 Msa1254720:intron 15.0%
!!! AATTAATTGATTTGTAATTG+TGG - chr8_2:52847176-52847195 Msa1254720:intron 15.0%
!!! ATCAATGAGATTTTAAAAAA+GGG - chr8_2:52847520-52847539 Msa1254720:intron 15.0%
!! TGATAAAAACAAAAAGAGAT+TGG + chr8_2:52844370-52844389 None:intergenic 20.0%
!!! ATTTTTACTAAAGATGCATT+TGG + chr8_2:52844719-52844738 None:intergenic 20.0%
!!! ATTTTTATTAAGGATGTGTT+CGG + chr8_2:52844779-52844798 None:intergenic 20.0%
!!! ACTTTTCAACAAAATAGTTA+GGG + chr8_2:52844916-52844935 None:intergenic 20.0%
!! AGTGTTAAATATAATTAGCT+TGG + chr8_2:52845017-52845036 None:intergenic 20.0%
!!! GTTAAGTAATTTGAAATCAT+TGG - chr8_2:52845297-52845316 Msa1254720:intron 20.0%
!! ATGAATAGTTAAATAAAACC+TGG + chr8_2:52845335-52845354 None:intergenic 20.0%
!! TTTAACTATTCATCCAATAT+AGG - chr8_2:52845342-52845361 Msa1254720:intron 20.0%
!!! ATTTTTTTGTTACATTCAAC+TGG - chr8_2:52845440-52845459 Msa1254720:intron 20.0%
!!! TTTTATTGATTTTGCCATTA+TGG - chr8_2:52845574-52845593 Msa1254720:intron 20.0%
!! AACAAAAATAATAGATCTGT+TGG + chr8_2:52845829-52845848 None:intergenic 20.0%
!! AAAAATATGTTACACTGTAA+TGG - chr8_2:52846243-52846262 Msa1254720:CDS 20.0%
!!! AAAAATGTAGATTTTACTAC+TGG - chr8_2:52846630-52846649 Msa1254720:intron 20.0%
!!! TTGTGAGTTTTTAAAAATGA+TGG - chr8_2:52846676-52846695 Msa1254720:intron 20.0%
!!! TGTGAGTTTTTAAAAATGAT+GGG - chr8_2:52846677-52846696 Msa1254720:intron 20.0%
!! TAAACTAGAAAAATCCTAAT+AGG + chr8_2:52846865-52846884 None:intergenic 20.0%
!!! GATCAATGAGATTTTAAAAA+AGG - chr8_2:52847519-52847538 Msa1254720:intron 20.0%
!!! TGAAAGTTTCATTTTGGTTT+TGG + chr8_2:52844046-52844065 None:intergenic 25.0%
!!! TTTCTCTGAAAGTTTCATTT+TGG + chr8_2:52844052-52844071 None:intergenic 25.0%
! TCTATAATCGTAAAGAGATT+AGG - chr8_2:52844508-52844527 Msa1254720:CDS 25.0%
! TGATAAACAAGTTGTTCATA+TGG - chr8_2:52844742-52844761 Msa1254720:intron 25.0%
!!! GTGAGAAGTTATTATTTTGA+AGG - chr8_2:52844859-52844878 Msa1254720:intron 25.0%
!! CACTTTTCAACAAAATAGTT+AGG + chr8_2:52844917-52844936 None:intergenic 25.0%
!! GTTGAAAAGTGTATCTAAAT+AGG - chr8_2:52844926-52844945 Msa1254720:intron 25.0%
!! GCTTTTATTAAAGATGGAAT+GGG - chr8_2:52845211-52845230 Msa1254720:intron 25.0%
!!! CATGTTTTGGGAATAATTTA+TGG - chr8_2:52845234-52845253 Msa1254720:intron 25.0%
!!! TTTTGGGAATAATTTATGGT+TGG - chr8_2:52845238-52845257 Msa1254720:intron 25.0%
! ATTGTATTAGCAAACCATAA+TGG + chr8_2:52845591-52845610 None:intergenic 25.0%
! ATTACTGTACTACATTGTAT+AGG + chr8_2:52846070-52846089 None:intergenic 25.0%
! GTTCAAATACATATAAACTG+AGG - chr8_2:52846596-52846615 Msa1254720:intron 25.0%
! ACTATCTATTACTTCCTATT+AGG - chr8_2:52846848-52846867 Msa1254720:intron 25.0%
!!! ATATGAAGTGTTGAAAGTTT+GGG - chr8_2:52846957-52846976 Msa1254720:intron 25.0%
!!! TATTTTTGTCGGTAAATAGA+TGG + chr8_2:52847209-52847228 None:intergenic 25.0%
! TCAGCAATTAGACAAAAAAA+CGG + chr8_2:52847236-52847255 None:intergenic 25.0%
!! AAAGTTCAATTTTCTGTAGT+AGG - chr8_2:52847265-52847284 Msa1254720:intron 25.0%
!!! TCAATTTGCTTTTGGATATT+TGG + chr8_2:52847493-52847512 None:intergenic 25.0%
!!! ATGAGATTTTAAAAAAGGGT+TGG - chr8_2:52847524-52847543 Msa1254720:intron 25.0%
! AATTACAGTTCCCTTAAAAT+CGG + chr8_2:52847550-52847569 None:intergenic 25.0%
! AAAAATATTTCTTCTTCGCA+GGG + chr8_2:52847787-52847806 None:intergenic 25.0%
! AAAAAATATTTCTTCTTCGC+AGG + chr8_2:52847788-52847807 None:intergenic 25.0%
!!! AGTTTTGTTGTGGTTAAAAG+CGG + chr8_2:52844013-52844032 None:intergenic 30.0%
GTATGTGCATTCTTTACTTA+TGG - chr8_2:52844424-52844443 Msa1254720:CDS 30.0%
!! TTATAGGATTAGCTTATGAC+AGG + chr8_2:52844628-52844647 None:intergenic 30.0%
ATGAACACCATATCCATATT+TGG + chr8_2:52844688-52844707 None:intergenic 30.0%
TACTAAAGATGCATTTGGAT+TGG + chr8_2:52844714-52844733 None:intergenic 30.0%
!! AGTCTGAAGAAATTTTGACA+AGG - chr8_2:52844806-52844825 Msa1254720:intron 30.0%
AGTTAGGGAAAAATTATCGA+AGG + chr8_2:52844901-52844920 None:intergenic 30.0%
!! AAACTTGCTAAAATACACCT+AGG + chr8_2:52844961-52844980 None:intergenic 30.0%
!!! TAGGTGTATTTTAGCAAGTT+TGG - chr8_2:52844960-52844979 Msa1254720:intron 30.0%
!!! TTAGCAAGTTTGGTTTTTCT+TGG - chr8_2:52844970-52844989 Msa1254720:intron 30.0%
TTATGAACTTTGTCAGAACA+TGG + chr8_2:52845067-52845086 None:intergenic 30.0%
TGTTCTGACAAAGTTCATAA+AGG - chr8_2:52845067-52845086 Msa1254720:intron 30.0%
GTTCTGACAAAGTTCATAAA+GGG - chr8_2:52845068-52845087 Msa1254720:intron 30.0%
!!! TCATAAAGGGTGTCATTTTT+AGG - chr8_2:52845081-52845100 Msa1254720:intron 30.0%
ACTTCTCCAAACATTCATAA+AGG + chr8_2:52845110-52845129 None:intergenic 30.0%
CCATCTTTAATAAAAGCCTA+GGG + chr8_2:52845208-52845227 None:intergenic 30.0%
TCCATCTTTAATAAAAGCCT+AGG + chr8_2:52845209-52845228 None:intergenic 30.0%
! GGCTTTTATTAAAGATGGAA+TGG - chr8_2:52845210-52845229 Msa1254720:intron 30.0%
TGTTTCACTGTTACCTATAT+TGG + chr8_2:52845358-52845377 None:intergenic 30.0%
!! ACTTTGTTGGTTTACTGATT+TGG - chr8_2:52845533-52845552 Msa1254720:intron 30.0%
!! ATGGTTTGCTAATACAATTC+AGG - chr8_2:52845593-52845612 Msa1254720:intron 30.0%
!!! ATCCACGGTTAATTAGTTTT+GGG - chr8_2:52845625-52845644 Msa1254720:intron 30.0%
! GGGAACTACTTGATATATTT+TGG - chr8_2:52845646-52845665 Msa1254720:intron 30.0%
ACTACTCAAATTCTACAACT+TGG - chr8_2:52845924-52845943 Msa1254720:intron 30.0%
! TTAATTTGGAAAGTCAAACC+TGG + chr8_2:52845977-52845996 None:intergenic 30.0%
ACTACATTGTATAGGTTACT+AGG + chr8_2:52846062-52846081 None:intergenic 30.0%
! ATTCGAGTAACACTATTTTG+AGG - chr8_2:52846359-52846378 Msa1254720:intron 30.0%
! TAAAAATACACCCCCAATTT+TGG - chr8_2:52846465-52846484 Msa1254720:intron 30.0%
TGCATGTCTAAACCAAAATT+GGG + chr8_2:52846480-52846499 None:intergenic 30.0%
ATGCATGTCTAAACCAAAAT+TGG + chr8_2:52846481-52846500 None:intergenic 30.0%
!!! GCCATTATTTTTGGTATTGA+AGG - chr8_2:52846735-52846754 Msa1254720:intron 30.0%
GCCTTCAATACCAAAAATAA+TGG + chr8_2:52846739-52846758 None:intergenic 30.0%
GTATTGAAGGCAATTCTATT+TGG - chr8_2:52846748-52846767 Msa1254720:intron 30.0%
!! GATATGAAGTGTTGAAAGTT+TGG - chr8_2:52846956-52846975 Msa1254720:intron 30.0%
CTTGAGAAGAGATTATAAAG+AGG + chr8_2:52847028-52847047 None:intergenic 30.0%
!! AAAGCCAACATAGTTACTTT+TGG - chr8_2:52847087-52847106 Msa1254720:intron 30.0%
GTTTCCAAAAGTAACTATGT+TGG + chr8_2:52847094-52847113 None:intergenic 30.0%
! TCACTGAGCTTTAACTTATT+TGG - chr8_2:52847137-52847156 Msa1254720:intron 30.0%
!!! AAAACGGACTCTATTTTTGT+CGG + chr8_2:52847220-52847239 None:intergenic 30.0%
!!! GTTTTTTTGTCTAATTGCTG+AGG - chr8_2:52847235-52847254 Msa1254720:intron 30.0%
! TTTTCTGTAGTAGGTGAAAA+AGG - chr8_2:52847274-52847293 Msa1254720:intron 30.0%
!! TTTGCTTTTGGATATTTGGA+GGG + chr8_2:52847489-52847508 None:intergenic 30.0%
!! ATTTGCTTTTGGATATTTGG+AGG + chr8_2:52847490-52847509 None:intergenic 30.0%
!! TCTTTGCATCAATTTGCTTT+TGG + chr8_2:52847501-52847520 None:intergenic 30.0%
!! GATTTTAAGGGAACTGTAAT+TGG - chr8_2:52847549-52847568 Msa1254720:intron 30.0%
ATGTTCATATTGTCATTCTG+TGG - chr8_2:52847591-52847610 Msa1254720:CDS 30.0%
GAAATACCAGAAAGAGAATT+AGG - chr8_2:52847678-52847697 Msa1254720:CDS 30.0%
CGGAGTAGTATAATCATATT+CGG + chr8_2:52847723-52847742 None:intergenic 30.0%
CGCTGTTACAATAATTACAA+CGG + chr8_2:52847743-52847762 None:intergenic 30.0%
CATGTATGAACGTAATTAGT+TGG + chr8_2:52847886-52847905 None:intergenic 30.0%
GGAGAGAATGTAGTTATAGT+TGG + chr8_2:52844076-52844095 None:intergenic 35.0%
TACAGTTTGCATTGTTGATG+AGG + chr8_2:52844122-52844141 None:intergenic 35.0%
ATCACCAAAGCTTCGATATT+CGG + chr8_2:52844316-52844335 None:intergenic 35.0%
GGTTAGACCAAATATGGATA+TGG - chr8_2:52844678-52844697 Msa1254720:intron 35.0%
! TAAATAGGCTCTTTTGTCCT+AGG - chr8_2:52844941-52844960 Msa1254720:intron 35.0%
!!! AGTTTGGTTTTTCTTGGTCT+TGG - chr8_2:52844976-52844995 Msa1254720:intron 35.0%
!! TCTTGGTCTTGGATTGTATT+TGG - chr8_2:52844987-52845006 Msa1254720:intron 35.0%
!! CTTGGTCTTGGATTGTATTT+GGG - chr8_2:52844988-52845007 Msa1254720:intron 35.0%
AGGCATCCTTTATGAATGTT+TGG - chr8_2:52845101-52845120 Msa1254720:intron 35.0%
! AGAAGTTTTGCATGCTTCTT+AGG - chr8_2:52845124-52845143 Msa1254720:intron 35.0%
! CCCTAGGCTTTTATTAAAGA+TGG - chr8_2:52845205-52845224 Msa1254720:intron 35.0%
TGGGAATAATTTATGGTTGG+CGG - chr8_2:52845241-52845260 Msa1254720:intron 35.0%
GAAATCATTGGTCCATGAAA+AGG - chr8_2:52845309-52845328 Msa1254720:intron 35.0%
!! AATAAAACCTGGCCTTTTCA+TGG + chr8_2:52845324-52845343 None:intergenic 35.0%
! GAATCAACACCACTACATTT+TGG + chr8_2:52845388-52845407 None:intergenic 35.0%
!! AAATGTAGTGGTGTTGATTC+TGG - chr8_2:52845388-52845407 Msa1254720:intron 35.0%
!! GATCCACGGTTAATTAGTTT+TGG - chr8_2:52845624-52845643 Msa1254720:intron 35.0%
!!! TCCACGGTTAATTAGTTTTG+GGG - chr8_2:52845626-52845645 Msa1254720:intron 35.0%
TGGCATGAGATTGAATATGA+AGG + chr8_2:52845772-52845791 None:intergenic 35.0%
TGGAACTGAAGAATCAAGAA+TGG - chr8_2:52845851-52845870 Msa1254720:intron 35.0%
ACTCAGATGTATGCAAACAT+AGG + chr8_2:52846039-52846058 None:intergenic 35.0%
AAACAAGCTAGAGAACACAT+AGG + chr8_2:52846214-52846233 None:intergenic 35.0%
!! TATGTGTTCTCTAGCTTGTT+TGG - chr8_2:52846213-52846232 Msa1254720:CDS 35.0%
!! GTTACACTGTAATGGTTTTG+AGG - chr8_2:52846251-52846270 Msa1254720:CDS 35.0%
! GCAAGTACGAATGTATTTTG+AGG - chr8_2:52846285-52846304 Msa1254720:intron 35.0%
!! GTACGAATGTATTTTGAGGA+AGG - chr8_2:52846289-52846308 Msa1254720:intron 35.0%
!!! TGTATTTTGAGGAAGGCATT+AGG - chr8_2:52846296-52846315 Msa1254720:intron 35.0%
ATACTGAAATACGACTCTCA+CGG + chr8_2:52846327-52846346 None:intergenic 35.0%
!! TAACACTATTTTGAGGACAG+TGG - chr8_2:52846366-52846385 Msa1254720:intron 35.0%
!! AACACTATTTTGAGGACAGT+GGG - chr8_2:52846367-52846386 Msa1254720:intron 35.0%
GCATACTCTTATTCTTGTGT+GGG + chr8_2:52846401-52846420 None:intergenic 35.0%
! TACTGCGGCATTCATATTTT+TGG + chr8_2:52846423-52846442 None:intergenic 35.0%
CCAATACTCAATCAATACTG+CGG + chr8_2:52846438-52846457 None:intergenic 35.0%
!! TTGGGGGTGTATTTTTATAG+TGG + chr8_2:52846462-52846481 None:intergenic 35.0%
CATGTCTAAACCAAAATTGG+GGG + chr8_2:52846478-52846497 None:intergenic 35.0%
GCATGTCTAAACCAAAATTG+GGG + chr8_2:52846479-52846498 None:intergenic 35.0%
GGCCTATGACAAAGAATATT+GGG + chr8_2:52846520-52846539 None:intergenic 35.0%
AGGCCTATGACAAAGAATAT+TGG + chr8_2:52846521-52846540 None:intergenic 35.0%
! ACTGGCTTAAGGTTTAAGTA+AGG + chr8_2:52846541-52846560 None:intergenic 35.0%
! TGTAGGTCTGCCATTATTTT+TGG - chr8_2:52846726-52846745 Msa1254720:intron 35.0%
GTTTGTGTTGTGCATTCAAA+CGG - chr8_2:52846821-52846840 Msa1254720:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr8_2:52846981-52847000 Msa1254720:intron 35.0%
GAGAAGAGATTATAAAGAGG+AGG + chr8_2:52847025-52847044 None:intergenic 35.0%
!! TAACTATGTTGGCTTTGATG+GGG + chr8_2:52847083-52847102 None:intergenic 35.0%
!! GTAACTATGTTGGCTTTGAT+GGG + chr8_2:52847084-52847103 None:intergenic 35.0%
!! AGTAACTATGTTGGCTTTGA+TGG + chr8_2:52847085-52847104 None:intergenic 35.0%
ACATTCCTTCTTCAGCTAAT+TGG - chr8_2:52847391-52847410 Msa1254720:intron 35.0%
CATTCCTTCTTCAGCTAATT+GGG - chr8_2:52847392-52847411 Msa1254720:intron 35.0%
AACCTGGCAACAAAATTGAA+TGG - chr8_2:52847445-52847464 Msa1254720:intron 35.0%
! ATCCATTCAATTTTGTTGCC+AGG + chr8_2:52847450-52847469 None:intergenic 35.0%
!! GAACTGTAATTGGCCTTTAA+GGG - chr8_2:52847559-52847578 Msa1254720:CDS 35.0%
CCTCAAATGTAGTCATCATA+TGG + chr8_2:52847844-52847863 None:intergenic 35.0%
CCATATGATGACTACATTTG+AGG - chr8_2:52847841-52847860 Msa1254720:exon 35.0%
ACGTAATTAGTTGGCAATCT+GGG + chr8_2:52847877-52847896 None:intergenic 35.0%
AACGTAATTAGTTGGCAATC+TGG + chr8_2:52847878-52847897 None:intergenic 35.0%
! TAAGTGCGGATTGTTGAATG+TGG + chr8_2:52843973-52843992 None:intergenic 40.0%
!!! TGTTGCGTGAAGTTTTGTTG+TGG + chr8_2:52844023-52844042 None:intergenic 40.0%
TGCAATGAGGATGATGAATG+TGG + chr8_2:52844097-52844116 None:intergenic 40.0%
! TGTTGATGAGGAATGCAATG+AGG + chr8_2:52844110-52844129 None:intergenic 40.0%
AAGCTTCGATATTCGGGATT+AGG + chr8_2:52844309-52844328 None:intergenic 40.0%
AATCCCGAATATCGAAGCTT+TGG - chr8_2:52844309-52844328 Msa1254720:three_prime_UTR 40.0%
TCACCAAAGCTTCGATATTC+GGG + chr8_2:52844315-52844334 None:intergenic 40.0%
CTCATCTCAACAAACTCTCA+AGG + chr8_2:52844580-52844599 None:intergenic 40.0%
ATTGAGTAGAGAGCAAGTTG+TGG - chr8_2:52844601-52844620 Msa1254720:intron 40.0%
ACATAATCAGCGCGTTTCAA+CGG + chr8_2:52844653-52844672 None:intergenic 40.0%
TCAGGAGGTTAGACCAAATA+TGG - chr8_2:52844672-52844691 Msa1254720:intron 40.0%
TATCGAAGGATCTTGCATTG+AGG + chr8_2:52844887-52844906 None:intergenic 40.0%
TGCTTCTTAGGAATCTCAGA+AGG - chr8_2:52845136-52845155 Msa1254720:intron 40.0%
! AAAAGACACTAGTCTAGCCA+TGG + chr8_2:52845162-52845181 None:intergenic 40.0%
! GACTAGTGTCTTTTATCACC+TGG - chr8_2:52845168-52845187 Msa1254720:intron 40.0%
AGGGTTATACATGTCAATCC+AGG + chr8_2:52845189-52845208 None:intergenic 40.0%
GGATTGACATGTATAACCCT+AGG - chr8_2:52845189-52845208 Msa1254720:intron 40.0%
! AAGATGGAATGGGCATGTTT+TGG - chr8_2:52845221-52845240 Msa1254720:intron 40.0%
! AGATGGAATGGGCATGTTTT+GGG - chr8_2:52845222-52845241 Msa1254720:intron 40.0%
CATGCTTCACCAAAATGTAG+TGG - chr8_2:52845376-52845395 Msa1254720:intron 40.0%
! GTTACATTCAACTGGTGTTG+TGG - chr8_2:52845448-52845467 Msa1254720:intron 40.0%
!! CTGATTTGGTGAGATGAACT+TGG - chr8_2:52845547-52845566 Msa1254720:intron 40.0%
!! TTCAGGTTGAGTATGATCCA+CGG - chr8_2:52845610-52845629 Msa1254720:intron 40.0%
TCCCCAAAACTAATTAACCG+TGG + chr8_2:52845630-52845649 None:intergenic 40.0%
!! TGTACTGATTACCCACATCA+GGG + chr8_2:52845707-52845726 None:intergenic 40.0%
ATATCACAAAGAACTGCAGC+TGG + chr8_2:52845748-52845767 None:intergenic 40.0%
GTAGTTCAGTACTTAGCACT+TGG + chr8_2:52845792-52845811 None:intergenic 40.0%
ACAACTTGGAACATTTCACC+CGG - chr8_2:52845938-52845957 Msa1254720:CDS 40.0%
AACACATAGGACTCGGATTA+GGG + chr8_2:52846201-52846220 None:intergenic 40.0%
GGCATACTCTTATTCTTGTG+TGG + chr8_2:52846402-52846421 None:intergenic 40.0%
!! CCGCAGTATTGATTGAGTAT+TGG - chr8_2:52846435-52846454 Msa1254720:intron 40.0%
CGCCCAATATTCTTTGTCAT+AGG - chr8_2:52846515-52846534 Msa1254720:intron 40.0%
ACTTAAACCTTAAGCCAGTG+AGG - chr8_2:52846542-52846561 Msa1254720:intron 40.0%
CTTAAACCTTAAGCCAGTGA+GGG - chr8_2:52846543-52846562 Msa1254720:intron 40.0%
TTTGTATATTCTGCCCTCAC+TGG + chr8_2:52846559-52846578 None:intergenic 40.0%
AGGGCAGAATATACAAACAG+TGG - chr8_2:52846562-52846581 Msa1254720:intron 40.0%
GGGCAGAATATACAAACAGT+GGG - chr8_2:52846563-52846582 Msa1254720:intron 40.0%
ACTTGCACTTTCCTCACTAT+AGG - chr8_2:52846703-52846722 Msa1254720:intron 40.0%
ACTTTCCTCACTATAGGTGT+AGG - chr8_2:52846709-52846728 Msa1254720:intron 40.0%
GAATGCACAACACAAACTAG+TGG + chr8_2:52846818-52846837 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr8_2:52846983-52847002 None:intergenic 40.0%
! AGAGTACTATCTATCCGATG+TGG - chr8_2:52847046-52847065 Msa1254720:intron 40.0%
GAGTACTATCTATCCGATGT+GGG - chr8_2:52847047-52847066 Msa1254720:intron 40.0%
ATGTCAGTCAGTGATCTAAC+AGG + chr8_2:52847324-52847343 None:intergenic 40.0%
!!! AAAAGGGTTGGCCGATTTTA+AGG - chr8_2:52847536-52847555 Msa1254720:intron 40.0%
!!! AAAGGGTTGGCCGATTTTAA+GGG - chr8_2:52847537-52847556 Msa1254720:intron 40.0%
!! GGAACTGTAATTGGCCTTTA+AGG - chr8_2:52847558-52847577 Msa1254720:CDS 40.0%
ACATGAGCAACTTCCCTTAA+AGG + chr8_2:52847575-52847594 None:intergenic 40.0%
TATAGATACACTGAGCACGA+TGG + chr8_2:52847617-52847636 None:intergenic 40.0%
ATCGTGCTCAGTGTATCTAT+AGG - chr8_2:52847616-52847635 Msa1254720:CDS 40.0%
CATGTGCCTAATTCTCTTTC+TGG + chr8_2:52847687-52847706 None:intergenic 40.0%
CAGAAAGAGAATTAGGCACA+TGG - chr8_2:52847685-52847704 Msa1254720:CDS 40.0%
! TTAGGCACATGGTTTTTGCA+CGG - chr8_2:52847696-52847715 Msa1254720:CDS 40.0%
AAAAGCGGAAACTGAGGAGT+GGG + chr8_2:52843998-52844017 None:intergenic 45.0%
TAAAAGCGGAAACTGAGGAG+TGG + chr8_2:52843999-52844018 None:intergenic 45.0%
GTGGTTAAAAGCGGAAACTG+AGG + chr8_2:52844004-52844023 None:intergenic 45.0%
TGCAAACTGTATCCGATTCC+CGG - chr8_2:52844131-52844150 Msa1254720:three_prime_UTR 45.0%
! GTTTGCAAGCGTTGTTGATC+GGG + chr8_2:52844186-52844205 None:intergenic 45.0%
! GGTTTGCAAGCGTTGTTGAT+CGG + chr8_2:52844187-52844206 None:intergenic 45.0%
TATTCGCTCTCGGAAGTTTC+TGG - chr8_2:52844211-52844230 Msa1254720:three_prime_UTR 45.0%
TAAACACCCGAACACAGCTT+CGG + chr8_2:52844241-52844260 None:intergenic 45.0%
GGGATTAGGTTTAGATCCAC+CGG + chr8_2:52844295-52844314 None:intergenic 45.0%
! CTTTGGTGATCACGCTGAAT+CGG - chr8_2:52844326-52844345 Msa1254720:exon 45.0%
CATAATCAGCGCGTTTCAAC+GGG + chr8_2:52844652-52844671 None:intergenic 45.0%
!! TGAAACGCGCTGATTATGTC+AGG - chr8_2:52844654-52844673 Msa1254720:intron 45.0%
TTAGGAATCTCAGAAGGCCA+TGG - chr8_2:52845142-52845161 Msa1254720:intron 45.0%
!! CTGTACTGATTACCCACATC+AGG + chr8_2:52845708-52845727 None:intergenic 45.0%
CTGATGTGGGTAATCAGTAC+AGG - chr8_2:52845706-52845725 Msa1254720:intron 45.0%
TGTGGGTAATCAGTACAGGT+AGG - chr8_2:52845710-52845729 Msa1254720:intron 45.0%
! CGGATTAGGGTGATTAGAAG+TGG + chr8_2:52846188-52846207 None:intergenic 45.0%
GAACACATAGGACTCGGATT+AGG + chr8_2:52846202-52846221 None:intergenic 45.0%
GCTAGAGAACACATAGGACT+CGG + chr8_2:52846208-52846227 None:intergenic 45.0%
!! GTTCTCTAGCTTGTTTGGTG+AGG - chr8_2:52846218-52846237 Msa1254720:CDS 45.0%
CTCTTATTCTTGTGTGGGCA+TGG + chr8_2:52846396-52846415 None:intergenic 45.0%
ACAAACAGTGGGTCAGTAGT+AGG - chr8_2:52846574-52846593 Msa1254720:intron 45.0%
TGTGTTGTGCATTCAAACGG+TGG - chr8_2:52846824-52846843 Msa1254720:intron 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr8_2:52846993-52847012 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr8_2:52846990-52847009 Msa1254720:intron 45.0%
GGTTCCCAATTAGCTGAAGA+AGG + chr8_2:52847399-52847418 None:intergenic 45.0%
CTGAGGAGTGGGAATAAGTG+CGG + chr8_2:52843987-52844006 None:intergenic 50.0%
ACTGTATCCGATTCCCGGAT+CGG - chr8_2:52844136-52844155 Msa1254720:three_prime_UTR 50.0%
! TTGTTGATCGGGTTGTTCGC+GGG + chr8_2:52844175-52844194 None:intergenic 50.0%
! GTTGTTGATCGGGTTGTTCG+CGG + chr8_2:52844176-52844195 None:intergenic 50.0%
TCAACAACGCTTGCAAACCG+CGG - chr8_2:52844188-52844207 Msa1254720:three_prime_UTR 50.0%
TGGAGATCCGAAGCTGTGTT+CGG - chr8_2:52844231-52844250 Msa1254720:three_prime_UTR 50.0%
!! GGTGTTTACCTGGTGTTGTG+AGG - chr8_2:52844253-52844272 Msa1254720:three_prime_UTR 50.0%
! TGATCACGCTGAATCGGTTC+AGG - chr8_2:52844332-52844351 Msa1254720:exon 50.0%
!! AACGCGCTGATTATGTCAGG+AGG - chr8_2:52844657-52844676 Msa1254720:intron 50.0%
CATTGGTCCATGAAAAGGCC+AGG - chr8_2:52845314-52845333 Msa1254720:intron 50.0%
TTTGGTCAAGCCATGATCCC+AGG - chr8_2:52845664-52845683 Msa1254720:intron 50.0%
GGGTAATCAGTACAGGTAGG+AGG - chr8_2:52845713-52845732 Msa1254720:intron 50.0%
GGCTTCTGTCAGCAAAGAAC+AGG - chr8_2:52845872-52845891 Msa1254720:intron 50.0%
GCAAAGAACAGGAGCAAACC+AGG - chr8_2:52845883-52845902 Msa1254720:intron 50.0%
! CACAATGCTGCTTCTTGACC+TGG + chr8_2:52845904-52845923 None:intergenic 50.0%
GAAAGTCAAACCTGGTGCTC+AGG + chr8_2:52845969-52845988 None:intergenic 50.0%
!! ATTCTGCCCTCACTGGCTTA+AGG + chr8_2:52846552-52846571 None:intergenic 50.0%
GCAGACCTACACCTATAGTG+AGG + chr8_2:52846717-52846736 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+CGG - chr8_2:52846995-52847014 Msa1254720:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr8_2:52847063-52847082 None:intergenic 50.0%
!! CTATGTTGGCTTTGATGGGG+TGG + chr8_2:52847080-52847099 None:intergenic 50.0%
AATTGGGAACCTGCCTGAAG+AGG - chr8_2:52847408-52847427 Msa1254720:intron 50.0%
TTCTTCTTCGCAGGGTGAGT+GGG + chr8_2:52847779-52847798 None:intergenic 50.0%
TTTCTTCTTCGCAGGGTGAG+TGG + chr8_2:52847780-52847799 None:intergenic 50.0%
CTGTATCCGATTCCCGGATC+GGG - chr8_2:52844137-52844156 Msa1254720:three_prime_UTR 55.0%
CAAACCGCGGTATTCGCTCT+CGG - chr8_2:52844201-52844220 Msa1254720:three_prime_UTR 55.0%
ACTTCCGAGAGCGAATACCG+CGG + chr8_2:52844208-52844227 None:intergenic 55.0%
GGAGATCCGAAGCTGTGTTC+GGG - chr8_2:52844232-52844251 Msa1254720:three_prime_UTR 55.0%
GCTGTGTTCGGGTGTTTACC+TGG - chr8_2:52844243-52844262 Msa1254720:three_prime_UTR 55.0%
!! ACCTGGTGTTGTGAGGACCA+CGG - chr8_2:52844260-52844279 Msa1254720:three_prime_UTR 55.0%
!! AGGACCACGGTGGGTTATTC+CGG - chr8_2:52844273-52844292 Msa1254720:three_prime_UTR 55.0%
! GCGCGTTTCAACGGGCTTAT+AGG + chr8_2:52844644-52844663 None:intergenic 55.0%
ATGGTTGGCGGTTCACGTCT+TGG - chr8_2:52845253-52845272 Msa1254720:intron 55.0%
TTGGCGGTTCACGTCTTGGA+TGG - chr8_2:52845257-52845276 Msa1254720:intron 55.0%
CAAACACCTGCCTGGGATCA+TGG + chr8_2:52845677-52845696 None:intergenic 55.0%
CATGATCCCAGGCAGGTGTT+TGG - chr8_2:52845675-52845694 Msa1254720:intron 55.0%
TTTGGCCAAGGCCCTGATGT+GGG - chr8_2:52845693-52845712 Msa1254720:intron 55.0%
GATTACCCACATCAGGGCCT+TGG + chr8_2:52845701-52845720 None:intergenic 55.0%
GATCTCTCGAGCTCCTCTTC+AGG + chr8_2:52847424-52847443 None:intergenic 55.0%
GGAGCTCGAGAGATCAAACC+TGG - chr8_2:52847429-52847448 Msa1254720:intron 55.0%
! TTGATCGGGTTGTTCGCGGG+CGG + chr8_2:52844172-52844191 None:intergenic 60.0%
ACCGTGGTCCTCACAACACC+AGG + chr8_2:52844264-52844283 None:intergenic 60.0%
!! TGGTGTTGTGAGGACCACGG+TGG - chr8_2:52844263-52844282 Msa1254720:three_prime_UTR 60.0%
! GGTGTTGTGAGGACCACGGT+GGG - chr8_2:52844264-52844283 Msa1254720:three_prime_UTR 60.0%
!! ACCACGGTGGGTTATTCCGG+TGG - chr8_2:52844276-52844295 Msa1254720:three_prime_UTR 60.0%
TCCACCGGAATAACCCACCG+TGG + chr8_2:52844280-52844299 None:intergenic 60.0%
GTCAAGCCATGATCCCAGGC+AGG - chr8_2:52845668-52845687 Msa1254720:intron 60.0%
CCTTGGCCAAACACCTGCCT+GGG + chr8_2:52845684-52845703 None:intergenic 60.0%
GTTTGGCCAAGGCCCTGATG+TGG - chr8_2:52845692-52845711 Msa1254720:intron 60.0%
GCACTCCGCACCTTACAAGC+CGG + chr8_2:52847003-52847022 None:intergenic 60.0%
TCTCGAGCTCCTCTTCAGGC+AGG + chr8_2:52847420-52847439 None:intergenic 60.0%
GAGCGACCCGATCCGGGAAT+CGG + chr8_2:52844146-52844165 None:intergenic 65.0%
! TGATCGGGTTGTTCGCGGGC+GGG + chr8_2:52844171-52844190 None:intergenic 65.0%
CCCAGGCAGGTGTTTGGCCA+AGG - chr8_2:52845681-52845700 Msa1254720:intron 65.0%
GCCTTGGCCAAACACCTGCC+TGG + chr8_2:52845685-52845704 None:intergenic 65.0%
ACCTGGTGCTCAGGCTCTGC+CGG + chr8_2:52845960-52845979 None:intergenic 65.0%
! CGGGTTGAGCGACCCGATCC+GGG + chr8_2:52844152-52844171 None:intergenic 70.0%
! GCGGGTTGAGCGACCCGATC+CGG + chr8_2:52844153-52844172 None:intergenic 70.0%
CCTGGTGCTCAGGCTCTGCC+GGG + chr8_2:52845959-52845978 None:intergenic 70.0%
CCCGGCAGAGCCTGAGCACC+AGG - chr8_2:52845956-52845975 Msa1254720:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 52843963 52847942 52843963 ID=Msa1254720;Name=Msa1254720
chr8_2 mRNA 52843963 52847942 52843963 ID=Msa1254720-mRNA-1;Parent=Msa1254720;Name=Msa1254720-mRNA-1;_AED=0.12;_eAED=0.12;_QI=91|1|1|1|1|1|4|375|251
chr8_2 exon 52843963 52844535 52843963 ID=Msa1254720-mRNA-1:exon:16303;Parent=Msa1254720-mRNA-1
chr8_2 exon 52845928 52846072 52845928 ID=Msa1254720-mRNA-1:exon:16302;Parent=Msa1254720-mRNA-1
chr8_2 exon 52846178 52846290 52846178 ID=Msa1254720-mRNA-1:exon:16301;Parent=Msa1254720-mRNA-1
chr8_2 exon 52847552 52847942 52847552 ID=Msa1254720-mRNA-1:exon:16300;Parent=Msa1254720-mRNA-1
chr8_2 five_prime_UTR 52847852 52847942 52847852 ID=Msa1254720-mRNA-1:five_prime_utr;Parent=Msa1254720-mRNA-1
chr8_2 CDS 52847552 52847851 52847552 ID=Msa1254720-mRNA-1:cds;Parent=Msa1254720-mRNA-1
chr8_2 CDS 52846178 52846290 52846178 ID=Msa1254720-mRNA-1:cds;Parent=Msa1254720-mRNA-1
chr8_2 CDS 52845928 52846072 52845928 ID=Msa1254720-mRNA-1:cds;Parent=Msa1254720-mRNA-1
chr8_2 CDS 52844338 52844535 52844338 ID=Msa1254720-mRNA-1:cds;Parent=Msa1254720-mRNA-1
chr8_2 three_prime_UTR 52843963 52844337 52843963 ID=Msa1254720-mRNA-1:three_prime_utr;Parent=Msa1254720-mRNA-1
Gene Sequence

>Msa1254720

ATGAAACTTTCAGAGAAAACCAACTATAACTACATTCTCTCCACATTCATCATCCTCATTGCATTCCTCATCAACAATGCAAACTGTATCCGATTCCCGGATCGGGTCGCTCAACCCGCCCGCGAACAACCCGATCAACAACGCTTGCAAACCGCGGTATTCGCTCTCGGAAGTTTCTGGAGATCCGAAGCTGTGTTCGGGTGTTTACCTGGTGTTGTGAGGACCACGGTGGGTTATTCCGGTGGATCTAAACCTAATCCCGAATATCGAAGCTTTGGTGATCACGCTGAATCGGTTCAGGTTGAGTATGATCCACGGTTAATTAGTTTTGGGGAACTACTTGATATATTTTGGTCAAGCCATGATCCCAGGCAGGTGTTTGGCCAAGGCCCTGATGTGGGTAATCAGTACAGATCTATTATTTTTGTTAATGGAACTGAAGAATCAAGAATGGCTTCTGTCAGCAAAGAACAGGAGCAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAAATTCTACAACTTGGAACATTTCACCCGGCAGAGCCTGAGCACCAGAAATTTGAACTCAAGCAAAATACATTCCTTCTTCAGCTAATTGGGAACCTGCCTGAAGAGGAGCTCGAGAGATCAAACCTGGCAACAAAATTGAATGGATATGTAGCTGAGCTTTGCCCTCCAAATATCCAAAAGCAAATTGATGCAAAGATCAATGAGATTTTAAAAAAGGGTTGGCCGATTTTAAGGGAACTGTAA
Protein sequence

>Msa1254720

MKLSEKTNYNYILSTFIILIAFLINNANCIRFPDRVAQPAREQPDQQRLQTAVFALGSFWRSEAVFGCLPGVVRTTVGYSGGSKPNPEYRSFGDHAESVQVEYDPRLISFGELLDIFWSSHDPRQVFGQGPDVGNQYRSIIFVNGTEESRMASVSKEQEQTRSRSSIVTTQILQLGTFHPAEPEHQKFELKQNTFLLQLIGNLPEEELERSNLATKLNGYVAELCPPNIQKQIDAKINEILKKGWPILREL*